Spo23141 (gene)

Overview
NameSpo23141
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPhotosystem I reaction center subunit VI
Locationchr4 : 120604044 .. 120608183 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAAGATATTACTCCTAATTTCACAAGTTTTTAACCCAAATCAAGGAGAATCAAAATAGATAGGCTTATCCAACTCAAAATCCAAGTGTCACACTCTGGTAGGAGTTCCACATCTATCCCATGAACACCACCAATGCCACGTGGACAACTTAGATTCATTCTGTTCCACAAAAACTTAAACATTGGCTATATACCAATTTGCCAAATTTGAAACATATCAAAAGAAAATCTTCACTTGGAACAAACACACACACACACCCAAATAATGGCCTCTCTAGCAACCTTAGCTGCCGTCCAGCCCACCACCCTTAAGGGCCTTGCTGGAAGCTCCGTCGCCGGCACTAAGCTCCACATCAAGCCCGCCCGCCAGAGCTTCAAGCTCAACAACGTCAGGTAAATATTCTCTCTGTCCGGAATTAATAGTCACGTTAGTCATTGTAATTATAACTACCGGTTTTAGTTTTGTAAGTCATACTTCCTCTGATTTTTAATATTTGCAACGTTGGTTACTTTCACGTTTGCCTGCACAACTTTTATAATTAATATCGTTAACTCTCTTTAAGCAAAAATTATAAAATGTTAATATTTTGAAAATACAAATTGAGACGAATCTAACAAGATCCTAAATGACTATGTTTTATCTTACATATAAATCACTATCAATAGTCAAAATAGAATATGTGAATAGTTTAATATACACAAACGTTGCGAGTATTAAAAATCGGAGCAAAAGTTATTTAGATTGAATTATGAACTAAAAAATAATCTTATTTATAATAATTAAACAATAATCATGTTGATTTTGAAAACTGACAATGAAATACTAAAAACTCCTCTTTTTGATTTTTAATTTTGTAAAAAGACAAAAAACTAAACAAATTTAATGGTTACTTATGTTGTATGGTAATTATTATGTGAACAGGAGTGGTGCAATTGTAGCCAAGTATGGTGACAAGAGTGTTTACTTTGATTTGGAAGATATAGCAAACACCACTGGTCAATGGGATGTCTATGGATCAGATGCACCTTCACCTTACAACTCTCTTCAGGTACAATTCATTTTCACTTCCTATTTAAGTTCTTATTTTATTTCACAATTCACATGTCACATAATTAGTGCTTAAGTGAACAACTACGAGTCCTTATTCTGCAATTAATTCTGCAATTAATTATCACGTTGATAATGTAATTTGAACTAGTTTTACATCAGCTAAATCTAGACTAAGAGCATCAATATTAACTAACTCTTAGCCCCCTCTTAATTTTCTCTTTCCTTAAGAGTTAACTCTTAGATAAAATGTGGTAACTCTTAGCCCCCTCTTATTTAGAGGTTGATTGAGACATCCTCTAAATAAGAGGTAACTCTTAGAAATAAGAGTGGGGTTGAGGTGGAGGTTTGTGTTTGATTTGTGATTTTTATTTTATTTTTAAAAAGGAAAAATATGTTAAAAGGTAGTTAAGAGATAGTAAATAAGAGATAGTCTATTTCTTGGGTTTTTTGATGGGTAACTCTTATTAAGGCCCTGTTCGGCAAAATTAGCGGTAGCGGGTAGCGGTTAGCGGTTGAGTAGCGGGTAGCGGTTAAAGTAGCGAGTAGCGGTGAATAGTAGCGGGTGACGGATAGCTGTCGAAGTAGCGGTAACTAATATGAGTGTTCGGTAAAAGTAGCGGTTGATATTATAAAAATAAAAATAAAAGCAAGAATATTATTTAAAACTTTATTATAAATTTGTCAAACGCTACCCGCTACCTTAAACGCTACTAATTTTAACGTTTGACAAAAGCTACCCAACCGCTACCTCAACCGCTAACCGCTACCTAAATCGCTACTTTACCAAAACACTTACAGATTTTACAAGTAGCGTCTTGACTAGGTCAAAACGCTATCCGCTACCTCAAACGCTACCGCCGAACACGCCCTAAGAGATGGTGGTGATGTGGATGAGAGAAGGGACTAAGAGGGGGTAAATAAGAGTTATCTTACAATTGATGCTCTAAGCCACTAAGGTAGGTGTTGCTAGAGCACTATTGTGTTTTAAGTGTTGCTCTATCTTAGAGATATGTTCATCACCTTCTCAAGGCGTTTAAGTGTTGGACTTAATTCTAATTCAAATTTACATGCCATAGTGCATGAATATATTGTCCATTTCCAATCACTTATTTGCTAAGAAAATATATTTTGATCTATAATAAATCATCTTCTTGAATTTTATTCAATTAACTATAGTAGCTCGACTAGAACCCATCTCCTAAAATTTTGGAAACTCACTAGTCCTAACGTAAAAAGATATTAAGCTCTGTTTATTTTGACTGAAAACACTTTGCTGGAATAGAAATGAAAGATTTAAGATGCGTTTGACTTATAAGTTTTGAGCATTGCGCGCTCAGTGGCAGATCTAGAAATTGTACTAAGTGGGGTCACTATTACAAAATTACTAAAAATTTAACTAAATTAAGTATTTTTTTTTAATACAAATTAGTCGAAAATTAACTAAAATTATGCAAATATTTCGGCCAAGTGGGGTCAAGTGACCCACTCAGCAAACATTGGATCCGCCAATGTGCGTGCTTAGCCTTTTATTTGATTATACTTGAAAATCTTGAACATGTCATCATTATCATTACCCCCATTGCTCCAAAGATGCTCCCGCAAGAAGCGGAGTAAGGGGGGTCGAATGTACGCAACCTTACCCCTGCAATTGTAGAGAGATTCTTAAACATGTAACTCTTGAAAAAGACTAGTAATAGATTGCATTAAAACTATATGAAATGAATTATCTATCATGTAACAGAGCAAATTCTTTGAGACATTTGCTGCTCCATTCACAAAGAGAGGATTGTTGCTCAAGTTCTTGATATTGGGAGGTGGTTCTTTGCTCACATACGTCAGTGCCAATGCTCCTCAAGATGTTCTACCTATCACCAGAGGTCCACAACAACCTCCTAAGCTTGGACCTCGTGGGAAGATCTAAACAATCTTTTTTTATTTCTCAATGTAATATTATTCATTGTAAAACTCAAAATCATCTTTAATTGAAATGTACAATTTTAAGAACACTTGTTTTCTGTTAATCTCTTTCTAGTTTTTGGAGTAGTATTAAGCCCTTTCAATGATAGATTGAAGTAATGATCAACAATTTAACAACGTTCTATCCAATTCAGTATAGTTTTTTGTTTCTAATTTTCTATTTTCTAGAAAATGAAAATATGGAATCCACAAAAAGTACTTTTCAGTTTTTAGTTTTTTGTTGTCAGTTTTCAGAATCAGCATGTTTTACTATAGGTATGACTATTTTTTAGTTCATGATTCAATTTATTTCTTAAGAATTTCAAAATAAAAAAACTTAAAACTAACCGTGATGTTGAACCAACCTTGAATTAGCTAAATTTCTACAAAGAAGTTTTTGTATATGCATGATAAGAGTGAGTATAAGATGAAGAAAGCAGAACAAATTTCGCGTCAAACCCAATGCATTAGCTTCCCCAACCACAAAACAAGGGAAGTTAAAATGAAACTTTAATTAGTTACATGTGGTTTGATCATATATCTCCCTACACCAAGTTCTCTGCTCTATTAACAAGTGCTTTCTCTCCGTCTCTCTCTCTCTCTCTCGTTCTCTCCCTTGTACTTATCTCTCAAGATCGAAGTTACATTTCGAAATGTAATCTAACTGTCTCTTGTCAATGGCGAGATGTTGGACTTCTTAAGCCACCCAAGGTCTCTAGATAGGATACCTTCTTAGGAATTGAAATGTTTGCGAGTTTTTCAACTTTTAAGTCGCATGTGTCTTTTAGTTCCTCATTTCCGACTCCCTCCTTTGCTCTCATCAAATCTGCTTCCCCGTTATCCATAGTCCATCCCATGAAATCCGAGAGGGTCATAGATGGAGGTGTTCCTACTGCGTTTAGTTTCTCTATCTCTTCATCTGCATTCGGGAATTTTGTTGAAGTGATCTTCAGATCTGCTAAGGGATTCCTCTTCTTTTGTGCAAGAGATGGATTTTGAGCAAGAGAATCAGCATAAAGAACATCTTCAATGCGTGATAATACTGTGTGTGCCAAACTCTCTAGGATTCTTGAGTAGCTCTCTAGAAGTGCATGACCCACATCCTGCAATGCCATAACATAAACATTCCAT

mRNA sequence

ATAAAAGATATTACTCCTAATTTCACAAGTTTTTAACCCAAATCAAGGAGAATCAAAATAGATAGGCTTATCCAACTCAAAATCCAAGTGTCACACTCTGGTAGGAGTTCCACATCTATCCCATGAACACCACCAATGCCACGTGGACAACTTAGATTCATTCTGTTCCACAAAAACTTAAACATTGGCTATATACCAATTTGCCAAATTTGAAACATATCAAAAGAAAATCTTCACTTGGAACAAACACACACACACACCCAAATAATGGCCTCTCTAGCAACCTTAGCTGCCGTCCAGCCCACCACCCTTAAGGGCCTTGCTGGAAGCTCCGTCGCCGGCACTAAGCTCCACATCAAGCCCGCCCGCCAGAGCTTCAAGCTCAACAACGTCAGGAGTGGTGCAATTGTAGCCAAGTATGGTGACAAGAGTGTTTACTTTGATTTGGAAGATATAGCAAACACCACTGGTCAATGGGATGTCTATGGATCAGATGCACCTTCACCTTACAACTCTCTTCAGAGCAAATTCTTTGAGACATTTGCTGCTCCATTCACAAAGAGAGGATTGTTGCTCAAGTTCTTGATATTGGGAGGTGGTTCTTTGCTCACATACGTCAGTGCCAATGCTCCTCAAGATGTTCTACCTATCACCAGAGGTCCACAACAACCTCCTAAGCTTGGACCTCGTGGGAAGATCTAAACAATCTTTTTTTATTTCTCAATGTAATATTATTCATTGTAAAACTCAAAATCATCTTTAATTGAAATGTACAATTTTAAGAACACTTGTTTTCTGTTAATCTCTTTCTAGTTTTTGGAGTAGTATTAAGCCCTTTCAATGATAGATTGAAGTAATGATCAACAATTTAACAACGTTCTATCCAATTCAGTATAGTTTTTTGTTTCTAATTTTCTATTTTCTAGAAAATGAAAATATGGAATCCACAAAAAGTACTTTTCAGTTTTTAGTTTTTTGTTGTCAGTTTTCAGAATCAGCATGTTTTACTATAGGTATGACTATTTTTTAGTTCATGATTCAATTTATTTCTTAAGAATTTCAAAATAAAAAAACTTAAAACTAACCGTGATGTTGAACCAACCTTGAATTAGCTAAATTTCTACAAAGAAGTTTTTGTATATGCATGATAAGAGTGAGTATAAGATGAAGAAAGCAGAACAAATTTCGCGTCAAACCCAATGCATTAGCTTCCCCAACCACAAAACAAGGGAAGTTAAAATGAAACTTTAATTAGTTACATGTGGTTTGATCATATATCTCCCTACACCAAGTTCTCTGCTCTATTAACAAGTGCTTTCTCTCCGTCTCTCTCTCTCTCTCTCGTTCTCTCCCTTGTACTTATCTCTCAAGATCGAAGTTACATTTCGAAATGTAATCTAACTGTCTCTTGTCAATGGCGAGATGTTGGACTTCTTAAGCCACCCAAGGTCTCTAGATAGGATACCTTCTTAGGAATTGAAATGTTTGCGAGTTTTTCAACTTTTAAGTCGCATGTGTCTTTTAGTTCCTCATTTCCGACTCCCTCCTTTGCTCTCATCAAATCTGCTTCCCCGTTATCCATAGTCCATCCCATGAAATCCGAGAGGGTCATAGATGGAGGTGTTCCTACTGCGTTTAGTTTCTCTATCTCTTCATCTGCATTCGGGAATTTTGTTGAAGTGATCTTCAGATCTGCTAAGGGATTCCTCTTCTTTTGTGCAAGAGATGGATTTTGAGCAAGAGAATCAGCATAAAGAACATCTTCAATGCGTGATAATACTGTGTGTGCCAAACTCTCTAGGATTCTTGAGTAGCTCTCTAGAAGTGCATGACCCACATCCTGCAATGCCATAACATAAACATTCCAT

Coding sequence (CDS)

ATGGCCTCTCTAGCAACCTTAGCTGCCGTCCAGCCCACCACCCTTAAGGGCCTTGCTGGAAGCTCCGTCGCCGGCACTAAGCTCCACATCAAGCCCGCCCGCCAGAGCTTCAAGCTCAACAACGTCAGGAGTGGTGCAATTGTAGCCAAGTATGGTGACAAGAGTGTTTACTTTGATTTGGAAGATATAGCAAACACCACTGGTCAATGGGATGTCTATGGATCAGATGCACCTTCACCTTACAACTCTCTTCAGAGCAAATTCTTTGAGACATTTGCTGCTCCATTCACAAAGAGAGGATTGTTGCTCAAGTTCTTGATATTGGGAGGTGGTTCTTTGCTCACATACGTCAGTGCCAATGCTCCTCAAGATGTTCTACCTATCACCAGAGGTCCACAACAACCTCCTAAGCTTGGACCTCGTGGGAAGATCTAA

Protein sequence

MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDLEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSANAPQDVLPITRGPQQPPKLGPRGKI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23141.1Spo23141.1mRNA


Homology
[Close]
BLAST of Spo23141.1 vs. NCBI nr
Match: gi|131199|sp|P22179.1|PSAH_SPIOL (RecName: Full=Photosystem I reaction center subunit VI, chloroplastic; Short=PSI-H; AltName: Full=Light-harvesting complex I 11 kDa protein; Flags: Precursor)

HSP 1 Score: 283.9 bits (725), Expect = 1.600e-73
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
           MASLATLAAVQPTTLKGLAGSS+AGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPTTLKGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60

Query: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
           EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN
Sbjct: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120

Query: 121 APQDVLPITRGPQQPPKLGPRGKI 145
           APQDVLPITRGPQQPPKLGPRGKI
Sbjct: 121 APQDVLPITRGPQQPPKLGPRGKI 144
[Close]
BLAST of Spo23141.1 vs. NCBI nr
Match: gi|731359536|ref|XP_010691337.1| (PREDICTED: photosystem I reaction center subunit VI, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 268.5 bits (685), Expect = 6.900e-69
Identity = 133/144 (92.36%), Postives = 138/144 (95.83%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
           MASLATLAAVQPTT+KGLAGSS+ GTKLHI+PA QSFKLN  R GA+VAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPTTIKGLAGSSITGTKLHIRPANQSFKLNKSRCGAVVAKYGDKSVYFDL 60

Query: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
           +DIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN
Sbjct: 61  DDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120

Query: 121 APQDVLPITRGPQQPPKLGPRGKI 145
           AP DVLPITRGPQQPPKLGPRGKI
Sbjct: 121 APSDVLPITRGPQQPPKLGPRGKI 144
[Close]
BLAST of Spo23141.1 vs. NCBI nr
Match: gi|469608490|gb|AGH61311.1| (PsaH (chloroplast) [Suaeda salsa])

HSP 1 Score: 261.9 bits (668), Expect = 6.500e-67
Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNV-RSGAIVAKYGDKSVYFD 60
           MASLAT AAVQPTT+KGLAGSS+ GTKLHIKP+RQS KLNN  RSGA+VAKYGDKSVYFD
Sbjct: 1   MASLATFAAVQPTTIKGLAGSSITGTKLHIKPSRQSVKLNNSSRSGAVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           LEDI NTTGQWDVYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA
Sbjct: 61  LEDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
            APQDVLPIT+GPQQPPKLGPRGKI
Sbjct: 121 TAPQDVLPITKGPQQPPKLGPRGKI 145
[Close]
BLAST of Spo23141.1 vs. NCBI nr
Match: gi|15218186|ref|NP_175633.1| (photosystem I reaction center subunit H-2 [Arabidopsis thaliana])

HSP 1 Score: 238.8 bits (608), Expect = 5.900e-60
Identity = 119/145 (82.07%), Postives = 131/145 (90.34%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTT-LKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFD 60
           MAS AT+AAVQP+  +KGL GSS+AG KL IKP+RQSFK  + R+GA+VAKYGDKSVYFD
Sbjct: 1   MASFATIAAVQPSAAVKGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           LED+ NTTGQWDVYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA
Sbjct: 61  LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
           N+  DVLPI RGPQ+PPKLGPRGK+
Sbjct: 121 NSTGDVLPIKRGPQEPPKLGPRGKL 145
[Close]
BLAST of Spo23141.1 vs. NCBI nr
Match: gi|920701289|gb|KOM44514.1| (hypothetical protein LR48_Vigan05g211900 [Vigna angularis])

HSP 1 Score: 238.4 bits (607), Expect = 7.600e-60
Identity = 117/144 (81.25%), Postives = 130/144 (90.28%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
           MASLA+LA VQP+TLKGLAGSS+AGTKL +KP+++SF+  N RSGA+VAKYGDKSVYFDL
Sbjct: 1   MASLASLAVVQPSTLKGLAGSSLAGTKLSLKPSQKSFRAKNFRSGAVVAKYGDKSVYFDL 60

Query: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
           ED+ NTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGS LTY SA 
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLTYFSAT 120

Query: 121 APQDVLPITRGPQQPPKLGPRGKI 145
           A  D+LPI +GPQ PPKLGPRGKI
Sbjct: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
[Close]
BLAST of Spo23141.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPP9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_042530 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.100e-73
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
           MASLATLAAVQPTTLKGLAGSS+AGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPTTLKGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60

Query: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
           EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN
Sbjct: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120

Query: 121 APQDVLPITRGPQQPPKLGPRGKI 145
           APQDVLPITRGPQQPPKLGPRGKI
Sbjct: 121 APQDVLPITRGPQQPPKLGPRGKI 144
[Close]
BLAST of Spo23141.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLA0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g221000 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.800e-69
Identity = 133/144 (92.36%), Postives = 138/144 (95.83%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
           MASLATLAAVQPTT+KGLAGSS+ GTKLHI+PA QSFKLN  R GA+VAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPTTIKGLAGSSITGTKLHIRPANQSFKLNKSRCGAVVAKYGDKSVYFDL 60

Query: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
           +DIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN
Sbjct: 61  DDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120

Query: 121 APQDVLPITRGPQQPPKLGPRGKI 145
           AP DVLPITRGPQQPPKLGPRGKI
Sbjct: 121 APSDVLPITRGPQQPPKLGPRGKI 144
[Close]
BLAST of Spo23141.1 vs. UniProtKB/TrEMBL
Match: W5FMM1_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.800e-69
Identity = 133/144 (92.36%), Postives = 138/144 (95.83%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
           MASLATLAAVQPTT+KGLAGSS+ GTKLHI+PA QSFKLN  R GA+VAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPTTIKGLAGSSITGTKLHIRPANQSFKLNKSRCGAVVAKYGDKSVYFDL 60

Query: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
           +DIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN
Sbjct: 61  DDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120

Query: 121 APQDVLPITRGPQQPPKLGPRGKI 145
           AP DVLPITRGPQQPPKLGPRGKI
Sbjct: 121 APSDVLPITRGPQQPPKLGPRGKI 144
[Close]
BLAST of Spo23141.1 vs. UniProtKB/TrEMBL
Match: M4TE15_SUASA (PsaH OS=Suaeda salsa PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.500e-67
Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNV-RSGAIVAKYGDKSVYFD 60
           MASLAT AAVQPTT+KGLAGSS+ GTKLHIKP+RQS KLNN  RSGA+VAKYGDKSVYFD
Sbjct: 1   MASLATFAAVQPTTIKGLAGSSITGTKLHIKPSRQSVKLNNSSRSGAVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           LEDI NTTGQWDVYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA
Sbjct: 61  LEDIGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
            APQDVLPIT+GPQQPPKLGPRGKI
Sbjct: 121 TAPQDVLPITKGPQQPPKLGPRGKI 145
[Close]
BLAST of Spo23141.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UPR6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g211900 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 5.300e-60
Identity = 117/144 (81.25%), Postives = 130/144 (90.28%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
           MASLA+LA VQP+TLKGLAGSS+AGTKL +KP+++SF+  N RSGA+VAKYGDKSVYFDL
Sbjct: 1   MASLASLAVVQPSTLKGLAGSSLAGTKLSLKPSQKSFRAKNFRSGAVVAKYGDKSVYFDL 60

Query: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
           ED+ NTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGS LTY SA 
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLTYFSAT 120

Query: 121 APQDVLPITRGPQQPPKLGPRGKI 145
           A  D+LPI +GPQ PPKLGPRGKI
Sbjct: 121 ASGDILPIKKGPQLPPKLGPRGKI 144
[Close]
BLAST of Spo23141.1 vs. ExPASy Swiss-Prot
Match: PSAH_SPIOL (Photosystem I reaction center subunit VI, chloroplastic OS=Spinacia oleracea GN=PSAH PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 9.900e-76
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60
           MASLATLAAVQPTTLKGLAGSS+AGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPTTLKGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDL 60

Query: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120
           EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN
Sbjct: 61  EDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSAN 120

Query: 121 APQDVLPITRGPQQPPKLGPRGKI 145
           APQDVLPITRGPQQPPKLGPRGKI
Sbjct: 121 APQDVLPITRGPQQPPKLGPRGKI 144
[Close]
BLAST of Spo23141.1 vs. ExPASy Swiss-Prot
Match: PSAH2_ARATH (Photosystem I reaction center subunit VI-2, chloroplastic OS=Arabidopsis thaliana GN=PSAH2 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.700e-62
Identity = 119/145 (82.07%), Postives = 131/145 (90.34%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTT-LKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFD 60
           MAS AT+AAVQP+  +KGL GSS+AG KL IKP+RQSFK  + R+GA+VAKYGDKSVYFD
Sbjct: 1   MASFATIAAVQPSAAVKGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           LED+ NTTGQWDVYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA
Sbjct: 61  LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
           N+  DVLPI RGPQ+PPKLGPRGK+
Sbjct: 121 NSTGDVLPIKRGPQEPPKLGPRGKL 145
[Close]
BLAST of Spo23141.1 vs. ExPASy Swiss-Prot
Match: PSAH_BRACM (Photosystem I reaction center subunit VI, chloroplastic OS=Brassica campestris GN=PSAH PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.300e-59
Identity = 115/145 (79.31%), Postives = 129/145 (88.97%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQP-TTLKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFD 60
           MAS AT+AAVQP + +KGL GSS+ G KL IKP+RQSFK  + R+GA+VAKYGDKSVYFD
Sbjct: 1   MASFATIAAVQPYSAVKGLGGSSLTGAKLFIKPSRQSFKPKSTRAGAVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           LED+ NTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA
Sbjct: 61  LEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
           ++  DVLPI RGPQ+ PKLGPRGK+
Sbjct: 121 SSTGDVLPIKRGPQEKPKLGPRGKL 145
[Close]
BLAST of Spo23141.1 vs. ExPASy Swiss-Prot
Match: PSAH1_ARATH (Photosystem I reaction center subunit VI-1, chloroplastic OS=Arabidopsis thaliana GN=PSAH1 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.800e-59
Identity = 114/145 (78.62%), Postives = 129/145 (88.97%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTT-LKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFD 60
           MASLAT+AAV+P+  +KGL GSS+AG KL IKP+R SFK  ++R+  +VAKYGDKSVYFD
Sbjct: 1   MASLATVAAVKPSAAIKGLGGSSLAGAKLSIKPSRLSFKPKSIRANGVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           LED+ NTTGQWDVYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA
Sbjct: 61  LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
            +  +VLPI RGPQ+PPKLGPRGK+
Sbjct: 121 TSTGEVLPIKRGPQEPPKLGPRGKL 145
[Close]
BLAST of Spo23141.1 vs. ExPASy Swiss-Prot
Match: PSAH_MAIZE (Photosystem I reaction center subunit VI, chloroplastic OS=Zea mays GN=PSAH PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.900e-51
Identity = 103/145 (71.03%), Postives = 124/145 (85.52%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTTLKGLAGSSVAGTKLHI-KPARQSFKLNNVRSGAIVAKYGDKSVYFD 60
           MASLA ++ V+P  +KGLAGSS++G KL + +P+ +S +    R+ A+VAKYGDKSVYFD
Sbjct: 1   MASLAAVS-VKPVAIKGLAGSSISGRKLAVARPSARSIR--RPRAAAVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           L+DI NTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFL+LGGGSLL YVSA
Sbjct: 61  LDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
           +A  D+LPI +GPQ+PP+ GPRGKI
Sbjct: 121 SASPDLLPIKKGPQEPPQPGPRGKI 142
[Close]
BLAST of Spo23141.1 vs. TAIR (Arabidopsis)
Match: AT1G52230.1 (photosystem I subunit H2)

HSP 1 Score: 238.8 bits (608), Expect = 2.100e-63
Identity = 119/145 (82.07%), Postives = 131/145 (90.34%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTT-LKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFD 60
           MAS AT+AAVQP+  +KGL GSS+AG KL IKP+RQSFK  + R+GA+VAKYGDKSVYFD
Sbjct: 1   MASFATIAAVQPSAAVKGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           LED+ NTTGQWDVYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA
Sbjct: 61  LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
           N+  DVLPI RGPQ+PPKLGPRGK+
Sbjct: 121 NSTGDVLPIKRGPQEPPKLGPRGKL 145
[Close]
BLAST of Spo23141.1 vs. TAIR (Arabidopsis)
Match: AT3G16140.1 (photosystem I subunit H-1)

HSP 1 Score: 228.8 bits (582), Expect = 2.100e-60
Identity = 114/145 (78.62%), Postives = 129/145 (88.97%), Query Frame = 1 

		  

Query: 1   MASLATLAAVQPTT-LKGLAGSSVAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFD 60
           MASLAT+AAV+P+  +KGL GSS+AG KL IKP+R SFK  ++R+  +VAKYGDKSVYFD
Sbjct: 1   MASLATVAAVKPSAAIKGLGGSSLAGAKLSIKPSRLSFKPKSIRANGVVAKYGDKSVYFD 60

Query: 61  LEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120
           LED+ NTTGQWDVYGSDAPSPYN LQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA
Sbjct: 61  LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSA 120

Query: 121 NAPQDVLPITRGPQQPPKLGPRGKI 145
            +  +VLPI RGPQ+PPKLGPRGK+
Sbjct: 121 TSTGEVLPIKRGPQEPPKLGPRGKL 145
The following BLAST results are available for this feature:
BLAST of Spo23141.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|131199|sp|P22179.1|PSAH_SPIOL1.6e-7399.3RecName: Full=Photosystem I re... [more]
gi|731359536|ref|XP_010691337.1|6.9e-6992.3PREDICTED: photosystem I react... [more]
gi|469608490|gb|AGH61311.1|6.5e-6791.0PsaH (chloroplast) [Suaeda sal... [more]
gi|15218186|ref|NP_175633.1|5.9e-6082.0photosystem I reaction center ... [more]
gi|920701289|gb|KOM44514.1|7.6e-6081.2hypothetical protein LR48_Viga... [more]
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BLAST of Spo23141.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RPP9_SPIOL1.1e-7399.3Uncharacterized protein OS=Spi... [more]
A0A0J8BLA0_BETVU4.8e-6992.3Uncharacterized protein OS=Bet... [more]
W5FMM1_WHEAT4.8e-6992.3Uncharacterized protein OS=Tri... [more]
M4TE15_SUASA4.5e-6791.0PsaH OS=Suaeda salsa PE=2 SV=1[more]
A0A0L9UPR6_PHAAN5.3e-6081.2Uncharacterized protein OS=Pha... [more]
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BLAST of Spo23141.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PSAH_SPIOL9.9e-7699.3Photosystem I reaction center ... [more]
PSAH2_ARATH3.7e-6282.0Photosystem I reaction center ... [more]
PSAH_BRACM1.3e-5979.3Photosystem I reaction center ... [more]
PSAH1_ARATH3.8e-5978.6Photosystem I reaction center ... [more]
PSAH_MAIZE2.9e-5171.0Photosystem I reaction center ... [more]
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BLAST of Spo23141.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G52230.12.1e-6382.0photosystem I subunit H2[more]
AT3G16140.12.1e-6078.6photosystem I subunit H-1[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004928Photosystem I PsaH, reaction centre subunit VIPFAMPF03244PSI_PsaHcoord: 7..144
score: 1.9
NoneNo IPR availablePANTHERPTHR34787FAMILY NOT NAMEDcoord: 2..144
score: 1.7
NoneNo IPR availablePANTHERPTHR34787:SF1PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-1, CHLOROPLASTIC-RELATEDcoord: 2..144
score: 1.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0055070 copper ion homeostasis
biological_process GO:0008152 metabolic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0015979 photosynthesis
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0009932 cell tip growth
biological_process GO:0071555 cell wall organization
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0017148 negative regulation of translation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009987 cellular process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009780 photosynthetic NADP+ reduction
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009657 plastid organization
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009735 response to cytokinin
biological_process GO:0006364 rRNA processing
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0010218 response to far red light
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0042550 photosystem I stabilization
biological_process GO:0050821 protein stabilization
biological_process GO:0048767 root hair elongation
biological_process GO:0009744 response to sucrose
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0010114 response to red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0009637 response to blue light
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0005737 cytoplasm
cellular_component GO:0012505 endomembrane system
cellular_component GO:0044428 nuclear part
cellular_component GO:0009295 nucleoid
cellular_component GO:0009523 photosystem II
cellular_component GO:0009522 photosystem I
cellular_component GO:0030093 chloroplast photosystem I
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009538 photosystem I reaction center
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression