Spo24185 (gene) | SpinachBase

Overview


Name	Spo24185
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Tracheary element differentiation-like protein 7
Location	SpoScf_00807 : 95188 .. 96036 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAACCTCAAAATTTCGACTATCCCTTTTTCCCTTTTCCGCCACCGCATGCTTTCCCGTTCCCACCACCCTCTCATCCCATTCCTCCACCAAACCTACCACCTCCTTTTCATCCCAGTTCTTCACCAAAACCAACCCCTCCTTCATCTCCACCATCACCGACAAAGCCCTCAAACCCTCCTCCAACTCCAATACCGAAACCACCGCCACATTATCTCCCTCCACCAAAGCCCTCAAGCCCTCCTCCATCACCGATACCTAAACCACCTCCGCATTCTCTTCCTCCACCGAAGCCCACTAACCCCCCTCCATCACCGAAACCAAAACCACCTCCACATGCTCTCCCTCCACCAAAGCCATCAAACCCTCCTCCTAGGCCGCCTCCACATCATTTGCCTCCACCAGCTCCAGCAGTAAAGCCACCACCATTTCCACCGAAACTTCCACCACCACCTCCTCATGTGGTACCCACTCCACCTCCTGCTCCTGGGCACCATGCTACCATCATTATTGTTTTTGTATCTCTTGGAGGGCTTTTCTTTCTTGCATTCCTCTCAGCAGCATTGGTTTGCTTTATCAAGAAGAGAAGAAAGAGAGTGATGAAGGAAACTGATGATATTACCGTCGATGAACAGATGCATGTTCACGAAGATATCGTACGTGGTCCTCATGGTGAACAAGCTGTGCTAGTAACCTTGGAAGAGGATATTCATTCTCATGAAACTCTAACAAAGGATGAAATTGTGGGCGGAAGAACCTCTCATGCACATCATCCTCATTCTTTCCAAGCAGCTGCACCTGCTTTTGACTCGGATCATCCCCAGATTGCGAATAAGAGCTCGTGA

mRNA sequence

ATGGCTCAACCTCAAAATTTCGACTATCCCTTTTTCCCTTTTCCGCCACCGCATGCTTTCCCGTTCCCACCACCCTCTCATCCCATTCCTCCACCAAACCTACCACCTCCTTTTCATCCCAGTTCTTCACCAAAACCAACCCCTCCTTCATCTCCACCATCACCGACAAAGCCCTCAAACCCTCCTCCAACTCCAATACCGAAACCACCGCCACATTATCTCCCTCCACCAAAGCCCTCAAGCCCTCCTCCATCACCGATACCTAAACCACCTCCGCATTCTCTTCCTCCACCGAAGCCCACTAACCCCCCTCCATCACCGAAACCAAAACCACCTCCACATGCTCTCCCTCCACCAAAGCCATCAAACCCTCCTCCTAGGCCGCCTCCACATCATTTGCCTCCACCAGCTCCAGCAGTAAAGCCACCACCATTTCCACCGAAACTTCCACCACCACCTCCTCATGTGGTACCCACTCCACCTCCTGCTCCTGGGCACCATGCTACCATCATTATTGTTTTTGTATCTCTTGGAGGGCTTTTCTTTCTTGCATTCCTCTCAGCAGCATTGGTTTGCTTTATCAAGAAGAGAAGAAAGAGAGTGATGAAGGAAACTGATGATATTACCGTCGATGAACAGATGCATGTTCACGAAGATATCGTACGTGGTCCTCATGGTGAACAAGCTGTGCTAGTAACCTTGGAAGAGGATATTCATTCTCATGAAACTCTAACAAAGGATGAAATTGTGGGCGGAAGAACCTCTCATGCACATCATCCTCATTCTTTCCAAGCAGCTGCACCTGCTTTTGACTCGGATCATCCCCAGATTGCGAATAAGAGCTCGTGA

Coding sequence (CDS)

ATGGCTCAACCTCAAAATTTCGACTATCCCTTTTTCCCTTTTCCGCCACCGCATGCTTTCCCGTTCCCACCACCCTCTCATCCCATTCCTCCACCAAACCTACCACCTCCTTTTCATCCCAGTTCTTCACCAAAACCAACCCCTCCTTCATCTCCACCATCACCGACAAAGCCCTCAAACCCTCCTCCAACTCCAATACCGAAACCACCGCCACATTATCTCCCTCCACCAAAGCCCTCAAGCCCTCCTCCATCACCGATACCTAAACCACCTCCGCATTCTCTTCCTCCACCGAAGCCCACTAACCCCCCTCCATCACCGAAACCAAAACCACCTCCACATGCTCTCCCTCCACCAAAGCCATCAAACCCTCCTCCTAGGCCGCCTCCACATCATTTGCCTCCACCAGCTCCAGCAGTAAAGCCACCACCATTTCCACCGAAACTTCCACCACCACCTCCTCATGTGGTACCCACTCCACCTCCTGCTCCTGGGCACCATGCTACCATCATTATTGTTTTTGTATCTCTTGGAGGGCTTTTCTTTCTTGCATTCCTCTCAGCAGCATTGGTTTGCTTTATCAAGAAGAGAAGAAAGAGAGTGATGAAGGAAACTGATGATATTACCGTCGATGAACAGATGCATGTTCACGAAGATATCGTACGTGGTCCTCATGGTGAACAAGCTGTGCTAGTAACCTTGGAAGAGGATATTCATTCTCATGAAACTCTAACAAAGGATGAAATTGTGGGCGGAAGAACCTCTCATGCACATCATCCTCATTCTTTCCAAGCAGCTGCACCTGCTTTTGACTCGGATCATCCCCAGATTGCGAATAAGAGCTCGTGA

Protein sequence

MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSNPPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSPKPKPPPHALPPPKPSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHATIIIVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHSHETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHPQIANKSS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24185.1	Spo24185.1	mRNA

Homology

[Close]

BLAST of Spo24185.1 vs. NCBI nr
Match: gi|902172178|gb|KNA08087.1| (hypothetical protein SOVF_165870 [Spinacia oleracea])

HSP 1 Score: 495.7 bits (1275), Expect = 5.200e-137
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1


		  
Query: 1   MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSN 60
           MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSN
Sbjct: 1   MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSN 60

Query: 61  PPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSPKPKPPPHALPPPK 120
           PPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSPKPKPPPHALPPPK
Sbjct: 61  PPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSPKPKPPPHALPPPK 120

Query: 121 PSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHATIIIVFVSLGGL 180
           PSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHATIIIVFVSLGGL
Sbjct: 121 PSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHATIIIVFVSLGGL 180

Query: 181 FFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHS 240
           FFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHS
Sbjct: 181 FFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHS 240

Query: 241 HETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHPQIANKSS 283
           HETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHPQIANKSS
Sbjct: 241 HETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHPQIANKSS 282

[Close]

BLAST of Spo24185.1 vs. NCBI nr
Match: gi|731338275|ref|XP_010680241.1| (PREDICTED: proline-rich receptor-like protein kinase PERK2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 313.9 bits (803), Expect = 2.800e-82
Identity = 215/297 (72.39%), Postives = 232/297 (78.11%), Query Frame = 1


		  
Query: 1   MAQPQNFDYPFFPFPPPHAFPFPP----PSHPIPPPNLPPPFHPSSSPKPTPPS------ 60
           MAQPQ F+YPFFPFPPPH++PFPP    P HPI PP LPPPFHP S PKPTPPS      
Sbjct: 1   MAQPQYFNYPFFPFPPPHSYPFPPKLPPPFHPISPPYLPPPFHPISPPKPTPPSPTKPLN 60

Query: 61  ---SP-----PSPTKPSNPPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTN 120
              SP     PSPTKPSNPPPTP PKPPP    P KP +PPP+P PKPPP    P KP+N
Sbjct: 61  PPPSPKPKPSPSPTKPSNPPPTPKPKPPPS---PAKPFNPPPAPKPKPPPS---PTKPSN 120

Query: 121 PPPSPKPKPPPHALPPPKPSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPP- 180
           PPP+PKPKPPPH+LPPPKPSNPPPRPPPH  PPP PAVKPPP PPKLPPPPPH+ PTPP 
Sbjct: 121 PPPAPKPKPPPHSLPPPKPSNPPPRPPPHPFPPPPPAVKPPPLPPKLPPPPPHITPTPPL 180

Query: 181 ---PAPGHHATIIIVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHE 240
              PAPGHHATIIIVFVSLGGLFFLAFLSAAL CF+KKRRKR++KETDDIT DE++HVHE
Sbjct: 181 LPPPAPGHHATIIIVFVSLGGLFFLAFLSAALFCFMKKRRKRMIKETDDITFDERVHVHE 240

Query: 241 DIVRGPHGEQAVLVTLEEDIHSHETLTKDEIVGGRTSHA---HHPHSFQAAAPAFDS 273
            +V GPHGE AVLVT EEDIHSHET TK+EIV G TSH    HH HS + AAP   S
Sbjct: 241 SVVPGPHGEPAVLVTFEEDIHSHETKTKNEIVDG-TSHTKAIHHHHSPEIAAPTLSS 290

[Close]

BLAST of Spo24185.1 vs. NCBI nr
Match: gi|720087061|ref|XP_010244035.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Nelumbo nucifera])

HSP 1 Score: 140.6 bits (353), Expect = 4.300e-30
Identity = 153/293 (52.22%), Postives = 183/293 (62.46%), Query Frame = 1


		  
Query: 4   PQNFDYPFFPFPPPHAFPFPPP----SHPIPPPNLPPP----FHPSSSPKPTPPSSPPSP 63
           P NF +PFF FPPP +FP PPP    S P  P   PPP    F+P  SP   PP  PPSP
Sbjct: 5   PNNFGFPFF-FPPPFSFPSPPPHLAPSPPSSPSATPPPPRRPFNPPPSPAAKPP--PPSP 64

Query: 64  TKPSNPPPTPI----------PKPPPHYLPPPKPSSPPPSPI-PKPPPHS----LPPPKP 123
            KP  PPP+P+          P PPP   P  KP  PPPSP+ P PPP S    LPPP P
Sbjct: 65  VKPLPPPPSPVKPLPPPSPVKPLPPPS--PAAKP--PPPSPVKPLPPPPSPVKPLPPPSP 124

Query: 124 TNP-PPSPKPKPPPHALPPPKPSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPT 183
             P PP P P  P   LPPP P  P   PPPH +PPP+P   PPP P  L PPPPHVVP 
Sbjct: 125 VKPLPPPPSPVKP---LPPPSPVKP--LPPPHSVPPPSPIRPPPPHP--LAPPPPHVVPP 184

Query: 184 PPPAPGHHAT-IIIVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHE 243
           PPP+ GHH+T II+VFVSLGGLFFLAFLSAAL CF+KK++K+V +ET+ I VDE + + E
Sbjct: 185 PPPS-GHHSTVIIVVFVSLGGLFFLAFLSAALCCFLKKKKKKV-QETEIINVDEHLKIQE 244

Query: 244 DIVRGPHGEQAVLVTLEEDIHSHETLTKDEIVGGRTSHAHHPHSFQAAAPAFD 272
            IV GPHG Q VL+++E+D+H  E + K+E VG     A H  + ++  PA +
Sbjct: 245 AIVPGPHGTQTVLLSIEDDVHIQEEIKKNETVG----EASHVKTMKSPPPALE 277

[Close]

BLAST of Spo24185.1 vs. NCBI nr
Match: gi|590708641|ref|XP_007048335.1| (Tracheary element differentiation-related 7 [Theobroma cacao])

HSP 1 Score: 138.7 bits (348), Expect = 1.600e-29
Identity = 138/284 (48.59%), Postives = 171/284 (60.21%), Query Frame = 1


		  
Query: 1   MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSN 60
           MA   N  +P+FP PPPH     PPS    PP +PPP +  S P+PTPP  PP+P K S 
Sbjct: 1   MASITNMYFPYFPLPPPHG----PPS----PPKMPPPHNHPSPPRPTPPYKPPTPPKVSP 60

Query: 61  PPPTPIPK--PPPHYLPPPKPSSPPPSP----IPKPPPHSLPPPKPTNP--PPSPKPKPP 120
           P  TP P    PPHY+P P    PPP P    +P P    +PPP P NP  PP P P P 
Sbjct: 61  PHFTPAPPKVAPPHYIPTPPKVQPPPIPPSPTVPSPSKPKVPPPAPHNPITPPQPHPVPA 120

Query: 121 PHALPPPKPSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHAT-II 180
           P    P  PS P  +PPPH LPPP+P V PPP    +PPP       PPPAPGHH+T II
Sbjct: 121 PPPHHPFYPSPPAAKPPPHSLPPPSPIVTPPPH--MIPPP-------PPPAPGHHSTVII 180

Query: 181 IVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVL 240
           +VFVSLGGLFFLAFLS AL CFIKKR+K+++++T+ I++DE + V E I+ GPHGEQ  +
Sbjct: 181 VVFVSLGGLFFLAFLSVALCCFIKKRKKKMVEKTEIISIDEHVKVQEAIMPGPHGEQNAV 240

Query: 241 VTLEEDIHSHETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHP 276
           + +EED+H  E + K + +   +         QAA  A DS  P
Sbjct: 241 LLIEEDVHIEEEIKKSKRISEGSHLKSSQEISQAADMAADSPGP 267

[Close]

BLAST of Spo24185.1 vs. NCBI nr
Match: gi|731430113|ref|XP_010664882.1| (PREDICTED: uncharacterized protein LOC100259240 [Vitis vinifera])

HSP 1 Score: 137.1 bits (344), Expect = 4.700e-29
Identity = 119/213 (55.87%), Postives = 139/213 (65.26%), Query Frame = 1


		  
Query: 48  PPSSPPSPTKPSNPPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSP 107
           PP SPP P     PPP     PPPH  PPP P + PP     PPPH+ PPP    PPP  
Sbjct: 12  PPFSPPPPPPHRRPPP-----PPPHINPPPPPHTRPP-----PPPHTRPPP----PPPHI 71

Query: 108 KPKPPPHALPPPKPSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPP-PAPGH 167
            P PPPH  PPP P   PP PPPH  PPP P  +PPP P   PPPPPHV+P PP P+P  
Sbjct: 72  NPPPPPHTRPPPPPHRRPPPPPPHINPPPPPHTRPPPPPHTRPPPPPHVLPPPPSPSPDS 131

Query: 168 HAT-IIIVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPH 227
           H T IIIVFVSLGGLFFLAFLS AL CF+KKR+K++++ETD I VDE + V E IV GPH
Sbjct: 132 HPTVIIIVFVSLGGLFFLAFLSVALCCFLKKRKKKMVQETDIIKVDEHLTVKEAIVPGPH 191

Query: 228 GEQAVLVTLEEDIHSHETLTKDEIVGGRTSHAH 259
           GEQAV++ +++D+H  E + K+E  G    H H
Sbjct: 192 GEQAVVLFVDDDVHIQEEIRKNEKFG--QGHLH 208

[Close]

BLAST of Spo24185.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLH0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165870 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 3.600e-137
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1


		  
Query: 1   MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSN 60
           MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSN
Sbjct: 1   MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSN 60

Query: 61  PPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSPKPKPPPHALPPPK 120
           PPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSPKPKPPPHALPPPK
Sbjct: 61  PPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSPKPKPPPHALPPPK 120

Query: 121 PSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHATIIIVFVSLGGL 180
           PSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHATIIIVFVSLGGL
Sbjct: 121 PSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHATIIIVFVSLGGL 180

Query: 181 FFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHS 240
           FFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHS
Sbjct: 181 FFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHS 240

Query: 241 HETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHPQIANKSS 283
           HETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHPQIANKSS
Sbjct: 241 HETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHPQIANKSS 282

[Close]

BLAST of Spo24185.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAC6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g132920 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.000e-82
Identity = 215/297 (72.39%), Postives = 232/297 (78.11%), Query Frame = 1


		  
Query: 1   MAQPQNFDYPFFPFPPPHAFPFPP----PSHPIPPPNLPPPFHPSSSPKPTPPS------ 60
           MAQPQ F+YPFFPFPPPH++PFPP    P HPI PP LPPPFHP S PKPTPPS      
Sbjct: 1   MAQPQYFNYPFFPFPPPHSYPFPPKLPPPFHPISPPYLPPPFHPISPPKPTPPSPTKPLN 60

Query: 61  ---SP-----PSPTKPSNPPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTN 120
              SP     PSPTKPSNPPPTP PKPPP    P KP +PPP+P PKPPP    P KP+N
Sbjct: 61  PPPSPKPKPSPSPTKPSNPPPTPKPKPPPS---PAKPFNPPPAPKPKPPPS---PTKPSN 120

Query: 121 PPPSPKPKPPPHALPPPKPSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPP- 180
           PPP+PKPKPPPH+LPPPKPSNPPPRPPPH  PPP PAVKPPP PPKLPPPPPH+ PTPP 
Sbjct: 121 PPPAPKPKPPPHSLPPPKPSNPPPRPPPHPFPPPPPAVKPPPLPPKLPPPPPHITPTPPL 180

Query: 181 ---PAPGHHATIIIVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHE 240
              PAPGHHATIIIVFVSLGGLFFLAFLSAAL CF+KKRRKR++KETDDIT DE++HVHE
Sbjct: 181 LPPPAPGHHATIIIVFVSLGGLFFLAFLSAALFCFMKKRRKRMIKETDDITFDERVHVHE 240

Query: 241 DIVRGPHGEQAVLVTLEEDIHSHETLTKDEIVGGRTSHA---HHPHSFQAAAPAFDS 273
            +V GPHGE AVLVT EEDIHSHET TK+EIV G TSH    HH HS + AAP   S
Sbjct: 241 SVVPGPHGEPAVLVTFEEDIHSHETKTKNEIVDG-TSHTKAIHHHHSPEIAAPTLSS 290

[Close]

BLAST of Spo24185.1 vs. UniProtKB/TrEMBL
Match: A0A061DJG3_THECC (Tracheary element differentiation-related 7 OS=Theobroma cacao GN=TCM_001438 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.100e-29
Identity = 138/284 (48.59%), Postives = 171/284 (60.21%), Query Frame = 1


		  
Query: 1   MAQPQNFDYPFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSN 60
           MA   N  +P+FP PPPH     PPS    PP +PPP +  S P+PTPP  PP+P K S 
Sbjct: 1   MASITNMYFPYFPLPPPHG----PPS----PPKMPPPHNHPSPPRPTPPYKPPTPPKVSP 60

Query: 61  PPPTPIPK--PPPHYLPPPKPSSPPPSP----IPKPPPHSLPPPKPTNP--PPSPKPKPP 120
           P  TP P    PPHY+P P    PPP P    +P P    +PPP P NP  PP P P P 
Sbjct: 61  PHFTPAPPKVAPPHYIPTPPKVQPPPIPPSPTVPSPSKPKVPPPAPHNPITPPQPHPVPA 120

Query: 121 PHALPPPKPSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHAT-II 180
           P    P  PS P  +PPPH LPPP+P V PPP    +PPP       PPPAPGHH+T II
Sbjct: 121 PPPHHPFYPSPPAAKPPPHSLPPPSPIVTPPPH--MIPPP-------PPPAPGHHSTVII 180

Query: 181 IVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVL 240
           +VFVSLGGLFFLAFLS AL CFIKKR+K+++++T+ I++DE + V E I+ GPHGEQ  +
Sbjct: 181 VVFVSLGGLFFLAFLSVALCCFIKKRKKKMVEKTEIISIDEHVKVQEAIMPGPHGEQNAV 240

Query: 241 VTLEEDIHSHETLTKDEIVGGRTSHAHHPHSFQAAAPAFDSDHP 276
           + +EED+H  E + K + +   +         QAA  A DS  P
Sbjct: 241 LLIEEDVHIEEEIKKSKRISEGSHLKSSQEISQAADMAADSPGP 267

[Close]

BLAST of Spo24185.1 vs. UniProtKB/TrEMBL
Match: F6H0A0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15470 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.300e-29
Identity = 119/213 (55.87%), Postives = 139/213 (65.26%), Query Frame = 1


		  
Query: 48  PPSSPPSPTKPSNPPPTPIPKPPPHYLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSP 107
           PP SPP P     PPP     PPPH  PPP P + PP     PPPH+ PPP    PPP  
Sbjct: 12  PPFSPPPPPPHRRPPP-----PPPHINPPPPPHTRPP-----PPPHTRPPP----PPPHI 71

Query: 108 KPKPPPHALPPPKPSNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPP-PAPGH 167
            P PPPH  PPP P   PP PPPH  PPP P  +PPP P   PPPPPHV+P PP P+P  
Sbjct: 72  NPPPPPHTRPPPPPHRRPPPPPPHINPPPPPHTRPPPPPHTRPPPPPHVLPPPPSPSPDS 131

Query: 168 HAT-IIIVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPH 227
           H T IIIVFVSLGGLFFLAFLS AL CF+KKR+K++++ETD I VDE + V E IV GPH
Sbjct: 132 HPTVIIIVFVSLGGLFFLAFLSVALCCFLKKRKKKMVQETDIIKVDEHLTVKEAIVPGPH 191

Query: 228 GEQAVLVTLEEDIHSHETLTKDEIVGGRTSHAH 259
           GEQAV++ +++D+H  E + K+E  G    H H
Sbjct: 192 GEQAVVLFVDDDVHIQEEIRKNEKFG--QGHLH 208

[Close]

BLAST of Spo24185.1 vs. UniProtKB/TrEMBL
Match: C1PGW1_ZINVI (Tracheary element differentiation-related 7A OS=Zinnia violacea GN=TED7A PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.200e-28
Identity = 120/249 (48.19%), Postives = 159/249 (63.86%), Query Frame = 1


		  
Query: 10  PFFPFPPPHAFPFPPPSHPIPPPNLPPPFHPSSSPKPTPPSSPPSPTKPSNPPPTPIPKP 69
           P F  PPPH+ P  PPS   PP ++PPP HP   P P  P SPP  T P   PP P+  P
Sbjct: 34  PHFISPPPHSVP--PPS---PPHSVPPPLHPVPPPSPPHPVSPPPHTVPPPSPPHPV-SP 93

Query: 70  PPHYLPPPKPSSP---PPSPIPKPPPHSLPPPKPTNPPPSPK-----PKPPPHALPPPKP 129
           PPH +PPP P  P   PP  +P P PH +PPP    PPPSP      P PPPH++PPP  
Sbjct: 94  PPHTVPPPSPPHPVFPPPHTVPPPSPHFVPPPPNMVPPPSPPHANPPPPPPPHSVPPPPH 153

Query: 130 SNPPPRPPPHHLPPPAPAVKPPPFPPKLPPPPPHVVPTPPPAPGHHAT-IIIVFVSLGGL 189
           + PPP PPPH +PPPA A         L PPPPH++P PPP+P +H+T I+++FVS GG+
Sbjct: 154 TVPPPPPPPHIIPPPAHA---------LSPPPPHIIPPPPPSPSNHSTTIVVIFVSCGGV 213

Query: 190 FFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHS 249
           FFLAF  AAL CF+KK++K+++++ ++I  DE   V E I +GPHG +  ++++E+DIH 
Sbjct: 214 FFLAFAMAALWCFLKKKKKKMVQKAENIHFDEHRKVTERIEQGPHGTETAILSVEDDIHI 267

[Close]

BLAST of Spo24185.1 vs. TAIR (Arabidopsis)
Match: AT5G48920.1 (tracheary element differentiation-related 7)

HSP 1 Score: 105.9 bits (263), Expect = 4.100e-23
Identity = 102/187 (54.55%), Postives = 118/187 (63.10%), Query Frame = 1


		  
Query: 73  YLPPPKPSSPPPSPIPKPPPHSLPPPKPTNPPPSPKPKPPPHALPPPKPSNPPPRPPPHH 132
           Y  PP    P PSP+P PP H  PPP P +PP  P   PPPH  PP +P   PP P PH 
Sbjct: 10  YYSPPSHQHPLPSPVPPPPSHISPPPPPFSPPHHP---PPPHFSPPHQP---PPSPYPHP 69

Query: 133 LPPPAPAVKPPPFP-PKLPPPPPHVVPTPP--PAPGHHATIIIVFVSLGGLFFLAFLSAA 192
            PPP     P P+P P  PPPPPHV+P PP  PAPGHH  II+V +SLG LFFLAFL+AA
Sbjct: 70  HPPP-----PSPYPHPHQPPPPPHVLPPPPPTPAPGHH-VIIVVVISLGSLFFLAFLAAA 129

Query: 193 LVCFIKKRRKRVMKETDDITVDEQMHVHEDIVRGPHGEQAVLVTLEEDIHSHETLTKDEI 252
           L C++KKRRK   K  + I  DE + V E IV+GPHGEQ  +V LEEDIH  E + K E 
Sbjct: 130 LFCYLKKRRKSSTK-AEIIEFDEHLKVQETIVQGPHGEQTRVVMLEEDIHLVEDIHKTEK 182

Query: 253 VGGRTSH 257
           +  R SH
Sbjct: 190 L-SRPSH 182

[Close]

BLAST of Spo24185.1 vs. TAIR (Arabidopsis)
Match: AT1G43790.1 (tracheary element differentiation-related 6)

HSP 1 Score: 65.9 bits (159), Expect = 4.700e-11
Identity = 33/90 (36.67%), Postives = 60/90 (66.67%), Query Frame = 1


		  
Query: 160 PPPAPGHHAT-IIIVFVSLGGLFFLAFLSAALVCFIKKRRKRVMKETDDITVDEQMHVHE 219
           P P P H  T +++VFVSLG + FLAFL+  +   IKKR ++  + ++ + VDE   + E
Sbjct: 10  PTPTPDHDTTVVVVVFVSLGCVMFLAFLAFVIWFLIKKRSRKHRERSEAVRVDEHFKMKE 69

Query: 220 DIVRGPHGEQAVLVTLEEDIHSHETLTKDE 249
            IV GP+G+++V++++E+D+   + + ++E
Sbjct: 70  AIVEGPNGQKSVVLSVEDDVKIEDAIKREE 99

The following BLAST results are available for this feature:

BLAST of Spo24185.1 vs. NCBI nr
BLAST of Spo24185.1 vs. UniProtKB/TrEMBL
BLAST of Spo24185.1 vs. ExPASy Swiss-Prot
BLAST of Spo24185.1 vs. TAIR (Arabidopsis)

BLAST of Spo24185.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902172178\|gb\|KNA08087.1\|	5.2e-137	100.	hypothetical protein SOVF_1658...	[more]
gi\|731338275\|ref\|XP_010680241.1\|	2.8e-82	72.3	PREDICTED: proline-rich recept...	[more]
gi\|720087061\|ref\|XP_010244035.1\|	4.3e-30	52.2	PREDICTED: leucine-rich repeat...	[more]
gi\|590708641\|ref\|XP_007048335.1\|	1.6e-29	48.5	Tracheary element differentiat...	[more]
gi\|731430113\|ref\|XP_010664882.1\|	4.7e-29	55.8	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo24185.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QLH0_SPIOL	3.6e-137	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CAC6_BETVU	2.0e-82	72.3	Uncharacterized protein OS=Bet...	[more]
A0A061DJG3_THECC	1.1e-29	48.5	Tracheary element differentiat...	[more]
F6H0A0_VITVI	3.3e-29	55.8	Putative uncharacterized prote...	[more]
C1PGW1_ZINVI	6.2e-28	48.1	Tracheary element differentiat...	[more]

BLAST of Spo24185.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo24185.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G48920.1	4.1e-23	54.5	tracheary element differentiat...	[more]
AT1G43790.1	4.7e-11	36.6	tracheary element differentiat...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 49..65 score: 3.5E-11coord: 28..49 score: 3.5E-11coord: 67..84 score: 3.5E-11coord: 13..25 score: 3.5
None	No IPR available	PANTHER	PTHR35697	FAMILY NOT NAMED	coord: 9..262 score: 1.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0006508	proteolysis
biological_process	GO:0010623	programmed cell death involved in cell development
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005773	vacuole
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0008234	cysteine-type peptidase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12932	0.71	Barchart \| Table
Spo10274	0.69	Barchart \| Table
Spo20110	0.68	Barchart \| Table