Spo24070 (gene) | SpinachBase

Overview


Name	Spo24070
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protein ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT
Location	chr1 : 29679245 .. 29684711 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAATATAAGTCAAAAAAATATTTATTTGGCATGAAGTTTTAGAATAATAAAGTGATTTTAATTTTATCACGAACTCGATAGTCACTCAATTTATAGAACACGAGAATACACACTTATCTCAATCCAACTTTGAACCACAAATCCAATATGCAATTGACCCAAGTTCGATGTACGTCTGATCCGAACATGACCTAAATTTAATACTCACTTATCCATACTTGGCCCGAATCCGAGACTTAATTAGCCGATCCGGTAATGACCCAAACCCGAAGCAGACATTTGCCCGAACCAAATTAAACAGATAATAAACCATTTTAAACCCCAACCAGTTCTAACTGATCCCGAGAGTGACTCAGACTGAAGTTATTCGAACTGAAACCGAGTTCAATCTGAAACAATTTATGACATGAATTCATCCGAACCGATCCGAATTGGCCCGAATAAAAAGACTGGCCCGACATTAATCGACTTTGATGTGACACCGAGCCGTTTATAACCGATCTGATACCGATTCGATGACCCAATTTAACGGCCCATTAGTAATCCATCCACCATTGTTGACCTTCATCCTTCTATGACCCAAACTACACTTTCGACTTTCGAGACATGGAGCGGACATTGGGCTGAATGGGGTCCCAAATTCCCATATAAACATTACCCAAAATGCTAAAACTCTCATAACATATGGGCTAAAAAGAGCCCAATAATAATAATTAGAAAAGGAAACAAAAATAAAAAATAATAATGAGTAGAGATGCAAGTGCCAAGTCATCACTCTTTATAATTTTGGCGGTTAAGAGCCGTTAGTTTTTTCTCTCTCCTAATTTCTCTCACCCTCATCTTACAACCACCATCAACACATATACTACCACTCCCCGTAGTCCCTAACAACCAGAATTCCCTCTGAAAAATGCCTCTCAAGGCGGCGTCAATGGCGTCTTCTCCCCTCTGTGCTTGCCGGAACCATTTTCTCTCTCCTAGTCAACATCAGCAGTTAAACTTCTCCACCGTTGCTCAGCTCCCGCGTCTTTCTCCTTCTACTCTCCAAGTCAAAGATCGACTCAATTCCTCCTCCAAACGGCGGCGTTTTTTTTTCGCAGCGGAAGCCGTTGATTCTTCCTCTCCTTCCAAAATCTCAATCTCTTCCGCCGCCGCCGCTGACAAATCAATCGTCCCCGATGACCAAATTTCTCTCTCCAAGGTAGTATTTTCCATTTCATTTAACCTAATTAATTTGGATTATTGTAACTTTTGTTGTGTTGATTAAATCGTATTATACACTTGTAATGATGTAAATACGAAGTATTGGATGGTAAAATTGGAATTAGGAGTAATTTTAATTGAATGTCTTGATTGATCATTTCAATTTTCAACAATTACCTTTCTCTTTTGATGCGATGCTAATTCAATCTAGTTGAATTTCTAATAGAGCTCGTTTGATTTGGTTATTGAGAGTGTTCAAGGAGAAATATGAAACGTTGTTTAAAATTGGGGAAAAATTGGGGATAAATGGAAGTGTTTTTATTGAAAGGATAATTGAACACTGAAGTATACTTAGGAAAATTCGGGTTCGTGAAACGAAGAATATATGTGGTTATGAGAGACCTTGTGATTGTGATCTAGAGACACATTTCAATATTGATCCTTGCTGAAGTGTTATATTAATAGGGTGGGGCAATACATTTGATTGAATATCTGTTGTCAATTAAGTGTTGAATTATTGATTAGTTGATTACTGAAGGTCTACCATGCACCCATTAGGCCATTATCGAGGTTCCAGGATAATATCTACATAACTAAAACTGGATTACTTTTCACTTTTCAGATTTCATTTGGTGTCGTGGGACTTGGAAGTGGAGTCACACTACTAGCGTGAGCGCCTTGGTGGCCGTGTTTATTTAATTTCCGTCCAAGAATTATGATCTTTAGTTGTTACTTACAATGTTTCTGTTGTGCAGGTATGGTTTTGGTGCTTACTTTAATATACTACCTGGTTCAGAATGGTCAGCGATAATGTTGACTTACGGTTTCCCTGTTGCAGTTATTGGCATGGCTCTCAAGGTGAAATATCCTTCCTTTTACATATTGAACAAGAATTGCAATAATTTGGACTTCCGCATCAACATGTATTGATAATTTTCCAAGAGAGTAGAAATGGTGGTTGAAATCAAGCATTGTATTGAAGTGTATTAGCATTAATAGAGTTTCAAGTTGGAATGTTTCAGTGGCCTATATCACATTATTATTTTCAGCTTAATTTCTTGGAAATCATGTGTATGCGCTTCTTTTTTTTGTCATGATGTTGGCATTCACTTCTTGCAGTATGCAGAACTTAAACCTGTGCCATGTTTGACTTATGCTGATGCTGAAATGGTGCGGGAAAAGTGTGCCACTCCAGTTCTTAAGCAGGTTTGTTTCAGCTAAGCCGAAACTAAAACCATATAGGTGTACTGTTGCTTGCAATTTATATCCACCTTGTGCTGCGACAACCAGCTTTTTCTGTAGATGTACACAGTTGCCTCTGAATGGCTAGTAATTTTTATCTTCTCTTTCCTGAATGATTTTGGATTACCAAAATTTCTAGGTGAAAGCTGATGTTACCAGATTTCGCTATGGAGATGAACAACACCTTGATGAGGCTTTGCCACGGATTTTCCAATATAATCAGGTCTTCTTTCTGCCCTATAATGACTTTGTTAATTGATAGGATTTCAGTTGCTATTAGGGAAAAGAAACATGTGGCAGCATGGGGCTCTCTCCCCCTTTTTCTGTTAAATTTCTATCTATGTCTGCAGTCTATTCCTTCCTTTCTTTTCCAGTCATTATTGTGTGTATCATGTTGACGAAATACTATATACGACATTGTACGCATGGAAAATATCTAGACTATGGCTCATATCTTAAACTTGTCTCAAGCAGTCTATATTCCAATCAGTTAATTGGTGTAGGTGTGCAGCCAACGACAGGTCACCATTTTCTGTGAATAATTGGAATCTTCAAAGTGTTGTGCGCCATATATGAGAAAATTTCAAGTGATATAGGATGCCATAATTTTGACATCTTTCCTAATACAAGAAACTTCAATACTACGGATGAAGCTTTCCAGACCTATTATATTATTGAAGAGGTGCTACCAGAGAATCTCGAAAAACATTTAAGAAGAAACTGAGGACTTGAAATTAAGGGGATATGATCAGATGGTTATAGAACATTTAGCAAATATCAAATTTATCCTGGAGATTTACCTGGAATAAACTGACCTTGGATTGGAAATCCTTCCTTTCCTCTCCATTCATTTTGACTTACCTGAGGGTTTAGCTACTAACTCTTTTGTGCCGTATGATACTTCATTCAATCACTGGCAAATATAGAATAAAACATATGAAATCCATTTCCAGTGAAGTAATATTTATCTAGCTCTGTCCCTGCCTTTCCTGCTGCATCCAGCTTCTATCAGATTAGTATTTTCGTAAAAGCATCTGGTAAATTATCAGACCCTTATGAAGTACCTCTCTTTTATGCTCATCTTAGTTTTACGGAAGCATTCAAAGCAACAATGTAGAATATCTGTGAGTTCATGGAGAGGTACTACTGAGTACGTGATATTTTCTGTTCTGGACTTGGCTGCACTTGTTAACTTTACAAGAGGGAGCTCTCCAGTCAGATTTACCTGTCAGGAGTTTTTTTCCTCCCCATTCTGCTCAATGTAAACAGTATGCTACAGTTATCAGATACCTGAATCTTCTATTTTGTTGCAGTAAAGGCAATATGAAAGGCTAGCATGATAATGTATTATGTTCATCCGTTTTATTGACCTCAAAATGTGTCAAATTGATAAACTGATCTGACTGTACAAGTAAAACGAGTCAGCAATTCAACTAGTAGAGCGCTTAAAAATTGGACGAATATGTTGTCTTATGATGTTTACTTTTTTGTTTCTTTCAACATAGGGTGGAGGTATTCCAAGGAGAAGTGCTCCCGTCCTTAAAATGCTTCGTGAAGAGGTATGCTTTCTGTTCATATCCTAGTAAATTTTCTCTCTGATGGAACAATATACGGTTCTGTTCATACATTGTTACATTAGCCACGAGAGAATTTCTTAGAATTGGATGTTCTCCAGGGTTTATTTGGAGTTCTTTTTTAACTGTAAATGTGTCTGTGCTTTCCATCTCTGAATTTTTCTTCACTACTTTGTCTGCTATATTTTGTCTAATTGATGTGTAGGCTAGTTTTGGACAATTTACAACTCTTTTTAGGCTGGATCTTGTGTGGGCTTTGGGTCACGTTTATTGAACCTTTGTCTGCTGTCAGAAAAATAAATTCTGAAGTCGTATGCCACAATACTGTCAATACCATAAATTCTGAAAACTCTTTCCGTGCCATGCAGCCAATGAGCCAAATACAGTGATGTGCATGACATCTTAATGATTAAACTGGCTTTATTCCAATTTTTCGGATGTTGTCATCCATGACTAATTTCGGCTGATTTATTCCCATTTTTCCAGGTGACTGAAGATGACAAGTATTGCTTAGTTCTTGTATTTGAGGCAAAATCTTTGCAGCTTTCAGATTTTGAAAAAAGACAGGTAAATAAGGGTACTAACTGGAATTCATAGATCCTTTGGCTCTCTTTTAATTGTAGCATATGTTTTTGCCGTGAAACTGGCAAGTTATGTGAATATGAGTTTCTTACTTCATGTATCTGCTCCAAAAATGTTGACCTCAAACTTCTATTTCTAAAGTCCTACATCTTATTTGCAAAGTAAAATTGGTAAGAGAAAAAGAGGGGCATGCAAAACTATGCATAAATACAGACTATGTTGAATCAATCTAATTCTTTGCTTTTATTTTCTTAGGCAAAATTTGCTTCATTTTTCGGACCAGGAATTTCTGCTGAAGTTGGTAAGTAATACGAATCCTGTACCCTCTGTTATCCAATTATGAACACATGTTTAACTGTAAACATGATTCTTGCTTACTAAAAAAACACAAATCACTCGCTAGATTCACTAGATGTTGTAGTTATAGAAATGCCAATTATGTCACAAAAATCATAGGTGTGTGATAAATGCTTAATGCTTACCTGGCCATAAATTAGCCGAATACACCTTATTTCTGACTATAGTAGAGTCAAACTGCTTCTTAGTGAACATCCTAATCAACCAAATACTTGAACAGAAGCTGGGAAATACTGTTTGGTATAGAACTAGGTCGTAACGGAGTATGATGTGCTCTGTATCAGTACGATTGGATTTTTTGTAACATAATTCTTCTCTAAGTACTACTTCGTAATAGACAGGTAAAGGACCAAATGATGTTTTTTTTTTGTAGAATCCCTAGATGATGTGATAATTTCTTTTCACTTACAGGTAAAGGAGAAAATGATCTCTTCGAAGTTCGTCTCATATCTAATACACAAGCATAAAGGAGCAACCAATTGTAAGGCAACTACTTCTAAGTTCTAG

mRNA sequence

AGTAATATAAGTCAAAAAAATATTTATTTGGCATGAAGTTTTAGAATAATAAAGTGATTTTAATTTTATCACGAACTCGATAGTCACTCAATTTATAGAACACGAGAATACACACTTATCTCAATCCAACTTTGAACCACAAATCCAATATGCAATTGACCCAAGTTCGATGTACGTCTGATCCGAACATGACCTAAATTTAATACTCACTTATCCATACTTGGCCCGAATCCGAGACTTAATTAGCCGATCCGGTAATGACCCAAACCCGAAGCAGACATTTGCCCGAACCAAATTAAACAGATAATAAACCATTTTAAACCCCAACCAGTTCTAACTGATCCCGAGAGTGACTCAGACTGAAGTTATTCGAACTGAAACCGAGTTCAATCTGAAACAATTTATGACATGAATTCATCCGAACCGATCCGAATTGGCCCGAATAAAAAGACTGGCCCGACATTAATCGACTTTGATGTGACACCGAGCCGTTTATAACCGATCTGATACCGATTCGATGACCCAATTTAACGGCCCATTAGTAATCCATCCACCATTGTTGACCTTCATCCTTCTATGACCCAAACTACACTTTCGACTTTCGAGACATGGAGCGGACATTGGGCTGAATGGGGTCCCAAATTCCCATATAAACATTACCCAAAATGCTAAAACTCTCATAACATATGGGCTAAAAAGAGCCCAATAATAATAATTAGAAAAGGAAACAAAAATAAAAAATAATAATGAGTAGAGATGCAAGTGCCAAGTCATCACTCTTTATAATTTTGGCGGTTAAGAGCCGTTAGTTTTTTCTCTCTCCTAATTTCTCTCACCCTCATCTTACAACCACCATCAACACATATACTACCACTCCCCGTAGTCCCTAACAACCAGAATTCCCTCTGAAAAATGCCTCTCAAGGCGGCGTCAATGGCGTCTTCTCCCCTCTGTGCTTGCCGGAACCATTTTCTCTCTCCTAGTCAACATCAGCAGTTAAACTTCTCCACCGTTGCTCAGCTCCCGCGTCTTTCTCCTTCTACTCTCCAAGTCAAAGATCGACTCAATTCCTCCTCCAAACGGCGGCGTTTTTTTTTCGCAGCGGAAGCCGTTGATTCTTCCTCTCCTTCCAAAATCTCAATCTCTTCCGCCGCCGCCGCTGACAAATCAATCGTCCCCGATGACCAAATTTCTCTCTCCAAGATTTCATTTGGTGTCGTGGGACTTGGAAGTGGAGTCACACTACTAGCGTATGGTTTTGGTGCTTACTTTAATATACTACCTGGTTCAGAATGGTCAGCGATAATGTTGACTTACGGTTTCCCTGTTGCAGTTATTGGCATGGCTCTCAAGTATGCAGAACTTAAACCTGTGCCATGTTTGACTTATGCTGATGCTGAAATGGTGCGGGAAAAGTGTGCCACTCCAGTTCTTAAGCAGGTGAAAGCTGATGTTACCAGATTTCGCTATGGAGATGAACAACACCTTGATGAGGCTTTGCCACGGATTTTCCAATATAATCAGGGTGGAGGTATTCCAAGGAGAAGTGCTCCCGTCCTTAAAATGCTTCGTGAAGAGGTGACTGAAGATGACAAGTATTGCTTAGTTCTTGTATTTGAGGCAAAATCTTTGCAGCTTTCAGATTTTGAAAAAAGACAGGCAAAATTTGCTTCATTTTTCGGACCAGGAATTTCTGCTGAAGTTGAATCCCTAGATGATGTGATAATTTCTTTTCACTTACAGGTAAAGGAGAAAATGATCTCTTCGAAGTTCGTCTCATATCTAATACACAAGCATAAAGGAGCAACCAATTGTAAGGCAACTACTTCTAAGTTCTAG

Coding sequence (CDS)

ATGCCTCTCAAGGCGGCGTCAATGGCGTCTTCTCCCCTCTGTGCTTGCCGGAACCATTTTCTCTCTCCTAGTCAACATCAGCAGTTAAACTTCTCCACCGTTGCTCAGCTCCCGCGTCTTTCTCCTTCTACTCTCCAAGTCAAAGATCGACTCAATTCCTCCTCCAAACGGCGGCGTTTTTTTTTCGCAGCGGAAGCCGTTGATTCTTCCTCTCCTTCCAAAATCTCAATCTCTTCCGCCGCCGCCGCTGACAAATCAATCGTCCCCGATGACCAAATTTCTCTCTCCAAGATTTCATTTGGTGTCGTGGGACTTGGAAGTGGAGTCACACTACTAGCGTATGGTTTTGGTGCTTACTTTAATATACTACCTGGTTCAGAATGGTCAGCGATAATGTTGACTTACGGTTTCCCTGTTGCAGTTATTGGCATGGCTCTCAAGTATGCAGAACTTAAACCTGTGCCATGTTTGACTTATGCTGATGCTGAAATGGTGCGGGAAAAGTGTGCCACTCCAGTTCTTAAGCAGGTGAAAGCTGATGTTACCAGATTTCGCTATGGAGATGAACAACACCTTGATGAGGCTTTGCCACGGATTTTCCAATATAATCAGGGTGGAGGTATTCCAAGGAGAAGTGCTCCCGTCCTTAAAATGCTTCGTGAAGAGGTGACTGAAGATGACAAGTATTGCTTAGTTCTTGTATTTGAGGCAAAATCTTTGCAGCTTTCAGATTTTGAAAAAAGACAGGCAAAATTTGCTTCATTTTTCGGACCAGGAATTTCTGCTGAAGTTGAATCCCTAGATGATGTGATAATTTCTTTTCACTTACAGGTAAAGGAGAAAATGATCTCTTCGAAGTTCGTCTCATATCTAATACACAAGCATAAAGGAGCAACCAATTGTAAGGCAACTACTTCTAAGTTCTAG

Protein sequence

MPLKAASMASSPLCACRNHFLSPSQHQQLNFSTVAQLPRLSPSTLQVKDRLNSSSKRRRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFGAYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQVKADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEAKSLQLSDFEKRQAKFASFFGPGISAEVESLDDVIISFHLQVKEKMISSKFVSYLIHKHKGATNCKATTSKF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24070.1	Spo24070.1	mRNA

Homology

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BLAST of Spo24070.1 vs. NCBI nr
Match: gi|902078335|gb|KNA03102.1| (hypothetical protein SOVF_212350 [Spinacia oleracea])

HSP 1 Score: 510.0 bits (1312), Expect = 2.900e-141
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1


		  
Query: 1   MPLKAASMASSPLCACRNHFLSPSQHQQLNFSTVAQLPRLSPSTLQVKDRLNSSSKRRRF 60
           MPLKAASMASSPLCACRNHFLSPSQHQQLNFSTVAQLPRLSPSTLQVKDRLNSSSKRRRF
Sbjct: 1   MPLKAASMASSPLCACRNHFLSPSQHQQLNFSTVAQLPRLSPSTLQVKDRLNSSSKRRRF 60

Query: 61  FFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFGAYF 120
           FFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFGAYF
Sbjct: 61  FFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFGAYF 120

Query: 121 NILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQVKAD 180
           NILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQVKAD
Sbjct: 121 NILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQVKAD 180

Query: 181 VTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEAKSL 240
           VTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEAKSL
Sbjct: 181 VTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEAKSL 240

Query: 241 QLSDFEKRQAKFASFFGPGISAEV 265
           QLSDFEKRQAKFASFFGPGISAEV
Sbjct: 241 QLSDFEKRQAKFASFFGPGISAEV 264

[Close]

BLAST of Spo24070.1 vs. NCBI nr
Match: gi|731315716|ref|XP_010692659.1| (PREDICTED: uncharacterized protein LOC104905741 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 404.1 bits (1037), Expect = 2.300e-109
Identity = 210/270 (77.78%), Postives = 234/270 (86.67%), Query Frame = 1


		  
Query: 1   MPLKAASMASSPLCACRNHFLSPSQH------QQLNFSTVAQLPRLSPSTLQVKDRLNSS 60
           MPL+AASMA +PLCACRNHFLSPSQH      QQ  FS + +LP LS STL +KDRLNSS
Sbjct: 1   MPLRAASMAVTPLCACRNHFLSPSQHHHHHQQQQFQFSAITKLPVLSSSTLLLKDRLNSS 60

Query: 61  SKRRRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAY 120
           SKR+RF   AEAVDSSS   I       +DKSI+ DD+ SLSKISFG+VGLGSGVTLLAY
Sbjct: 61  SKRQRFNLVAEAVDSSSQPSI------VSDKSIISDDEGSLSKISFGLVGLGSGVTLLAY 120

Query: 121 GFGAYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVL 180
           GFGAYFNILPGSEWSA+MLTYGFPVAVIGMAL+YAELKPVPC+ Y+DA+M+REKCATPVL
Sbjct: 121 GFGAYFNILPGSEWSALMLTYGFPVAVIGMALQYAELKPVPCVVYSDAQMLREKCATPVL 180

Query: 181 KQVKADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLV 240
           KQVK+DVTR+RYGDEQHLDEAL RIFQY QGGGI RRSAPVLK +REEVT D KYCLVL+
Sbjct: 181 KQVKSDVTRYRYGDEQHLDEALKRIFQYGQGGGISRRSAPVLKKIREEVTGDGKYCLVLM 240

Query: 241 FEAKSLQLSDFEKRQAKFASFFGPGISAEV 265
           FEAK+LQLSDFE+RQAKFASFFGPGI+AE+
Sbjct: 241 FEAKALQLSDFEQRQAKFASFFGPGITAEI 264

[Close]

BLAST of Spo24070.1 vs. NCBI nr
Match: gi|629103427|gb|KCW68896.1| (hypothetical protein EUGRSUZ_F02481 [Eucalyptus grandis])

HSP 1 Score: 326.6 bits (836), Expect = 4.600e-86
Identity = 160/207 (77.29%), Postives = 184/207 (88.89%), Query Frame = 1


		  
Query: 58  RRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFG 117
           R+  F A A DS+ P        A+A K+I+PDD+ SL+K+SFGV+GLG GV+LL+YGFG
Sbjct: 119 RKLAFVARAADSTQP--------ASAGKAIIPDDEFSLAKVSFGVIGLGVGVSLLSYGFG 178

Query: 118 AYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQV 177
           AYFNILPGSEWSA+MLTYGFP+A+IGMALKYAELKPVPCLTY DA+M+RE CATP+LKQV
Sbjct: 179 AYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYTDAQMLRENCATPILKQV 238

Query: 178 KADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEA 237
           ++DV R+RYGDEQHLDEAL RIFQY QGGGIPRRSAPVLKM+REEVTE+ KYCLVLVFEA
Sbjct: 239 RSDVIRYRYGDEQHLDEALKRIFQYGQGGGIPRRSAPVLKMIREEVTEEGKYCLVLVFEA 298

Query: 238 KSLQLSDFEKRQAKFASFFGPGISAEV 265
           K+LQLSDFE+RQAKFASFFGPGISAEV
Sbjct: 299 KALQLSDFEQRQAKFASFFGPGISAEV 317

[Close]

BLAST of Spo24070.1 vs. NCBI nr
Match: gi|702372239|ref|XP_010061866.1| (PREDICTED: uncharacterized protein LOC104449417 [Eucalyptus grandis])

HSP 1 Score: 326.6 bits (836), Expect = 4.600e-86
Identity = 160/207 (77.29%), Postives = 184/207 (88.89%), Query Frame = 1


		  
Query: 58  RRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFG 117
           R+  F A A DS+ P        A+A K+I+PDD+ SL+K+SFGV+GLG GV+LL+YGFG
Sbjct: 69  RKLAFVARAADSTQP--------ASAGKAIIPDDEFSLAKVSFGVIGLGVGVSLLSYGFG 128

Query: 118 AYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQV 177
           AYFNILPGSEWSA+MLTYGFP+A+IGMALKYAELKPVPCLTY DA+M+RE CATP+LKQV
Sbjct: 129 AYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYTDAQMLRENCATPILKQV 188

Query: 178 KADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEA 237
           ++DV R+RYGDEQHLDEAL RIFQY QGGGIPRRSAPVLKM+REEVTE+ KYCLVLVFEA
Sbjct: 189 RSDVIRYRYGDEQHLDEALKRIFQYGQGGGIPRRSAPVLKMIREEVTEEGKYCLVLVFEA 248

Query: 238 KSLQLSDFEKRQAKFASFFGPGISAEV 265
           K+LQLSDFE+RQAKFASFFGPGISAEV
Sbjct: 249 KALQLSDFEQRQAKFASFFGPGISAEV 267

[Close]

BLAST of Spo24070.1 vs. NCBI nr
Match: gi|629103428|gb|KCW68897.1| (hypothetical protein EUGRSUZ_F02481 [Eucalyptus grandis])

HSP 1 Score: 325.1 bits (832), Expect = 1.300e-85
Identity = 159/206 (77.18%), Postives = 183/206 (88.83%), Query Frame = 1


		  
Query: 58  RRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFG 117
           R+  F A A DS+ P        A+A K+I+PDD+ SL+K+SFGV+GLG GV+LL+YGFG
Sbjct: 119 RKLAFVARAADSTQP--------ASAGKAIIPDDEFSLAKVSFGVIGLGVGVSLLSYGFG 178

Query: 118 AYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQV 177
           AYFNILPGSEWSA+MLTYGFP+A+IGMALKYAELKPVPCLTY DA+M+RE CATP+LKQV
Sbjct: 179 AYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYTDAQMLRENCATPILKQV 238

Query: 178 KADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEA 237
           ++DV R+RYGDEQHLDEAL RIFQY QGGGIPRRSAPVLKM+REEVTE+ KYCLVLVFEA
Sbjct: 239 RSDVIRYRYGDEQHLDEALKRIFQYGQGGGIPRRSAPVLKMIREEVTEEGKYCLVLVFEA 298

Query: 238 KSLQLSDFEKRQAKFASFFGPGISAE 264
           K+LQLSDFE+RQAKFASFFGPGISAE
Sbjct: 299 KALQLSDFEQRQAKFASFFGPGISAE 316

[Close]

BLAST of Spo24070.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7C4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212350 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 2.000e-141
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1


		  
Query: 1   MPLKAASMASSPLCACRNHFLSPSQHQQLNFSTVAQLPRLSPSTLQVKDRLNSSSKRRRF 60
           MPLKAASMASSPLCACRNHFLSPSQHQQLNFSTVAQLPRLSPSTLQVKDRLNSSSKRRRF
Sbjct: 1   MPLKAASMASSPLCACRNHFLSPSQHQQLNFSTVAQLPRLSPSTLQVKDRLNSSSKRRRF 60

Query: 61  FFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFGAYF 120
           FFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFGAYF
Sbjct: 61  FFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFGAYF 120

Query: 121 NILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQVKAD 180
           NILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQVKAD
Sbjct: 121 NILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQVKAD 180

Query: 181 VTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEAKSL 240
           VTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEAKSL
Sbjct: 181 VTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEAKSL 240

Query: 241 QLSDFEKRQAKFASFFGPGISAEV 265
           QLSDFEKRQAKFASFFGPGISAEV
Sbjct: 241 QLSDFEKRQAKFASFFGPGISAEV 264

[Close]

BLAST of Spo24070.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CY47_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g026500 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.600e-109
Identity = 210/270 (77.78%), Postives = 234/270 (86.67%), Query Frame = 1


		  
Query: 1   MPLKAASMASSPLCACRNHFLSPSQH------QQLNFSTVAQLPRLSPSTLQVKDRLNSS 60
           MPL+AASMA +PLCACRNHFLSPSQH      QQ  FS + +LP LS STL +KDRLNSS
Sbjct: 1   MPLRAASMAVTPLCACRNHFLSPSQHHHHHQQQQFQFSAITKLPVLSSSTLLLKDRLNSS 60

Query: 61  SKRRRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAY 120
           SKR+RF   AEAVDSSS   I       +DKSI+ DD+ SLSKISFG+VGLGSGVTLLAY
Sbjct: 61  SKRQRFNLVAEAVDSSSQPSI------VSDKSIISDDEGSLSKISFGLVGLGSGVTLLAY 120

Query: 121 GFGAYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVL 180
           GFGAYFNILPGSEWSA+MLTYGFPVAVIGMAL+YAELKPVPC+ Y+DA+M+REKCATPVL
Sbjct: 121 GFGAYFNILPGSEWSALMLTYGFPVAVIGMALQYAELKPVPCVVYSDAQMLREKCATPVL 180

Query: 181 KQVKADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLV 240
           KQVK+DVTR+RYGDEQHLDEAL RIFQY QGGGI RRSAPVLK +REEVT D KYCLVL+
Sbjct: 181 KQVKSDVTRYRYGDEQHLDEALKRIFQYGQGGGISRRSAPVLKKIREEVTGDGKYCLVLM 240

Query: 241 FEAKSLQLSDFEKRQAKFASFFGPGISAEV 265
           FEAK+LQLSDFE+RQAKFASFFGPGI+AE+
Sbjct: 241 FEAKALQLSDFEQRQAKFASFFGPGITAEI 264

[Close]

BLAST of Spo24070.1 vs. UniProtKB/TrEMBL
Match: A0A059BSI1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02481 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.200e-86
Identity = 160/207 (77.29%), Postives = 184/207 (88.89%), Query Frame = 1


		  
Query: 58  RRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFG 117
           R+  F A A DS+ P        A+A K+I+PDD+ SL+K+SFGV+GLG GV+LL+YGFG
Sbjct: 119 RKLAFVARAADSTQP--------ASAGKAIIPDDEFSLAKVSFGVIGLGVGVSLLSYGFG 178

Query: 118 AYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQV 177
           AYFNILPGSEWSA+MLTYGFP+A+IGMALKYAELKPVPCLTY DA+M+RE CATP+LKQV
Sbjct: 179 AYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYTDAQMLRENCATPILKQV 238

Query: 178 KADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEA 237
           ++DV R+RYGDEQHLDEAL RIFQY QGGGIPRRSAPVLKM+REEVTE+ KYCLVLVFEA
Sbjct: 239 RSDVIRYRYGDEQHLDEALKRIFQYGQGGGIPRRSAPVLKMIREEVTEEGKYCLVLVFEA 298

Query: 238 KSLQLSDFEKRQAKFASFFGPGISAEV 265
           K+LQLSDFE+RQAKFASFFGPGISAEV
Sbjct: 299 KALQLSDFEQRQAKFASFFGPGISAEV 317

[Close]

BLAST of Spo24070.1 vs. UniProtKB/TrEMBL
Match: A0A059BS19_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02481 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 9.300e-86
Identity = 159/206 (77.18%), Postives = 183/206 (88.83%), Query Frame = 1


		  
Query: 58  RRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAYGFG 117
           R+  F A A DS+ P        A+A K+I+PDD+ SL+K+SFGV+GLG GV+LL+YGFG
Sbjct: 119 RKLAFVARAADSTQP--------ASAGKAIIPDDEFSLAKVSFGVIGLGVGVSLLSYGFG 178

Query: 118 AYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVLKQV 177
           AYFNILPGSEWSA+MLTYGFP+A+IGMALKYAELKPVPCLTY DA+M+RE CATP+LKQV
Sbjct: 179 AYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYTDAQMLRENCATPILKQV 238

Query: 178 KADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLVFEA 237
           ++DV R+RYGDEQHLDEAL RIFQY QGGGIPRRSAPVLKM+REEVTE+ KYCLVLVFEA
Sbjct: 239 RSDVIRYRYGDEQHLDEALKRIFQYGQGGGIPRRSAPVLKMIREEVTEEGKYCLVLVFEA 298

Query: 238 KSLQLSDFEKRQAKFASFFGPGISAE 264
           K+LQLSDFE+RQAKFASFFGPGISAE
Sbjct: 299 KALQLSDFEQRQAKFASFFGPGISAE 316

[Close]

BLAST of Spo24070.1 vs. UniProtKB/TrEMBL
Match: A0A068U2M6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040293001 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.700e-84
Identity = 172/278 (61.87%), Postives = 211/278 (75.90%), Query Frame = 1


		  
Query: 1   MPLKAASMASSP-----------LCACRNHFL---SPSQHQQLNFSTVAQLPRLSPSTLQ 60
           M + + +MA++P              C   FL   + S  Q LN +T    P  S   + 
Sbjct: 1   MAMNSTAMAATPSLPTTAGGGGRTVPCSPRFLQCCNCSYLQYLNRATTHSRPDSSLYAII 60

Query: 61  VKDRLNSSSKRRRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLG 120
            +   +  + R R  F  +A DS+ P+    +S  +ADKS+VPDD+ SL+K+SFGV+GLG
Sbjct: 61  QERTTHHHNLRFRPIF--KAADSTQPT----TSTTSADKSLVPDDEFSLAKVSFGVIGLG 120

Query: 121 SGVTLLAYGFGAYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVR 180
            G+TLL+YGFGAYFNILPGSEWSA+MLTYGFP+ +IGMALKYAELKPVPCLT++DA+ +R
Sbjct: 121 GGITLLSYGFGAYFNILPGSEWSALMLTYGFPLTIIGMALKYAELKPVPCLTHSDAQKLR 180

Query: 181 EKCATPVLKQVKADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTED 240
           E CATP LKQV++DVTR+RYGDEQHLDEAL RIFQY QGGGIPRRSAPVL+M+REEVTED
Sbjct: 181 ESCATPTLKQVRSDVTRYRYGDEQHLDEALKRIFQYGQGGGIPRRSAPVLQMIREEVTED 240

Query: 241 DKYCLVLVFEAKSLQLSDFEKRQAKFASFFGPGISAEV 265
            KYCL+LVFEAK+LQLSDFE+RQAKFASFFGPGI+AEV
Sbjct: 241 GKYCLILVFEAKALQLSDFEQRQAKFASFFGPGITAEV 272

[Close]

BLAST of Spo24070.1 vs. ExPASy Swiss-Prot
Match: Y575_SYNY3 (Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0575 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.100e-20
Identity = 68/184 (36.96%), Postives = 97/184 (52.72%), Query Frame = 1


		  
Query: 95  LSKISFGVVGLGSGVTLLAYGFGAYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPV 154
           L KIS   VGL  G  L   GF AY   L  +  +     YG P+ + G+ALK AELKP+
Sbjct: 2   LPKISLAAVGLTVGGILTITGFVAY--ALDYATLNLAGFFYGIPLVLGGLALKAAELKPI 61

Query: 155 PCLTYADAEMV--REKCATPVLKQVKADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRS 214
           P       +++  R + ATP   Q++ DVTR+RYG E HLDE+L R+     G       
Sbjct: 62  PFSQPTSEKIIALRNQLATPTQNQIRKDVTRYRYGQEAHLDESLERL-----GLSPTDEE 121

Query: 215 APVLKMLREEVTEDDKYCLVLVFEAKSLQLSDFEKRQAKFASFFGPGISAEVESLDDVII 274
            PVL  L E+  E  KY L L F +  + L  ++++Q K A FFGP +   V   ++ ++
Sbjct: 122 RPVLTSLLEQDWE-GKYVLTLTFTSPFISLETWQEKQEKIAKFFGPDLEVTVAEPEEKVV 177

Query: 275 SFHL 277
           + +L
Sbjct: 182 TVNL 177

[Close]

BLAST of Spo24070.1 vs. TAIR (Arabidopsis)
Match: AT5G38660.1 (acclimation of photosynthesis to environment)

HSP 1 Score: 292.7 bits (748), Expect = 2.600e-79
Identity = 141/210 (67.14%), Postives = 177/210 (84.29%), Query Frame = 1


		  
Query: 55  SKRRRFFFAAEAVDSSSPSKISISSAAAADKSIVPDDQISLSKISFGVVGLGSGVTLLAY 114
           ++ +R     + V  ++ S  S  S A+ D++++PDD+ +L+KISFGV+GLG GV+LL+Y
Sbjct: 51  TRLKREVLKLDVVGRAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSY 110

Query: 115 GFGAYFNILPGSEWSAIMLTYGFPVAVIGMALKYAELKPVPCLTYADAEMVREKCATPVL 174
           GFGAYF ILPG+EWSAIMLTYGFP+++IGMALKYAELKPVPCL+Y+DA  +RE CATP+L
Sbjct: 111 GFGAYFTILPGTEWSAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPIL 170

Query: 175 KQVKADVTRFRYGDEQHLDEALPRIFQYNQGGGIPRRSAPVLKMLREEVTEDDKYCLVLV 234
            QV+ DVTR+RYGDEQHL+EAL RIFQY  GGGIPRRSAP+L+++REEV  D +YC+VLV
Sbjct: 171 TQVRNDVTRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLV 230

Query: 235 FEAKSLQLSDFEKRQAKFASFFGPGISAEV 265
           FEAK+L LSDFEKRQAKF SFFGP I+AEV
Sbjct: 231 FEAKALTLSDFEKRQAKFTSFFGPNITAEV 260

The following BLAST results are available for this feature:

BLAST of Spo24070.1 vs. NCBI nr
BLAST of Spo24070.1 vs. UniProtKB/TrEMBL
BLAST of Spo24070.1 vs. ExPASy Swiss-Prot
BLAST of Spo24070.1 vs. TAIR (Arabidopsis)

BLAST of Spo24070.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902078335\|gb\|KNA03102.1\|	2.9e-141	100.	hypothetical protein SOVF_2123...	[more]
gi\|731315716\|ref\|XP_010692659.1\|	2.3e-109	77.7	PREDICTED: uncharacterized pro...	[more]
gi\|629103427\|gb\|KCW68896.1\|	4.6e-86	77.2	hypothetical protein EUGRSUZ_F...	[more]
gi\|702372239\|ref\|XP_010061866.1\|	4.6e-86	77.2	PREDICTED: uncharacterized pro...	[more]
gi\|629103428\|gb\|KCW68897.1\|	1.3e-85	77.1	hypothetical protein EUGRSUZ_F...	[more]

BLAST of Spo24070.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9Q7C4_SPIOL	2.0e-141	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CY47_BETVU	1.6e-109	77.7	Uncharacterized protein OS=Bet...	[more]
A0A059BSI1_EUCGR	3.2e-86	77.2	Uncharacterized protein OS=Euc...	[more]
A0A059BS19_EUCGR	9.3e-86	77.1	Uncharacterized protein OS=Euc...	[more]
A0A068U2M6_COFCA	1.7e-84	61.8	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo24070.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
Y575_SYNY3	1.1e-20	36.9	Thylakoid membrane protein slr...	[more]

BLAST of Spo24070.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G38660.1	2.6e-79	67.1	acclimation of photosynthesis ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021275	Protein of unknown function DUF2854	PFAM	PF11016	DUF2854	coord: 114..264 score: 1.3
None	No IPR available	PANTHER	PTHR35551	FAMILY NOT NAMED	coord: 55..264 score: 5.3E
None	No IPR available	PANTHER	PTHR35551:SF1	SUBFAMILY NOT NAMED	coord: 55..264 score: 5.3E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006591	ornithine metabolic process
biological_process	GO:0006526	arginine biosynthetic process
biological_process	GO:0051726	regulation of cell cycle
biological_process	GO:0001558	regulation of cell growth
biological_process	GO:0007088	regulation of mitotic nuclear division
biological_process	GO:0050684	regulation of mRNA processing
biological_process	GO:0019643	reductive tricarboxylic acid cycle
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006097	glyoxylate cycle
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0019605	butyrate metabolic process
biological_process	GO:0006083	acetate metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0050992	dimethylallyl diphosphate biosynthetic process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:2001234	negative regulation of apoptotic signaling pathway
biological_process	GO:0009637	response to blue light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0030154	cell differentiation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009657	plastid organization
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0010218	response to far red light
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0010114	response to red light
biological_process	GO:0001824	blastocyst development
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0015693	magnesium ion transport
biological_process	GO:0009744	response to sucrose
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0009987	cellular process
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0009409	response to cold
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0015979	photosynthesis
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0006457	protein folding
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0046500	S-adenosylmethionine metabolic process
biological_process	GO:0006479	protein methylation
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0009056	catabolic process
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0042430	indole-containing compound metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0042255	ribosome assembly
biological_process	GO:1901575	organic substance catabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0009536	plastid
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005773	vacuole
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009348	ornithine carbamoyltransferase complex
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0003779	actin binding
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function	GO:0030234	enzyme regulator activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0047760	butyrate-CoA ligase activity
molecular_function	GO:0003987	acetate-CoA ligase activity
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004693	cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0008756	o-succinylbenzoate-CoA ligase activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0015095	magnesium ion transmembrane transporter activity
molecular_function	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0004585	ornithine carbamoyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo24046	0.81	Barchart \| Table
Spo05103	0.75	Barchart \| Table
Spo20057	0.74	Barchart \| Table
Spo00121	0.74	Barchart \| Table
Spo17860	0.74	Barchart \| Table
Spo10235	0.73	Barchart \| Table
Spo21215	0.73	Barchart \| Table
Spo25159	0.72	Barchart \| Table
Spo05073	0.71	Barchart \| Table
Spo09335	0.71	Barchart \| Table
Spo14678	0.71	Barchart \| Table
Spo20869	0.70	Barchart \| Table
Spo21398	0.70	Barchart \| Table
Spo08811	0.69	Barchart \| Table
Spo02554	0.69	Barchart \| Table
Spo03335	0.69	Barchart \| Table
Spo06293	0.69	Barchart \| Table
Spo08789	0.69	Barchart \| Table
Spo10373	0.69	Barchart \| Table
Spo20651	0.68	Barchart \| Table
Spo04673	0.68	Barchart \| Table
Spo28324	0.68	Barchart \| Table
Spo26117	0.68	Barchart \| Table
Spo10471	0.68	Barchart \| Table
Spo02573	0.68	Barchart \| Table
Spo21021	0.68	Barchart \| Table
Spo23800	0.67	Barchart \| Table
Spo05013	0.67	Barchart \| Table
Spo19812	0.67	Barchart \| Table
Spo04653	0.67	Barchart \| Table
Spo07376	0.67	Barchart \| Table
Spo10950	0.67	Barchart \| Table
Spo14087	0.67	Barchart \| Table
Spo09232	0.67	Barchart \| Table
Spo09554	0.67	Barchart \| Table
Spo26887	0.66	Barchart \| Table
Spo07603	0.66	Barchart \| Table
Spo14416	0.66	Barchart \| Table
Spo05496	0.66	Barchart \| Table
Spo16079	0.66	Barchart \| Table
Spo22479	0.66	Barchart \| Table
Spo00895	0.66	Barchart \| Table
Spo00357	0.66	Barchart \| Table
Spo07663	0.66	Barchart \| Table
Spo24425	0.65	Barchart \| Table
Spo08654	0.65	Barchart \| Table
Spo19431	0.65	Barchart \| Table
Spo10092	0.65	Barchart \| Table
Spo05296	0.65	Barchart \| Table
Spo26146	0.65	Barchart \| Table