Spo22969 (gene) | SpinachBase

Overview


Name	Spo22969
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Signal recognition particle 19 kDa protein
Location	SpoScf_01212 : 105185 .. 119273 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATGCTCCTGATAAATGTTGATCAAGTGTTTAAGGTACGTTTCCTTGTTTTTTCATCTAATGTTCTTTTCGGATTGTTATGTTCTTTTTCACAACTTTATTTTTACTGTGTCATCAACATAGTTTGTTCTTTTATATCAACGTACATAGATTGTTAAAAAAGAACATATAATGGTTTGAAAAGAACAAATAACACTTAAAAAAGAACATAGTCTGATTCGTGGTAAAAGAACAAATATACTTTTTTTAAAAAATATAGATTTAGTTTTAAGTGCATCAAAAAATCGTCGTTTTGTCTTTTTAATTAGAACATAAAATCGTTTGAATAGAACAAATAACACTTAATAAAAGAACATAGATCTTATGTGTGGGATAAAAACAAAAATACATTTAAATAAAAATATAGATCTAGTTTTAAGTGCATCAAAGTATCGTCGTTTTCGTCTTTTTAATTAGAACACTAATTGGTTTGATAAGAACAAATACAACTAATAAAAGAACATAGATTTGTTGTTCTTTTCGTCCCTTTCATTCTGTTCTTTTGTTTGATAAGGAAAAAGAAATATGATGTTCTTTTTTCACGTGTTCTGTTCTTTTTTCTTTTTTTATTGTGGTTTTTTTTTTTGAGTTTTTGTTATTTTATTTTTCTTCTAATTTTGTTCTTTGTGTTTTGTAAAAAAGTTGTTGTTCTTTTTTATAATTATTTTGTGTTCTTTTTAATTTTTTTACAGTTTTTTAATATTTAATAATATTATCGATAATATGTATTTTTTTTTTGTTTTTCTATTGCATTTTTCACACGATGTTCTTTTTGAAAAATAGTTGTTCTTTTTATAGTTATCAGGAGAGAGAATATGTTATTTTTATTTTTGTACATTTTCTTTAGTTTTTTGACATTAGTGTTCTTTTCAGGTTTAGTTAATGTTCTTTTTGTTTACTCTAGTTCTTTCTGTTTAGTTTTTTATGTTCTTTTTCGTTTTTTTGTTTTTTGCGTTTTCTTTTAATGTTTTTGCGTTTTGGTGCAGGTGCACGTAGATCTACGTGCAGGCCCCTGCACCATCCACGCGTTGGTATTTGGTTCAAACTTAGGCAAAAATAGGGGTATATTATGTGATTCAAAAGACGCGAGTGTATTTGGTGCATTCTTGCAAACTTAGAACACTCTCACGTCTGTCAGGTCAGAGTCATTTACTTTCTCTCTCATACCATAGCGATTCAACCGGAGTTCAAACTACATTCGCAAATGTCAGTAATCCTTTAACTAATCTAATGTCATCTGTTTATTATTCGAAATTTAATTATTGATTGTCAATCGAATGAATAAATATACTCATATCTGCATCATCAAATCTATATATTTCCTGAAATTTGATCGAATCAGGGTTTAATCTATCTATTTCCTCTAATGTGGTCGAATTAGGGTTTTAATAGAAGAAAAGATGAATGGCGAATTGCCCAATGTGAAGACGTGGGTGATATTATATCCAGTATACATCAATTCGAAGAAAACAATTGCCGAAGGCCGCCGAATTTGCACTACCAAAGCTTGCGAAAATCCTACTTGCGATGAAATTGGTGATTGCTGCAAATTTCTCAATCTTCCTTACCATAAAGAGGTTTGATTTTATTTGTAATTTTGATCGCCGTCTTCAATTTTGCTTTTAATTTCGTCTGAATTTTATATTGATTCCGTTAATTTCGTTGAATTTCTCAATGTCCCCTATCTTTAAAGAGGTTTTCAATTTGTAGGCTGAGAAGGCGTATCCAAGAGACTTTATGCAGAGAGGGAGGGTGAGAGTATTGCTAAAACAAGAAGATGGGAGTTTGTGTAATCCTGAGATTTCGTCGAGTAAGAATTTCTTCATTGTGCCTTTTTTTTGGTTGCTTATTGTGGTGCTGTGTAGCATGTGTTGCAATTTTTTGGAATTGGAATTTATTATATTTATTGGCCTCTTGTTTTGTTGAGACATCAATTGAGCAGACGAGCAGTTTTAAGGCTGTATGCTATTGATGGCCATGATGGGCACAATCTGCTGGGAAATTTTGTTGTCGGTATATGAATTCAATGACTTGATTTATCTAGGACTAGTTGAATTTTGGAAGGGGTGTGAGATTGATTGATTTGTCGGTATACACGATAATGGTGATTGTTCGTGTGAAACACTGAACTTATTTGAAGGATGGGTTTTGCAAGGACAGCTAGTGATCTATTGAGCCTGTGACTTCATGTGTAGATACATCTGACTTATAAGGGCTTAGCCATTTAGTCTCTTTTCAAGTTGATGTTTTTAGTTGGTAATATTAGTGGGTTTACTAGTACTTGTGAAGTTATGATTCCTCTATGAAGGACACATGTCTTGGTCTTGAACACACACTAGTCAAATGCGGCTACAGGCAATACTCATCATGATGCTGATGGGAAACATCTTCAACATCCCAGTAATATTTAGTCCAGATTGGGTTCAGGAAGATCTACAAGCACGCAAGACGCAACCTTACCCCAAAATAGTCAAAACTATTAGGGAGCCTGTTTCAAAAAGAGTAATTGAAAATATTTTAGAAGAACAAACTAATAACTAATAAAGGCTTAAAATTTGAAACATCTTCAGCAAAAAACCACAACAACAATATCAACGATAATAAACGCAACCACAATCTTGCTCGCAATCATATAGTATGTCAAGTCTAGTACGGCATGAATAGTAAGCACAAAATAAGGAGAAAGAATAAATAGGATTACCTACTAATCAACACCCCTGAATCTCCTCCAAGAACTTCAATAAATCAGATCCTTCCTTATTTTTGATCCAATCCTTAGGTCTACCCCTTGTCTTTCAATTACTATAAAGATCTTCTGGCACGGTGAGAGTAACATCTATTGAAGAAAAGATGTGATAGACAAGACTAAGATGGTTTGTGCATGTTAAATGAAGGCACCCAGTTATAAGGTGTGATCATCAAATGCATAATCTTTGTCTTTCCTATGAGTTTAAGCTCCCTTAATTAGCCAACGCTCTTCTTCGTAGAGAAGAATAGTTGGCCTAATTTCTGCCCGCAAAATTTCCTTTAGGAAATTTTGCAAAAACTCTTTGTGGCCATGCTCCAAGTACCTTGTCAAAGAGCACAATGTCCTCCTCCTCCTACCATTATTTTGAATAAGCAACCCGTAATTTTGGTAGTGATCTACTTTCAGATTTACCGCTGTTCAATTCTAATTTCAAGGTCTNAGCAACCCGTAATTTTGGTAGTGATCTACTTTCAGATTTACCGCTGTTCAATTCTAATTTCAAGGTCTGAATTTTCTCACCCTCCACAAAATTTATGCTTCTATATATATATATATATATATATATATATTTCATTTTACTCCACTTGAATTTGAAACCTTTTTATAAAANATATATATATATATATATATATATATATTTCATTTTACTCCACTTGAATTTGAAACCTTTTTATAAAAAAATTTCTCTAGAGTTCTAAATTATCATTGACATCTTCTTTGGTTCCATAATGATCAACCACTTTGTCACTTGCAAACAACATACACCAGGGTACATTCCGTTGTTTGTCTTAGTAAGCTTGTCCGTACGTATGGCGTAAAGGAATGAATTAAAAGTAGATTCTAGATGAAGCCCTATGTTTTTTGATACGAATGAGCCACAAGGGCAACACAAATTACAATGGGGAGAAGAGGGGATTCAAACTTGTGACCTATCGTATATAAGCCCTCAACCTTAACCACTAGGCCAAGAAATCATCGGTGAAGCCCTGTGTTAATAGCAATGGACTTGTGTCTCCACTTGATGTTCTCACTCTAGTCTTGATTATAAATTCATATCTTCAATAGCTTGAGTTATGCAATTTGAAGTCCCGTTTCTTTTGGAGACCTCCTTAGTATTTCCTTGGTAATCATTCATAGACTTATATATCTTTCCCAAAACAATTGAAATCATATGTAGACCCTTTCTGCCTATCTCCTTGTTACTCCATTGAGCATTTCCACACCTGTATAGCTGCCATTGCAGATCTTCCCGACATGAAAGAAAAAATGATTTTCCAAGATAACCATCTCTCTCCTTCGTCCTTATTTTCCTCTTGGTCACCCTTTCCCGTAATTTCATGGTAGGGTTGTGTATTTTCAACCCCTATAGTTGTACAAATTTGATTATCCCCTTTGTTCTACTAGCATCTTAGTGGACTTGAGGGTGGCATCAAGCAACTTTGTTAACCAAATAAAGCCCTTTCCACCTTAAACACTTCCATAATTCTTTAAGTATCTCGTTCAGCCCCACTGCTTTGCCAGTATCACTCGCTAACTCTCTTTAACTTTGCTGTTTGTAATACCCGGGCAGAGCTGTATTTTGGTTCTTCGTCAATGCATTGAGCTCTCTTACATATTCATTGTCACTAGAACCATTCAGCAGCTGTGAGAAGTACCTTTGTAGTCATTCCTTGATGTGATCATTTCCACAAGGACCCATTCTTCATCCTCAATACACCTCACTTGTTTGGTTGTTCCAAGCCTCAAAATTTAAGCTTCCTTATCCTTAGCTTCTGCCACTGCTCTCTTCGCCTTTTTGTTGGCCATCTTACATCTTTCCTTGTTTGAATGTTTCCCGCCTTTTTCTCTTCTTACCTAAGACCTCTTTATTAGTCATTGAGCTCCCCCTGATACTCCCAATTTTTTTTACTGCTGTTCTTTTATGAGTTTCAACTTTCTCCTGCATTTGGTGAAATTATATGGTATTGTAGGAAATTTCGAATGTCTGTTCCATCCTCAGTGCGACAGTTTTGTTTTAGATTCAACCTAGCACTAGATTCAGTGCTCCCGTTCCGCCATTCTGAGTGTGAGCCGGCTTAAGTTTGTTGGTGCCTGGGCTTTTGGCTAGTATGATTTATGGTTTTTACCTCTATTGGCAAACATCAAGCAACGCATTCGTTTTATGTTCTATATACCTGAATTCCATCTTATAGCACTGGGCAGAGAATAACTGATTTGTCAGATGAAGTTTGAAGGCACGTGTTTTGGTTCCAAATCAATAATCTTACTGTGAGCACTTCATGTGGATTCAAGAGCAAAGAATGAAGTTGTTGGGCGCTTAATAGCATCTGTATTCCGATTCCCTCTTATGCAGTTGTGAGTTATGACCAGCTTGACTTTTTGAGGTTGACATAGTCTTGAAGATAGGGGACCACAATTTTCTATTCTTGAGATTGGGAGTTTTGGGGTAGGCTTTTTGATACCACGTCGTATTTTTCCATGTTTATTCTTCTGTAATGCCTAATTTTCTGACGACTCCTTACTCCTTAGGCCAGAAGGCCAGATAAATCTCTCAAATATGCCAATGAAGCCCGTGGCGCTGATTTGTTGGTGGTTATTGATGTTGGACGTGTCACTAAAGCACATAGATGTTGATATTTTACTTTTATTTTTTCAAGAGGACCACATTAACTTTTTTCTTTTTTCTCAAAAGTACCCACATTTTGGTCTGTGTACCTTCTGCTAAATTTCAAACATAGATGTCCAGTAACCTTTTAGCCTCCATCAATTCGAGGTGTTGTTAGTATTAGATTAGGCTTTTAATCTACTCTTTACTACACCATGAACTAGTTGATGGTGATATCTTCTAACCAGTGATCAAAGAAAATCTCTCAACTAATGTAATACATTAATCTCTACACTCGTGCATGTTATGGCCTTAGGGTTGTTAAGAAATGTGTAACCGTGGCTAATCCGTAGACATATATTGCTCAAATAAAAATTTAAGAGAGAAAAACTGGCTCAGGACTCAAGGGAAATTCTAAAGGACCAAACGCTCGTCGTTGACAAAGGACCGCCTTGGTTACAGGAACAAGGTGGACGTGGAGCTTTGCATGTAGGAGATGGAATGAGATATGATTTTGGTTTGGTTTTTAGAGAGACTGTTGGTTGTGTGGGCATGTAAGGTTCAGTTAGGGTAGGATGAACTGAGGAAGAGGATAATTCTGGTGTATTTTTGTGGTGGAACCTTCTTTGTTTGATTGCCTATAATTGGGGTTATTTACATTTAAACAGCAACAAACTATCCAGTATAGATCTCAGCAACGAGAGGGCATTATATTCATTTCTTTGGGAGAAAAATAAATAAAGAAAGAGGTTATTTTTGTAGGATACTGTCTCTTATGTGTGTTGGTTTAGAATTATGTGCAGAAAACAAATGTAGATGAGAACAACAAAACGTATTTTAAAATTATTATTTGAAAGATTTTGTAAGTTGGAAAGATAATGGAAAGTATATAAATATGTAAGTGATCTATTTGAAAATATGTAAAGAGAAACCACCATTTAAAAGTGCAAATTTATGAGAAACCACCTTATAAAAGAATTCTTGTGAGAAGAGACCTGTTTCTAAATATGTTTTGTCGAAAACCACCTTATGTCGAAGTCCGAAATTTGGTTCTATTTTCCGGTGTTGACTACCCACGTGGGCCACAAGTGACCTACTACCCGCCTATTTCTTTCGTTTTCCTGTCATTTTTCCAATCCACTCTCATTCTACAACCCATCTTCTTCCCATCATTGCGTCCTCTAATATATAATGGTTGACTTCTAATCATCATTACTCCTTCAATCTTCCCTAACTGATTTTTGGATGGACAGAATCAAGATTTCCAGAATTGCAACTATGGCCACACATACTTGAAAGTTGCCTCTGCACTTTCTGTTATCAATTGCTAGCGACGGAAATTGACATTTTGGGGAGCGATATTTTGTTGAATAACTTGGGATTGACGGGAGATGAGTAAAAGCGAGAAGAAGATTTCACATAACTTCATCTTCATTGTTTTTTCTTAAACTTGAGTTTTCTCTCTTGTACCCACCAGTCAAACCACGAACGCAACAAGAAGCATAGAGGAGGGAAAATTTAGAGTGAAAATTAATTAATTATAATTAAATTAAGTTAAAATAAATTATAAATTAATGTAAATGGGACTTTAAATTAATTAACTGAATTGAAAAAAACGATGAAGATTGCATTTTTGTTCTGTCCCGGATTAGTTTTTGCACTTTCTGTTTTCATGTGTCCCAGATTAGTTTTTACACTTCTGTTTTTGGAAAGACTCCACAATTATTTTAATACCTATCTCTTCCCATTACCAAAAAGTTAGGATCTCACACTCTCTCACAAGCAATTAAAAAAATATTCAACTATCTTCTATCACATCTGTTTTTCAATAAAATAATACCCACTATCTCCTTTTACATCTACTTTTTCAATAAAATAATATTTGATAACCAAACAACAACGTATCTCCTAAAAATGTGTGCTTTGATAATTGTAAAAACTAATCTGAGAGTTTTTATTTGCATCTACATCATTATATGTGACCAGCTCTTTCACTTTTCTCCTCAGTTTTGTGGTTAATCGAAGTTTCTTGCAACACTTTTGAGGTTTGAGGAACTAATCCAAGTGTTGTTGTGTAGAATTGGGGAATAACAGAAAGCTACAGAGAAGTGAGAATGTAAAATGGAGGAAAAAGGGGGGAAAAGTAAAATAAATAAGTGGAAGAAGGGTCACGTGCGGCCCACGTGGGTGGGCAATGCCGGAAAGTGAAGTCAAACGCCGCAAACTGGCTTAAGTTGGTCGTTGACAAAATAAATTAGAAATAGGTTTCTTCTTACAAGATTTGTTTTATAAGGTGGTTTCTCACAAATCTGACATTTTAAAAGGTGGTTTTTGACAAATTTTCCTAAAGAGAAAGAAAGTAAAAGTTGGTTAATCTTATATAGTAATTTTGGAACAACAAAGTGAAAGAACAAAACTTATTTTGGATTCGTAAAAGAAAATAGTTCCATATATTTTATATTTACAACACTTCAAACGAGTAATTTGTTCCATATATTTTATGGCTATTTGGAGCAAGGTAAGGAAAAAAGAATGAGGGATGTTATTCTCTTTTGTTCTAATACTCATATGTGCAAATGTATGAGGCAAAATGATAGCTGACTGTGTTGTGAGAAAAAAGAACTCTGCCACCATGATATATTTTACTCTTTCATGCTTTATAGTTTATATTTCCTCCGATTCAAAATAGTTTGGAACACTTTGGTTTTTGCACTATTCACATAATATACTTTGTTTATTTTTTTAGGAAAAGTTGTTTTAAACAATCCAACCTTTCGACGATTTTCCGTTAATAATCCAACTTTTAGATTATTATCTAATAATCTAACATTTACATCCCATTAACTTTCAATGAACCTAAATGACTGGGAACATGCCAAGAAGGTCAACTTTAATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNAACCCCCCCCCCCCCTCTCTCCTCCCCCCCACCCTTCTCTGATCTCTCCTCTCACCCCCTCTAAGCCCCACCAAGAAACCACCACCAGTCCGCCACCATCAAATCAGCTATCATGGCACCTAATTCACCCAAAACCACAACTGAGAGGGTAATTAGAAGAGCATAAAGTCAAAGTTTTTCCATTTTGGGTCGATGATAAACCAAGGTTTTGAGCGGTATAGAAAAGGGTCTTTGAGGAAGAAAGAGAAAGATGAATATAAGCGTCGAAATCCAACTGGGAAGATGAATAGAAAAGTCAAAAATGGGTTGGGAATGATCCCTTTGGTTCTGTTTGTTTTGTTGTTTTTTTGGGAATTGTATATGACTTTCTAGATTAATTGAAGAAATTAGGGAAGAATGAGTAGATAATTTCTTGTAAACTTGTTTGGTTTGATCATGGTTGGTAAGTTGTGATCATGGCTGTGGAGAAAAGTGGACAAAACTATTCAATTTACATTAATTGAAGATTGACGACTACGATGATGATGATGTTGAGCTGGGATGATGAAATGAAGAGGATGGATCAGCAAATTAGGAATATGATGATGTAGGCCTCCATTTTTTCCGGCTAGGTAGAGAAAGAGGAAGGGTGGTTATAATGATGGTTAAATTTAAAAATATATTATAATTAATGGACTAATAACACACTGCCACGTAGCTTGGTAACCTGCTATATCGAGTTGGTGACTTGATGGGTTCAATAAAAATTAATGGGGTGCAAGGGTTGGATTATTAGATAATAATCTATAGGTTGGATTTATTAACGGAAAATCGTCGAAATATTGGATTATTAAAGTAATTTTTCCTAATTTTTTATGATCTATACTTTAGGAAAATATATTAATGTGGAATCTTGTTAGATTCGCCCTAATATATATTTTGCGAAAATCAATTTTTTATTAATCTTTACTTATCAATAATTAAGATATTAATTGTTCAAGTTATACATTGACAAGCGGGAAAAACAAAGTGTTGGAACTAAAAAGTAACGGAGGAAGTACTATGTATGTTAAGATGTTAACCTTATATCTTCTTTTGTTGTTACAACTTCAAGGACAACTTGTCCATTGTTCTTGTACTTCATTAAAAAAAAAAAAAAAATTCACAAAGACAGAAGATTTTTAACCTTATTCTAAGTTTTGCCGCATCACATATATCTCGTGTCACTGATGAAACATTTCCTTGGTTACTCTGTTTTTAACCCAAGTACCTAACTGTTCTTGGTCATCGTTTTTCATATAAGAAAATATAGTGTATTATCAGCTGAAAAAATTGAATATAGAGAAAGAGGACAAGCTTTTCTCATATCTAAATAATACCAGTTTCTTTGATCATCTTAATTGAATAACAAAGTAAAATAGTGCCCAGAGTTCGGTGTGAAGGTATTTTCTGAAGTCAAATGGTTTTCATGCAAGTTATTCCTACTAGTTGGAACAGTGCTTAATGTAATTAAGCATCAGGCGAGCTAGTGAAATGATATTACATTATTATATTATGAATTTCTTAGCAAGAGACATGCTATAGGTTTCTACATGTATTATTTAATGATGTAAGATTGTAAGATCTTCAGATAGTGGTTCTCTTTCGTCCTCTTTTTTTAATATTTACAATTACCTTGGGTAGCTTGGGAAGATGTTTGTTAGTGCTTTGTTTACAATTTATTTGACAACATGGAATCAAAACTCGGCCATTCTTACGTAACGGCCGTTCTATAATGGGTTTTGGATTTCCTGTTCGGTAAAACCCTGTTACGTAACGGAGCGACAAAAATCATGTCTTTCTCCCCGCGTCGTCCGTTATGTAACGGTGACTCGCCGCTTTAGACCTTTTTTTTCCCCGTTACACCGTTCTTTTACACAATTGACCAAAAATATTTTAGTAATTAGTTATATTGTTTATGAAACATGATATTTCGAGTGCTTATTTGTTCACAAAATATAATACTCACTCATAGATTTTGTTATATTGTGTTCATATAATACTTGTTAGAATTAAAATATAAAAAGAAGGCTTAGACATGCTAGTGTGAATTTTTGGAAAAAAATCACACCTCAACATCCGTTGTCCGTTCAATTCGTCCGTTACAAGCGATTTCCTCGCGTTACAGCGAACGCGACTGCGTCCGCGTTTTTTTTCTATGTTTGACAGTAGGATAGATAATCATTTCCATACATAAGATCAAGAATTATGTGAGTGTGAGCATGTATGTTACTCGGACTTGGGTTCTCATGTTTGACACGGGTATGTGTCCGAGTGTTTTAATCGGCTGCTTTTTTGAATTTTTTTTAATGATTTTGGCTCCAAATGAAGTGTCAAAATGATTTTGGCCCATGTCCGAGTGTCGAGAATCCGACATGGGTACTTGAGTTGAAATAAATAGTTTTGAGTAACATCGTTACTTTAAAAATAACTCGGTGTTAGAAGGCCTTTGAGGTTATAATCCAAGTTATTGGCAGTATAGTATGTTGGGTGCTAAGTCGTTGTTATTAGATGGTGTATTATGGAGGGTGGGCAATGGTAGTAATATTTTGGTCTGGAAGGACTTGTGGATCCCAGGAAGCAGTGTCATGTTATCTCCTCAACAAGGCCAAGTAGTTGACTTGGAAATGTGTGTTAGTGATTTAATTGATCATAATTATTGTGGTTGGAATGGACAGCTGGTGCATGAGCTCTTCATTGAGGAGGTGAGTAATAAAATCATGCAACTCCCTCTTTCCGTATCAATGCCTATTAACAGATTATATTGGTGGCCGTCAAAATTTGGTGAGTACTCTGCGAGATCGGGTTACTGGTTAGGTAGGATGGGCCGTTTGCGGGTGGAGATGGGTGGCATGGATGAATAAAATAAGGAGACATGTTGTACGATATGGGGCTAGGTTGTTAGGATCGGGATCCCACCTTGGATCGGTGAAGGGGGTAGGATCGAATCGGTAGAATCGGATCGTAGGATCGTAAGATCCTACAAAATTGTAAAAAGGAGTAAGAAAAATGCTGCTAAATGAATAAATAGTTAAAACTAGGGTTTCGGTTTGGTTCGCGAAACATCGCGGATTGGATCGCCGACGAACCGCGATCGGTACGTGCGAACCCGGTTCGAGATTCGCGGGGGTTTCCAGCGAACCAGGTAACGCTGGTAACGACAAATGTGGGTGTTGTGGGCAGGCATCGGAGTCAGTTGTCCACATACTATTTGAATGTACGGAAGCCAGATCGATATGGATGCATAGCAATTACTCGAGCCTCATTGAGGAAACACCTGCTACCTCCTTTGCAGCTACACTCATGTGGTTGGCTGGTAAAGTGAGCAGGACGGAGCTTAGGAGTATAATGGCGATTGCGTTGGCTATTTGATTCTGTCATAATAAACGTGTCCATGAGCAACTGCAGTTAAATGGGACGGTGATCGCTGCGAGCTTTGTGAGATTAGTGGAGGAACATGGCACATACGTGAAGCGAGTACAATGTATTCCTTCCTCTGCGATGCCTATCACAACGTCTGTTTGGGCATGCCCACCTCAAGGTATGGTAAAGGTCAACGTCGATGCACACACTGCGACTTCGTATGTGGGACTAGGGGTGGTCGTTCGTGGTGAAATGGGTCAAATCTTGCTGACTGCAACAAGGAGGATTGAGGTGTGTTGGGAGGTGGAAGTAGCAGAGGCAGCGGCTGCCAGTTTAGGGGCTCAAATTGCGAGAAGGTACAGGTTCGAACGAGTCTGGATTGAAGGTGATGCTTTGAATGTGGTTCGAACTATTGATACGAAGATGAAGGGCCCTTCACCTTTATGTTTGATTTACGATGATGAGATGAGCTATCAAAGCTATTGATGTTTTTGTTATATCTTATATTAAGAGGGAAGAGAATACAGTAGCCCACTTGGTGGTAAGGTGGGATACTCGGGGTAGTACTAAATCGATGTGTATGAACTCTTTTCCGCAAAGTATCACTACTCTTGCGGAACTTGATTTGGAATAATATCTCTGCCTAACTTTTCCCTCAAAAACAAAATTAAAAAAAGGTGAGCACTGTAAGTGCTTACAAGATAACCTGCTTTGCAGTTATCAATTAGTTTGTTTGGACCTTTTGAATTTGGCCGGAGTAGTTCTTTTTCAGGTTTTTACTTTTGTATTAGAATAGTGTGTGCATTGTGCAATATCAAGAATGCTGTTTCCATGAATGAAAAAACGAGTACCACTAACTAAATTAGAGCATAGAGAAGGGGGAGATACAAAATTGATCCAATATATTGATACGAACAATATTATTAACTGCCAAGCACGGTCCTGCTGTTGATTATGTCTAGAGCGTTTGAGATCAGGATTCAGGACATGACATAAGCATCTCTTTCAATGCTTGTACTATTAGTTCCTTGATAACAGGCAAGCATTCTGTGTCTTATGTTGATGTTTGGGATGACAACGACATATGATGTAACTTATTTTGCTTGTAAACATATCTCGTATATGGTATATCTGAGTGATGATGAAAAGGATTTCACTTTGGAAGATTGGTATAAATCATGCTGGACTGCACCCTTCTTCTGGATACTGAAATGTTAAGCTTTCATTTTCTTTTGGTCGACTTTGAGATATTCTTGAATTGCCTTGTGTTAAGTAGGAGCACTCACTTCTTCATTCTCTTCCCTCTGCTATGGTATTGGTTTCCCTTGAGACGGGTTCATTAACTTCTTGCTTGTTGTGATATGTATATATGATCAGCTCATATTGTGCACTGTGCTAGAATTGTTTGTTAAACAATTAGAAAGTTTAAGTGATTATGTACATTTTTCCCTAAATGCAATCAAAGGGAATGTGTATGCTGGGTCTGAGGGATTATGCTTTAAATGAAACTTGATGTCCCAGTGTTGATAATAAATGTATAGAGTGTTAAAACAATTGTTGCTAGTAAGTTAGTAACATACTCTGTAATGATTATGCTATTTTCCTCCATCCCTTGAAATTACGACTTTGATATATCATCCACTTATCATACTTTTGACTGCCACAATACAGGAAAACATTTGATGTTGCGAATCGCAGAAATGGTACCTCGGCATATTGGAAGAACTACTAAGAAACAAGAAACTAGTAAGAAGCAAGAAACTAGTAAGAAGCAGGATTCAGCCTCCAGCTCTAGTAATGCACCTGCTAAATCTGGCAAGGGTGGAAAGAAGAAAAAGTAAATCTAATTCTTTGCTTAATCAGTTTTTGTTGTTCAACATGACATTAGAAAAAGAACTGTAAATTGCCAGTTGACATTGTTGTGTTCAACTGTGACGAGTATTAGAAGTATTGTGTTTCTTATGCGGTGATGATACTGAGGGTAGTCCCCTTTTTTAAATGGAAATACTGAGGTTGATCTTGGTTATGTCTTATGTCTTATGTTTATCAGTATTATCACGGATAATTTCGCCTCAATTTCGTTAATGTTTGTTCTTCGGCTAGGAGAACTTCATCTAACTTCTGGTGATTTATTTTCATTTTGAGTTGCCTTTAACATGTGTAATGTGGATATTATTGTTGGGATGCGGAATTTGATTCATGGTGAATTGAGACTGAGACAACTAGTTCTTTCAGAACGATATAACGAAGAATGGAAAGTACAAGCAACAAAAGCTAGATGTTTTTTTCAGTCGAAAGCAATAACATAATTTTAGAGGACTCAATCAGCTTGTATTAATTCATCGTCATCATCTTAATTTACTAAAATACCATCTTTAA

mRNA sequence

ATGTTGATGCTCCTGATAAATGTTGATCAAGTGTTTAAGGTCAGAGTCATTTACTTTCTCTCTCATACCATAGCGATTCAACCGGAGTTCAAACTACATTCGCAAATGGTTTTAATAGAAGAAAAGATGAATGGCGAATTGCCCAATGTGAAGACGTGGGTGATATTATATCCAGTATACATCAATTCGAAGAAAACAATTGCCGAAGGCCGCCGAATTTGCACTACCAAAGCTTGCGAAAATCCTACTTGCGATGAAATTGGTGATTGCTGCAAATTTCTCAATCTTCCTTACCATAAAGAGGCTGAGAAGGCGTATCCAAGAGACTTTATGCAGAGAGGGAGGGTGAGAGTATTGCTAAAACAAGAAGATGGGAGTTTGTGTAATCCTGAGATTTCGTCGAGAAAACATTTGATGTTGCGAATCGCAGAAATGGTACCTCGGCATATTGGAAGAACTACTAAGAAACAAGAAACTAGTAAGAAGCAAGAAACTAGTAAGAAGCAGGATTCAGCCTCCAGCTCTAGTAATGCACCTGCTAAATCTGGCAAGGGTGGAAAGAAGAAAAAGTAAATCTAATTCTTTGCTTAATCAGTTTTTGTTGTTCAACATGACATTAGAAAAAGAACTGTAAATTGCCAGTTGACATTGTTGTGTTCAACTGTGACGAGTATTAGAAGTATTGTGTTTCTTATGCGGTGATGATACTGAGGGTAGTCCCCTTTTTTAAATGGAAATACTGAGGTTGATCTTGGTTATGTCTTATGTCTTATGTTTATCAGTATTATCACGGATAATTTCGCCTCAATTTCGTTAATGTTTGTTCTTCGGCTAGGAGAACTTCATCTAACTTCTGGTGATTTATTTTCATTTTGAGTTGCCTTTAACATGTGTAATGTGGATATTATTGTTGGGATGCGGAATTTGATTCATGGTGAATTGAGACTGAGACAACTAGTTCTTTCAGAACGATATAACGAAGAATGGAAAGTACAAGCAACAAAAGCTAGATGTTTTTTTCAGTCGAAAGCAATAACATAATTTTAGAGGACTCAATCAGCTTGTATTAATTCATCGTCATCATCTTAATTTACTAAAATACCATCTTTAA

Coding sequence (CDS)

ATGTTGATGCTCCTGATAAATGTTGATCAAGTGTTTAAGGTCAGAGTCATTTACTTTCTCTCTCATACCATAGCGATTCAACCGGAGTTCAAACTACATTCGCAAATGGTTTTAATAGAAGAAAAGATGAATGGCGAATTGCCCAATGTGAAGACGTGGGTGATATTATATCCAGTATACATCAATTCGAAGAAAACAATTGCCGAAGGCCGCCGAATTTGCACTACCAAAGCTTGCGAAAATCCTACTTGCGATGAAATTGGTGATTGCTGCAAATTTCTCAATCTTCCTTACCATAAAGAGGCTGAGAAGGCGTATCCAAGAGACTTTATGCAGAGAGGGAGGGTGAGAGTATTGCTAAAACAAGAAGATGGGAGTTTGTGTAATCCTGAGATTTCGTCGAGAAAACATTTGATGTTGCGAATCGCAGAAATGGTACCTCGGCATATTGGAAGAACTACTAAGAAACAAGAAACTAGTAAGAAGCAAGAAACTAGTAAGAAGCAGGATTCAGCCTCCAGCTCTAGTAATGCACCTGCTAAATCTGGCAAGGGTGGAAAGAAGAAAAAGTAA

Protein sequence

MLMLLINVDQVFKVRVIYFLSHTIAIQPEFKLHSQMVLIEEKMNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQETSKKQDSASSSSNAPAKSGKGGKKKK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo22969.1	Spo22969.1	mRNA

Homology

[Close]

BLAST of Spo22969.1 vs. NCBI nr
Match: gi|902200797|gb|KNA13828.1| (hypothetical protein SOVF_113050 [Spinacia oleracea])

HSP 1 Score: 294.3 bits (752), Expect = 1.500e-76
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


		  
Query: 43  MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 102
           MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA
Sbjct: 1   MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 60

Query: 103 EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 162
           EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK
Sbjct: 61  EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 120

Query: 163 QETSKKQDSASSSSNAPAKSGKGGKKKK 191
           QETSKKQDSASSSSNAPAKSGKGGKKKK
Sbjct: 121 QETSKKQDSASSSSNAPAKSGKGGKKKK 148

[Close]

BLAST of Spo22969.1 vs. NCBI nr
Match: gi|731364595|ref|XP_010694060.1| (PREDICTED: signal recognition particle 19 kDa protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 249.2 bits (635), Expect = 5.700e-63
Identity = 126/148 (85.14%), Postives = 130/148 (87.84%), Query Frame = 1


		  
Query: 43  MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 102
           MNGELPNVK WV+ YP+YINSKKTIAEGRRI  +KACENPTCDEIGDCCKFLNLPYHKE 
Sbjct: 1   MNGELPNVKKWVVFYPIYINSKKTIAEGRRISASKACENPTCDEIGDCCKFLNLPYHKEV 60

Query: 103 EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 162
           EKAYPRDFMQRGRVRVLLK+EDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQE    
Sbjct: 61  EKAYPRDFMQRGRVRVLLKREDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQE---- 120

Query: 163 QETSKKQDSASSSSNAPAKSGKGGKKKK 191
                   SASSSS APAKSGKGGKKKK
Sbjct: 121 --------SASSSSTAPAKSGKGGKKKK 136

[Close]

BLAST of Spo22969.1 vs. NCBI nr
Match: gi|449460339|ref|XP_004147903.1| (PREDICTED: signal recognition particle 19 kDa protein-like [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 1.300e-46
Identity = 101/148 (68.24%), Postives = 115/148 (77.70%), Query Frame = 1


		  
Query: 43  MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 102
           M+GE+PN+K WV+LYP+YINSKKTIAEGRRI  +KACENPTC EIGDCC  L LP+  E 
Sbjct: 1   MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEI 60

Query: 103 EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 162
           +KAYPRDFMQRGRVRVLLK+EDG+L NP I+SRK LMLRIAE+VPRH GRT         
Sbjct: 61  DKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPRHPGRT--------- 120

Query: 163 QETSKKQDSASSSSNAPAKSGKGGKKKK 191
               KKQ+ ASSSS A    GKGG+KKK
Sbjct: 121 ----KKQEPASSSSTAGPSKGKGGRKKK 135

[Close]

BLAST of Spo22969.1 vs. NCBI nr
Match: gi|593702673|ref|XP_007151746.1| (hypothetical protein PHAVU_004G071200g [Phaseolus vulgaris])

HSP 1 Score: 194.9 bits (494), Expect = 1.300e-46
Identity = 100/146 (68.49%), Postives = 117/146 (80.14%), Query Frame = 1


		  
Query: 46  ELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKA 105
           ELPN+K WV++YPVYINSKKT+AEGRRI   KACENPTC EIGDCC +L LP+  E +KA
Sbjct: 5   ELPNIKKWVVMYPVYINSKKTMAEGRRIGVAKACENPTCAEIGDCCSYLKLPFAIEIDKA 64

Query: 106 YPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQET 165
           YPRDFMQRGRVRVLLK+ED +LCNP ISSRK LMLR+AEMVPRH GRT            
Sbjct: 65  YPRDFMQRGRVRVLLKKEDETLCNPSISSRKQLMLRVAEMVPRHHGRT------------ 124

Query: 166 SKKQDSASSSSNAPA-KSGKGGKKKK 191
            KKQ++AS+S+ AP+ KSGKGGKK++
Sbjct: 125 -KKQETASTSTTAPSNKSGKGGKKRR 137

[Close]

BLAST of Spo22969.1 vs. NCBI nr
Match: gi|1021471860|ref|XP_016194130.1| (PREDICTED: signal recognition particle 19 kDa protein-like [Arachis ipaensis])

HSP 1 Score: 194.5 bits (493), Expect = 1.700e-46
Identity = 101/150 (67.33%), Postives = 120/150 (80.00%), Query Frame = 1


		  
Query: 43  MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 102
           ++GELPN+K W++LYPVYINSKKT+AEGRRI  +KACENPTC EIGDCC +L LP+  E 
Sbjct: 3   VDGELPNIKRWIVLYPVYINSKKTMAEGRRIGLSKACENPTCAEIGDCCSYLKLPFAIEI 62

Query: 103 EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 162
           +KAYPRDFMQRGRVRVLLK+EDG+L NP ISSRK LMLR+AEMVP+H GRT         
Sbjct: 63  DKAYPRDFMQRGRVRVLLKKEDGTLFNPTISSRKQLMLRVAEMVPKHHGRT--------- 122

Query: 163 QETSKKQDSASSSSNAPA--KSGKGGKKKK 191
               KKQ+ A+S+SNA A  KSGKGGKK++
Sbjct: 123 ----KKQEVAASTSNAGASNKSGKGGKKRR 139

[Close]

BLAST of Spo22969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2T6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113050 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.100e-76
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


		  
Query: 43  MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 102
           MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA
Sbjct: 1   MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 60

Query: 103 EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 162
           EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK
Sbjct: 61  EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 120

Query: 163 QETSKKQDSASSSSNAPAKSGKGGKKKK 191
           QETSKKQDSASSSSNAPAKSGKGGKKKK
Sbjct: 121 QETSKKQDSASSSSNAPAKSGKGGKKKK 148

[Close]

BLAST of Spo22969.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BF14_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g070160 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.000e-63
Identity = 126/148 (85.14%), Postives = 130/148 (87.84%), Query Frame = 1


		  
Query: 43  MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 102
           MNGELPNVK WV+ YP+YINSKKTIAEGRRI  +KACENPTCDEIGDCCKFLNLPYHKE 
Sbjct: 1   MNGELPNVKKWVVFYPIYINSKKTIAEGRRISASKACENPTCDEIGDCCKFLNLPYHKEV 60

Query: 103 EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 162
           EKAYPRDFMQRGRVRVLLK+EDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQE    
Sbjct: 61  EKAYPRDFMQRGRVRVLLKREDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQE---- 120

Query: 163 QETSKKQDSASSSSNAPAKSGKGGKKKK 191
                   SASSSS APAKSGKGGKKKK
Sbjct: 121 --------SASSSSTAPAKSGKGGKKKK 136

[Close]

BLAST of Spo22969.1 vs. UniProtKB/TrEMBL
Match: V7C387_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G071200g PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.900e-47
Identity = 100/146 (68.49%), Postives = 117/146 (80.14%), Query Frame = 1


		  
Query: 46  ELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKA 105
           ELPN+K WV++YPVYINSKKT+AEGRRI   KACENPTC EIGDCC +L LP+  E +KA
Sbjct: 5   ELPNIKKWVVMYPVYINSKKTMAEGRRIGVAKACENPTCAEIGDCCSYLKLPFAIEIDKA 64

Query: 106 YPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQET 165
           YPRDFMQRGRVRVLLK+ED +LCNP ISSRK LMLR+AEMVPRH GRT            
Sbjct: 65  YPRDFMQRGRVRVLLKKEDETLCNPSISSRKQLMLRVAEMVPRHHGRT------------ 124

Query: 166 SKKQDSASSSSNAPA-KSGKGGKKKK 191
            KKQ++AS+S+ AP+ KSGKGGKK++
Sbjct: 125 -KKQETASTSTTAPSNKSGKGGKKRR 137

[Close]

BLAST of Spo22969.1 vs. UniProtKB/TrEMBL
Match: A0A0S3T932_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G101100 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.500e-46
Identity = 98/149 (65.77%), Postives = 117/149 (78.52%), Query Frame = 1


		  
Query: 43  MNGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEA 102
           M+ +LPN+K W+++YPVYINSKKT+AEGRRI   KACENPTC EIGDCC +L LP+  E 
Sbjct: 1   MDAQLPNIKKWIVMYPVYINSKKTMAEGRRIAVAKACENPTCAEIGDCCSYLKLPFAIEI 60

Query: 103 EKAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKK 162
           +KAYPRDFMQRGRVRVLLK EDG+L NP ISSRK LMLR+AEMVPRH GRT         
Sbjct: 61  DKAYPRDFMQRGRVRVLLKTEDGTLINPSISSRKQLMLRVAEMVPRHHGRT--------- 120

Query: 163 QETSKKQDSASSSSNAPA-KSGKGGKKKK 191
               KKQ++AS+S+  P+ KSGKGGKK++
Sbjct: 121 ----KKQETASTSTTGPSQKSGKGGKKRR 136

[Close]

BLAST of Spo22969.1 vs. UniProtKB/TrEMBL
Match: B9RZY5_RICCO (Signal recognition particle 19 kD protein, putative OS=Ricinus communis GN=RCOM_1002940 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.600e-46
Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 1


		  
Query: 44  NGELPNVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAE 103
           +G +PN+K WV+LYPVYINSKKTIA+GRRICTTKACENPTC EIGDCC  L LP+  E +
Sbjct: 3   DGSIPNIKKWVVLYPVYINSKKTIAQGRRICTTKACENPTCVEIGDCCSHLKLPFAIEID 62

Query: 104 KAYPRDFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQ 163
           KAYPRDFMQ GRVRVLLK+EDG+L NP I +RK LML +AE+VPRH GRT          
Sbjct: 63  KAYPRDFMQIGRVRVLLKREDGTLYNPAIPTRKQLMLHVAELVPRHPGRT---------- 122

Query: 164 ETSKKQDSASSSSNAPAKSGKGGKKKK 191
              KKQ+SAS+S+   +KSGKGGKKK+
Sbjct: 123 ---KKQESASTSNAGTSKSGKGGKKKR 136

[Close]

BLAST of Spo22969.1 vs. ExPASy Swiss-Prot
Match: SRP19_ARATH (Signal recognition particle 19 kDa protein OS=Arabidopsis thaliana GN=SRP19 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.600e-41
Identity = 92/144 (63.89%), Postives = 111/144 (77.08%), Query Frame = 1


		  
Query: 49  NVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKAYPR 108
           N+K WV++YPVYINSKKT+AEGRRI  +K+CENP C EI DCCK L LP   E +KAYPR
Sbjct: 7   NIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYPR 66

Query: 109 DFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQETSKK 168
           DFMQ GRVRV LK+EDG+L NP I+SRKHLM +IAE+VPRH  R  KKQE  K    +KK
Sbjct: 67  DFMQVGRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRHPER-VKKQEAQK----AKK 126

Query: 169 QD--SASSSSNAPAKSGKGGKKKK 191
           Q+  + +S+S   +KSGKGGKKK+
Sbjct: 127 QEPQATTSTSGTSSKSGKGGKKKR 145

[Close]

BLAST of Spo22969.1 vs. ExPASy Swiss-Prot
Match: SRP19_ORYSJ (Signal recognition particle 19 kDa protein OS=Oryza sativa subsp. japonica GN=SRP19 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.300e-35
Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 1


		  
Query: 49  NVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKAYPR 108
           ++K W ++YPVY+NSKKT+AEGRRI + KAC +PTC EI DCC  L +P+  E +KAYPR
Sbjct: 9   SIKKWNVIYPVYLNSKKTVAEGRRIASGKACPDPTCVEIADCCSHLKIPHAIELDKAYPR 68

Query: 109 DFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQETSKK 168
           DF Q GRVRV LK++DGS  NP I ++K LM++IAE+VP+H GRT             KK
Sbjct: 69  DFFQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQIAELVPKHHGRT-------------KK 128

Query: 169 QDSASSSSNAPAKSGKGGKKKK 191
           Q+ A+SS+   +K GKGGKKKK
Sbjct: 129 QEPAASSTAGTSK-GKGGKKKK 136

[Close]

BLAST of Spo22969.1 vs. ExPASy Swiss-Prot
Match: SRP19_MOUSE (Signal recognition particle 19 kDa protein OS=Mus musculus GN=Srp19 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.600e-20
Identity = 67/141 (47.52%), Postives = 81/141 (57.45%), Query Frame = 1


		  
Query: 53  WVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKAYP----R 112
           ++ +YP Y+N+KKTIAEGRRI  +KA ENPT  EI D C  + L    E  K Y     R
Sbjct: 15  FIFIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNAFLEKNKMYSREWNR 74

Query: 113 DFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQETSKK 172
           D   RGRVRV LKQEDGSLC  +  SRK +ML +AEM+P+   RT K    S   +   +
Sbjct: 75  DVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQK----SGGADPILQ 134

Query: 173 QDSASSSSNAPAKSGKGGKKK 190
           Q   S       K GKG KKK
Sbjct: 135 QGEGS-------KKGKGKKKK 144

[Close]

BLAST of Spo22969.1 vs. ExPASy Swiss-Prot
Match: SRP19_PONAB (Signal recognition particle 19 kDa protein OS=Pongo abelii GN=SRP19 PE=1 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 6.000e-20
Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 1


		  
Query: 53  WVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKAYP----R 112
           ++ +YP Y+N+KKTIAEGRRI  +KA ENPT  EI D C  + L    E  K Y     R
Sbjct: 15  FICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNR 74

Query: 113 DFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQETSKK 172
           D   RGRVRV LKQEDGSLC  +  SRK +ML  AEM+P+     T+ Q+T    ++ ++
Sbjct: 75  DVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPK---LKTRTQKTGGADQSLQQ 134

Query: 173 QDSASSSSNAPAKSGKGGKKK 190
            +         +K GKG KKK
Sbjct: 135 GEG--------SKKGKGKKKK 144

[Close]

BLAST of Spo22969.1 vs. ExPASy Swiss-Prot
Match: SRP19_HUMAN (Signal recognition particle 19 kDa protein OS=Homo sapiens GN=SRP19 PE=1 SV=3)

HSP 1 Score: 99.0 bits (245), Expect = 6.000e-20
Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 1


		  
Query: 53  WVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKAYP----R 112
           ++ +YP Y+N+KKTIAEGRRI  +KA ENPT  EI D C  + L    E  K Y     R
Sbjct: 15  FICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNR 74

Query: 113 DFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQETSKK 172
           D   RGRVRV LKQEDGSLC  +  SRK +ML  AEM+P+     T+ Q+T    ++ ++
Sbjct: 75  DVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPK---LKTRTQKTGGADQSLQQ 134

Query: 173 QDSASSSSNAPAKSGKGGKKK 190
            +         +K GKG KKK
Sbjct: 135 GEG--------SKKGKGKKKK 144

[Close]

BLAST of Spo22969.1 vs. TAIR (Arabidopsis)
Match: AT1G48160.1 (signal recognition particle 19 kDa protein, putative / SRP19, putative)

HSP 1 Score: 170.6 bits (431), Expect = 9.100e-43
Identity = 92/144 (63.89%), Postives = 111/144 (77.08%), Query Frame = 1


		  
Query: 49  NVKTWVILYPVYINSKKTIAEGRRICTTKACENPTCDEIGDCCKFLNLPYHKEAEKAYPR 108
           N+K WV++YPVYINSKKT+AEGRRI  +K+CENP C EI DCCK L LP   E +KAYPR
Sbjct: 7   NIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYPR 66

Query: 109 DFMQRGRVRVLLKQEDGSLCNPEISSRKHLMLRIAEMVPRHIGRTTKKQETSKKQETSKK 168
           DFMQ GRVRV LK+EDG+L NP I+SRKHLM +IAE+VPRH  R  KKQE  K    +KK
Sbjct: 67  DFMQVGRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRHPER-VKKQEAQK----AKK 126

Query: 169 QD--SASSSSNAPAKSGKGGKKKK 191
           Q+  + +S+S   +KSGKGGKKK+
Sbjct: 127 QEPQATTSTSGTSSKSGKGGKKKR 145

The following BLAST results are available for this feature:

BLAST of Spo22969.1 vs. NCBI nr
BLAST of Spo22969.1 vs. UniProtKB/TrEMBL
BLAST of Spo22969.1 vs. ExPASy Swiss-Prot
BLAST of Spo22969.1 vs. TAIR (Arabidopsis)

BLAST of Spo22969.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902200797\|gb\|KNA13828.1\|	1.5e-76	100.	hypothetical protein SOVF_1130...	[more]
gi\|731364595\|ref\|XP_010694060.1\|	5.7e-63	85.1	PREDICTED: signal recognition ...	[more]
gi\|449460339\|ref\|XP_004147903.1\|	1.3e-46	68.2	PREDICTED: signal recognition ...	[more]
gi\|593702673\|ref\|XP_007151746.1\|	1.3e-46	68.4	hypothetical protein PHAVU_004...	[more]
gi\|1021471860\|ref\|XP_016194130.1\|	1.7e-46	67.3	PREDICTED: signal recognition ...	[more]

BLAST of Spo22969.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R2T6_SPIOL	1.1e-76	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BF14_BETVU	4.0e-63	85.1	Uncharacterized protein OS=Bet...	[more]
V7C387_PHAVU	8.9e-47	68.4	Uncharacterized protein OS=Pha...	[more]
A0A0S3T932_PHAAN	1.5e-46	65.7	Uncharacterized protein OS=Vig...	[more]
B9RZY5_RICCO	2.6e-46	66.6	Signal recognition particle 19...	[more]

BLAST of Spo22969.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SRP19_ARATH	1.6e-41	63.8	Signal recognition particle 19...	[more]
SRP19_ORYSJ	1.3e-35	55.6	Signal recognition particle 19...	[more]
SRP19_MOUSE	4.6e-20	47.5	Signal recognition particle 19...	[more]
SRP19_PONAB	6.0e-20	45.3	Signal recognition particle 19...	[more]
SRP19_HUMAN	6.0e-20	45.3	Signal recognition particle 19...	[more]

BLAST of Spo22969.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G48160.1	9.1e-43	63.8	signal recognition particle 19...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002778	Signal recognition particle, SRP19 subunit	GENE3D	3.30.56.30		coord: 45..159 score: 1.5
IPR002778	Signal recognition particle, SRP19 subunit	PANTHER	PTHR17453	SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN	coord: 3..190 score: 9.3
IPR002778	Signal recognition particle, SRP19 subunit	PFAM	PF01922	SRP19	coord: 55..148 score: 4.3
IPR002778	Signal recognition particle, SRP19 subunit	unknown	SSF69695	SRP19	coord: 48..149 score: 2.75
None	No IPR available	PANTHER	PTHR17453:SF0	SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN	coord: 3..190 score: 9.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0008152	metabolic process
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0016874	ligase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06403	0.96	Barchart \| Table
Spo08478	0.68	Barchart \| Table