Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCGGTGGATAACACAAATGGAATACCAACCACCTTCATCATCTTCTTCTTTATCATCATCATCATCATCATCTTCTTCTTCTTTATCATCATCATCATCATCATCTTCTTCTTCTTTATCATCATCATCATCATCATCATCATCTTCATCTTCATCTTCTTCCTTAACATCTTCAACTCCATCATCAATCTCAAAGACTGAAGAACTTGATTATCCACTCCATGCTATCGGCTTCGAAATCGATGAAGTTTCTCCCGCTAAAGTCACCGGCCGTCTTCTTGTCACTCACAAATGTTGCCAGGTTTCTTCATTTTCTCTGCAATTATAATCTCTCTTCATTCTTATGTTGTTTCTTAATTTATTGATGTTTTTTGTGTATGAAATTAGTATTAAATTTAGTTGCTTTTACTAATAATTCAGCTAGCTGATATTTTTTCCTGAAAAGTTTATACTTTTATTAGCTTTCTTAGAAAAGTGGTACGTTATACTGCCTTCCTAATAATCACTATCTTTTAATTTCTTTCAAAAGTTTGTTGTATTTTGTGACATCGTATTTATGATTGATAAATAATTACACTCTCCGTTCCCATTTATTTGACACGTTCTGATCGGCCCATAATTAAGTTTATGTAATTTTAATTGACTTAATATTTTATACTAAATAAATATATTAGTGAAATATTTGCGTTTAACAAAGAACACTCTTGAGTTGTGTAGACTTGTAGCTAGGGATATCTAGACACATTGATGCATATTACGAGTAGTTTAAATAAGTTACAATGAGATCAAACACTAGAAGTCAATTTTAGTTTAAAACACACAACAAGCCAACAGTTCGTTATTAATATAACTTGATGAATTGAAACGGTGGTTACATTAATAAAAGCGAGATCATTAATTTGAGCATTGTTACCAACATTTTTCGCACCAAAAAAAAAGTTGGTTATTATTAATGATACAAAAATATTCTATTATCTATACTAATATATTAAAAGACGTTCTTGAGAACGTATATGTGTCACGTATATCACTCCTTATTACGCCACATCACCACTAATCAGCATCATGAAATGTCATTGATGTATATCACTCCTTATTACGCCACATCACCACTAATCAACATCATGACATGTAGCAAGGATAGCAAGGATCGAACACCTGACCTCTTTGTTAAATGTTGCATTTCCTATCATCTTAACCAACTACAACTTATGTTATATTTTCTATATATATAAACATATATGTTCTTTTACAATAAATAACAAATTGAATAAAATTGAATGCAAAAAAAAGGGAATGATTACTTCATTTATAAATATACAATTATTATTTTCCTAGATTAAGCCTCAAAAAAAAAAATAAGCCCGGGGTAAGAGGAGAAACATTGACGGTTAGTAATTATAGAACAATATACATGCACACGGGTGCACCGTGAACTCTCTCACATTTTCTCCTTACATGTGAGGAGAAAATGTGATAGAGACCACCAATGGGTATAAAAGTGCCATTGGGTAGACGATGAACTAATAATGTCCAGAGTAATGAATCAACTAATGATGAAGAAAAGGATCCGACTTTGTTTTGAATTTCGGATGTGGGGTTTCAGCTTGGGAATGTTACTAATCGACCGCTAATCTTGTGTCACCACCATAATTCTATGACGACACCATTTATGTGGGCGCATATTTACAACAAATAAATCCGTATAAAAGTCAGAACTCGGGGCAACGCCCGGGCCACGCACTAATTATTAATTTAAAACCCGAGATGATGTATTAAATGTGAACATATGGTTCAACAGCCGTTCAAGGTTTTACACGGAGGAGTATCGGCGTTGATAGCGGAGTCACTGGCGAGCATGGGAGCACACATGGCAAGTGGGCTAAAGCGGGTGGCCGGCATTCACCTAAGCATCAACCACATGAAGGGGGCTAAGCTAGGTGACCTTGTTCTTGCTCAGGCCCTTCCTCTAACACTTGGCCGTACTATTCAGGTGTTCATTTCTATTCTTTGTAGAAATGTTTTATTATATTAGTGAACTCTAAAATCATTTATTGTAAGATTTGCAATAACGTCGATTAAATTGGTACGAAATATTATTAGTCAATTGTCGAACTAACAGTTTAGAGCGTGGTAGGTGACTAAATGTTGTTGTTTTGCGGACTTGTGACAAATTTCTGATCACATTGTAGTAGAGTAAAGTTATTCTAAGATGCAATGTTCCACCTACCACCCATTTTCATACTAGGAGAAAAATATAGGTCTACAAACGGATTGAATCCTCTATCCCATTATTGTTTTTCATTTCCCTAATACAGAGTATATTTTACTAATATACTCCCTCCGTCCCCTAATATTCGCACCGCTTTTCTTTTCGAGCCGTCCCTTAATACTTGCATCGCTTCTATAAATGGAAATTTATACCAATATTATATTATTTCTCACACTTATTTACCAACCCCACCTACACCCCTATTCCCTACAAAAAATCATTTAAAAATTCACACCCCCACTCACCACTCTCCACCTCTTAGCCATTTCCTACTAACTATATTAAAAAAATACCCCACTATCAACCAACACCCATTAAATTAATAAGTCAATTCAAATGTTTTAAACTCCGCACCGATCAAACCGGTGCAAGTATTAAGGGACGGAGGGAGTACTTCGTATTTACTGAGTTGGACCAATAAGGTAGAGTGGTATAGAGAATGGGACACAATTGTGCGATAGAGGGAAGCCCTCATCTAACAATAGGGAGTAGGTGGGATGAATGGATGATGGCTTTATTGACTCGTTAGCAACTACCAGCCGTGATTGTGATTGAAGTACTGAGATGTAAACACGACCTTTGGATTTAGTCAATGTCATGCTAATATTAATGATGATACTTATTTTGATACTTAATTAGTGGATGATTTATACTTGTTTTGGTACTTAATTAGTGGATGATGTATACTTGTTTTGGTGCTTAATTAACGGTTGATGAATCATTATTGGTTAATTGTAGTAACTAGTAGCAGGCACACATTTGTAAATTATACTTGTTTGTTAACACACGTACTGTTGGGATATGATGAAGCAGGTATGGGAAGTGCAACTTTGGAAAACAGAGCCCAGCAAAACCTTGGTATCATCTTCCCGTGTTACTCTGCTTTGCAACCTTCCTGTGCCAGACGATGCCAAGGATGCTGATAAACATCTTCGAAAATATGCCAAACTATGACTTCTAAGTTCTGATTGATTAATCATACACCGTAAATCAAGTTGAAATGTTAGTACATATATATTTGTCTAAACACTCTAAAGTAAACCCAGATAACTTGCAAGTCACATACAAGGCTAGCAACTGGAGCCATAGCCATTGTTATTTTCTCGTCTGATCCTCTGTTTAAAGATGGTATTTTAGTAAATTAAGATGATGACGATGAATTAATACAAGCTGATTGAGTCCTCTAAAATTATGTTATTGCTTTCGACTGAAAAAAACATCTAGCTTTTGTTGCTTGTACTTTCCATTCTTCGTTATATCGTTCTGAAAGAACTAGTTGTCTCAGTCTCAATTCACCATGAATCAAATTCCGCATCCCAACAATAATATCCACATTACACATGTTAAAGGCAACTCAAAATGAAAATAAATCACCAGAAGTTAGATGAAGTTCTCCTAGCCGAAGAACAAACATTAACGAAATTGAGGCGAAATTATCCGTGATAATACTGATAAACATAAGACATAAGACATAACCAAGATCAACCTCAGTATTTCCATTTAAAAAAGGGGACTACCCTCAGTATCATCACCGCATAAGAAACACAATACTTCTAATACTCGTCACAGTTGAACACAACAATGTCAACTGGCAATTTACAGTTCTTTTTCTAATGTCATGTTGAACAACAAAAACTGATTAAGCAAAGAATTAGATTTACTTTTTCTTCTTTCCACCCTTGCCAGATTTAGCAGGTGCATTACTAGAGCTGGAGGCTGAATCCTGCTTCTTACTAGTTTCTTGCTTCTTACTAGTTTCTTGTTTCTTAGTAGTTCTTCCAATATGCCGAGGTACCATTTCTGCGATTCGCAACATCAAATGTTTTCCTGTATTGTGGCAGTCAAAAGTATGATAAGTGGATGATATATCAAAGTCGTAATTTCAAGGGATGGAGGAAAATAGCATAATCATTACAGAGTATGTTACTAACTTACTAGCAACAATTGTTTTAACACTCTATACATTTATTATCAACACTGGGACATCAAGTTTCATTTAAAGCATAATCCCTCAGACCCAGCATACACATTCCCTTTGATTGCATTTAGGGAAAAATGTACATAATCACTTAAACTTTCTAATTGTTTAACAAACAATTCTAGCACAGTGCACAATATGAGCTGATCATATATACATATCACAACAAGCAAGAAGTTAATGAACCCGTCTCAAGGGAAACCAATACCATAGCAGAGGGAAGAGAATGAAGAAGTGAGTGCTCCTACTTAACACAAGGCAATTCAAGAATATCTCAAAGTCGACCAAAAGAAAATGAAAGCTTAACATTTCAGTATCCAGAAGAAGGGTGCAGTCCAGCATGATTTATACCAATCTTCCAAAGTGAAATCCTTTTCATCATCACTCAGATATACCATATACGAGATATGTTTACAAGCAAAATAAGTTACATCATATGTCGTTGTCATCCCAAACATCAACATAAGACACAGAATGCTTGCCTGTTATCAAGGAACTAATAGTACAAGCATTGAAAGAGATGCTTATGTCATGTCCTGAATCCTGATCTCAAACGCTCTAGACATAATCAACAGCAGGACCGTGCTTGGCAGTTAATAATATTGTTCGTATCAATATATTGGATCAATTTTGTATCTCCCCCTTCTCTATGCTCTAATTTAGTTAGTGGTACTCGTTTTTTCATTCATGGAAACAGCATTCTTGATATTGCACAATGCACACACTATTCTAATACAAAAGTAAAAACCTGAAAAAGAACTACTCCGGCCAAATTCAAAAGGTCCAAACAAACTAATTGATAACTGCAAAGCAGGTTATCTTGTAAGCACTTACAGTGCTCACCTTTTTTTAATTTTGTTTTTGAGGGAAAAGTTAGGCAGAGATATTATTCCAAATCAAGTTCCGCAAGAGTAGTGATACTTTGCGGAAAAGAGTTCATACACATCGATTTAGTACTACCC CACCGGTGGATAACACAAATGGAATACCAACCACCTTCATCATCTTCTTCTTTATCATCATCATCATCATCATCTTCTTCTTCTTTATCATCATCATCATCATCATCTTCTTCTTCTTTATCATCATCATCATCATCATCATCATCTTCATCTTCATCTTCTTCCTTAACATCTTCAACTCCATCATCAATCTCAAAGACTGAAGAACTTGATTATCCACTCCATGCTATCGGCTTCGAAATCGATGAAGTTTCTCCCGCTAAAGTCACCGGCCGTCTTCTTGTCACTCACAAATGTTGCCAGCCGTTCAAGGTTTTACACGGAGGAGTATCGGCGTTGATAGCGGAGTCACTGGCGAGCATGGGAGCACACATGGCAAGTGGGCTAAAGCGGGTGGCCGGCATTCACCTAAGCATCAACCACATGAAGGGGGCTAAGCTAGGTGACCTTGTTCTTGCTCAGGCCCTTCCTCTAACACTTGGCCGTACTATTCAGGTATGGGAAGTGCAACTTTGGAAAACAGAGCCCAGCAAAACCTTGGTATCATCTTCCCGTGTTACTCTGCTTTGCAACCTTCCTGTGCCAGACGATGCCAAGGATGCTGATAAACATCTTCGAAAATATGCCAAACTATGACTTCTAAGTTCTGATTGATTAATCATACACCGTAAATCAAGTTGAAATGTTAGTACATATATATTTGTCTAAACACTCTAAAGTAAACCCAGATAACTTGCAAGTCACATACAAGGCTAGCAACTGGAGCCATAGCCATTGTTATTTTCTCGTCTGATCCTCTGTTTAAAGATGGTATTTTAGTAAATTAAGATGATGACGATGAATTAATACAAGCTGATTGAGTCCTCTAAAATTATGTTATTGCTTTCGACTGAAAAAAACATCTAGCTTTTGTTGCTTGTACTTTCCATTCTTCGTTATATCGTTCTGAAAGAACTAGTTGTCTCAGTCTCAATTCACCATGAATCAAATTCCGCATCCCAACAATAATATCCACATTACACATGTTAAAGGCAACTCAAAATGAAAATAAATCACCAGAAGTTAGATGAAGTTCTCCTAGCCGAAGAACAAACATTAACGAAATTGAGGCGAAATTATCCGTGATAATACTGATAAACATAAGACATAAGACATAACCAAGATCAACCTCAGTATTTCCATTTAAAAAAGGGGACTACCCTCAGTATCATCACCGCATAAGAAACACAATACTTCTAATACTCGTCACAGTTGAACACAACAATGTCAACTGGCAATTTACAGTTCTTTTTCTAATGTCATGTTGAACAACAAAAACTGATTAAGCAAAGAATTAGATTTACTTTTTCTTCTTTCCACCCTTGCCAGATTTAGCAGGTGCATTACTAGAGCTGGAGGCTGAATCCTGCTTCTTACTAGTTTCTTGCTTCTTACTAGTTTCTTGTTTCTTAGTAGTTCTTCCAATATGCCGAGGTACCATTTCTGCGATTCGCAACATCAAATGTTTTCCTGTATTGTGGCAGTCAAAAGTATGATAAGTGGATGATATATCAAAGTCGTAATTTCAAGGGATGGAGGAAAATAGCATAATCATTACAGATGCACAATATGAGCTGATCATATATACATATCACAACAAGCAAGAAGTTAATGAACCCGTCTCAAGGGAAACCAATACCATAGCAGAGGGAAGAGAATGAAGAAGTGAGTGCTCCTACTTAACACAAGGCAATTCAAGAATATCTCAAAGTCGACCAAAAGAAAATGAAAGCTTAACATTTCAGTATCCAGAAGAAGGGTGCAGTCCAGCATGATTTATACCAATCTTCCAAAGTGAAATCCTTTTCATCATCACTCAGATATACCATATACGAGATATGTTTACAAGCAAAATAAGTTACATCATATGTCGTTGTCATCCCAAACATCAACATAAGACACAGAATGCTTGCCTGTTATCAAGGAACTAATAGTACAAGCATTGAAAGAGATGCTTATGTCATGTCCTGAATCCTGATCTCAAACGCTCTAGACATAATCAACAGCAGGACCGTGCTTGGCAGTTAATAATATTGTTCGTATCAATATATTGGATCAATTTTGTATCTCCCCCTTCTCTATGCTCTAATTTAGTTAGTGGTACTCGTTTTTTCATTCATGGAAACAGCATTCTTGATATTGCACAATGCACACACTATTCTAATACAAAAGTAAAAACCTGAAAAAGAACTACTCCGGCCAAATTCAAAAGGTCCAAACAAACTAATTGATAACTGCAAAGCAGGTTATCTTGTAAGCACTTACAGTGCTCACCTTTTTTTAATTTTGTTTTTGAGGGAAAAGTTAGGCAGAGATATTATTCCAAATCAAGTTCCGCAAGAGTAGTGATACTTTGCGGAAAAGAGTTCATACACATCGATTTAGTACTACCC ATGGAATACCAACCACCTTCATCATCTTCTTCTTTATCATCATCATCATCATCATCTTCTTCTTCTTTATCATCATCATCATCATCATCTTCTTCTTCTTTATCATCATCATCATCATCATCATCATCTTCATCTTCATCTTCTTCCTTAACATCTTCAACTCCATCATCAATCTCAAAGACTGAAGAACTTGATTATCCACTCCATGCTATCGGCTTCGAAATCGATGAAGTTTCTCCCGCTAAAGTCACCGGCCGTCTTCTTGTCACTCACAAATGTTGCCAGCCGTTCAAGGTTTTACACGGAGGAGTATCGGCGTTGATAGCGGAGTCACTGGCGAGCATGGGAGCACACATGGCAAGTGGGCTAAAGCGGGTGGCCGGCATTCACCTAAGCATCAACCACATGAAGGGGGCTAAGCTAGGTGACCTTGTTCTTGCTCAGGCCCTTCCTCTAACACTTGGCCGTACTATTCAGGTATGGGAAGTGCAACTTTGGAAAACAGAGCCCAGCAAAACCTTGGTATCATCTTCCCGTGTTACTCTGCTTTGCAACCTTCCTGTGCCAGACGATGCCAAGGATGCTGATAAACATCTTCGAAAATATGCCAAACTATGA MEYQPPSSSSSLSSSSSSSSSSLSSSSSSSSSSLSSSSSSSSSSSSSSSLTSSTPSSISKTEELDYPLHAIGFEIDEVSPAKVTGRLLVTHKCCQPFKVLHGGVSALIAESLASMGAHMASGLKRVAGIHLSINHMKGAKLGDLVLAQALPLTLGRTIQVWEVQLWKTEPSKTLVSSSRVTLLCNLPVPDDAKDADKHLRKYAKL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22966.1 vs. NCBI nr
Match: gi|902200796|gb|KNA13827.1| (hypothetical protein SOVF_113040 [Spinacia oleracea]) HSP 1 Score: 286.2 bits (731), Expect = 4.600e-74 Identity = 148/161 (91.93%), Postives = 153/161 (95.03%), Query Frame = 1
BLAST of Spo22966.1 vs. NCBI nr
Match: gi|731364597|ref|XP_010694061.1| (PREDICTED: uncharacterized protein LOC104906930 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 268.9 bits (686), Expect = 7.500e-69 Identity = 143/171 (83.63%), Postives = 158/171 (92.40%), Query Frame = 1
BLAST of Spo22966.1 vs. NCBI nr
Match: gi|870845991|gb|KMS98619.1| (hypothetical protein BVRB_3g070170 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 268.9 bits (686), Expect = 7.500e-69 Identity = 143/171 (83.63%), Postives = 158/171 (92.40%), Query Frame = 1
BLAST of Spo22966.1 vs. NCBI nr
Match: gi|729385722|ref|XP_010551116.1| (PREDICTED: uncharacterized protein LOC104821814 [Tarenaya hassleriana]) HSP 1 Score: 230.3 bits (586), Expect = 3.000e-57 Identity = 118/152 (77.63%), Postives = 130/152 (85.53%), Query Frame = 1
BLAST of Spo22966.1 vs. NCBI nr
Match: gi|590662719|ref|XP_007036026.1| (Thioesterase superfamily protein [Theobroma cacao]) HSP 1 Score: 223.0 bits (567), Expect = 4.700e-55 Identity = 111/161 (68.94%), Postives = 136/161 (84.47%), Query Frame = 1
BLAST of Spo22966.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4T6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113040 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 3.200e-74 Identity = 148/161 (91.93%), Postives = 153/161 (95.03%), Query Frame = 1
BLAST of Spo22966.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BB68_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g070170 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 5.200e-69 Identity = 143/171 (83.63%), Postives = 158/171 (92.40%), Query Frame = 1
BLAST of Spo22966.1 vs. UniProtKB/TrEMBL
Match: A0A061ERE5_THECC (Thioesterase superfamily protein OS=Theobroma cacao GN=TCM_021511 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.300e-55 Identity = 111/161 (68.94%), Postives = 136/161 (84.47%), Query Frame = 1
BLAST of Spo22966.1 vs. UniProtKB/TrEMBL
Match: A0A067JYY4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19108 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 4.300e-55 Identity = 115/156 (73.72%), Postives = 133/156 (85.26%), Query Frame = 1
BLAST of Spo22966.1 vs. UniProtKB/TrEMBL
Match: U5FX66_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s00640g PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.100e-54 Identity = 121/172 (70.35%), Postives = 143/172 (83.14%), Query Frame = 1
BLAST of Spo22966.1 vs. ExPASy Swiss-Prot
Match: DNAT1_ARATH (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana GN=DHNAT1 PE=1 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.400e-53 Identity = 105/154 (68.18%), Postives = 126/154 (81.82%), Query Frame = 1
BLAST of Spo22966.1 vs. ExPASy Swiss-Prot
Match: DNAT2_ARATH (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2 OS=Arabidopsis thaliana GN=DHNAT2 PE=2 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.400e-43 Identity = 85/143 (59.44%), Postives = 111/143 (77.62%), Query Frame = 1
BLAST of Spo22966.1 vs. ExPASy Swiss-Prot
Match: Y788_PASMU (Putative esterase PM0788 OS=Pasteurella multocida (strain Pm70) GN=PM0788 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.300e-6 Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 1
BLAST of Spo22966.1 vs. TAIR (Arabidopsis)
Match: AT1G48320.1 (Thioesterase superfamily protein) HSP 1 Score: 209.5 bits (532), Expect = 1.900e-54 Identity = 105/154 (68.18%), Postives = 126/154 (81.82%), Query Frame = 1
BLAST of Spo22966.1 vs. TAIR (Arabidopsis)
Match: AT5G48950.1 (Thioesterase superfamily protein) HSP 1 Score: 177.6 bits (449), Expect = 8.000e-45 Identity = 85/143 (59.44%), Postives = 111/143 (77.62%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22966.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22966.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22966.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo22966.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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