Spo24238 (gene)

Overview
NameSpo24238
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein, putative
Locationchr2 : 47425724 .. 47426707 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCATTGATTAGAACTCCAGTACCCAATGTTACTGTTGCTGGATTCCGTTATCAGAGCCAGAAACATAGGAGGTTGACCAATAATCATGTTGGATTTTCTCTTCCAAAGCTCCATTTAAATCGCCTTTCAGTTTGCTGCTCAAAGTTGACACCGTGGGAACCCACTCCACTTACGTATGCACCCACTGATGAAGCTGAACCCGAGATTTTAGAAGAAACTCCCAACTTATTTGACACCCTAAAGTTCGAGGGCACTGCAGCTACACCAGCTGCTGAATCTGAAAAATTAGCTCAAAAAACCAGCAACAAATCACAGGGGGCAGGCTTTCTGAAATGGCCATTATGGATTCTGGGTCCGGGATTCCTTCTCGTAACTGGCATGGTACCGACTTTGTGGCTACCAATATCGTCCATATTCCTCGGGCCAAACATTGCTAGCTTACTTTCCCTTGTTGGGCTAGATTGCATCTTCAATATCGGTGCAATGCTGTTCCTCCTGATGGCCCATTCTACAACTCAACCAAAAGATCCAATGGAAGCACCCCAAAGCAAGGCTCCTCTCAGTTACCGGTTCTGGAACATGTTTGCTTCAATAATAGGCTACGCTATCCCGTTGGCATTGCTGTATGGCTCACATAAGGGCCTCCTCCAACCACAGCTTGCACCCATCTCATACATGGTACTTTTAGGCCCTTACCTTCTTCTTCTGTCAGTGCAGATGTTGACAGAATTGCTGACTTGGCATTGGCAATCACCCGTGTGGCTTGTAACTCCTGTTGTATATGAGGCATATCGAGTGCTGCAGCTCATGAGGGGTTTGAAGCTTAGTGCAGAGATAAGTGCACCTGCATGGATGATGCATACTATAAGGGGGTTGGTGTGTTGGTGGGTGCTCATTCTTGGTTTGCAGCTCATGAGGGTTGCTTGGTATGCCGGGTTCTCTGCTAAAACGCGTAAAGAGCAGAGATCATACCCGTGA

mRNA sequence

ATGTCATCATTGATTAGAACTCCAGTACCCAATGTTACTGTTGCTGGATTCCGTTATCAGAGCCAGAAACATAGGAGGTTGACCAATAATCATGTTGGATTTTCTCTTCCAAAGCTCCATTTAAATCGCCTTTCAGTTTGCTGCTCAAAGTTGACACCGTGGGAACCCACTCCACTTACGTATGCACCCACTGATGAAGCTGAACCCGAGATTTTAGAAGAAACTCCCAACTTATTTGACACCCTAAAGTTCGAGGGCACTGCAGCTACACCAGCTGCTGAATCTGAAAAATTAGCTCAAAAAACCAGCAACAAATCACAGGGGGCAGGCTTTCTGAAATGGCCATTATGGATTCTGGGTCCGGGATTCCTTCTCGTAACTGGCATGGTACCGACTTTGTGGCTACCAATATCGTCCATATTCCTCGGGCCAAACATTGCTAGCTTACTTTCCCTTGTTGGGCTAGATTGCATCTTCAATATCGGTGCAATGCTGTTCCTCCTGATGGCCCATTCTACAACTCAACCAAAAGATCCAATGGAAGCACCCCAAAGCAAGGCTCCTCTCAGTTACCGGTTCTGGAACATGTTTGCTTCAATAATAGGCTACGCTATCCCGTTGGCATTGCTGTATGGCTCACATAAGGGCCTCCTCCAACCACAGCTTGCACCCATCTCATACATGGTACTTTTAGGCCCTTACCTTCTTCTTCTGTCAGTGCAGATGTTGACAGAATTGCTGACTTGGCATTGGCAATCACCCGTGTGGCTTGTAACTCCTGTTGTATATGAGGCATATCGAGTGCTGCAGCTCATGAGGGGTTTGAAGCTTAGTGCAGAGATAAGTGCACCTGCATGGATGATGCATACTATAAGGGGGTTGGTGTGTTGGTGGGTGCTCATTCTTGGTTTGCAGCTCATGAGGGTTGCTTGGTATGCCGGGTTCTCTGCTAAAACGCGTAAAGAGCAGAGATCATACCCGTGA

Coding sequence (CDS)

ATGTCATCATTGATTAGAACTCCAGTACCCAATGTTACTGTTGCTGGATTCCGTTATCAGAGCCAGAAACATAGGAGGTTGACCAATAATCATGTTGGATTTTCTCTTCCAAAGCTCCATTTAAATCGCCTTTCAGTTTGCTGCTCAAAGTTGACACCGTGGGAACCCACTCCACTTACGTATGCACCCACTGATGAAGCTGAACCCGAGATTTTAGAAGAAACTCCCAACTTATTTGACACCCTAAAGTTCGAGGGCACTGCAGCTACACCAGCTGCTGAATCTGAAAAATTAGCTCAAAAAACCAGCAACAAATCACAGGGGGCAGGCTTTCTGAAATGGCCATTATGGATTCTGGGTCCGGGATTCCTTCTCGTAACTGGCATGGTACCGACTTTGTGGCTACCAATATCGTCCATATTCCTCGGGCCAAACATTGCTAGCTTACTTTCCCTTGTTGGGCTAGATTGCATCTTCAATATCGGTGCAATGCTGTTCCTCCTGATGGCCCATTCTACAACTCAACCAAAAGATCCAATGGAAGCACCCCAAAGCAAGGCTCCTCTCAGTTACCGGTTCTGGAACATGTTTGCTTCAATAATAGGCTACGCTATCCCGTTGGCATTGCTGTATGGCTCACATAAGGGCCTCCTCCAACCACAGCTTGCACCCATCTCATACATGGTACTTTTAGGCCCTTACCTTCTTCTTCTGTCAGTGCAGATGTTGACAGAATTGCTGACTTGGCATTGGCAATCACCCGTGTGGCTTGTAACTCCTGTTGTATATGAGGCATATCGAGTGCTGCAGCTCATGAGGGGTTTGAAGCTTAGTGCAGAGATAAGTGCACCTGCATGGATGATGCATACTATAAGGGGGTTGGTGTGTTGGTGGGTGCTCATTCTTGGTTTGCAGCTCATGAGGGTTGCTTGGTATGCCGGGTTCTCTGCTAAAACGCGTAAAGAGCAGAGATCATACCCGTGA

Protein sequence

MSSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLTYAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILGPGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPMEAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSVQMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVLILGLQLMRVAWYAGFSAKTRKEQRSYP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24238.1Spo24238.1mRNA


Homology
[Close]
BLAST of Spo24238.1 vs. NCBI nr
Match: gi|902230067|gb|KNA21697.1| (hypothetical protein SOVF_040260 [Spinacia oleracea])

HSP 1 Score: 656.8 bits (1693), Expect = 2.000e-185
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 

		  

Query: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLT 60
           MSSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLT
Sbjct: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLT 60

Query: 61  YAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILG 120
           YAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILG
Sbjct: 61  YAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILG 120

Query: 121 PGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPM 180
           PGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPM
Sbjct: 121 PGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPM 180

Query: 181 EAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSV 240
           EAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSV
Sbjct: 181 EAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSV 240

Query: 241 QMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVL 300
           QMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVL
Sbjct: 241 QMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVL 300

Query: 301 ILGLQLMRVAWYAGFSAKTRKEQRSYP 328
           ILGLQLMRVAWYAGFSAKTRKEQRSYP
Sbjct: 301 ILGLQLMRVAWYAGFSAKTRKEQRSYP 327
[Close]
BLAST of Spo24238.1 vs. NCBI nr
Match: gi|731361090|ref|XP_010692169.1| (PREDICTED: uncharacterized protein LOC104905351 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 551.6 bits (1420), Expect = 9.300e-154
Identity = 272/321 (84.74%), Postives = 294/321 (91.59%), Query Frame = 1 

		  

Query: 2   SSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLTY 61
           SSLIRTP P++TV GF Y SQK+ RLTN+  G SLPKL +NRLSVCCSKLTPWEPTPLTY
Sbjct: 3   SSLIRTPFPSITVTGFCYPSQKYGRLTNHRHGLSLPKLKMNRLSVCCSKLTPWEPTPLTY 62

Query: 62  APTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILGP 121
           APTDEAEPE +EET N+FDTLKFE  AAT AA+SEKL Q  S  S+ AGFLKWPLWILGP
Sbjct: 63  APTDEAEPEYVEETANIFDTLKFEDAAATAAADSEKLTQSQSKPSKEAGFLKWPLWILGP 122

Query: 122 GFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPME 181
            FLLVTGMVPTLWLPISSIFLG NIASLL+LVGLDCIFN+GA LFLLMAHSTTQPKDPME
Sbjct: 123 AFLLVTGMVPTLWLPISSIFLGSNIASLLALVGLDCIFNLGATLFLLMAHSTTQPKDPME 182

Query: 182 APQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSVQ 241
           +P+SKAP SYRFWNMFASI+GYAIPLALL+GS KG LQPQLAPISY+VLLGPYLLLLSVQ
Sbjct: 183 SPKSKAPFSYRFWNMFASIVGYAIPLALLFGSQKGFLQPQLAPISYLVLLGPYLLLLSVQ 242

Query: 242 MLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVLI 301
           MLTELLTWHW+SPVWLVTPV+YEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVLI
Sbjct: 243 MLTELLTWHWKSPVWLVTPVIYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVLI 302

Query: 302 LGLQLMRVAWYAGFSAKTRKE 323
           LGLQLMRVAW+AGFSA+ +K+
Sbjct: 303 LGLQLMRVAWFAGFSARNQKK 323
[Close]
BLAST of Spo24238.1 vs. NCBI nr
Match: gi|743788488|ref|XP_011033648.1| (PREDICTED: uncharacterized protein LOC105132062 [Populus euphratica])

HSP 1 Score: 407.9 bits (1047), Expect = 1.700e-110
Identity = 198/324 (61.11%), Postives = 252/324 (77.78%), Query Frame = 1 

		  

Query: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTN--NHVGFSLPKLHLNRLSVCCSKLTPWEPTP 60
           M+SL++ P    T+   +   +K +  +N   H G   P++H+N  +VCC+KLTPWEP+P
Sbjct: 1   MASLVKAPPTMSTINAHQVHLRKLKLPSNLNMHHGLRFPRIHVNHTTVCCTKLTPWEPSP 60

Query: 61  LTYAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWI 120
           +TYAPT +A   +L++T N+F+TLK E TA  PA  SE+LA  T+       FLKWP+W+
Sbjct: 61  VTYAPTIDASGNLLKKTSNIFETLKSEDTAEAPATNSEELADTTNQSLVHFQFLKWPMWL 120

Query: 121 LGPGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKD 180
           LGP  LL TGMVPTLWLP+SS+FLGPNIASLLSL+GLDCIFN+GA LFLLMA S ++ K+
Sbjct: 121 LGPSLLLTTGMVPTLWLPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKN 180

Query: 181 PMEAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLL 240
             +   SK PLSY+FWNM A++ G+ IPL  L GS KG+LQPQL  I + VLLGPY+LLL
Sbjct: 181 QAQTCNSKPPLSYKFWNMVATVSGFVIPLMALLGSRKGILQPQLPFIPFAVLLGPYMLLL 240

Query: 241 SVQMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWW 300
           SVQ+LTELLTWHWQSPVWLVTPVVYE+YR+LQLMRGLKL AE+SAP WM+H IRGLV WW
Sbjct: 241 SVQILTELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWW 300

Query: 301 VLILGLQLMRVAWYAGFSAKTRKE 323
           +LILG+QLM VAW+AGF+A+++++
Sbjct: 301 ILILGVQLMSVAWFAGFAARSQQQ 324
[Close]
BLAST of Spo24238.1 vs. NCBI nr
Match: gi|743788490|ref|XP_011033660.1| (PREDICTED: uncharacterized protein LOC105132070 isoform X1 [Populus euphratica])

HSP 1 Score: 406.8 bits (1044), Expect = 3.700e-110
Identity = 197/324 (60.80%), Postives = 252/324 (77.78%), Query Frame = 1 

		  

Query: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTN--NHVGFSLPKLHLNRLSVCCSKLTPWEPTP 60
           M+SL++ P    T+   +   +K +  +N   H G   P++H+N  +VCC+KLTPWEP+P
Sbjct: 21  MASLVKAPPTMSTINAHQVHLRKLKLPSNLNMHHGLRFPRIHVNHTTVCCTKLTPWEPSP 80

Query: 61  LTYAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWI 120
           +TYAPT +A   +L++T N+F+TLK E TA  PA  SE+LA  T+       FLKWP+W+
Sbjct: 81  VTYAPTIDASGNLLKKTSNIFETLKSEDTAEAPATNSEELADTTNQSLVHFQFLKWPMWL 140

Query: 121 LGPGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKD 180
           LGP  LL TGMVPTLW+P+SS+FLGPNIASLLSL+GLDCIFN+GA LFLLMA S ++ K+
Sbjct: 141 LGPSLLLTTGMVPTLWVPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKN 200

Query: 181 PMEAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLL 240
             +   SK PLSY+FWNM A++ G+ IPL  L GS KG+LQPQL  I + VLLGPY+LLL
Sbjct: 201 QAQTCNSKPPLSYKFWNMVATVSGFVIPLMALLGSRKGILQPQLPFIPFAVLLGPYMLLL 260

Query: 241 SVQMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWW 300
           SVQ+LTELLTWHWQSPVWLVTPVVYE+YR+LQLMRGLKL AE+SAP WM+H IRGLV WW
Sbjct: 261 SVQILTELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWW 320

Query: 301 VLILGLQLMRVAWYAGFSAKTRKE 323
           +LILG+QLM VAW+AGF+A+++++
Sbjct: 321 ILILGVQLMSVAWFAGFAARSQQQ 344
[Close]
BLAST of Spo24238.1 vs. NCBI nr
Match: gi|743788494|ref|XP_011033667.1| (PREDICTED: uncharacterized protein LOC105132070 isoform X2 [Populus euphratica])

HSP 1 Score: 406.8 bits (1044), Expect = 3.700e-110
Identity = 197/324 (60.80%), Postives = 252/324 (77.78%), Query Frame = 1 

		  

Query: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTN--NHVGFSLPKLHLNRLSVCCSKLTPWEPTP 60
           M+SL++ P    T+   +   +K +  +N   H G   P++H+N  +VCC+KLTPWEP+P
Sbjct: 1   MASLVKAPPTMSTINAHQVHLRKLKLPSNLNMHHGLRFPRIHVNHTTVCCTKLTPWEPSP 60

Query: 61  LTYAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWI 120
           +TYAPT +A   +L++T N+F+TLK E TA  PA  SE+LA  T+       FLKWP+W+
Sbjct: 61  VTYAPTIDASGNLLKKTSNIFETLKSEDTAEAPATNSEELADTTNQSLVHFQFLKWPMWL 120

Query: 121 LGPGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKD 180
           LGP  LL TGMVPTLW+P+SS+FLGPNIASLLSL+GLDCIFN+GA LFLLMA S ++ K+
Sbjct: 121 LGPSLLLTTGMVPTLWVPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKN 180

Query: 181 PMEAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLL 240
             +   SK PLSY+FWNM A++ G+ IPL  L GS KG+LQPQL  I + VLLGPY+LLL
Sbjct: 181 QAQTCNSKPPLSYKFWNMVATVSGFVIPLMALLGSRKGILQPQLPFIPFAVLLGPYMLLL 240

Query: 241 SVQMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWW 300
           SVQ+LTELLTWHWQSPVWLVTPVVYE+YR+LQLMRGLKL AE+SAP WM+H IRGLV WW
Sbjct: 241 SVQILTELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWW 300

Query: 301 VLILGLQLMRVAWYAGFSAKTRKE 323
           +LILG+QLM VAW+AGF+A+++++
Sbjct: 301 ILILGVQLMSVAWFAGFAARSQQQ 324
[Close]
BLAST of Spo24238.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSC1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040260 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 1.400e-185
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 

		  

Query: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLT 60
           MSSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLT
Sbjct: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLT 60

Query: 61  YAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILG 120
           YAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILG
Sbjct: 61  YAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILG 120

Query: 121 PGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPM 180
           PGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPM
Sbjct: 121 PGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPM 180

Query: 181 EAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSV 240
           EAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSV
Sbjct: 181 EAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSV 240

Query: 241 QMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVL 300
           QMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVL
Sbjct: 241 QMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVL 300

Query: 301 ILGLQLMRVAWYAGFSAKTRKEQRSYP 328
           ILGLQLMRVAWYAGFSAKTRKEQRSYP
Sbjct: 301 ILGLQLMRVAWYAGFSAKTRKEQRSYP 327
[Close]
BLAST of Spo24238.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EAH6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018600 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 6.500e-154
Identity = 272/321 (84.74%), Postives = 294/321 (91.59%), Query Frame = 1 

		  

Query: 2   SSLIRTPVPNVTVAGFRYQSQKHRRLTNNHVGFSLPKLHLNRLSVCCSKLTPWEPTPLTY 61
           SSLIRTP P++TV GF Y SQK+ RLTN+  G SLPKL +NRLSVCCSKLTPWEPTPLTY
Sbjct: 3   SSLIRTPFPSITVTGFCYPSQKYGRLTNHRHGLSLPKLKMNRLSVCCSKLTPWEPTPLTY 62

Query: 62  APTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWILGP 121
           APTDEAEPE +EET N+FDTLKFE  AAT AA+SEKL Q  S  S+ AGFLKWPLWILGP
Sbjct: 63  APTDEAEPEYVEETANIFDTLKFEDAAATAAADSEKLTQSQSKPSKEAGFLKWPLWILGP 122

Query: 122 GFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKDPME 181
            FLLVTGMVPTLWLPISSIFLG NIASLL+LVGLDCIFN+GA LFLLMAHSTTQPKDPME
Sbjct: 123 AFLLVTGMVPTLWLPISSIFLGSNIASLLALVGLDCIFNLGATLFLLMAHSTTQPKDPME 182

Query: 182 APQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLLSVQ 241
           +P+SKAP SYRFWNMFASI+GYAIPLALL+GS KG LQPQLAPISY+VLLGPYLLLLSVQ
Sbjct: 183 SPKSKAPFSYRFWNMFASIVGYAIPLALLFGSQKGFLQPQLAPISYLVLLGPYLLLLSVQ 242

Query: 242 MLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVLI 301
           MLTELLTWHW+SPVWLVTPV+YEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVLI
Sbjct: 243 MLTELLTWHWKSPVWLVTPVIYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWWVLI 302

Query: 302 LGLQLMRVAWYAGFSAKTRKE 323
           LGLQLMRVAW+AGFSA+ +K+
Sbjct: 303 LGLQLMRVAWFAGFSARNQKK 323
[Close]
BLAST of Spo24238.1 vs. UniProtKB/TrEMBL
Match: U7E0P8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0176s00200g PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 7.500e-110
Identity = 197/324 (60.80%), Postives = 251/324 (77.47%), Query Frame = 1 

		  

Query: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTN--NHVGFSLPKLHLNRLSVCCSKLTPWEPTP 60
           M+SL++ P    T+   +   +K + L+N   H G   P++H+N  +VCC+KLTPWEP+P
Sbjct: 1   MASLVKAPPTLSTINSHQVHLRKLKLLSNLNMHHGLRFPRIHVNHTTVCCTKLTPWEPSP 60

Query: 61  LTYAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWI 120
           +TYAPT +A   +L++T N+F+TLK E TA  PA  SE+L    +       FLKWP+W+
Sbjct: 61  VTYAPTIDASGNLLKKTSNIFETLKSEDTAEAPATNSEELTDTKNQSLVQFQFLKWPMWL 120

Query: 121 LGPGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKD 180
           LGP  LL TGMVPTLWLP+SS+FLGPNIASLLSL+GLDCIFN+GA LFLLMA S ++ K+
Sbjct: 121 LGPSLLLTTGMVPTLWLPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKN 180

Query: 181 PMEAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLL 240
             ++  SK PLSY+FWNM A++ G+ IPL  L GS KG LQPQL  I + VLLGPY+LLL
Sbjct: 181 QAQSCNSKPPLSYKFWNMVATVSGFVIPLMALLGSQKGTLQPQLPFIPFAVLLGPYMLLL 240

Query: 241 SVQMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWW 300
           SVQ+LTELLTWHWQSPVWLVTPVVYE+YR+LQLMRGLKL AE+SAP WM+H IRGLV WW
Sbjct: 241 SVQILTELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWW 300

Query: 301 VLILGLQLMRVAWYAGFSAKTRKE 323
           +LILG+QLM VAW+AGF+A+++++
Sbjct: 301 ILILGVQLMSVAWFAGFAAQSQQQ 324
[Close]
BLAST of Spo24238.1 vs. UniProtKB/TrEMBL
Match: A9PJH0_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.100e-108
Identity = 195/324 (60.19%), Postives = 249/324 (76.85%), Query Frame = 1 

		  

Query: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTN--NHVGFSLPKLHLNRLSVCCSKLTPWEPTP 60
           M+SL++ P    T+   +   +K + L+N   H G   P++H+N  +VCC+KLTPWEP+P
Sbjct: 1   MASLVKAPPTMSTINAHQVHLRKLKLLSNLNMHHGLRFPRIHVNHTTVCCAKLTPWEPSP 60

Query: 61  LTYAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWI 120
           +TYAPT +A   +L++T N+F+TLK E TA  PA  SE+L    +       FLKWP+W+
Sbjct: 61  VTYAPTIDASGNLLKKTSNIFETLKSEDTAEAPATNSEELTDTKNRSLVQFQFLKWPMWL 120

Query: 121 LGPGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKD 180
           LGP  LL TGMVPTLWLP+SS+FLGPNIASLLSL+GLDCIFN+GA LFLLMA S ++ K+
Sbjct: 121 LGPSLLLTTGMVPTLWLPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKN 180

Query: 181 PMEAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLL 240
             +   SK PLSY+FWN+ A++ G+ IPL  L GS KG L PQL  I + VLLGPY+LLL
Sbjct: 181 QAQTCNSKPPLSYKFWNVVATVSGFVIPLMALLGSQKGTLLPQLPFIPFAVLLGPYMLLL 240

Query: 241 SVQMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWW 300
           SVQ+LTELLTWHWQSPVWLVTPVVYE+YR+LQLMRGLKL AE+SAP WM+H IRGLV WW
Sbjct: 241 SVQILTELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWW 300

Query: 301 VLILGLQLMRVAWYAGFSAKTRKE 323
           +LILG+QLM VAW+AGF+A+++++
Sbjct: 301 ILILGVQLMSVAWFAGFAARSQQQ 324
[Close]
BLAST of Spo24238.1 vs. UniProtKB/TrEMBL
Match: U5FT19_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05990g PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.400e-108
Identity = 195/324 (60.19%), Postives = 249/324 (76.85%), Query Frame = 1 

		  

Query: 1   MSSLIRTPVPNVTVAGFRYQSQKHRRLTN--NHVGFSLPKLHLNRLSVCCSKLTPWEPTP 60
           M+SL++ P    T+   +   +K + L+N   H G   P++H+N  +VCC+KLTPWEP+P
Sbjct: 21  MASLVKAPPTLSTINSHQVHLRKLKLLSNLNMHHGLRFPRIHVNHTTVCCTKLTPWEPSP 80

Query: 61  LTYAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKLAQKTSNKSQGAGFLKWPLWI 120
           +TYAPT +A   +L++T N+F+TLK E TA  PA  SE+L    +       FLKWP+W+
Sbjct: 81  VTYAPTIDASGNLLKKTSNIFETLKSEDTAEAPATNSEELTDTKNQSLVQFQFLKWPMWL 140

Query: 121 LGPGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNIGAMLFLLMAHSTTQPKD 180
           LGP  LL TGMVPTLWLP+SS+FLGPNIASLLSL+GLDCIFN+GA LFLLMA S ++ K+
Sbjct: 141 LGPSLLLTTGMVPTLWLPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKN 200

Query: 181 PMEAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLLQPQLAPISYMVLLGPYLLLL 240
             +   SK PLSY+FWN+ A++ G+ IPL  L GS KG L PQL  I + VLLGPY+LLL
Sbjct: 201 QAQTCNSKPPLSYKFWNVVATVSGFVIPLMALLGSQKGTLLPQLPFIPFAVLLGPYMLLL 260

Query: 241 SVQMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLSAEISAPAWMMHTIRGLVCWW 300
           SVQ+LTELLTWHWQSPVWLVTPVVYE+YR+LQLMRGLKL AE+SAP WM+H IRGLV WW
Sbjct: 261 SVQILTELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWW 320

Query: 301 VLILGLQLMRVAWYAGFSAKTRKE 323
           +LILG+QLM VAW+AGF+A+++++
Sbjct: 321 ILILGVQLMSVAWFAGFAARSQQQ 344
[Close]
BLAST of Spo24238.1 vs. TAIR (Arabidopsis)
Match: AT3G60590.3 (unknown protein)

HSP 1 Score: 335.5 bits (859), Expect = 3.700e-92
Identity = 166/286 (58.04%), Postives = 219/286 (76.57%), Query Frame = 1 

		  

Query: 46  VCCSKLTPWEPTPLTYAPTDEAEPEILEETPNLFDTLKFEGTAATPAAESEKL----AQK 105
           +C  KL+ WEP+P  +A  +EA   +L++T N+F+++  E      +AE EK+     Q+
Sbjct: 121 LCTPKLSQWEPSPFIHASAEEAADIVLDKTANVFESIVSE------SAEEEKVDMSAQQR 180

Query: 106 TSNKSQGAGFLKWPLWILGPGFLLVTGMVPTLWLPISSIFLGPNIASLLSLVGLDCIFNI 165
           T+++ Q    LKWP+W+LGP  LL +GM PTLWLP+SS+FLG N+ SLLSL+GLDCIFN+
Sbjct: 181 TNSQVQ---VLKWPIWLLGPSVLLTSGMAPTLWLPLSSVFLGSNVVSLLSLIGLDCIFNL 240

Query: 166 GAMLFLLMAHSTTQPKDPMEAPQSKAPLSYRFWNMFASIIGYAIPLALLYGSHKGLL--- 225
           GA LFLLMA S  +PKDP ++  SK P SY+FWNMF+ IIG+ +P+ LL+GS  GLL   
Sbjct: 241 GATLFLLMADSCARPKDPSQSCNSKPPFSYKFWNMFSLIIGFLVPMLLLFGSQSGLLASL 300

Query: 226 QPQLAPISYMVLLGPYLLLLSVQMLTELLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLS 285
           QPQ+  +S  V+L PY +LL+VQ LTE+LTWHWQSPVWLVTPVVYEAYR+LQLMRGL LS
Sbjct: 301 QPQIPFLSSAVILFPYFILLAVQTLTEILTWHWQSPVWLVTPVVYEAYRILQLMRGLTLS 360

Query: 286 AEISAPAWMMHTIRGLVCWWVLILGLQLMRVAWYAGFSAKTRKEQR 325
           AE++AP W++H +RGLV WWVLILG+QLMRVAW+AGF+++T   Q+
Sbjct: 361 AEVNAPVWVVHMLRGLVSWWVLILGMQLMRVAWFAGFASRTTTGQQ 397
The following BLAST results are available for this feature:
BLAST of Spo24238.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902230067|gb|KNA21697.1|2.0e-185100.hypothetical protein SOVF_0402... [more]
gi|731361090|ref|XP_010692169.1|9.3e-15484.7PREDICTED: uncharacterized pro... [more]
gi|743788488|ref|XP_011033648.1|1.7e-11061.1PREDICTED: uncharacterized pro... [more]
gi|743788490|ref|XP_011033660.1|3.7e-11060.8PREDICTED: uncharacterized pro... [more]
gi|743788494|ref|XP_011033667.1|3.7e-11060.8PREDICTED: uncharacterized pro... [more]
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BLAST of Spo24238.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RSC1_SPIOL1.4e-185100.Uncharacterized protein OS=Spi... [more]
A0A0J8EAH6_BETVU6.5e-15484.7Uncharacterized protein OS=Bet... [more]
U7E0P8_POPTR7.5e-11060.8Uncharacterized protein OS=Pop... [more]
A9PJH0_9ROSI1.1e-10860.1Putative uncharacterized prote... [more]
U5FT19_POPTR1.4e-10860.1Uncharacterized protein OS=Pop... [more]
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BLAST of Spo24238.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24238.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G60590.33.7e-9258.0unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33918FAMILY NOT NAMEDcoord: 1..326
score: 1.4E
NoneNo IPR availablePANTHERPTHR33918:SF3SUBFAMILY NOT NAMEDcoord: 1..326
score: 1.4E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009407 toxin catabolic process
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010150 leaf senescence
biological_process GO:0009556 microsporogenesis
biological_process GO:0008360 regulation of cell shape
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0009651 response to salt stress
biological_process GO:0042742 defense response to bacterium
biological_process GO:0042545 cell wall modification
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0048312 intracellular distribution of mitochondria
biological_process GO:0015976 carbon utilization
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006020 inositol metabolic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0050832 defense response to fungus
biological_process GO:0009870 defense response signaling pathway, resistance gene-dependent
biological_process GO:0048598 embryonic morphogenesis
biological_process GO:0006270 DNA replication initiation
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006073 cellular glucan metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0008283 cell proliferation
biological_process GO:0006342 chromatin silencing
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006306 DNA methylation
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0052544 defense response by callose deposition in cell wall
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0007000 nucleolus organization
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0009909 regulation of flower development
biological_process GO:0006007 glucose catabolic process
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0048481 plant ovule development
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0000381 regulation of alternative mRNA splicing, via spliceosome
biological_process GO:0033356 UDP-L-arabinose metabolic process
biological_process GO:0044070 regulation of anion transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009846 pollen germination
biological_process GO:0009845 seed germination
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0045901 positive regulation of translational elongation
biological_process GO:0045905 positive regulation of translational termination
biological_process GO:0006452 translational frameshifting
biological_process GO:0055075 potassium ion homeostasis
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006885 regulation of pH
biological_process GO:0035725 sodium ion transmembrane transport
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0006378 mRNA polyadenylation
biological_process GO:0045037 protein import into chloroplast stroma
biological_process GO:0016246 RNA interference
biological_process GO:0006464 cellular protein modification process
biological_process GO:0048825 cotyledon development
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0048571 long-day photoperiodism
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0009744 response to sucrose
biological_process GO:0009611 response to wounding
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0006108 malate metabolic process
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0000280 nuclear division
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043269 regulation of ion transport
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006606 protein import into nucleus
biological_process GO:0006862 nucleotide transport
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0061025 membrane fusion
biological_process GO:0010351 lithium ion transport
biological_process GO:0006869 lipid transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0015696 ammonium transport
biological_process GO:0043090 amino acid import
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006396 RNA processing
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006412 translation
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009116 nucleoside metabolic process
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0015802 basic amino acid transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006554 lysine catabolic process
biological_process GO:0032502 developmental process
biological_process GO:0044248 cellular catabolic process
biological_process GO:0006457 protein folding
biological_process GO:0009987 cellular process
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0030001 metal ion transport
biological_process GO:0016070 RNA metabolic process
cellular_component GO:0005773 vacuole
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0045254 pyruvate dehydrogenase complex
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0000932 P-body
cellular_component GO:0031359 integral component of chloroplast outer membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0005634 nucleus
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005618 cell wall
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005840 ribosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0010006 Toc complex
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005657 replication fork
cellular_component GO:0042555 MCM complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0005730 nucleolus
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0045252 oxoglutarate dehydrogenase complex
cellular_component GO:0016020 membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0008308 voltage-gated anion channel activity
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008536 Ran GTPase binding
molecular_function GO:0004619 phosphoglycerate mutase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0030976 thiamine pyrophosphate binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0015385 sodium:proton antiporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0052691 UDP-arabinopyranose mutase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function GO:0008641 ubiquitin-like modifier activating enzyme activity
molecular_function GO:0004332 fructose-bisphosphate aldolase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0003678 DNA helicase activity
molecular_function GO:0008466 glycogenin glucosyltransferase activity
molecular_function GO:0030060 L-malate dehydrogenase activity
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004816 asparagine-tRNA ligase activity
molecular_function GO:0004749 ribose phosphate diphosphokinase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo051140.80Barchart | Table
Spo240010.79Barchart | Table
Spo138180.77Barchart | Table
Spo248390.77Barchart | Table
Spo070170.76Barchart | Table
Spo135610.75Barchart | Table
Spo052320.75Barchart | Table
Spo070160.75Barchart | Table
Spo063170.74Barchart | Table
Spo142670.74Barchart | Table
Spo069040.74Barchart | Table
Spo236220.74Barchart | Table
Spo168940.73Barchart | Table
Spo047590.73Barchart | Table
Spo059090.73Barchart | Table
Spo060970.73Barchart | Table
Spo201540.73Barchart | Table
Spo068400.73Barchart | Table
Spo253060.73Barchart | Table
Spo198730.73Barchart | Table
Spo194400.73Barchart | Table
Spo194130.73Barchart | Table
Spo078210.72Barchart | Table
Spo089310.72Barchart | Table
Spo185050.72Barchart | Table
Spo098550.72Barchart | Table
Spo105650.72Barchart | Table
Spo182210.71Barchart | Table
Spo225050.71Barchart | Table
Spo001250.71Barchart | Table
Spo015350.71Barchart | Table
Spo210770.71Barchart | Table
Spo105530.71Barchart | Table
Spo048930.71Barchart | Table
Spo132880.70Barchart | Table
Spo204600.70Barchart | Table
Spo136210.70Barchart | Table
Spo029930.70Barchart | Table
Spo239660.70Barchart | Table
Spo229360.70Barchart | Table
Spo109800.70Barchart | Table
Spo129180.69Barchart | Table
Spo014030.69Barchart | Table
Spo068630.69Barchart | Table
Spo097110.69Barchart | Table
Spo225350.69Barchart | Table
Spo229390.69Barchart | Table
Spo249160.69Barchart | Table
Spo271540.68Barchart | Table
Spo029280.68Barchart | Table
Spo023970.68Barchart | Table
Spo067450.68Barchart | Table
Spo043900.68Barchart | Table
Spo096330.68Barchart | Table
Spo014780.68Barchart | Table
Spo050900.68Barchart | Table
Spo210820.67Barchart | Table
Spo256610.67Barchart | Table
Spo252060.67Barchart | Table
Spo092080.67Barchart | Table
Spo134870.66Barchart | Table
Spo191120.66Barchart | Table
Spo192540.66Barchart | Table
Spo095730.66Barchart | Table
Spo076680.66Barchart | Table
Spo199050.66Barchart | Table
Spo052440.66Barchart | Table
Spo219850.66Barchart | Table
Spo037140.66Barchart | Table
Spo230700.66Barchart | Table
Spo035730.66Barchart | Table
Spo159940.66Barchart | Table
Spo234960.65Barchart | Table
Spo127350.65Barchart | Table
Spo163780.65Barchart | Table
Spo029880.65Barchart | Table