Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTGTCTCTCTCTTCAATCTTTCCTATTTAAACCACAAAACCCCTCAATCTATCCAATACAACTTTTCCAAACAACAATGGCGGAAATTGAGAACAAACCCCAAAACTCAATCTCTCAGCAATGGCGGAAAAATCCAGAGTTGGAAGGCAAAGTAGTGATGGTTACTGGAGCATCATCAGGTCTCGGGAGAGAATTCTGCCTTGATCTCGCCAAATCTGGTTGCAAAATCATTGCCGCTGCTCGCCGCATTGATCGCCTCCAATCTCTTTGCGATCATATCAATTCTCTCTCCTCTTCTTCATCTTCTTCTTCTTCCTCCGTGAGTGATGGTGGTAACGGTGGTGGTGTGAGAGCGGTGGCGGTTGAGCTTGATGTTACTGCCGACGGAAAGTCGATTGATGCGTCGGTTCATAAGGCTTGGGAGGCTTTTGGTTGTATTAATGCTCTTATTAACAACGCCGGCATTCGCGGTAATCTTCTCTCTCCTTACTCTCTCGCTTAGTCTCTTACAAAAATGATTTGAGCTTGTCGAGGCCATTAAGCATTGTTTATTGGTTGGTTCAAGTGAAGAGTTGATCTAACTGATGAAATTATTGCGTCGTAATATTGTTGAATCTGTGTGCTTATATGAAGTTTGATGTATGATGTAATGTGCTTATTGTGGATTAACATGTACTCCGTTGTTGTTACTCGTAGTTAAGTAGTTGGAGTTGTACAACTTTAAGTGTGTGAGGTTTTTGTATGATCCTATGTTCCTCTATGCATTAAAAGATCAATAATTATAGGTTTCTGTCTTTCTGGTCATCTTGAGCCTGTATAGCATTCTTTTACTTATCTCGTTGATGAACTGTCTTGTTTATATCATTATGGGCATGTTTGGTATAACTTTAGGAAAGGAAATGGAAAGGAAATAAATAAGAAGGGGAAGGGTAATGTTAACTACTATCATTATAAGTTGTTTATATACCTTAGACAAAGAATCATTTGTAACAAGTAGGGATTCCTGAGAGTAATAATTTTGTTACCATGGGGTTGAGAGAGATAACAAATGGTGGTAATGGTTACACTTAGGGCATGCTTGGATTGAGGGTAATGTATTAAAGGGGTAATAAAAGTCAAACTAAGGTAATTGAAGGTGATGATGAGGGGATGAAGTGGTGGCAAAGGGAACAAGCTAGTGTTGGCAAGAAGAAAATAAAAGGGAATGGGGAACAAATACTCTCATCATGGGGGGAATAGTTACCCACCATCCCACTAGGGTGATTATTACCCTCATTTCGGGGGTAATTACTTCCTCCCTTCCTCCCTTCTTCTCACAACACCACCACTACCACAACTTCTCATCACAATACCACCACACCACCCTCCTTGCAACCACCTCAATTCACCTTCATTGTCCTTTTATTATGGTGGTTTGACTTTTATTACCCCATAATCCATTACACCCAATCCAAGCGTGCCCTTAGGAAAGAAATTGTGTTACCACACCTCTTATATCAAACATTAGGTAATGAAAATAGTTACTTGATTCCATATGACAAGAAGAAATATGTTTGTGTCAGATGTCACTATGTTTAAAAGGCTTCATGGATGATAATCAATTTTTAATTTGTGTTGTAGGTAATGTGAAAACTTCATTAGATGTGTCTGAGGAAGAATGGGATAACACCTTCAAAACTAATTTGACGGGAGCCTGGTTAGTTTCGAAGTCCGTATGTATTCGCATGCGTGATGCAAAGATAGGAGGGTCAATTATCAATATATCTTCAATTGCCGGTCTCAACAGAGGCCATTTACCTGGCTCCGCCGCCTACTCTGCATCAAAGACAGGCCTAAATACATTGACCAAGGTATTGGTATTTTACATGAGCCAGTGAGCCACCTAATGATATTACCAGACAATTGATGCTTATATGCTAGTGTCCTTCTAACTACTTTCAAATAGGATTGCCCCAATATTGGATTCTAAATAATATTGATATCTTGTTCAATTTATGGAAACATAGAACATAAAAGCATTTACCTTGAGTATCCATGACCATTGTTAGATTGTATATTTAACTGGGAATCATTTATTGCTCAGAAAATTTAGACTAGGAGGTTGGTCACTGATAAATAAGTTCTTGTCACAGGTATATTGTGCGAATTTTTATTAAGTATTTCAGAAATGATTATCCTTTTTGAGCACTGAGTGTAATGGTGATGCAAGCAGTCATAACCTCGATAAAATGTTTTAAGTTTTATGTTAGATAGACACTTCTCCTCCACACAACACCTTACAGAAGAATCAGCAGTAGTGAGCTGAAGTCACTCAGAGTAATTTGTAGGATATCAACAAGAAAAATTAATCGTTGAGGACAAGGGATTATTTTTTGGGTGGCGGGGGGAGATTAACAAGAAAAATTAATCGTTGAGGACAAGGGGTTATTTTTTTACGTGTGATTATCTAATGATGTGTGATGTTGCAGATGATGGCCCTGGAATTGGGTATGTATAAGATTCGAATTAACTCAATATCACCTGGACTATTCAAATCAGAGATCACTGAGAATCTTATGGAAAAGGACTGGCTTAACAAGGTTTCCATGAAAACCGTTCCTCTGCAGACATTTGGCACATCTGATCCAGCCTTAACATCTCTTGTCCGATACTTGATCTATGACTCCTCAGAGTACGTAACAGGCAATATGTTCATCGTAGATGCTGGTGCCACTCTACCTGGTGTCCCTATTTTTTCTTCCCTCTAG TCTGTCTCTCTCTTCAATCTTTCCTATTTAAACCACAAAACCCCTCAATCTATCCAATACAACTTTTCCAAACAACAATGGCGGAAATTGAGAACAAACCCCAAAACTCAATCTCTCAGCAATGGCGGAAAAATCCAGAGTTGGAAGGCAAAGTAGTGATGGTTACTGGAGCATCATCAGGTCTCGGGAGAGAATTCTGCCTTGATCTCGCCAAATCTGGTTGCAAAATCATTGCCGCTGCTCGCCGCATTGATCGCCTCCAATCTCTTTGCGATCATATCAATTCTCTCTCCTCTTCTTCATCTTCTTCTTCTTCCTCCGTGAGTGATGGTGGTAACGGTGGTGGTGTGAGAGCGGTGGCGGTTGAGCTTGATGTTACTGCCGACGGAAAGTCGATTGATGCGTCGGTTCATAAGGCTTGGGAGGCTTTTGGTTGTATTAATGCTCTTATTAACAACGCCGGCATTCGCGGTAATGTGAAAACTTCATTAGATGTGTCTGAGGAAGAATGGGATAACACCTTCAAAACTAATTTGACGGGAGCCTGGTTAGTTTCGAAGTCCGTATGTATTCGCATGCGTGATGCAAAGATAGGAGGGTCAATTATCAATATATCTTCAATTGCCGGTCTCAACAGAGGCCATTTACCTGGCTCCGCCGCCTACTCTGCATCAAAGACAGGCCTAAATACATTGACCAAGATGATGGCCCTGGAATTGGGTATGTATAAGATTCGAATTAACTCAATATCACCTGGACTATTCAAATCAGAGATCACTGAGAATCTTATGGAAAAGGACTGGCTTAACAAGGTTTCCATGAAAACCGTTCCTCTGCAGACATTTGGCACATCTGATCCAGCCTTAACATCTCTTGTCCGATACTTGATCTATGACTCCTCAGAGTACGTAACAGGCAATATGTTCATCGTAGATGCTGGTGCCACTCTACCTGGTGTCCCTATTTTTTCTTCCCTCTAG ATGGCGGAAATTGAGAACAAACCCCAAAACTCAATCTCTCAGCAATGGCGGAAAAATCCAGAGTTGGAAGGCAAAGTAGTGATGGTTACTGGAGCATCATCAGGTCTCGGGAGAGAATTCTGCCTTGATCTCGCCAAATCTGGTTGCAAAATCATTGCCGCTGCTCGCCGCATTGATCGCCTCCAATCTCTTTGCGATCATATCAATTCTCTCTCCTCTTCTTCATCTTCTTCTTCTTCCTCCGTGAGTGATGGTGGTAACGGTGGTGGTGTGAGAGCGGTGGCGGTTGAGCTTGATGTTACTGCCGACGGAAAGTCGATTGATGCGTCGGTTCATAAGGCTTGGGAGGCTTTTGGTTGTATTAATGCTCTTATTAACAACGCCGGCATTCGCGGTAATGTGAAAACTTCATTAGATGTGTCTGAGGAAGAATGGGATAACACCTTCAAAACTAATTTGACGGGAGCCTGGTTAGTTTCGAAGTCCGTATGTATTCGCATGCGTGATGCAAAGATAGGAGGGTCAATTATCAATATATCTTCAATTGCCGGTCTCAACAGAGGCCATTTACCTGGCTCCGCCGCCTACTCTGCATCAAAGACAGGCCTAAATACATTGACCAAGATGATGGCCCTGGAATTGGGTATGTATAAGATTCGAATTAACTCAATATCACCTGGACTATTCAAATCAGAGATCACTGAGAATCTTATGGAAAAGGACTGGCTTAACAAGGTTTCCATGAAAACCGTTCCTCTGCAGACATTTGGCACATCTGATCCAGCCTTAACATCTCTTGTCCGATACTTGATCTATGACTCCTCAGAGTACGTAACAGGCAATATGTTCATCGTAGATGCTGGTGCCACTCTACCTGGTGTCCCTATTTTTTCTTCCCTCTAG MAEIENKPQNSISQQWRKNPELEGKVVMVTGASSGLGREFCLDLAKSGCKIIAAARRIDRLQSLCDHINSLSSSSSSSSSSVSDGGNGGGVRAVAVELDVTADGKSIDASVHKAWEAFGCINALINNAGIRGNVKTSLDVSEEEWDNTFKTNLTGAWLVSKSVCIRMRDAKIGGSIINISSIAGLNRGHLPGSAAYSASKTGLNTLTKMMALELGMYKIRINSISPGLFKSEITENLMEKDWLNKVSMKTVPLQTFGTSDPALTSLVRYLIYDSSEYVTGNMFIVDAGATLPGVPIFSSL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo23469.1 vs. NCBI nr
Match: gi|902233252|gb|KNA22969.1| (hypothetical protein SOVF_029040 [Spinacia oleracea]) HSP 1 Score: 579.7 bits (1493), Expect = 2.900e-162 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Spo23469.1 vs. NCBI nr
Match: gi|731324574|ref|XP_010673042.1| (PREDICTED: L-xylulose reductase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 507.3 bits (1305), Expect = 1.800e-140 Identity = 266/301 (88.37%), Postives = 286/301 (95.02%), Query Frame = 1
BLAST of Spo23469.1 vs. NCBI nr
Match: gi|694391704|ref|XP_009371362.1| (PREDICTED: 3-oxoacyl-[acyl-carrier-protein]) HSP 1 Score: 421.8 bits (1083), Expect = 1.000e-114 Identity = 213/287 (74.22%), Postives = 255/287 (88.85%), Query Frame = 1
BLAST of Spo23469.1 vs. NCBI nr
Match: gi|658010644|ref|XP_008340560.1| (PREDICTED: 3-oxoacyl-[acyl-carrier-protein]) HSP 1 Score: 417.9 bits (1073), Expect = 1.500e-113 Identity = 211/287 (73.52%), Postives = 254/287 (88.50%), Query Frame = 1
BLAST of Spo23469.1 vs. NCBI nr
Match: gi|595806100|ref|XP_007202394.1| (hypothetical protein PRUPE_ppa009414mg [Prunus persica]) HSP 1 Score: 412.1 bits (1058), Expect = 8.100e-112 Identity = 208/287 (72.47%), Postives = 251/287 (87.46%), Query Frame = 1
BLAST of Spo23469.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVM7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_029040 PE=3 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 2.000e-162 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Spo23469.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CNU9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063080 PE=3 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 1.300e-140 Identity = 266/301 (88.37%), Postives = 286/301 (95.02%), Query Frame = 1
BLAST of Spo23469.1 vs. UniProtKB/TrEMBL
Match: M5W2W1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009414mg PE=3 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 5.600e-112 Identity = 208/287 (72.47%), Postives = 251/287 (87.46%), Query Frame = 1
BLAST of Spo23469.1 vs. UniProtKB/TrEMBL
Match: B9RU96_RICCO (2,4-dienoyl-CoA reductase, putative OS=Ricinus communis GN=RCOM_1636080 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 3.400e-109 Identity = 203/292 (69.52%), Postives = 244/292 (83.56%), Query Frame = 1
BLAST of Spo23469.1 vs. UniProtKB/TrEMBL
Match: V7BKB7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G242900g PE=3 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 5.800e-109 Identity = 204/287 (71.08%), Postives = 248/287 (86.41%), Query Frame = 1
BLAST of Spo23469.1 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 6.100e-27 Identity = 90/272 (33.09%), Postives = 144/272 (52.94%), Query Frame = 1
BLAST of Spo23469.1 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fabG PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 8.000e-27 Identity = 87/270 (32.22%), Postives = 135/270 (50.00%), Query Frame = 1
BLAST of Spo23469.1 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase UcpA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ucpA PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.800e-24 Identity = 91/279 (32.62%), Postives = 139/279 (49.82%), Query Frame = 1
BLAST of Spo23469.1 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase UcpA OS=Salmonella typhi GN=ucpA PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.800e-24 Identity = 91/279 (32.62%), Postives = 139/279 (49.82%), Query Frame = 1
BLAST of Spo23469.1 vs. ExPASy Swiss-Prot
Match: Y769_MYCTO (Uncharacterized oxidoreductase MT0793 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0793 PE=3 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.800e-24 Identity = 88/268 (32.84%), Postives = 137/268 (51.12%), Query Frame = 1
BLAST of Spo23469.1 vs. TAIR (Arabidopsis)
Match: AT3G55290.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 362.1 bits (928), Expect = 3.400e-100 Identity = 183/280 (65.36%), Postives = 229/280 (81.79%), Query Frame = 1
BLAST of Spo23469.1 vs. TAIR (Arabidopsis)
Match: AT3G46170.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 357.5 bits (916), Expect = 8.300e-99 Identity = 181/280 (64.64%), Postives = 226/280 (80.71%), Query Frame = 1
BLAST of Spo23469.1 vs. TAIR (Arabidopsis)
Match: AT1G62610.4 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 355.5 bits (911), Expect = 3.200e-98 Identity = 180/297 (60.61%), Postives = 229/297 (77.10%), Query Frame = 1
BLAST of Spo23469.1 vs. TAIR (Arabidopsis)
Match: AT1G63380.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 354.4 bits (908), Expect = 7.000e-98 Identity = 177/280 (63.21%), Postives = 224/280 (80.00%), Query Frame = 1
BLAST of Spo23469.1 vs. TAIR (Arabidopsis)
Match: AT3G55310.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 353.6 bits (906), Expect = 1.200e-97 Identity = 178/280 (63.57%), Postives = 226/280 (80.71%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23469.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo23469.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo23469.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo23469.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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