Spo23076 (gene)

Overview
NameSpo23076
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_143 : 1181422 .. 1183878 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTCATTATCATGTGCTAAATCGGCCAAAAACTCTAAATTTTGTTTCCTACGATTGGTTTCTTGTGTCATTTTCTTCTTCTTCTTCTTTGTTGTTACTAGTCTAATAGTCTTGATCTAATTTTTGGGTATTTTCTAAGTGATTCTCCCTTCTGTTGGAGTTTTATACATCTATGTTAGAAGGATCTAAAATTGATGCATGCTCATCAGAGGAGCTGGTGTAAAATGTCTTTGGATTTTTTCCTTTTCAATCTTTCCGTGGTTTGTTTTGGTAAGGGTTAGAAAACAATTTTTTGACGATAATTTCAATGGTGGTTAAGAAGTAACCAAGAGTTTTGTTATGTTGGTTTTTATATATGGAGAAAATGGAGTAGAGTTGATCAAAGTCAACTCGGCGCACTGGCCTGGCCCGAAAAATCACCGGGTTTGGCATTAACTTTAGGCCCGACTATGTGCCCAGACCGCCTCAAGTTTTTAGTTTTGAACATCCCAGAATTGAAGTTTGGTTGTAAACTTGGCATGACCTAAAAAAACATCTTATGTGGCCCAAATATTGGGTTTTGGTGTGAAATTTTCGGCCCAAAATAGAACGTTTTTTGACAAGGTCCGACCCGACCCAGGTCTAGAATGGAGGAGTGAAAACGGAGTGCAAATAGAAGAAAACACCATCACTTAGTAGGCATGATTAGTGTCGGAAAATAAGTTAAAGTTGTTTCTCACAATAAAAAAATATAGTTTAAGGTTCAAGCTGTTAGAAAGTATAAAAGGTGTTCTTGGCAAAATAAAAAATGCTATGTAATTTTATTTTACAAGTTCTCTAATATATTTATAGTACTCTCTAAACCAAATTTGAATATTGAAATTAAGAAACCTCTAACATAGTTATTCACTCCTACAAATTCTCCAACAATCCACAAACTAACATGTAAAGAATTAAGAATTACAAGGGTTAAAAAATGTGTATAAGTGGTAAACTATTGTAACGAGATAATCAAGTTTTCCAAATGAATAGGTTGTTTGTCGCTAAAAACAAAAAATGAATAGGTCGTTTTCATGCATCGTTATAAAGAAGCAAATTGCACGACAAATTAACTAGCTAGCCGCGGAGTTGATCAAACCCCATGTTCCCACGATTCATATACTAAGTATTACTTTAATTTTTGAACGAAATAAAATTCAAATTTAAATCATAAAATTTGAATCTATGATATTTACAAAAGAAATCGATGTAGACATCATATGATTACTGCATATAATCTTATGTTTTTCTTATTATATTTGGCATGACTATTAGTGAACTAATACTTCATATATTACCCTCCGTTCTTAAATACTTTAAACAATTTGACTTTTACAATATTCATAAATTAATTTTGACTAACTTTTTTTTAATAATAATACTTCATAAAAATCAAATGTTATTGTGTAAAATATTGTTGGATTAGTCTTAATGAAATTTTTTGAGATATCAATATTTTTTACTCCACCCGTCCCTTAATACTCGTACCGTTTTAACTGGACACGCTTGCCAATGCACTACTTTGACCACCAATATCTTTACCTACATGTTATAAAAACTTATGGAAATATTAATATTTTGAAAATTTATATTAATATGAAGCTAACAATATATTATATACGAACATTTATTTTCATATGCTATAAATAAAGTAGGGTCAAAGTGAATTATGTGAATAGTGCAAAAAATCAAAACAGTGCGAGTACTAAGGGACAGATGGAGTAAGTTTTTATTAATATTATTTTTTGGTGTACCACCGGTTCACGTTTAGGGTTAATCCGAATTCAATGCGAGTTCTGAGTGGATAACTTCCAGTCCCCTCTAAATTATTGTTGCGGGGGATCGAACACGATCCTACCAAGTTCAGCCTCAATCATCACTGACCAACATACAATTGATAGTTTTTATTAATATGTTTTTTTTTTTGTTCTACTACGAGGAGTTCCCACCGCCTTCGGCGAGTGGACTAATCTCCAGCGGGAGTTTGCATGGGTACCTCGATGGGCAGCATCCCTCCCAGTTGAGATTTTTTCCATTCCCAAGGCTCGAACCCGAGACCTTGGTTAAGGAGCTAGAGGCCATTAACCACTCATGCCAATCTCAATTGGTAGTTTTTATTAATATGTAATCGCATATAATTACTGTCAAACTAGTATTTTATCGAGTGTGTCGGTGAAACTGTTACCGGTATTCGATGGGAGAAATTGCTTTATTTTATACACCTGGCAAGGGAAAAAGCAGCCGTGCACAGCAGTTCATTCGCACAAAGCTCCCGGCCTTCACACGTTCTCTCGTATAAACACTGCACAACCACATAGCCCACTACTTTTTCTGAATCGTCTCTCCCAAAAAAAATCCCCCAATTTTTGCATTTCCATCATCGACGATTTCCCGGAAATCTCTGTTTTCCGATTTATTCTCTCTCATCGCACGTAA

mRNA sequence

ATGTGTTCATTATCATGTGCTAAATCGGCCAAAAACTCTAAATTTTGTTTCCTACGATTGCAGCCGTGCACAGCAGTTCATTCGCACAAAGCTCCCGGCCTTCACACGTTCTCTCGTATAAACACTGCACAACCACATAGCCCACTACTTTTTCTGAATCGTCTCTCCCAAAAAAAATCCCCCAATTTTTGCATTTCCATCATCGACGATTTCCCGGAAATCTCTGTTTTCCGATTTATTCTCTCTCATCGCACGTAA

Coding sequence (CDS)

ATGTGTTCATTATCATGTGCTAAATCGGCCAAAAACTCTAAATTTTGTTTCCTACGATTGCAGCCGTGCACAGCAGTTCATTCGCACAAAGCTCCCGGCCTTCACACGTTCTCTCGTATAAACACTGCACAACCACATAGCCCACTACTTTTTCTGAATCGTCTCTCCCAAAAAAAATCCCCCAATTTTTGCATTTCCATCATCGACGATTTCCCGGAAATCTCTGTTTTCCGATTTATTCTCTCTCATCGCACGTAA

Protein sequence

MCSLSCAKSAKNSKFCFLRLQPCTAVHSHKAPGLHTFSRINTAQPHSPLLFLNRLSQKKSPNFCISIIDDFPEISVFRFILSHRT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23076.1Spo23076.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo23076.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23076.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23076.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23076.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016556 mRNA modification
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0009744 response to sucrose
biological_process GO:0006364 rRNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009637 response to blue light
biological_process GO:0006464 cellular protein modification process
biological_process GO:0030091 protein repair
biological_process GO:0006979 response to oxidative stress
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0010218 response to far red light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009657 plastid organization
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0010286 heat acclimation
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0007017 microtubule-based process
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0030154 cell differentiation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0010206 photosystem II repair
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006621 protein retention in ER lumen
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0017148 negative regulation of translation
biological_process GO:0048481 plant ovule development
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006417 regulation of translation
biological_process GO:0009617 response to bacterium
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0009910 negative regulation of flower development
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009058 biosynthetic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0006750 glutathione biosynthetic process
biological_process GO:0009723 response to ethylene
biological_process GO:0009407 toxin catabolic process
biological_process GO:0042026 protein refolding
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0009414 response to water deprivation
biological_process GO:0009556 microsporogenesis
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0052543 callose deposition in cell wall
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0010076 maintenance of floral meristem identity
biological_process GO:0000165 MAPK cascade
biological_process GO:0045017 glycerolipid biosynthetic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0006412 translation
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006753 nucleoside phosphate metabolic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009555 pollen development
biological_process GO:0015979 photosynthesis
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009658 chloroplast organization
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0006605 protein targeting
biological_process GO:0009306 protein secretion
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0019432 triglyceride biosynthetic process
biological_process GO:0009735 response to cytokinin
biological_process GO:0015671 oxygen transport
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0006457 protein folding
biological_process GO:0043090 amino acid import
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0042908 xenobiotic transport
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0007165 signal transduction
biological_process GO:0009651 response to salt stress
biological_process GO:0008152 metabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005829 cytosol
cellular_component GO:0005737 cytoplasm
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009523 photosystem II
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0009507 chloroplast
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0044464 cell part
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009536 plastid
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005875 microtubule associated complex
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005840 ribosome
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0020037 heme binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0000900 translation repressor activity, mRNA regulatory element binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0046923 ER retention sequence binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004144 diacylglycerol O-acyltransferase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
molecular_function GO:0004081 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity
molecular_function GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity
molecular_function GO:0008430 selenium binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0005344 oxygen carrier activity
molecular_function GO:0019825 oxygen binding
molecular_function GO:0043295 glutathione binding
molecular_function GO:0004363 glutathione synthase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0051087 chaperone binding
molecular_function GO:0003993 acid phosphatase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo006670.75Barchart | Table
Spo169960.73Barchart | Table
Spo108350.73Barchart | Table
Spo192880.73Barchart | Table
Spo199380.73Barchart | Table
Spo069530.72Barchart | Table
Spo251960.72Barchart | Table
Spo026960.72Barchart | Table
Spo224510.71Barchart | Table
Spo233270.71Barchart | Table
Spo212150.71Barchart | Table
Spo157020.71Barchart | Table
Spo010540.71Barchart | Table
Spo084070.71Barchart | Table
Spo266970.71Barchart | Table
Spo149140.70Barchart | Table
Spo089350.70Barchart | Table
Spo097980.69Barchart | Table
Spo012520.69Barchart | Table
Spo115240.69Barchart | Table
Spo116880.69Barchart | Table
Spo233820.69Barchart | Table
Spo002050.69Barchart | Table
Spo201060.69Barchart | Table
Spo062780.69Barchart | Table
Spo083510.69Barchart | Table
Spo092320.69Barchart | Table
Spo093350.69Barchart | Table
Spo250080.69Barchart | Table
Spo100920.69Barchart | Table
Spo211440.68Barchart | Table
Spo026650.68Barchart | Table
Spo033620.68Barchart | Table
Spo056430.68Barchart | Table
Spo095540.68Barchart | Table
Spo097690.68Barchart | Table
Spo108640.68Barchart | Table
Spo129650.68Barchart | Table
Spo154610.68Barchart | Table
Spo162130.68Barchart | Table
Spo180800.68Barchart | Table
Spo211550.68Barchart | Table
Spo238000.68Barchart | Table
Spo102840.67Barchart | Table
Spo175780.67Barchart | Table
Spo002560.67Barchart | Table
Spo213830.67Barchart | Table
Spo029180.67Barchart | Table
Spo228110.67Barchart | Table
Spo025730.67Barchart | Table
Spo016280.67Barchart | Table
Spo240460.67Barchart | Table
Spo046530.66Barchart | Table
Spo153170.66Barchart | Table
Spo158430.66Barchart | Table
Spo008720.66Barchart | Table
Spo059150.66Barchart | Table
Spo002140.66Barchart | Table
Spo246750.66Barchart | Table
Spo052650.66Barchart | Table
Spo051250.66Barchart | Table
Spo029320.66Barchart | Table
Spo212540.66Barchart | Table
Spo216360.66Barchart | Table
Spo244250.66Barchart | Table
Spo206480.65Barchart | Table
Spo039060.65Barchart | Table
Spo254030.65Barchart | Table
Spo162930.65Barchart | Table
Spo123020.65Barchart | Table
Spo123700.65Barchart | Table
Spo233320.65Barchart | Table
Spo128430.65Barchart | Table