Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACCACCTCCACCAATCACCAACTCCAATCCACCAAAATCTTCGTCTATGGAACCCTCAAACGAGGCTTCCCAAACCACCACTTCTTAGAAAACCTCACCGCCTCAAACGACGCCGTTTTCCTTGGCTGCTACAAGACTATCAACTCCTACCCTCTGGTATGCGGGCCCCTTGGTATCCCCTTCTTAATCAACATCCCCGGGTCAGGCCACCGGGTATTGGGTGAGCTCTACTCGGTATCGGGCCAGGCCCTGGCCCGGCTCGATGAGCTTGAAGGGATCAGCCGTGGACACTATGAGCGGCTTTCGTTGGAGGTGGTGACGGAGGAGGAAGGTGAGCCGCGGGTGACGGTAGCAGAGGGGTATTTTGGGCACCGTAGTTTTGGGGAGGAAATGTGGAGAAAAAATGGAGAATTGGGAATGGAAGAGTATATGGATAAAGAAGGGGAGAAATATGTTAGGGTTGAAGATCGAGATGTTGGGTTGAATTTGAGGGATTATATTCGAGTGTATCTTCAATCTCATGATCATCAATCATCAATTCATCATCCATCTAGTTGA ATGTCCACCACCTCCACCAATCACCAACTCCAATCCACCAAAATCTTCGTCTATGGAACCCTCAAACGAGGCTTCCCAAACCACCACTTCTTAGAAAACCTCACCGCCTCAAACGACGCCGTTTTCCTTGGCTGCTACAAGACTATCAACTCCTACCCTCTGGTATGCGGGCCCCTTGGTATCCCCTTCTTAATCAACATCCCCGGGTCAGGCCACCGGGTATTGGGTGAGCTCTACTCGGTATCGGGCCAGGCCCTGGCCCGGCTCGATGAGCTTGAAGGGATCAGCCGTGGACACTATGAGCGGCTTTCGTTGGAGGTGGTGACGGAGGAGGAAGGTGAGCCGCGGGTGACGGTAGCAGAGGGGTATTTTGGGCACCGTAGTTTTGGGGAGGAAATGTGGAGAAAAAATGGAGAATTGGGAATGGAAGAGTATATGGATAAAGAAGGGGAGAAATATGTTAGGGTTGAAGATCGAGATGTTGGGTTGAATTTGAGGGATTATATTCGAGTGTATCTTCAATCTCATGATCATCAATCATCAATTCATCATCCATCTAGTTGA ATGTCCACCACCTCCACCAATCACCAACTCCAATCCACCAAAATCTTCGTCTATGGAACCCTCAAACGAGGCTTCCCAAACCACCACTTCTTAGAAAACCTCACCGCCTCAAACGACGCCGTTTTCCTTGGCTGCTACAAGACTATCAACTCCTACCCTCTGGTATGCGGGCCCCTTGGTATCCCCTTCTTAATCAACATCCCCGGGTCAGGCCACCGGGTATTGGGTGAGCTCTACTCGGTATCGGGCCAGGCCCTGGCCCGGCTCGATGAGCTTGAAGGGATCAGCCGTGGACACTATGAGCGGCTTTCGTTGGAGGTGGTGACGGAGGAGGAAGGTGAGCCGCGGGTGACGGTAGCAGAGGGGTATTTTGGGCACCGTAGTTTTGGGGAGGAAATGTGGAGAAAAAATGGAGAATTGGGAATGGAAGAGTATATGGATAAAGAAGGGGAGAAATATGTTAGGGTTGAAGATCGAGATGTTGGGTTGAATTTGAGGGATTATATTCGAGTGTATCTTCAATCTCATGATCATCAATCATCAATTCATCATCCATCTAGTTGA MSTTSTNHQLQSTKIFVYGTLKRGFPNHHFLENLTASNDAVFLGCYKTINSYPLVCGPLGIPFLINIPGSGHRVLGELYSVSGQALARLDELEGISRGHYERLSLEVVTEEEGEPRVTVAEGYFGHRSFGEEMWRKNGELGMEEYMDKEGEKYVRVEDRDVGLNLRDYIRVYLQSHDHQSSIHHPSS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo23285.1 vs. NCBI nr
Match: gi|902197379|gb|KNA13411.1| (hypothetical protein SOVF_117310 [Spinacia oleracea]) HSP 1 Score: 382.1 bits (980), Expect = 5.600e-103 Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 1
BLAST of Spo23285.1 vs. NCBI nr
Match: gi|731367367|ref|XP_010695570.1| (PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 307.8 bits (787), Expect = 1.300e-80 Identity = 146/177 (82.49%), Postives = 162/177 (91.53%), Query Frame = 1
BLAST of Spo23285.1 vs. NCBI nr
Match: gi|870844691|gb|KMS97606.1| (hypothetical protein BVRB_5g125750 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 299.7 bits (766), Expect = 3.600e-78 Identity = 142/171 (83.04%), Postives = 156/171 (91.23%), Query Frame = 1
BLAST of Spo23285.1 vs. NCBI nr
Match: gi|698571600|ref|XP_009774917.1| (PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Nicotiana sylvestris]) HSP 1 Score: 190.3 bits (482), Expect = 3.100e-45 Identity = 97/173 (56.07%), Postives = 122/173 (70.52%), Query Frame = 1
BLAST of Spo23285.1 vs. NCBI nr
Match: gi|697098464|ref|XP_009626834.1| (PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Nicotiana tomentosiformis]) HSP 1 Score: 189.1 bits (479), Expect = 6.900e-45 Identity = 96/162 (59.26%), Postives = 114/162 (70.37%), Query Frame = 1
BLAST of Spo23285.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1K8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117310 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 3.900e-103 Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 1
BLAST of Spo23285.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9I3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g125750 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.500e-78 Identity = 142/171 (83.04%), Postives = 156/171 (91.23%), Query Frame = 1
BLAST of Spo23285.1 vs. UniProtKB/TrEMBL
Match: W9RN33_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023243 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.400e-44 Identity = 89/156 (57.05%), Postives = 113/156 (72.44%), Query Frame = 1
BLAST of Spo23285.1 vs. UniProtKB/TrEMBL
Match: V7CN11_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G140900g PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 7.000e-44 Identity = 90/159 (56.60%), Postives = 117/159 (73.58%), Query Frame = 1
BLAST of Spo23285.1 vs. UniProtKB/TrEMBL
Match: A0A068U9F0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017526001 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.000e-43 Identity = 91/161 (56.52%), Postives = 116/161 (72.05%), Query Frame = 1
BLAST of Spo23285.1 vs. ExPASy Swiss-Prot
Match: Y2910_ARATH (Putative gamma-glutamylcyclotransferase At3g02910 OS=Arabidopsis thaliana GN=At3g02910 PE=2 SV=2) HSP 1 Score: 167.2 bits (422), Expect = 1.800e-40 Identity = 83/174 (47.70%), Postives = 112/174 (64.37%), Query Frame = 1
BLAST of Spo23285.1 vs. ExPASy Swiss-Prot
Match: GGACB_DANRE (Gamma-glutamylaminecyclotransferase B OS=Danio rerio GN=ggact.2 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.800e-14 Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 1
BLAST of Spo23285.1 vs. ExPASy Swiss-Prot
Match: GGACT_RAT (Gamma-glutamylaminecyclotransferase OS=Rattus norvegicus GN=Ggact PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.800e-13 Identity = 48/101 (47.52%), Postives = 62/101 (61.39%), Query Frame = 1
BLAST of Spo23285.1 vs. ExPASy Swiss-Prot
Match: GGACT_BOVIN (Gamma-glutamylaminecyclotransferase OS=Bos taurus GN=GGACT PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.400e-13 Identity = 46/97 (47.42%), Postives = 54/97 (55.67%), Query Frame = 1
BLAST of Spo23285.1 vs. ExPASy Swiss-Prot
Match: YS11_DROME (Putative gamma-glutamylcyclotransferase CG2811 OS=Drosophila melanogaster GN=CG2811 PE=2 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 3.100e-13 Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 1
BLAST of Spo23285.1 vs. TAIR (Arabidopsis)
Match: AT3G02910.1 (AIG2-like (avirulence induced gene) family protein) HSP 1 Score: 167.2 bits (422), Expect = 9.900e-42 Identity = 83/174 (47.70%), Postives = 112/174 (64.37%), Query Frame = 1
BLAST of Spo23285.1 vs. TAIR (Arabidopsis)
Match: AT5G46720.1 (AIG2-like (avirulence induced gene) family protein) HSP 1 Score: 161.0 bits (406), Expect = 7.100e-40 Identity = 83/164 (50.61%), Postives = 108/164 (65.85%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23285.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo23285.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo23285.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo23285.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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