Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAACCTCTCTAAGCCCACAGCCCCAACACGAGGCACGGCCTACTGCCCTCGGTCATCCGGAGCCTTGTAGGCGTTGTAGCCACTTTGTAGCCAAGCCTTGGTTTGGATATACTTGCGGTGTACTTCATTTGCAGTGCCTGGTCTATCAGTGTATCACTAGAACTGCAAAAATGGCGGCATGGTCTCTGCGTCTGCCATTGACAACTCCGTGGAGAACTGGTAATAATTATGGCAGACTCAAACCCTTTTCATATCCATGGAATATTTCTATCTATAAGCATAAAACCCAATTGAATATAAAGCTACTTGCCCATTACTCCACTACTTCATCATCACCTTCAATTTCTGATTCTACTCAAACTCATGAACCCCAAATTCAACCCCAGATTCATGAATCAGTCGCTTCTCCTTCGAAATGGGAATCTTTCCGAAAGAAGAAAGTTGTCATGCGCGTTGGTTATGTTGGTTCCAACTACAAAGGTCATCTCACCCTTCTCTCTCATATTCCCTTTCAAATGTTCGTAATTAATCGGTATAATTTATAAACAAAAATTCAAATTTGTCTTTGTTTTGTGTTTTATTAGGCTTGCAGAAACAACAAGAGGATAACATTCCCAGTAAGTTTATTTCCTTTATCTTAATTTTGTTTTTGTTCTGCATATTCTTGTTCATTGTGTTTTGATTGAATGTTGATCGAATTTCTATAGAATTTATCAGTCTTAATGCATTTGATTCAAGGGATTGAGATTTAAAACCATAACAATGTGATCCAGAGAAGTGTTTAACTGTTTATAGAGTTGTTTGTTACCTGTTGTTAGTTTGTTACTAGTTGCAAAATTGCTGGGATGTTGGATTTTGGGTGTCATTTCGACCCCTCAGTCACTACGAGTCTACAACCGCCCCGCGATCAGTGGAATGTGTATCTTTGTTAATTACAGATTTACAGTACAACTGCTGGAGACGTTGAACTGTCAATTTTAGCTTCCTAAACTGCTGCACTTTCTTAATTGTAGCCATTGAAGAAGCTTTGGAGAATGCCCTTTACCAAGCCGGTGCCATCAACGACACCAATTTTGGTAACTTGAACAAAATTGCCTGGGCAAGAAGTAGCCGAACCGATAAAGGAGTAAGCTTGAAACATTTCACCTTCAGTCACTCCTCCTTTCTAAACAATGCAATGGGTTAAAAATTGTGGAGTTGTTTTTGTTGGTTGTTTTCTAGGTTCATTCACTTGCCACGATGATATCTTTGAAAATGGAAATTCCTGATTATGCGTGGATGAATGACCCTAATGGTCTCGTTCTTGCAGACCACGTTAACCAGCATCTCCCTAATGATATAAGAGTGTTTAGTATTTTACCTTCTCAAAGGTAATGTGCTCACTCTTCTTGCATTTAGCAGCAAATCTTTGACTCAATCACTCTATATCCTTTTACACAAATTTTCTCATGTGTATAAATTCTGTGCATCTCATTTAACAATTTGATTCTCACCTTCAATGCAATCAAGACTGCAATGAATAAGTGCAAATTCCTAATTGAACACTATCTACGGGGCATCAGCAATTCAATAGATTTTTCTCCTTATCGTTTCGAATATGTAGTCATTCTTGAAGCTTATTCCTCTGTAGACTTGTAGTGTATATGGAGGGAGGTGGGAGTGATGGGAAAGTTATGAATCCATTTCCCCTTTGTTTGGATATTTGAATGGGAAAGGGAATATGAAGGAACTATTTTCCTTCGCCTTTCAATGAACCATTTGGAAGAAAAATGAAAGGGTACTAGGTACTCCTTCCCACCCTTCCTCTTCCCTCTCCTTCTCAATTCCCCTTCTATCCCATGATTTTGGAAAACTTTGCAGTGGATGCATTGATGCTTGATTTCCAATGAAGTAAAGTATATGCCTATTCATGAACTTTCCCCCCCCTATGTTTGTGTACATATTAAAGTGTGTTAGGAAACTGCATATGCATATCAAACTAAACAACATAAACATCTGTCTCAATACTTCCTAATCTCATTTCGTTAGGAGTTTTGATCCTCGACGGGAATGTCATGTCCGGAATTATGCATACCTTCTTCCGGCTGAAGTTATTGGAATAACAAGTCACTCCTCCACTGCTGAAATTGATTATCATATAAAAGACTTCAATGAGATTCTAAATAATTTCGAGGTATCTCTCTTTGTATCATTTCTACTTATCATCTGCGACAGTCAGTTTCTTCATTTGATTTTTTTGGCTCATACTGGATCCAGACAAGGTTAAATAATGAATAAACCACATCTACACTGTAATGAGTTATCATGTAAAATAAGACAGGGAATCGGGGATGTTCTTCCATGTTATATGATTTTCTTTTTGTTTATAGTGGTTCTGTTAACTCTGTAATAGTTGAAAACATGAAATTCTTCATTATAGAATATCTATAATGGACAAATTTAAAGTCATGTATACTTGCTTATTTTCATTATGCATGCTACTCTCTGTTTGTTAGAAACGGCTTCATTTTTAACGGGACTATAAATGCTTTTGGTTGCTTACAGTAAAATTACTGGTTTTCTTGGCTGATATACACAAGTTTCGTTACTTAACTGTTTCTAGATGCCTTTTGCAGGGAGAATATCCTTATCATAATTATACAGCCAGATCAAAATATCGAAGAAGGCCGCTAAAAGGACGTGCAAATAGAAGACACAAAAAATCTAATAAGCTGCCACTTGCAGAGGTAGAGGAAAATAATGACGATTTTCAGTCCTCGGTTGATGATGCAGATGCATTATGTGATGAAGAACTGATCACTGATTTGCCAGACGACAGTGATCTTGATGAGGTGTTTGATTCTGAAGATAGCCATGGTGATGAGTCAGAAAAGAAAAATTCTTCTGTTATTAAAGCTAGATGGCTTCACGAGCGTGATGATGCGGACAAGCTCAGTGCTGCTCACTGGAGAAAGATATTTCAGTGTTCTTGTGGCAAGTTGGATCAGTCACTTGAAATGGGTTTTGTGGAGCTCTCGATATGTGGAGAGTCTTTCATGTTGCATCAAGTAAGCCTCCGTTAATTGCCTTTATTTCTGTTAAGCAGAGGTTTTTTTGGGTAAGTTAACCAGATGTTTTCATTATCCTACATTCCTACGTATATCTTTTATTTGTAGTCTGTAGTCTGTACCAGGTTGCAAATATAAGATATTATATTGTTAGAAACTTGGAAATATATTGTAGGTTATAGAGTTCATTGATCTTTTGGTCTAGGTGACAAAGTGTGATTTATCCCCATTAGTCAACATCTTATAAGCAATGGATGGTAGGATGTATAAATCGGATTTGTTTTCAGAACATATTTCAGCTGTTGAGATTTGAGATAAGGTAGGATGATGCGGTGAGCTGGTGAGTAGGTAGATTGCTGCTGGATTTCTTGTGTATCTTAGGTATAATATAAGTGGTTATGGTTACAAGTATAGAATTAAATATGAAGAGGAGTTGCTGATATTGAGTGGACCAACTGCAATGGTCTGGGATGGCGGCGGTGGTGGTGTTATGATGGGAACTACATGTGAAGCCATCTTAACAACCATAACTCACTGCTCTTTCTTCAAGTCCGCTAAAATTGCCGGAATTTCTCCTAATAACTTCCGTACTATCAAGACTACAAAGACTCATGCTTTTTCACTAAGGGGAGATTCACTAAGAGCCACCATTGAAGCCGATGTCAACGCCGGCTTTATTCCTCTTTTCCTTGTCGCCACCGTGGGGGCCACTTCCACTGCGGCCGTAGACGAGGTGGGCCCGCTTTGCGATGTTGCAAAGGAATACAATATGTGGGTTCATGTAGATGCAGCCTATGCTGGAAACGCTTGTAGTCTGGGATGTAGGGAACAGAAGATGCACCAGTAAGGAATATGGAGGTTGGGATCATGGGGATCTTAGAAGAAGCCGAGGGAGACCGAAGATGACTTGGATGGAAGGAGTTAAGAATGAAACGAAGAAGTTTTCTTTTTGCAGGAATGTAGAAAGGAATGGAGGAACAGGATCATGGACCTCATGGTTGACGAGCATAGGAGATAAAACCTTGGTTCATGTTGCCGACACCATCACTGGGATTAAGGCTTCGATATTGTTGTCGTTATTATGGTTATGGATCGACTTGATTGTTGGGGGCTTATTCTACTTCATTGAGATTGCAGGTTCAAGGAAAGGCACAACATCATGCAAGTTTGTCCGCAACTTTAACTCATTGATTGGTTTTGACTTGGTGGGTGGTTGGCCTATGTCCAGTTTTAGCAATACAGTATAGTTTTCTAGCACATTCCTTTTGGATCGTAATTTAGGTGTCAATAGATACTTGCTCCATGTGATTTAGCTGTTATACATTTACATGTAATTCCACTATGCCACTTCTAAGAGAAATCTCATACGTGTTTGAAATGTAGGACCAACGTGATGCATTTAAATAGACAATTTTGTGTACTCTGTTTGTTGTCTATTTTTCCTTGGATAAGTTCTACTCATGAGTAGTTTAAACAGACTTGAGATTTGGCAATATACTAGCACTTCCGCTTTATTTCTCAACCTTTTTCTCTCTTTTATACCGGATATTTTACTGGTTGGAGGGAGGATATATATGTTTCTTCCAGCTTCTTTGATAATTCTGTCTAACATACTTTCTCTGTAAGTGGCGTCATTGGTATAAATTCTTGGCTGGGTTGCTTTGTTATTTTTCCAAATTTGATTTCATTTTAAGTTATTTCAATCACTATAACCCCTAAGCTCGTAATTGTTGTAAATTGGACAGATCCGCAAAATGGTTGGCACCGCTATAGCTGTTAAACGTGGATTGTTTCCCAGAGATATTCTAATGTTGTCACTCAACAAATTCTCGAGAATTGTCCTACCTATTGCTCCATCAGAAGGTTTATTTTTAAGAGGAAATGACTTTAGATTGAGGAAACTTCCTGGAAATAAAAAAAGGCCAGAGATGCAGACCTTAGCTGATTCTGAAGAAATTAAAAAGGAAGTAGATAAGTTCTATGTAACTGTACTGGTACCTCAGGTTTCTAAGTTTTTGGACCCTCATAAGTCTCCCTGGAAGGAATGGATTGAGATTCTGGATGCTAATGCGAGCATACTAGAATCGGAGTTGGATGAAGTCAGAAATGCCTGGAATGCGTGGAATGAAGAATTTCCAAATAGGATTATTTCTAGAAGGGTAAGGTTTTCATTTTATTTATTCAAATTCATTGCTATTTCTCAACTGTCAAATTTACAGTCTTATAAAAGTTTTAAAAGTTAATATTAGCAATGATGTATAACTGTAAGTACTTTGACAAATTAATGATCACAGTTGGTAAGATTTGATCTAAAAAGTCAATTATAGCTCATTATTTTTATATAGCTGGGGATGTTATATTGTAGTGGACATCCCTCTGAGCAATAGCAGATATTTAGCTGAGTCTGAATATTCCATGTACTCATCAGTATGACATTTTGATATATATGCTTACCTGCAGAAACCTGGAGCATTAGATGAATGATATGAGATGAATATATAACAATTCAAAATTTGACAAGTGATGGTGCTAGCCTATCTGGAGCATTGTTAAGCATAAGCATCTTCCTGCAACCTGCAGGTGAATTCACTGATTTTCGTTCTCTTTCCTAGTATGTCTGTTGCTTAGCATTAAACATTTTCTTCTGCTACTGGGTTATGCAAAATGGTACATGGCTTATAATCAATTTGTTGTAACTGAAGATTGAGCTTTTTTTTTTCCCCTCTTGTCTATATTAATTTTGATGAATTTTTTATTATCACCGTAAATATAACTTGTCAGCTCAGTGTTCTCTTGCATTCATTTAAACACCATTTCGAACATAATGGAGTCTCTACTTGGTATTGGTCTTACAGACTTATGTTGTATTTTTGGTTTCGTTGTCATCTAAATTAATTTTGCTTGTTCTCTGTGCTACCATGTAGAGTGAATTTGTTGTTTGACAGTTGCAATTGTGCATATATTATGCTTTGTTTTAGGTTCTTTGGATTAAAAATTCAAAATACCTAGGGCTCAATATACCTAATGCACTTTTTGTGATTGCCCAATCTACATTAGCATGCTCCTGAAAGGAATTATGAGAAACCCAGTCGACTTCTGTATTTGGTTTTTTGGTTGTCAACTACACAGACTAAGATCCTCAAATACATAGCAGTAAGACTGTGTTCCTTTCACGTTATTTCCACTTGTTTCAGGAAAAATAATCCCATTTAAGTTCTTATAATATAAGTTCAAGAAAAATAAGGGCTGGTCAAGTAAAATTTATAACTAAATTAAGTTTTGATAAGTTTTAATAAGTTCAGATAAGTTCAGATAAGATAAGTTCAGATAAGATAAATTCAGAAAAAATAAGTTCAGAAAAAATAAGTGAAAATTAGATGAATAGAACACACCCTAAGTTTCCTGACTGAAATTGCTAGATTTTGCGTTTCTCAAGCAGTCATGCTAATGTAAAGCCTGTATACCGAGGATAAGTAATGACCAACTTCTTGTTCATAGGGTCAGAAGATCTACTGTATCTTCACATTTTGTATTCTATAAGGCGCCTGCTATATGGCATTATACTTGGAGCATCCTACTAACCTTGATTTTCAAGGGCTTTGCTATTAAGTAATTAGATTTTTGTTAAAGGGGTCACCCTTCATTTGGTGAAAACTTGAATTATGGCCAGTTCTCTCGACTCAAATACAAACATTGTTCTAACTTCTAAGAACAACTAAACATCCTTTAGTTCGTAACTAGAGATGTCCGACCTGATCATTTCTGTTTCTACTCGTAGCAATGGCTTGAATGTTCTGTATACCTACGTGTTACTCAAAACTCTCTGCTTCCCAAAATAAATTCTTGGAGGGCTTCCATGAAGATATATCTTCTATAGCTGAAGGTACAAACTTTTAAGACAAACACTGTTGAGATCTCACAATTTATAGCAAATCTTCTTCCCTAGCTTTTGACAAGATCTAAATATAGAAGCATATATAAAACCTCCTGCAAAAGAACATTATTATCCTTTACTCTTTAAGACTCTACATCTAACATCTCCACGACTCCGGTGTTCCCTTCACCTGCATTTCACTTATTGGCTATTAACTTATCTTATCTTATTAACCTTATATTATACTATTTGAACTTATTAGCTATTATCTTATTCTATATTATTGACCATTATTGGAGTTTTGAAATGTAACTATTGTACTTATCATATATTATTTTATCGTATGGGCCCTAAACTATCAAATACGAAGTATTATCTTATTGACCCTTATTTTACCTTATCTTATACTTCCTCCGATTCTTTATTGTTGCAACATACCCCTCTACACGGTATTTAAGAAATGGGCCACAACCACTTTAGTCACATTACTTACTTAATCTTATGTGTAAAGTTGTAACTTTGGGTAAAAAATGTTAGGGAAAATTACTTTTAATAATCCAACATTTAAGCGATTTTCCAAAATTAATCCAACCTTTTGATTATTATCTATTAATCTAACCTTTATACCCCTTTAACTTTTATTGCTCCTTACAGGTTTAGCCGGTAATAATTGATGACGTGGCATGTAATTGTTAAAAAAGTTCGGATGGGTCCCATTTCTCAGGTGAATCTTTAAAAAAATCCCTTATTCCTATTTCTTTTCTTTCTCTGGTCTTTTTCACCCCTTCTTCATCATCTTCCTTCACCCCCACTTCATCATCTTCCTTCACCATTCTCTAGTGAAGACTTAGCTTTAATAATTTTTTTTTCTTTTTTTTGGAAACTCAACGTACCTCCCAACCGAAATCCACCACCTGTTTCTCTCCTCCCCCAGCAGACCCCCTTAATTATCTCCTCCCCTCAGCCAACCACCATTTTATAAAAGGCTAATTTGCATCTGAAAATTGCATGATTTGATGGTGTTGCAGATAAAAAGAAGGCTCAGTTTTTGTTTGATTAACCTTAATTTTATTTTCCCCCTTTTTATTTAAAATTGGAGTAGTTATGAAATAGAAGACCATTAGTAGAACACACATGAGCGACAATGGTGTATAGTGTTTGCTAAATAGGTGGTTTAACCTAAAGTTAGTGATCTATTTCTTGATAGAAAATTCGCAAAAATACAAGGCAATTGAAGGCAGGGATCTTTAACTTACAAAGATAAAAAAGATTGAACTTCTTTTTAATAAGAGGGGCAGTTTTAGTGAAGGGTGGTGGTTGTGTTGTTAGTGTTTTAGCGTGGAGGGTGGTAGGAGGGTTTGGTCTTATTGGTGACGAACTGATGATGATGATGGTGGGTTGGAGGAAGGAAGGCTATGGACTATGGAGTCAGAAGAACTAGATGAAGGAGGAAGAAGACGCATTAAGGGAAAGAAAAAGTGACCTTTCTAGCCGGTTTCAAGTCACTTGGGTTCAATAAAAGTTAATGGGGTATAAAGGTTGGATTATTAGATAATAATTCAAAGGTTGGAGTATTAACGGAAAATCGTCG AAAAAAAAAAAAACCTCTCTAAGCCCACAGCCCCAACACGAGGCACGGCCTACTGCCCTCGGTCATCCGGAGCCTTGTAGGCGTTGTAGCCACTTTGTAGCCAAGCCTTGGTTTGGATATACTTGCGGTGTACTTCATTTGCAGTGCCTGGTCTATCAGTGTATCACTAGAACTGCAAAAATGGCGGCATGGTCTCTGCGTCTGCCATTGACAACTCCGTGGAGAACTGGTAATAATTATGGCAGACTCAAACCCTTTTCATATCCATGGAATATTTCTATCTATAAGCATAAAACCCAATTGAATATAAAGCTACTTGCCCATTACTCCACTACTTCATCATCACCTTCAATTTCTGATTCTACTCAAACTCATGAACCCCAAATTCAACCCCAGATTCATGAATCAGTCGCTTCTCCTTCGAAATGGGAATCTTTCCGAAAGAAGAAAGTTGTCATGCGCGTTGGTTATGTTGGTTCCAACTACAAAGGCTTGCAGAAACAACAAGAGGATAACATTCCCACCATTGAAGAAGCTTTGGAGAATGCCCTTTACCAAGCCGGTGCCATCAACGACACCAATTTTGGTAACTTGAACAAAATTGCCTGGGCAAGAAGTAGCCGAACCGATAAAGGAGTTCATTCACTTGCCACGATGATATCTTTGAAAATGGAAATTCCTGATTATGCGTGGATGAATGACCCTAATGGTCTCGTTCTTGCAGACCACGTTAACCAGCATCTCCCTAATGATATAAGAGTGTTTAGTATTTTACCTTCTCAAAGGAGTTTTGATCCTCGACGGGAATGTCATGTCCGGAATTATGCATACCTTCTTCCGGCTGAAGTTATTGGAATAACAAGTCACTCCTCCACTGCTGAAATTGATTATCATATAAAAGACTTCAATGAGATTCTAAATAATTTCGAGGGAGAATATCCTTATCATAATTATACAGCCAGATCAAAATATCGAAGAAGGCCGCTAAAAGGACGTGCAAATAGAAGACACAAAAAATCTAATAAGCTGCCACTTGCAGAGGTAGAGGAAAATAATGACGATTTTCAGTCCTCGGTTGATGATGCAGATGCATTATGTGATGAAGAACTGATCACTGATTTGCCAGACGACAGTGATCTTGATGAGGTGTTTGATTCTGAAGATAGCCATGGTGATGAGTCAGAAAAGAAAAATTCTTCTGTTATTAAAGCTAGATGGCTTCACGAGCGTGATGATGCGGACAAGCTCAGTGCTGCTCACTGGAGAAAGATATTTCAGTGTTCTTGTGGCAAGTTGGATCAGTCACTTGAAATGGGTTTTGTGGAGCTCTCGATATGTGGAGAGTCTTTCATGTTGCATCAAATCCGCAAAATGGTTGGCACCGCTATAGCTGTTAAACGTGGATTGTTTCCCAGAGATATTCTAATGTTGTCACTCAACAAATTCTCGAGAATTGTCCTACCTATTGCTCCATCAGAAGGTTTATTTTTAAGAGGAAATGACTTTAGATTGAGGAAACTTCCTGGAAATAAAAAAAGGCCAGAGATGCAGACCTTAGCTGATTCTGAAGAAATTAAAAAGGAAGTAGATAAGTTCTATGTAACTGTACTGGTACCTCAGGTTTCTAAGTTTTTGGACCCTCATAAGTCTCCCTGGAAGGAATGGATTGAGATTCTGGATGCTAATGCGAGCATACTAGAATCGGAGTTGGATGAAGTCAGAAATGCCTGGAATGCGTGGAATGAAGAATTTCCAAATAGGATTATTTCTAGAAGGAAACCTGGAGCATTAGATGAATGATATGAGATGAATATATAACAATTCAAAATTTGACAAGTGATGGTGCTAGCCTATCTGGAGCATTGTTAAGCATAAGCATCTTCCTGCAACCTGCAGGTTTAGCCGGTAATAATTGATGACGTGGCATGTAATTGTTAAAAAAGTTCGGATGGGTCCCATTTCTCAGGTGAATCTTTAAAAAAATCCCTTATTCCTATTTCTTTTCTTTCTCTGGTCTTTTTCACCCCTTCTTCATCATCTTCCTTCACCCCCACTTCATCATCTTCCTTCACCATTCTCTAGTGAAGACTTAGCTTTAATAATTTTTTTTTCTTTTTTTTGGAAACTCAACGTACCTCCCAACCGAAATCCACCACCTGTTTCTCTCCTCCCCCAGCAGACCCCCTTAATTATCTCCTCCCCTCAGCCAACCACCATTTTATAAAAGGCTAATTTGCATCTGAAAATTGCATGATTTGATGGTGTTGCAGATAAAAAGAAGGCTCAGTTTTTGTTTGATTAACCTTAATTTTATTTTCCCCCTTTTTATTTAAAATTGGAGTAGTTATGAAATAGAAGACCATTAGTAGAACACACATGAGCGACAATGGTGTATAGTGTTTGCTAAATAGGTGGTTTAACCTAAAGTTAGTGATCTATTTCTTGATAGAAAATTCGCAAAAATACAAGGCAATTGAAGGCAGGGATCTTTAACTTACAAAGATAAAAAAGATTGAACTTCTTTTTAATAAGAGGGGCAGTTTTAGTGAAGGGTGGTGGTTGTGTTGTTAGTGTTTTAGCGTGGAGGGTGGTAGGAGGGTTTGGTCTTATTGGTGACGAACTGATGATGATGATGGTGGGTTGGAGGAAGGAAGGCTATGGACTATGGAGTCAGAAGAACTAGATGAAGGAGGAAGAAGACGCATTAAGGGAAAGAAAAAGTGACCTTTCTAGCCGGTTTCAAGTCACTTGGGTTCAATAAAAGTTAATGGGGTATAAAGGTTGGATTATTAGATAATAATTCAAAGGTTGGAGTATTAACGGAAAATCGTCG ATGGCGGCATGGTCTCTGCGTCTGCCATTGACAACTCCGTGGAGAACTGGTAATAATTATGGCAGACTCAAACCCTTTTCATATCCATGGAATATTTCTATCTATAAGCATAAAACCCAATTGAATATAAAGCTACTTGCCCATTACTCCACTACTTCATCATCACCTTCAATTTCTGATTCTACTCAAACTCATGAACCCCAAATTCAACCCCAGATTCATGAATCAGTCGCTTCTCCTTCGAAATGGGAATCTTTCCGAAAGAAGAAAGTTGTCATGCGCGTTGGTTATGTTGGTTCCAACTACAAAGGCTTGCAGAAACAACAAGAGGATAACATTCCCACCATTGAAGAAGCTTTGGAGAATGCCCTTTACCAAGCCGGTGCCATCAACGACACCAATTTTGGTAACTTGAACAAAATTGCCTGGGCAAGAAGTAGCCGAACCGATAAAGGAGTTCATTCACTTGCCACGATGATATCTTTGAAAATGGAAATTCCTGATTATGCGTGGATGAATGACCCTAATGGTCTCGTTCTTGCAGACCACGTTAACCAGCATCTCCCTAATGATATAAGAGTGTTTAGTATTTTACCTTCTCAAAGGAGTTTTGATCCTCGACGGGAATGTCATGTCCGGAATTATGCATACCTTCTTCCGGCTGAAGTTATTGGAATAACAAGTCACTCCTCCACTGCTGAAATTGATTATCATATAAAAGACTTCAATGAGATTCTAAATAATTTCGAGGGAGAATATCCTTATCATAATTATACAGCCAGATCAAAATATCGAAGAAGGCCGCTAAAAGGACGTGCAAATAGAAGACACAAAAAATCTAATAAGCTGCCACTTGCAGAGGTAGAGGAAAATAATGACGATTTTCAGTCCTCGGTTGATGATGCAGATGCATTATGTGATGAAGAACTGATCACTGATTTGCCAGACGACAGTGATCTTGATGAGGTGTTTGATTCTGAAGATAGCCATGGTGATGAGTCAGAAAAGAAAAATTCTTCTGTTATTAAAGCTAGATGGCTTCACGAGCGTGATGATGCGGACAAGCTCAGTGCTGCTCACTGGAGAAAGATATTTCAGTGTTCTTGTGGCAAGTTGGATCAGTCACTTGAAATGGGTTTTGTGGAGCTCTCGATATGTGGAGAGTCTTTCATGTTGCATCAAATCCGCAAAATGGTTGGCACCGCTATAGCTGTTAAACGTGGATTGTTTCCCAGAGATATTCTAATGTTGTCACTCAACAAATTCTCGAGAATTGTCCTACCTATTGCTCCATCAGAAGGTTTATTTTTAAGAGGAAATGACTTTAGATTGAGGAAACTTCCTGGAAATAAAAAAAGGCCAGAGATGCAGACCTTAGCTGATTCTGAAGAAATTAAAAAGGAAGTAGATAAGTTCTATGTAACTGTACTGGTACCTCAGGTTTCTAAGTTTTTGGACCCTCATAAGTCTCCCTGGAAGGAATGGATTGAGATTCTGGATGCTAATGCGAGCATACTAGAATCGGAGTTGGATGAAGTCAGAAATGCCTGGAATGCGTGGAATGAAGAATTTCCAAATAGGATTATTTCTAGAAGGAAACCTGGAGCATTAGATGAATGA MAAWSLRLPLTTPWRTGNNYGRLKPFSYPWNISIYKHKTQLNIKLLAHYSTTSSSPSISDSTQTHEPQIQPQIHESVASPSKWESFRKKKVVMRVGYVGSNYKGLQKQQEDNIPTIEEALENALYQAGAINDTNFGNLNKIAWARSSRTDKGVHSLATMISLKMEIPDYAWMNDPNGLVLADHVNQHLPNDIRVFSILPSQRSFDPRRECHVRNYAYLLPAEVIGITSHSSTAEIDYHIKDFNEILNNFEGEYPYHNYTARSKYRRRPLKGRANRRHKKSNKLPLAEVEENNDDFQSSVDDADALCDEELITDLPDDSDLDEVFDSEDSHGDESEKKNSSVIKARWLHERDDADKLSAAHWRKIFQCSCGKLDQSLEMGFVELSICGESFMLHQIRKMVGTAIAVKRGLFPRDILMLSLNKFSRIVLPIAPSEGLFLRGNDFRLRKLPGNKKRPEMQTLADSEEIKKEVDKFYVTVLVPQVSKFLDPHKSPWKEWIEILDANASILESELDEVRNAWNAWNEEFPNRIISRRKPGALDE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo23459.1 vs. NCBI nr
Match: gi|902177293|gb|KNA08935.1| (hypothetical protein SOVF_158230 [Spinacia oleracea]) HSP 1 Score: 1085.5 bits (2806), Expect = 0.000e+0 Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 1
BLAST of Spo23459.1 vs. NCBI nr
Match: gi|731349356|ref|XP_010685952.1| (PREDICTED: putative tRNA pseudouridine synthase [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 798.1 bits (2060), Expect = 9.400e-228 Identity = 411/539 (76.25%), Postives = 457/539 (84.79%), Query Frame = 1
BLAST of Spo23459.1 vs. NCBI nr
Match: gi|848852283|ref|XP_012839130.1| (PREDICTED: putative tRNA pseudouridine synthase [Erythranthe guttata]) HSP 1 Score: 535.0 bits (1377), Expect = 1.500e-148 Identity = 275/446 (61.66%), Postives = 345/446 (77.35%), Query Frame = 1
BLAST of Spo23459.1 vs. NCBI nr
Match: gi|823143796|ref|XP_012471711.1| (PREDICTED: putative tRNA pseudouridine synthase [Gossypium raimondii]) HSP 1 Score: 535.0 bits (1377), Expect = 1.500e-148 Identity = 274/455 (60.22%), Postives = 347/455 (76.26%), Query Frame = 1
BLAST of Spo23459.1 vs. NCBI nr
Match: gi|590591522|ref|XP_007017040.1| (Pseudouridine synthase family protein [Theobroma cacao]) HSP 1 Score: 532.3 bits (1370), Expect = 9.600e-148 Identity = 274/457 (59.96%), Postives = 350/457 (76.59%), Query Frame = 1
BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNW4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_158230 PE=4 SV=1) HSP 1 Score: 1085.5 bits (2806), Expect = 0.000e+0 Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 1
BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EQX1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175580 PE=4 SV=1) HSP 1 Score: 798.1 bits (2060), Expect = 6.500e-228 Identity = 411/539 (76.25%), Postives = 457/539 (84.79%), Query Frame = 1
BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QL35_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G151400 PE=4 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 1.000e-148 Identity = 274/455 (60.22%), Postives = 347/455 (76.26%), Query Frame = 1
BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A022S0A4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a004890mg PE=4 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 1.000e-148 Identity = 275/446 (61.66%), Postives = 345/446 (77.35%), Query Frame = 1
BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MNG3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_22524 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 1.900e-147 Identity = 281/517 (54.35%), Postives = 368/517 (71.18%), Query Frame = 1
BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUSH_ARATH (Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana GN=At2g30320 PE=3 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 3.800e-136 Identity = 248/446 (55.61%), Postives = 327/446 (73.32%), Query Frame = 1
BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUS1_KLULA (tRNA pseudouridine synthase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PUS1 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.500e-20 Identity = 115/403 (28.54%), Postives = 187/403 (46.40%), Query Frame = 1
BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUS1_YEAST (tRNA pseudouridine synthase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUS1 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 4.900e-19 Identity = 67/192 (34.90%), Postives = 96/192 (50.00%), Query Frame = 1
BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUS1_CANGA (tRNA pseudouridine synthase 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PUS1 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-18 Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1
BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Match: PUS1_YARLI (tRNA pseudouridine synthase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PUS1 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.900e-18 Identity = 99/365 (27.12%), Postives = 166/365 (45.48%), Query Frame = 1
BLAST of Spo23459.1 vs. TAIR (Arabidopsis)
Match: AT2G30320.1 (Pseudouridine synthase family protein) HSP 1 Score: 486.5 bits (1251), Expect = 2.100e-137 Identity = 248/446 (55.61%), Postives = 327/446 (73.32%), Query Frame = 1
BLAST of Spo23459.1 vs. TAIR (Arabidopsis)
Match: AT1G20370.1 (Pseudouridine synthase family protein) HSP 1 Score: 86.3 bits (212), Expect = 6.400e-17 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 1
BLAST of Spo23459.1 vs. TAIR (Arabidopsis)
Match: AT1G76120.1 (Pseudouridine synthase family protein) HSP 1 Score: 81.6 bits (200), Expect = 1.600e-15 Identity = 53/162 (32.72%), Postives = 80/162 (49.38%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23459.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo23459.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo23459.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo23459.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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