Spo23424 (gene) | SpinachBase

Overview


Name	Spo23424
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Man1-Src1p-carboxy-terminal domain protein
Location	chr6 : 43267413 .. 43276381 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTGTGGGTTTGTGGCTGAGTGGAGGGAAAGGTAAATCCTCTTTCTCTTTTCACAGGTCGATCAAAAAATTGCAGCAAAACATTACCAAACTTCAGCAGCAACAATGTCATCTTCAACACCTAAAAGACGCCCAAAATCATCTCCCATAAACCCTAATTCCAAAATAATCCCAAATCAATCTCAAAATCATAGCTCATCTTCGACGCTAACATCATTACTAGCAGAAGTAGAGCCACCCCCTAATTTACTCCCTTCCAAATCCGACTTTCTCAACCTCATTGCTATCGTCATTATCGCAGCTGTTGTCGCCGTTTTATGCAACTCCATCTCCCGCTTCGTCAATCGCCCTCCTATTCTTTTCTGTGATTCCGACGTCGTAGAATCCGATGTTTCATTGCTTGGTAATGATCACTCTTTGCTCTTGTTTTCCTGTCAATTTAATCGTAATTTATGGTATTTCTGTGTGATAATTGTAATTTGGAATAGTATGTCACTTAATTTAAATCTCTCTCATGATTTTATTGAAAATCCTAGATTATACTATGGTAAACTGTTGTTACTATTTCAATTTTCATTACATTTTTCATTCACAGCTCTCTTTTTCGTCTGTTAAATGCTTATATACAAGAAACCAGCGATTGAACATGGATTTTCCTTGTCTAGGAAAGTTCAAATGCGAGTAATTTTGGAAGATAATAATGCTTGTATTACGTTTCACACTTTCACACAAGAGCTGTTTAAGATGTCCTGACATTCATTTTTTTTTCCGTGAAATGTTGGACACTGGATTATAATGAACTATATAAAATGCTGATGTATGGTTCTTATTTGCCGCGAGGTGGTAGAGTGGTTGTCTATTGGATTAAGGGTCAAATAGGGTGAGTTCATAGAAAAATTTTAAAGAATAAATTGTGTTGGTTAGAATTAGTGTAAATAACAATAGTACTAATAAAAAAGATACTAACCCTAGTAAAAGAGCACTTAATCCTTGTGCAAAAAGCTAAAACGTCGACTGGGAAAAAAAAATCAGACGAAGTACTTGTTTGTGTTTGCTTGAGATGTAGGAAATGAAGATCGGGGGGTGGGTGGTTGCAGTTACAAAGATTTGATTGAGTTATTCTTGCGTTGTTGATCTTGCAGATTCATGTGAGCCTTGCCCTATTAATGGAAGGTGTTACAAGGGCCAGCTGGAATGCATTCAAGGATTTAGGAAGTACGGCAAGTTATGCATTGAAGACGGAGATATCTATGAAGCAGCTAAAAAACTTGTAAGCTGTTGCACTATGGTTTTCTATGCAGTCATGTAATCTTCTTTTTGATTGAACTAATGGAAGTCCTCACCTTGCTATGGCTTAATTTTCTGTAACAACATCTTTCCGTTCTTTCAGTCAGGATGGGCAAAGGATCATTTGTGTGAAGCACATGCACAGTATATGTGTGATGGAACCGGAGCGGTTTGGGTTTGTTACTTCTTTGCTGTCAGGCCTTGATATACTTTTACATGACACCTGAGAGTGCCAGAATTGGTTAATTGTGTTAGTAAATTTTGCCATGAATGTGTTTAGGTCTCTGAGGAGGATTTAATGAACATGCTGGACAAAGATGGGGGGTTTCAAGGTTCAACAGTAGATGTTGATATCAAATACTTGTACTCAAAAGAAAAAGCAATGGAGGACATTAATGGATTTATGGATACAAGAACCATTGGCAACGGGTATGCTTTTTCCCACTGCTAATATTGAATAACTACTTATCCGGTCGCGGGTTAGATCCCTTTACCTTGATCCTGATCACATGTCCCAAAAAGCAGGTCAAATTTTATTCAGATCACTAACCCTATTCATCAAACCTTAAGGCAGACAGTTCATCTCCCTCTGCTCTATCCCCTAAATCTGCCCAGTTGAACCTTTTGATCTAAAGAACTAAAGGTAATTTCCGATATAAGGTTTTGATTGAAAATCCTAGATCTGCAATTAAGTAATTGATGCACAACCATTAAGCCTGGATGCTGCGAGCATCTCACGTCATATAAAGAGTCCGAATCATAGTAGCTTATAGGAAGCATTTTGCGTGCCCGTTCTTATACCCGAGTCACATATTATTTGACAGAGTTCTGTACTTTGGCGAATTCTAAAGTATCTTATGTATCCTTTCTTGCAGGGACAAAGAGGTTAAATGTCCTGACGAATTAGCTGAAAGTTATAAAACAATGACATGTCGTGCTCGACAATGGGTAGCTAAGAATCTTCTACTTCTCATTGCAGTATTTGCACTGGTATCCAACTTGTATCTCAATTCTTAAAATGTTGAAAAGAACTTCAGGTTCATTGTGATGATATTGAAATTTACAGCTCGCAGGATGTACATTGTTGCTGTTGAGAATTCGTAGAAGATGGTATTTGACAAAGAGAGTAGAACATCTTTACCATCAGGTCAGTGCTTGGCACAACCTTCCTCACTGATACAAACGACATAAAATTTAAAAGGGTGCAAGGGTGGGTTATCGGATATCAAATGGGCTCATTTTAGGGGACAGTTAAAATTTGTATAAGTTAACCAAGGGGATGTCATCCGTACGAAACTCTAAGGACATACAAACAAAAAAAACTCAAGTGTCACACAGAGACTAACGCTTGACTCTCCAGCTCAATAGGGTCAAAAAAGGAACTGGTAACCTTGATGTGGTGAAGTTCTAGCCTAAATTCATTTGGTTACTTTCTAACCAAGTGTACCACTTAATTGCCAATAGGTGTATCTTTTGCACTTGGCGTAGTTTTATGCTTTAAAGAACTAGCTTTAAAATTCGAAAAATGTTGATCAGGGAAAGAGCTGACTGCCTTATTGGTTGTAAATTGGATATATAATCGCTAGTTTCATTTGCTGGTCCAACTGTATAAAATGATACTATTGATATTTATGAAGTGGGGAGGCTAATGCTATCTGTAATCTGTTCATTGACTTCATTCTTATGACAATATTTAGCTAATACATCACGTTTTATTATTGAGTATTGACATATTTTAACCCCCGATTTATTTAAGTTTTCTTCATAAAAATGACAGGTTTGTGACACACTTGAGGACAATGCTTTAATGTCTAGAAGCATGGGTGACAGAGAAGCCTGGTTAGTTGCCTCAAGGCTCCGAGATCATATCCTTACTCCCAAAGAAAGAAGAGATCCTCTTCTATGGAAGATGGTAGTTCTCCCTCCTTTCTTTACCCTCCACTTCCGTTGGAGTTCTTGATACATTTTTCAGTTTCCAAACACATGTTCTTGATATTCTTATACTGTACCCTTTGACTTTTCTACCCGTGTGTGTTTCTACTCCTTTCTTTTTCCTTCTGATATGTTATCATGTTCATTTTAAACATGAAACATGTACAATTTACAGTTCTCCATCCTTGCCGTTTGATACACTTTCCCATCATGTATTGATGCTCATTTGATTTCTTTCTTTTAAATAGGTTGAAGGTTTGGTGGAATCGGACTCTCGTTTGGACCGCTATCCAAAGCTTGTGAAGGGTGAATCAAAGGTGGTGTGGGAATGGCAAGGTAGTTAACTTGTCATTAGGGATTTCATTTAGATATCTCCAAGCCTCATTTGCAACATAAGTCTAAATAAATTGATAGTTTATCTGATTAAAAGGGGAATCGGGAGACTGTAACTTATTAGATATCATTAGTAATTTTGTGAGTAACAGACAACTCACCCCATAAAGATAAATACATTTTCAAAGTGTTATACTCCGAACTTATACGTGTCTAGTCTCGTCAACTTACCTCAAAATTCGTTTTTCCACTGGATTAAAGATGTTCCCTTTATATGTTGTTGAAGGGTTCGACAGTTTAAGGAATGCCTCAAAGAGTTGAATAGAATATACAGGCAATAATTCTTACCCCAAAATTAATTATGCATTTTTCCAGAAATGGAGCAAATTGACAGTGAAAGAGTGCGTAGTTGACCTTTCACTTCAGTTAGCGATTGTCTGGTTGTTGTGTACTTGCTAGGGCTGCTGACAGTTGCATGACAACTACTCCGTGCCTCTTACTAGTTCTTACCATACAGTACTTAATTGGCTATTTTGCTGCTTGTTTTGGTTGTTTTGACATATTCTGGTGTCCTTACCTTCCATTTTATCTTCATCATGGTGTTAGACGTGCAACAAAATAGAATTTTATTCAATTTACTTTTTTCTAGTGTAGAATGTCATGTTTGCTCAATCAGATTCCATGATTTTGGCTCCCCGATCAGTAGCTAGAATAAGTGTTGTCCATCCTCACCTCAAATGAATGAAAATGATGATTCTTCTAGTTTCTATGGCGCCTTACTCTGTTTAGTCCTTTTCTTTTTGTCTTTGAAATACTAACCTCTTTTCCTTGTCTTTCTCTCCTCGCTTCTCATTAGTGGAAGGTTCTTTGAGTTCTTCCAGGAGAAAGAAGGCGGAGTTTGGCAATCTGAATTATGGCGCAGATACGATTAATTGAAATTGGTGAGATATAAAAGCCTAACTGTTCGCATATGATCTTTTCGAGATTCAATGTTTTGACAAGTTATTTATTTGATTTTCAGTTGTGGATAAGCAAATGTCTTAGAACAAACACTTCAGTCTTCTACTTGTTTGTTGTGAAGTAGTATGCAGTTGAAACCCTTTGCTGTTGCATGGGGAAGATTAGGAACACCACACACATGATCACCCCAAAGCCCCCTAGAGGTGTGAGTGACACTTGTGCATTATATATAGTTATATACATTGTTTTGACAAATTGATCTTGAATCTGTAATTTGTATAAGTTGGCCCGTTAATTTACGCTTCCCTATGTGTGCAGGCTGTTAGAAGTTGGTATTGGAATATCAATGGTACCAGAAGAGTTGATAGGAAGCTGTTTTACATTAGTAGTGCATAGAGGTGATCAAAATACGGGCCAGGCCGGACTTTAACACAAAAAATAATGCCCAAACCGATATATTTGGAGTGGGCTTTCAGGTCGGGCTCGGGCTTAAATCTAAAAAGGAGTATTTTAATCTACAAAATTGCAGAGATGCACACACCATGAGGCACATGAACTTCCTGAAAGACAGTATCAATTTAGTCAAGGAACGGCCATATTTGTCATTCGTGTAGAAAATTAGATTTCCATATACAAAATTTATTGTAATTATGTAAACTTAATTTCATTACATGAAGAAATCCAACAGGAAGTTTTGTGGTGAGTTCAGATTTGTGCTTTAAGCATCTCATTGACATTCTTGTCTGAAAAGTGCTGATATGTTTGATGCTGATTGGCGGCTTAGATGAAATGTGAATCTTATAAATTAGATTATGTAGTTTCTACGTATCTGTTGATTGTGTTCAGTACTCAGATAATTGGCTCATGGCTTAATTTTTGTGAAAAGGTAAAGTTTTGAGCTCAAGATCTTGACCGAGCTTGTCTAATGGTAGAAAGTTCAGTGCAATTAGGCGAACCAAACTGTAAAACAGGGTTTGAGAATTTTTTCAAACCAAACTGGACCATATAATTCTCCAAACCGAGCCAAACCAAATTGTATTTTGGTGCGGTTTGGTTTGCGGTTTATATTTTATTGACAAATTTTGAAAGTTCAATTTCATTAGAAGAAAGTACGAGAAATAAATGAGAAATTAAAATGCAGTTTGGTTTACGGATTCTTGCTAATTTTTCAAAATTCCAAATGTAGGTATTTTAGTTATTTTTTAAAAATTATGCGATATAAGTTTAAAAATTACATGTAGGATTTGGTTTGGTTTGCGGATTATGGTGTGAAACGTAAACTATTTGGTTTATGGTTTGGTTTAGGTTTTTTTTATTTAGTCAAACCAAACCCAAACCGTAAATTGTATTTAGCTAAAATTATTAACCAAATCGTAAACCAAACATTACCGTGAAAATATAGTTTGGCTTACAGTTTAGTCTGGTTTAAACCAAACTCTGAATTCCGAAAGTAAGAAAAGTTTATGCCTGGAATAGGGTTTTAAAGGTAACATAAAATAATATAGTTCGTAATATGCTATCTCATTAGCTTATTGCAACACATGTTGAGTTTGTACTGAATCGGGGGGCTGGACTAGCTTGGCCTCATTTTGTGTCATTCTATGTCTAGAGCAAATGTAATGTCACGCTCTCACAAGTCACAACGATTCAACGAGTGTGCCAAAATCACTTTCCCTCTACTCTCTATGTGTGTACTTGTACTCTAGTAAATAAGAACTCCTTGAAATTGTTCATCTTACGATTCTTACCTAAAGTTCCCTTAGAATTTAAAAACATAATCCAAAGTATGGCATTATATCTCCAGTTCAATATATTAATGCTATAGTCGTTAATCTCTCTCGTTATTTTTTCCCCTTACTTACGTGACTATAATAACATGTTACACCTATATACATTGAAAGTCATCGAACTCAAGTTCAACTAAAGAAAACTTGTCAAAAGATTTATTCTAATCTTAATCTTATAGAAGTTTATGGAACGTAAAACCGCATACTGACTACATCCCTCGCACCATGTTGTCTTCCATTCTTGTTTCGTACCTTGGTGTTAGAAAATCTTTTTACTTTTCATATAAAATTATAATCGATATAAACCTAATTATATTAGCGCCTACTAACGATCTGGCTCGACCCTGTGTGAAAAAAGCATGACACAACCACAATACAGGCACAACGGGCCGTACATGGTCAATATTAACACAACAGCCCGTACATAGTCAACATTCTTTTAGTGAAAAAACACGATAAAACATGACACGACACGAGAGTCCGGGAAAAAAATTACGAGTATTGGGCAAGTTAGCTGATGGGCTCGAACTCTTGGACAAACGGACCGCAAAAGTATGATTATTTCCAGCTCTTTACTATCTTCTCCATTTCTCACTGTACGTCTTCTTTTTTTCCAGTCTCTCTCTCAGCGAAAGAGCAAAAAAGCCATAGCCAGCAAGTGAACCCAGAGATTACTGGAGCAGAATCTTACCAGTCACCACTCGCTCGCTCCGTCGTCGACGTATTTTCAACTTTACTAACAAAAACTAACCAAGTTAGTTTTAGCTTCTTCTTCTTAATCTGTAAGTACTTTTTTTGTTTTCTTTTTCTTTCAAGTTTTCATGAAGGTTTCTGAAATTTGTTAAAAGTTATCTTTATTTGGTAGGGTTTGAATGTTAGATGTTTTTAGAGCATGGGGTGAATTTTTTTTGTGATTATTAACTTGATTGGTTCAATTGTTGGTCTGATTCGAACTTGTTTAGGAGTGTTGGTCTGATTCGAACTTGTTTAGGAGTTAGGGATTCTGGGGTTCTTCATTGTTATTTGTTTGTCTAAGTTAGTGTTTATTTGATATGATTTTGTGATTGATTGTTAATGTATTGGTCCAATTGTTGAATTTGCTATGCTAATTGAATTATTGGTTGCCATAAATCGTTGCTTTATTGTCCATTTTAATTGTGAGTTGGGTTTGTTCTTAGATTAATGTGGATTGATTATGGTGGAGCTTTTGGAATTTTCATCTTAGAGTTAAATAATTTTAGATATTAGACACCCTTTACCATGACATATTATTAGGGTTTTAGGGGAGAGTTACCATTTTCTTGAAATAAGGGAATGCTGTTACTGGTTGTTCATTGTTGTTGCTTTTGGCTAGTCCCAATTAGGGTGAAACGGAGTTGAGAGCTCAGTTGTGCCTTGTGTCATGTAAATGGTTAGCTTGAGCCCCGCTGAAAGCCACCAAGCCAAGCAATGTGAAGCTGAAGCACCGTGGCTCAGTGTTTTTCTTCAATACTCGGCTCAAAACTCAATTCTTGCTTGAGTTGGCAATTCTCCTTCATAGATGGTTAATTTGGTACTTTTGAAACTTGAAGCTACCGAAATGTGCATTTATAATAGTAATTTTGGTTTCCCTATCATAGAAAAGGAGATAGTGATTAACCAACTATTGTCCAAAGTCCAAGCTTAAACAATATTGAATTAGAGCTAGTAGGTTCAAGCTTTTCGTGGAAACAAACAGAGCCTGGTAGGTTCGGCTCATACTTGGGTCAAACAGAGCTCAAGGGATTGTTGAGAAAACTCAGTTCTCTTTTCACCTAGTCTCAACTGTTATTACTTGGCAACAATTTCACTAGCTGCTCAATATTGGAAATCTAAGTTCTCTGATTTATTGATGTAGAGTGAAGAGCCGTTGATATACAGTTGTATCATGAGTTCATGAGAAGGCTACTAGTAGTGACATTAAACTTTGGTTGAATATTTAATGGACGAAACTTGCCCTTGGAATACCGGATACCACTAACCCAATTTAGCCATAGTCCGTTGGGAGGTAGGGTTACTAAAGTAGAATATTACATTTATTACCCTTGAATTTTATAGAAATCAAGTAGAAGGGGGATTGCTTAATTACCTAGACTTGCCAAACTGATAAAACTTATTCTTCTAATAAATGTTTCTCTGTTCACCAGATAATACTTAATGTTGGTTTCACTGGATAATACTTAATGTTGGTTCTTCTACTTTTCACTTGACAAGATTCAAGATAATTGTGCTTTCTATCTTGATTTTTTCATGTTGATCAAGAACATTACCAGTTTGGCAGTTTCCATTGCCGTTCTTAGCTTCTAACCTGTTTTGATAAAGGGGGTTTGCTAATTCATTGCCATGATATGGGACGTTGTTCATGTATTTATTTTATTGGCCAGCTGCGGTGCTCTTTGTTATTGGCTGGTATAAATGAACCCTTTGGCCTTGACATTGATAATGCATATATATAGGACTTGTACATTTTGCGTATGATCAAACAGGTAGAAAAGGCTGTATTCAGTGCATTTGATTTACTTGACCTACTTGCTACTTTCTTGGCTGTGTATAGAATCAGTAGACATCATCTTCACAGAATCTCTTTGTACGATTTAGCCTGATGTCTACTTCTCCAATCTTATGGAAAACAGGTAGGCAGAAGATTTGA

mRNA sequence

TTATTTGTGGGTTTGTGGCTGAGTGGAGGGAAAGGTAAATCCTCTTTCTCTTTTCACAGGTCGATCAAAAAATTGCAGCAAAACATTACCAAACTTCAGCAGCAACAATGTCATCTTCAACACCTAAAAGACGCCCAAAATCATCTCCCATAAACCCTAATTCCAAAATAATCCCAAATCAATCTCAAAATCATAGCTCATCTTCGACGCTAACATCATTACTAGCAGAAGTAGAGCCACCCCCTAATTTACTCCCTTCCAAATCCGACTTTCTCAACCTCATTGCTATCGTCATTATCGCAGCTGTTGTCGCCGTTTTATGCAACTCCATCTCCCGCTTCGTCAATCGCCCTCCTATTCTTTTCTGTGATTCCGACGTCGTAGAATCCGATGTTTCATTGCTTGATTCATGTGAGCCTTGCCCTATTAATGGAAGGTGTTACAAGGGCCAGCTGGAATGCATTCAAGGATTTAGGAAGTACGGCAAGTTATGCATTGAAGACGGAGATATCTATGAAGCAGCTAAAAAACTTTCAGGATGGGCAAAGGATCATTTGTGTGAAGCACATGCACAGTATATGTGTGATGGAACCGGAGCGGTTTGGGTCTCTGAGGAGGATTTAATGAACATGCTGGACAAAGATGGGGGGTTTCAAGGTTCAACAGTAGATGTTGATATCAAATACTTGTACTCAAAAGAAAAAGCAATGGAGGACATTAATGGATTTATGGATACAAGAACCATTGGCAACGGGGACAAAGAGGTTAAATGTCCTGACGAATTAGCTGAAAGTTATAAAACAATGACATGTCGTGCTCGACAATGGGTAGCTAAGAATCTTCTACTTCTCATTGCAGTATTTGCACTGCTCGCAGGATGTACATTGTTGCTGTTGAGAATTCGTAGAAGATGGTATTTGACAAAGAGAGTAGAACATCTTTACCATCAGGTTTGTGACACACTTGAGGACAATGCTTTAATGTCTAGAAGCATGGGTGACAGAGAAGCCTGGTTAGTTGCCTCAAGGCTCCGAGATCATATCCTTACTCCCAAAGAAAGAAGAGATCCTCTTCTATGGAAGATGGTTGAAGGTTTGGTGGAATCGGACTCTCGTTTGGACCGCTATCCAAAGCTTGTGAAGGGTGAATCAAAGGTGGTGTGGGAATGGCAAGTGGAAGGTTCTTTGAGTTCTTCCAGGAGAAAGAAGGCGGAGCTGTTAGAAGTTGGTATTGGAATATCAATGGTACCAGAAGAGTTGATAGGAAGCTGTTTTACATTAGTAGTGCATAGAGTCTCTCTCTCAGCGAAAGAGCAAAAAAGCCATAGCCAGCAAGTGAACCCAGAGATTACTGGAGCAGAATCTTACCAGTCACCACTCGCTCGCTCCGTCGTCGACGTATTTTCAACTTTACTAACAAAAACTAACCAAGTTAGTTTTAGCTTCTTCTTCTTAATCTGTAGGCAGAAGATTTGA

Coding sequence (CDS)

ATGTCATCTTCAACACCTAAAAGACGCCCAAAATCATCTCCCATAAACCCTAATTCCAAAATAATCCCAAATCAATCTCAAAATCATAGCTCATCTTCGACGCTAACATCATTACTAGCAGAAGTAGAGCCACCCCCTAATTTACTCCCTTCCAAATCCGACTTTCTCAACCTCATTGCTATCGTCATTATCGCAGCTGTTGTCGCCGTTTTATGCAACTCCATCTCCCGCTTCGTCAATCGCCCTCCTATTCTTTTCTGTGATTCCGACGTCGTAGAATCCGATGTTTCATTGCTTGATTCATGTGAGCCTTGCCCTATTAATGGAAGGTGTTACAAGGGCCAGCTGGAATGCATTCAAGGATTTAGGAAGTACGGCAAGTTATGCATTGAAGACGGAGATATCTATGAAGCAGCTAAAAAACTTTCAGGATGGGCAAAGGATCATTTGTGTGAAGCACATGCACAGTATATGTGTGATGGAACCGGAGCGGTTTGGGTCTCTGAGGAGGATTTAATGAACATGCTGGACAAAGATGGGGGGTTTCAAGGTTCAACAGTAGATGTTGATATCAAATACTTGTACTCAAAAGAAAAAGCAATGGAGGACATTAATGGATTTATGGATACAAGAACCATTGGCAACGGGGACAAAGAGGTTAAATGTCCTGACGAATTAGCTGAAAGTTATAAAACAATGACATGTCGTGCTCGACAATGGGTAGCTAAGAATCTTCTACTTCTCATTGCAGTATTTGCACTGCTCGCAGGATGTACATTGTTGCTGTTGAGAATTCGTAGAAGATGGTATTTGACAAAGAGAGTAGAACATCTTTACCATCAGGTTTGTGACACACTTGAGGACAATGCTTTAATGTCTAGAAGCATGGGTGACAGAGAAGCCTGGTTAGTTGCCTCAAGGCTCCGAGATCATATCCTTACTCCCAAAGAAAGAAGAGATCCTCTTCTATGGAAGATGGTTGAAGGTTTGGTGGAATCGGACTCTCGTTTGGACCGCTATCCAAAGCTTGTGAAGGGTGAATCAAAGGTGGTGTGGGAATGGCAAGTGGAAGGTTCTTTGAGTTCTTCCAGGAGAAAGAAGGCGGAGCTGTTAGAAGTTGGTATTGGAATATCAATGGTACCAGAAGAGTTGATAGGAAGCTGTTTTACATTAGTAGTGCATAGAGTCTCTCTCTCAGCGAAAGAGCAAAAAAGCCATAGCCAGCAAGTGAACCCAGAGATTACTGGAGCAGAATCTTACCAGTCACCACTCGCTCGCTCCGTCGTCGACGTATTTTCAACTTTACTAACAAAAACTAACCAAGTTAGTTTTAGCTTCTTCTTCTTAATCTGTAGGCAGAAGATTTGA

Protein sequence

MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIAIVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQGFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDGGFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQWVAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDREAWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSLSSSRRKKAELLEVGIGISMVPEELIGSCFTLVVHRVSLSAKEQKSHSQQVNPEITGAESYQSPLARSVVDVFSTLLTKTNQVSFSFFFLICRQKI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo23424.1	Spo23424.1	mRNA

Homology

[Close]

BLAST of Spo23424.1 vs. NCBI nr
Match: gi|902179603|gb|KNA09383.1| (hypothetical protein SOVF_154050 [Spinacia oleracea])

HSP 1 Score: 743.8 bits (1919), Expect = 1.800e-211
Identity = 370/380 (97.37%), Postives = 372/380 (97.89%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA
Sbjct: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQ 120
           IVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQ
Sbjct: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQ 120

Query: 121 GFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDG 180
           GFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDG
Sbjct: 121 GFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDG 180

Query: 181 GFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQW 240
           GFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQW
Sbjct: 181 GFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQW 240

Query: 241 VAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDRE 300
           VAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDRE
Sbjct: 241 VAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDRE 300

Query: 301 AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 360
           AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL
Sbjct: 301 AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 360

Query: 361 SSSRRKKAELLEVGIGISMV 381
           SSSRRKKAE   +  G   +
Sbjct: 361 SSSRRKKAEFGNLNYGADTI 380

[Close]

BLAST of Spo23424.1 vs. NCBI nr
Match: gi|731366650|ref|XP_010695186.1| (PREDICTED: uncharacterized protein LOC104907867 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 591.3 bits (1523), Expect = 1.500e-165
Identity = 288/370 (77.84%), Postives = 320/370 (86.49%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSST ++RPKSSP NPNS II N + + SSSSTLTSLLAEVEPPPNLLPSKSDFL L A
Sbjct: 1   MSSSTSRKRPKSSPQNPNSSIISNHTHSPSSSSTLTSLLAEVEPPPNLLPSKSDFLKLFA 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQ 120
           ++ IAA+V   CN      NRPP+ FCDSDVVE D S+ DSCEPCP NGRCYKG+LEC Q
Sbjct: 61  VITIAALVGAFCNFSFNLFNRPPLSFCDSDVVEYDASIADSCEPCPSNGRCYKGKLECAQ 120

Query: 121 GFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDG 180
           G+RKYGKLCIEDGDIYEAAKKLSGW KD LCEAHAQYMC GTGA+WVSE++L NMLDKDG
Sbjct: 121 GYRKYGKLCIEDGDIYEAAKKLSGWTKDRLCEAHAQYMCGGTGAIWVSEDNLKNMLDKDG 180

Query: 181 GFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQW 240
            F+ ST D D+K +Y+KEKAMEDI G ++TR +GNG KE KCPD LA +YK + CRA+QW
Sbjct: 181 LFEVSTTD-DMKSVYTKEKAMEDIRGLLETRIVGNGVKEYKCPDVLAGNYKPIICRAQQW 240

Query: 241 VAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDRE 300
           +AKNL+LL+AVFALLAGCTLLLLRIRR WYL K+ EHLYHQVCDTLEDNALM RSMGD+E
Sbjct: 241 IAKNLVLLMAVFALLAGCTLLLLRIRRSWYLAKKAEHLYHQVCDTLEDNALMYRSMGDKE 300

Query: 301 AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 360
            WL+ASRLRDH+LTPKERRDPLLWKMVE LVESDSRLDRYPKLVKGESKVVWEWQVEGSL
Sbjct: 301 PWLIASRLRDHLLTPKERRDPLLWKMVEDLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 360

Query: 361 SSSRRKKAEL 371
           SSSRRKK E+
Sbjct: 361 SSSRRKKEEI 369

[Close]

BLAST of Spo23424.1 vs. NCBI nr
Match: gi|567888538|ref|XP_006436791.1| (hypothetical protein CICLE_v10031769mg [Citrus clementina])

HSP 1 Score: 388.7 bits (997), Expect = 1.400e-104
Identity = 197/372 (52.96%), Postives = 267/372 (71.77%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSST K+RPK            + S + SSSS+ +S     EPP +L PSK D L LI 
Sbjct: 1   MSSSTKKKRPKPK----------SNSSSSSSSSSSSSWSWMTEPPQSLFPSKQDLLRLIT 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVV-ESDVSLLDSCEPCPINGRCYKGQLECI 120
           +V IA+ VA+ CN ++ F+N     FCDS+++ +S  S  DSCEPCP NG C++G+LEC 
Sbjct: 61  VVAIASSVALTCNYLANFLNSTSKPFCDSNLLLDSPQSPTDSCEPCPSNGECHQGKLECF 120

Query: 121 QGFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKD 180
            G+RK+GKLC+EDGDI E A +LS W ++ LC A+AQ++CDGTG++WV E D+ N L+  
Sbjct: 121 HGYRKHGKLCVEDGDINETAGRLSRWVENRLCRAYAQFLCDGTGSIWVEENDIWNDLEGH 180

Query: 181 GGFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQ 240
              +   +D  + YLY+K++ ME +  ++++RT   G KE+KCP+ LAE YK ++CR  Q
Sbjct: 181 ELMKIFELDNPV-YLYTKKRTMETVGRYLESRTNSYGMKELKCPELLAEHYKPLSCRIHQ 240

Query: 241 WVAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSM-GD 300
           WV+ + L+++ V +LL GC LLL ++ RR Y   RVE LYHQVC+ LE+NALMS+S+ G+
Sbjct: 241 WVSTHALIIVPVCSLLVGCLLLLWKVHRRRYFAIRVEELYHQVCEILEENALMSKSVNGE 300

Query: 301 REAWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEG 360
            E W+VASRLRDH+L PKER+DP++WK VE LV+ DSR+D+YPKL+KGESKVVWEWQVEG
Sbjct: 301 CEPWVVASRLRDHLLLPKERKDPVIWKKVEELVQEDSRVDQYPKLLKGESKVVWEWQVEG 360

Query: 361 SLSSSR-RKKAE 370
           SLSSS+ RKK E
Sbjct: 361 SLSSSKMRKKGE 361

[Close]

BLAST of Spo23424.1 vs. NCBI nr
Match: gi|568863993|ref|XP_006485398.1| (PREDICTED: uncharacterized protein LOC102629601 isoform X1 [Citrus sinensis])

HSP 1 Score: 388.7 bits (997), Expect = 1.400e-104
Identity = 197/372 (52.96%), Postives = 267/372 (71.77%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSST K+RPK            + S + SSSS+ +S     EPP +L PSK D L LI 
Sbjct: 1   MSSSTKKKRPKPK----------SNSSSSSSSSSSSSWSWMTEPPQSLFPSKQDLLRLIT 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVV-ESDVSLLDSCEPCPINGRCYKGQLECI 120
           +V IA+ VA+ CN ++ F+N     FCDS+++ +S  S  DSCEPCP NG C++G+LEC 
Sbjct: 61  VVAIASSVALTCNYLANFLNSTSKPFCDSNLLLDSPQSPTDSCEPCPSNGECHQGKLECF 120

Query: 121 QGFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKD 180
            G+RK+GKLC+EDGDI E A +LS W ++ LC A+AQ++CDGTG++WV E D+ N L+  
Sbjct: 121 HGYRKHGKLCVEDGDINETAGRLSRWVENRLCRAYAQFLCDGTGSIWVEENDIWNDLEGH 180

Query: 181 GGFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQ 240
              +   +D  + YLY+K++ ME +  ++++RT   G KE+KCP+ LAE YK ++CR  Q
Sbjct: 181 ELMKIFELDNPV-YLYTKKRTMETVGRYLESRTNSYGMKELKCPELLAEHYKPLSCRIHQ 240

Query: 241 WVAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSM-GD 300
           WV+ + L+++ V +LL GC LLL ++ RR Y   RVE LYHQVC+ LE+NALMS+S+ G+
Sbjct: 241 WVSTHALIIVPVCSLLVGCLLLLWKVHRRRYFAIRVEELYHQVCEILEENALMSKSVNGE 300

Query: 301 REAWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEG 360
            E W+VASRLRDH+L PKER+DP++WK VE LV+ DSR+D+YPKL+KGESKVVWEWQVEG
Sbjct: 301 CEPWVVASRLRDHLLLPKERKDPVIWKKVEELVQEDSRVDQYPKLLKGESKVVWEWQVEG 360

Query: 361 SLSSSR-RKKAE 370
           SLSSS+ RKK E
Sbjct: 361 SLSSSKMRKKGE 361

[Close]

BLAST of Spo23424.1 vs. NCBI nr
Match: gi|1009157444|ref|XP_015896760.1| (PREDICTED: uncharacterized protein LOC107430442 [Ziziphus jujuba])

HSP 1 Score: 380.2 bits (975), Expect = 5.100e-102
Identity = 202/367 (55.04%), Postives = 258/367 (70.30%), Query Frame = 1


		  
Query: 3   SSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIAIV 62
           S+TPK+RPK  P  PN     +     SSSS+L S+L   EPP N  PSK DFL LIA++
Sbjct: 4   SATPKKRPKPKP-KPNGGC--SSDSVPSSSSSLKSIL---EPPQNFFPSKDDFLRLIAVL 63

Query: 63  IIAAVVAVLCNSISRFV-NRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQG 122
            IA  V + CN  + F+ NR    FCD+ VV+S  SL D CEPCP NG CY+G+LEC  G
Sbjct: 64  AIATSVTLACNFFATFLLNRESKPFCDTTVVDSLDSLYDFCEPCPSNGHCYEGKLECDHG 123

Query: 123 FRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDGG 182
           +RK+GKLCIEDG+I + AKKLS W + HLCEA+AQY+CDGTG +WV E D+ N LD    
Sbjct: 124 YRKHGKLCIEDGEIIKTAKKLSEWIELHLCEANAQYLCDGTGKIWVPENDIWNDLDGHKL 183

Query: 183 FQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQWV 242
            +    D  +  ++ K K ME I   +++RT  +G KE+KCPD LAE YK  +C   Q +
Sbjct: 184 MEHVGSDNAVN-IHIKRKTMEIIGKVLESRTNPHGFKEIKCPDVLAEQYKPFSCHLYQLI 243

Query: 243 AKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMS-RSMGDRE 302
           +KN +L++ V ALL GCTLLL ++R+R YL+ RVE LY QVC+ LE+NALMS R  G+ E
Sbjct: 244 SKNAILILPVCALLVGCTLLLWKVRQRQYLSTRVEELYRQVCEILEENALMSKRGEGECE 303

Query: 303 AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 362
           +W+VASRLRDH+L+PKER++  LWK VE LV+ DSR+DRYPKLVKGE KVVWEWQVEG L
Sbjct: 304 SWVVASRLRDHLLSPKERKNHALWKQVEELVQEDSRVDRYPKLVKGEPKVVWEWQVEGFL 363

Query: 363 SSSRRKK 368
           S ++ +K
Sbjct: 364 SPAKTRK 363

[Close]

BLAST of Spo23424.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154050 PE=4 SV=1)

HSP 1 Score: 743.8 bits (1919), Expect = 1.200e-211
Identity = 370/380 (97.37%), Postives = 372/380 (97.89%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA
Sbjct: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQ 120
           IVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQ
Sbjct: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQ 120

Query: 121 GFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDG 180
           GFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDG
Sbjct: 121 GFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDG 180

Query: 181 GFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQW 240
           GFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQW
Sbjct: 181 GFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQW 240

Query: 241 VAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDRE 300
           VAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDRE
Sbjct: 241 VAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDRE 300

Query: 301 AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 360
           AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL
Sbjct: 301 AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 360

Query: 361 SSSRRKKAELLEVGIGISMV 381
           SSSRRKKAE   +  G   +
Sbjct: 361 SSSRRKKAEFGNLNYGADTI 380

[Close]

BLAST of Spo23424.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BCN5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g123320 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 1.000e-165
Identity = 288/370 (77.84%), Postives = 320/370 (86.49%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSST ++RPKSSP NPNS II N + + SSSSTLTSLLAEVEPPPNLLPSKSDFL L A
Sbjct: 1   MSSSTSRKRPKSSPQNPNSSIISNHTHSPSSSSTLTSLLAEVEPPPNLLPSKSDFLKLFA 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQ 120
           ++ IAA+V   CN      NRPP+ FCDSDVVE D S+ DSCEPCP NGRCYKG+LEC Q
Sbjct: 61  VITIAALVGAFCNFSFNLFNRPPLSFCDSDVVEYDASIADSCEPCPSNGRCYKGKLECAQ 120

Query: 121 GFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDG 180
           G+RKYGKLCIEDGDIYEAAKKLSGW KD LCEAHAQYMC GTGA+WVSE++L NMLDKDG
Sbjct: 121 GYRKYGKLCIEDGDIYEAAKKLSGWTKDRLCEAHAQYMCGGTGAIWVSEDNLKNMLDKDG 180

Query: 181 GFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQW 240
            F+ ST D D+K +Y+KEKAMEDI G ++TR +GNG KE KCPD LA +YK + CRA+QW
Sbjct: 181 LFEVSTTD-DMKSVYTKEKAMEDIRGLLETRIVGNGVKEYKCPDVLAGNYKPIICRAQQW 240

Query: 241 VAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSMGDRE 300
           +AKNL+LL+AVFALLAGCTLLLLRIRR WYL K+ EHLYHQVCDTLEDNALM RSMGD+E
Sbjct: 241 IAKNLVLLMAVFALLAGCTLLLLRIRRSWYLAKKAEHLYHQVCDTLEDNALMYRSMGDKE 300

Query: 301 AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 360
            WL+ASRLRDH+LTPKERRDPLLWKMVE LVESDSRLDRYPKLVKGESKVVWEWQVEGSL
Sbjct: 301 PWLIASRLRDHLLTPKERRDPLLWKMVEDLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 360

Query: 361 SSSRRKKAEL 371
           SSSRRKK E+
Sbjct: 361 SSSRRKKEEI 369

[Close]

BLAST of Spo23424.1 vs. UniProtKB/TrEMBL
Match: V4TJQ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031769mg PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.000e-104
Identity = 197/372 (52.96%), Postives = 267/372 (71.77%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSST K+RPK            + S + SSSS+ +S     EPP +L PSK D L LI 
Sbjct: 1   MSSSTKKKRPKPK----------SNSSSSSSSSSSSSWSWMTEPPQSLFPSKQDLLRLIT 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVV-ESDVSLLDSCEPCPINGRCYKGQLECI 120
           +V IA+ VA+ CN ++ F+N     FCDS+++ +S  S  DSCEPCP NG C++G+LEC 
Sbjct: 61  VVAIASSVALTCNYLANFLNSTSKPFCDSNLLLDSPQSPTDSCEPCPSNGECHQGKLECF 120

Query: 121 QGFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKD 180
            G+RK+GKLC+EDGDI E A +LS W ++ LC A+AQ++CDGTG++WV E D+ N L+  
Sbjct: 121 HGYRKHGKLCVEDGDINETAGRLSRWVENRLCRAYAQFLCDGTGSIWVEENDIWNDLEGH 180

Query: 181 GGFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQ 240
              +   +D  + YLY+K++ ME +  ++++RT   G KE+KCP+ LAE YK ++CR  Q
Sbjct: 181 ELMKIFELDNPV-YLYTKKRTMETVGRYLESRTNSYGMKELKCPELLAEHYKPLSCRIHQ 240

Query: 241 WVAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSM-GD 300
           WV+ + L+++ V +LL GC LLL ++ RR Y   RVE LYHQVC+ LE+NALMS+S+ G+
Sbjct: 241 WVSTHALIIVPVCSLLVGCLLLLWKVHRRRYFAIRVEELYHQVCEILEENALMSKSVNGE 300

Query: 301 REAWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEG 360
            E W+VASRLRDH+L PKER+DP++WK VE LV+ DSR+D+YPKL+KGESKVVWEWQVEG
Sbjct: 301 CEPWVVASRLRDHLLLPKERKDPVIWKKVEELVQEDSRVDQYPKLLKGESKVVWEWQVEG 360

Query: 361 SLSSSR-RKKAE 370
           SLSSS+ RKK E
Sbjct: 361 SLSSSKMRKKGE 361

[Close]

BLAST of Spo23424.1 vs. UniProtKB/TrEMBL
Match: A0A067DQD2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016022mg PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.000e-104
Identity = 197/372 (52.96%), Postives = 267/372 (71.77%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSST K+RPK            + S + SSSS+ +S     EPP +L PSK D L LI 
Sbjct: 1   MSSSTKKKRPKPK----------SNSSSSSSSSSSSSWSWMTEPPQSLFPSKQDLLRLIT 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVV-ESDVSLLDSCEPCPINGRCYKGQLECI 120
           +V IA+ VA+ CN ++ F+N     FCDS+++ +S  S  DSCEPCP NG C++G+LEC 
Sbjct: 61  VVAIASSVALTCNYLANFLNSTSKPFCDSNLLLDSPQSPTDSCEPCPSNGECHQGKLECF 120

Query: 121 QGFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKD 180
            G+RK+GKLC+EDGDI E A +LS W ++ LC A+AQ++CDGTG++WV E D+ N L+  
Sbjct: 121 HGYRKHGKLCVEDGDINETAGRLSRWVENRLCRAYAQFLCDGTGSIWVEENDIWNDLEGH 180

Query: 181 GGFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQ 240
              +   +D  + YLY+K++ ME +  ++++RT   G KE+KCP+ LAE YK ++CR  Q
Sbjct: 181 ELMKIFELDNPV-YLYTKKRTMETVGRYLESRTNSYGMKELKCPELLAEHYKPLSCRIHQ 240

Query: 241 WVAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSM-GD 300
           WV+ + L+++ V +LL GC LLL ++ RR Y   RVE LYHQVC+ LE+NALMS+S+ G+
Sbjct: 241 WVSTHALIIVPVCSLLVGCLLLLWKVHRRRYFAIRVEELYHQVCEILEENALMSKSVNGE 300

Query: 301 REAWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEG 360
            E W+VASRLRDH+L PKER+DP++WK VE LV+ DSR+D+YPKL+KGESKVVWEWQVEG
Sbjct: 301 CEPWVVASRLRDHLLLPKERKDPVIWKKVEELVQEDSRVDQYPKLLKGESKVVWEWQVEG 360

Query: 361 SLSSSR-RKKAE 370
           SLSSS+ RKK E
Sbjct: 361 SLSSSKMRKKGE 361

[Close]

BLAST of Spo23424.1 vs. UniProtKB/TrEMBL
Match: A0A067DLB6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016022mg PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.000e-104
Identity = 197/372 (52.96%), Postives = 267/372 (71.77%), Query Frame = 1


		  
Query: 1   MSSSTPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIA 60
           MSSST K+RPK            + S + SSSS+ +S     EPP +L PSK D L LI 
Sbjct: 1   MSSSTKKKRPKPK----------SNSSSSSSSSSSSSWSWMTEPPQSLFPSKQDLLRLIT 60

Query: 61  IVIIAAVVAVLCNSISRFVNRPPILFCDSDVV-ESDVSLLDSCEPCPINGRCYKGQLECI 120
           +V IA+ VA+ CN ++ F+N     FCDS+++ +S  S  DSCEPCP NG C++G+LEC 
Sbjct: 61  VVAIASSVALTCNYLANFLNSTSKPFCDSNLLLDSPQSPTDSCEPCPSNGECHQGKLECF 120

Query: 121 QGFRKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKD 180
            G+RK+GKLC+EDGDI E A +LS W ++ LC A+AQ++CDGTG++WV E D+ N L+  
Sbjct: 121 HGYRKHGKLCVEDGDINETAGRLSRWVENRLCRAYAQFLCDGTGSIWVEENDIWNDLEGH 180

Query: 181 GGFQGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQ 240
              +   +D  + YLY+K++ ME +  ++++RT   G KE+KCP+ LAE YK ++CR  Q
Sbjct: 181 ELMKIFELDNPV-YLYTKKRTMETVGRYLESRTNSYGMKELKCPELLAEHYKPLSCRIHQ 240

Query: 241 WVAKNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRSM-GD 300
           WV+ + L+++ V +LL GC LLL ++ RR Y   RVE LYHQVC+ LE+NALMS+S+ G+
Sbjct: 241 WVSTHALIIVPVCSLLVGCLLLLWKVHRRRYFAIRVEELYHQVCEILEENALMSKSVNGE 300

Query: 301 REAWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEG 360
            E W+VASRLRDH+L PKER+DP++WK VE LV+ DSR+D+YPKL+KGESKVVWEWQVEG
Sbjct: 301 CEPWVVASRLRDHLLLPKERKDPVIWKKVEELVQEDSRVDQYPKLLKGESKVVWEWQVEG 360

Query: 361 SLSSSR-RKKAE 370
           SLSSS+ RKK E
Sbjct: 361 SLSSSKMRKKGE 361

[Close]

BLAST of Spo23424.1 vs. TAIR (Arabidopsis)
Match: AT5G46560.1 (Inner nuclear membrane protein MAN1 (InterPro:IPR018996))

HSP 1 Score: 313.2 bits (801), Expect = 2.700e-85
Identity = 164/367 (44.69%), Postives = 238/367 (64.85%), Query Frame = 1


		  
Query: 4   STPKRRPKSSPINPNSKIIPNQSQNHSSSSTLTSLLAEVEPPPNLLPSKSDFLNLIAIVI 63
           S P++RPKS              +   SSS+ + + + +EPP +L PSK +F  L+ +++
Sbjct: 3   SIPRKRPKSET---------RTGRTPKSSSSSSPIRSMLEPPQSLFPSKGEFFTLLKVLL 62

Query: 64  IAAVVAVLCNSISRFV-NRPPILFCDSDVVESDVSLLDSCEPCPINGRCYKGQLECIQGF 123
           +A  VA  CN +S+ + + P   FCDS+    D S LD CEPCPING CY+G+L+C  G+
Sbjct: 63  VACAVAFTCNFLSKSLSSNPSKSFCDSNFNPID-SDLDICEPCPINGECYQGKLQCNLGY 122

Query: 124 RKYGKLCIEDGDIYEAAKKLSGWAKDHLCEAHAQYMCDGTGAVWVSEEDLMNMLDKDGGF 183
           +    LC+EDG+I E+ KKL G+ +  +CE++A   C GTG +WV E D+   L  +   
Sbjct: 123 KNQRNLCVEDGEINESTKKLVGYFERKVCESYAHNECYGTGTIWVPENDVWTELRSNSFL 182

Query: 184 QGSTVDVDIKYLYSKEKAMEDINGFMDTRTIGNGDKEVKCPDELAESYKTMTCRARQWVA 243
             S +D +  Y + K KA+E +   ++ RT  NG  E+KCP+ +A+SYK +TCR  QW+ 
Sbjct: 183 --SNLD-ESAYNFLKGKAVEGVTELLEKRTNSNGIDELKCPESVAKSYKPLTCRLHQWIL 242

Query: 244 KNLLLLIAVFALLAGCTLLLLRIRRRWYLTKRVEHLYHQVCDTLEDNALMSRS--MGDRE 303
           +++L++ +  A+L G  +L  RI+R+   ++RVE LY QVCD LE+NA+ S S    + E
Sbjct: 243 RHILIISSSCAMLVGSAMLRRRIQRKQCFSRRVEELYDQVCDFLEENAVASNSAETSNCE 302

Query: 304 AWLVASRLRDHILTPKERRDPLLWKMVEGLVESDSRLDRYPKLVKGESKVVWEWQVEGSL 363
            W++AS LRD++L P+ERRDPLLW  VE L++ DSR+DRY KL+KGE KVVWEWQVEGSL
Sbjct: 303 PWVIASWLRDYLLLPRERRDPLLWTKVEELIKEDSRIDRYEKLLKGEKKVVWEWQVEGSL 356

Query: 364 SSSRRKK 368
           S S+ KK
Sbjct: 363 SLSKLKK 356

The following BLAST results are available for this feature:

BLAST of Spo23424.1 vs. NCBI nr
BLAST of Spo23424.1 vs. UniProtKB/TrEMBL
BLAST of Spo23424.1 vs. ExPASy Swiss-Prot
BLAST of Spo23424.1 vs. TAIR (Arabidopsis)

BLAST of Spo23424.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902179603\|gb\|KNA09383.1\|	1.8e-211	97.3	hypothetical protein SOVF_1540...	[more]
gi\|731366650\|ref\|XP_010695186.1\|	1.5e-165	77.8	PREDICTED: uncharacterized pro...	[more]
gi\|567888538\|ref\|XP_006436791.1\|	1.4e-104	52.9	hypothetical protein CICLE_v10...	[more]
gi\|568863993\|ref\|XP_006485398.1\|	1.4e-104	52.9	PREDICTED: uncharacterized pro...	[more]
gi\|1009157444\|ref\|XP_015896760.1\|	5.1e-102	55.0	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo23424.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QRR9_SPIOL	1.2e-211	97.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8BCN5_BETVU	1.0e-165	77.8	Uncharacterized protein OS=Bet...	[more]
V4TJQ6_9ROSI	1.0e-104	52.9	Uncharacterized protein OS=Cit...	[more]
A0A067DQD2_CITSI	1.0e-104	52.9	Uncharacterized protein OS=Cit...	[more]
A0A067DLB6_CITSI	1.0e-104	52.9	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo23424.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo23424.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G46560.1	2.7e-85	44.6	Inner nuclear membrane protein...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018996	Inner nuclear membrane protein MAN1	PFAM	PF09402	MSC	coord: 87..354 score: 9.0
None	No IPR available	PANTHER	PTHR13428	INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN	coord: 1..364 score: 5.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005639	integral component of nuclear inner membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12090	0.67	Barchart \| Table