Spo22761 (gene)

Overview
NameSpo22761
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_05507 : 2530 .. 5363 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAGTCTTTCTTCGTCTCCTCCAAGGGTCCAACTTGCTACTTTCTCTCTCCTCACTTCCAGGTTTCTTCGTGATTTTCTCTCTCTCCTCCTACTCGATGCTTTCTCCTTCCCTCAACTCTGCTCTCACTGCATCTACATCATGAGCTTCTTTTCCTCTGGGGGTGCTGCGCTTTTTCCCCTTCCTCACACGCTCTCTTTCTCTCTGCTCTTCATGAGAGACTTCAATCCACTGCAGCTAGGGCATACCTTGAGTAGCAACACAACGGAGACGAAAAATTCACCAAGCAAACGAAGAAGTATTCGTCTCAATTGCTGTCGAAGGTGAGCCGATCCACCTATTTCTAGGGTTTAGGGTTCGTAATTTGCCACCGTTCCCGCAAAATAGAGGTACCTTTCTCTAATTATTATTATTATTATCTTCTTACCACATCTTTCATGATTTCAATAATTTTTTGCTAGAATGTAAACTTTGGAAATTTGGGAATATTATTTAGGGTCATTTTTTACTTTCACTTCTTTGATTGATGTGCATTTAGTTATGCTTATTCAAATCACATTTTTTTGCTAATGAATTTCTTAATTGTGAATTAACATTTAGATAATTTGGTGGCGCTTTTGAATTGGCAGGTGAGGAGAATTAAGCTCCAGAAAAGTGAAAGGCTAGCGCAAGCAACACCAACAAAAGAGGTGGCTACAAGATCAATGAAAACAAGCTCCTTCCCAAGAGAAAAACAGGTTTTTTTTTTTAAAAAAAAAAATTCGAAGTTATTCTTGAATGATTCTTATTATTTTTCAATAAAGCGTTAAGTTCTGGAATCAATATTTGTAGTTGTGAATTTCGATTATATTTGAATTTGGTAAATCTGGGTAGATTGAGTTGATCAAAATTGCTGATGGGTTGGTAAGGAATTAAGCTAATAATCACTCATTTATATGGATTTGATTGGTTGTTGTTTTAAGATGTAGAGAGAGTCTAAGGGAGGCCTATGAGGGGGTTTTATTGAGTGCTTTATCCCCGAGTATTCTAAGCTTAGTAGTCATATTATGCTGATGGATTTTTCTATTGCCTATTTCGTGTGTAAGAACTTAGTTAAGCTTTTATCAGTTAAGTTGACACTTACTCTTTACCCCATTGTAATGAGATTATTGTATTAGATTAATTTTTGTTTATCTTACAAACAACATCCAAGATTAACAACTCCAACAGCGTTTCTGATATAGTTAAACAAAGTCCCTACATTGTTGGGTTACTAGGTATATATATGGGTTTGTTTGTTACAACCTCACATGCGAATAAAGACTTTTTCTTGAATATTTTTCAGAAGTTGAGAATTGCACATGGTATACGAACTTTATTGCGGAGAAATGTTAAGTGGGTTCATACTGAATAACTAGCGCACATTCCTTCTGCCTTCGAGGAAATTGGTTGATCATTAATATGAGAGATGTTAACTAACTTCAATCTGCAGCTGTTCAATTCATACCAATTCTTGCAGCGTATTTAAACATTGTACTTGGAGTATTATATGTCGTTCTACATGGGTTTAGGGGGCATATCTGGAAGAAGGTAGCTCCAAGCTTCTAACTGTACTGTCATCTTTATTAACATATGTTTTTTCTTTAAGGAAGCCTCAATCGGTAATATCCTCTTTTTCGACCGATCTGTTGACATCGTTATAAAATTCTCACTTTGAAGCTTGATTTAATGAATGTGATAGTAAACTGCATACAAAACTTAATTATATCCTCTATGAAAAAAGAACGCCAACAACACTCCAAAGCATGCTCTTATGAAGTAATCGACTGACTTTGCCCACCAGATTGCTAACCACTCTAAACTCTGTAGTGGATTCTCTTTTTTAATTGTTCATGGTAATATATTGACATCGAATTCATCTCTTCATTTTGGGGTACTTTTTCTTGAATTTGATGATTGTGGTTTGAGATTGTTATTATGATTGTTATATAAACTCTACTAGATGCATGAGTTTAGACGAACTTCAGTGTATAGGTGACATTTTGTGCAGCTGTCTATGCTTGTTTTGTTGTGGATAATCCGTTAATTATGATAGCAGTTTTATCAGGTAACATATTGTTTGTATATGAGGAATTGGAGAGGAAGGGGGGAAGGGAAAGTGAGGAGAACAAGTTCTCTTGTTTGGATAAAAGGTTGTGGGAACTGGGAAGGAAGGAGAAGGAGAGAGATCCCGCGTATCTGTTTGCACTATACTTTATCAATTTATTTGTCAATATAATATTACATAGATTTCTCTTTATATATTCTAAGGGCTTTGCAATATTTTTTGAATCTGAATTTGTTTTATTTAGAGAATGATTTTGAAACGGAATTGAATAATACAAGGTTGTATTTGACATATATTTGGGAAATAATATGTTCAAGAGTTCTTTACGAGCTTCAATTTATTTTTATGATTTTGGTGGGTTGCAATTGAATTATTTTGTGGGGTACTTCTAACAGGTGAGCTTAGAGAAGTGGCTGAGTTGCAATGCAGTGCCGATAGGGTTCATGCTTCAGGTAACTATACTATATTTTGTTAAAGTATTGCCTTTTCTGGGCCATTAATATTTCTAATGGCAATACTTTGGTGTTGTCCTGTCATCACCGTAGGTGGCGAAGCATGTCAACAACTCCTCGTGATCCCCTAACCTCTCTATTGATTTCCGTGGTTTCATCTCCGTCATTATGTTCCGGGTATACCTCCATTTCTTATCTGTAGCCCTTTATTACTTATTTACTTTCTTATACAATTTTGACTTTTGCCAATTGCCATTTTTCAGTTTAATTTTTATAATCGCATTAAACTTCAC

mRNA sequence

ATGCCGAGTCTTTCTTCGTCTCCTCCAAGGGTCCAACTTGCTACTTTCTCTCTCCTCACTTCCAGGTTTCTTCGTGATTTTCTCTCTCTCCTCCTACTCGATGCTTTCTCCTTCCCTCAACTCTGCTCTCACTGCATCTACATCATGAGCTTCTTTTCCTCTGGGGGTGCTGCGCTTTTTCCCCTTCCTCACACGCTCTCTTTCTCTCTGCTCTTCATGAGAGACTTCAATCCACTGCAGCTAGGGCATACCTTGAGTAGCAACACAACGGAGACGAAAAATTCACCAAGCAAACGAAGAAGGTTCGTAATTTGCCACCGTTCCCGCAAAATAGAGGTGAGGAGAATTAAGCTCCAGAAAAGTGAAAGGCTAGCGCAAGCAACACCAACAAAAGAGGTGGCTACAAGATCAATGAAAACAAGCTCCTTCCCAAGAGAAAAACAGAAGTTGAGAATTGCACATGCTGTTCAATTCATACCAATTCTTGCAGCGTATTTAAACATTGTACTTGGAGTATTATATGTCGTTCTACATGGGTTTAGGGGGCATATCTGGAAGAAGGTGAGCTTAGAGAAGTGGCTGAGTTGCAATGCAGTGCCGATAGGGTTCATGCTTCAGGTGGCGAAGCATGTCAACAACTCCTCGTGATCCCCTAACCTCTCTATTGATTTCCGTGGTTTCATCTCCGTCATTATGTTCCGGGTATACCTCCATTTCTTATCTGTAGCCCTTTATTACTTATTTACTTTCTTATACAATTTTGACTTTTGCCAATTGCCATTTTTCAGTTTAATTTTTATAATCGCATTAAACTTCAC

Coding sequence (CDS)

ATGCCGAGTCTTTCTTCGTCTCCTCCAAGGGTCCAACTTGCTACTTTCTCTCTCCTCACTTCCAGGTTTCTTCGTGATTTTCTCTCTCTCCTCCTACTCGATGCTTTCTCCTTCCCTCAACTCTGCTCTCACTGCATCTACATCATGAGCTTCTTTTCCTCTGGGGGTGCTGCGCTTTTTCCCCTTCCTCACACGCTCTCTTTCTCTCTGCTCTTCATGAGAGACTTCAATCCACTGCAGCTAGGGCATACCTTGAGTAGCAACACAACGGAGACGAAAAATTCACCAAGCAAACGAAGAAGGTTCGTAATTTGCCACCGTTCCCGCAAAATAGAGGTGAGGAGAATTAAGCTCCAGAAAAGTGAAAGGCTAGCGCAAGCAACACCAACAAAAGAGGTGGCTACAAGATCAATGAAAACAAGCTCCTTCCCAAGAGAAAAACAGAAGTTGAGAATTGCACATGCTGTTCAATTCATACCAATTCTTGCAGCGTATTTAAACATTGTACTTGGAGTATTATATGTCGTTCTACATGGGTTTAGGGGGCATATCTGGAAGAAGGTGAGCTTAGAGAAGTGGCTGAGTTGCAATGCAGTGCCGATAGGGTTCATGCTTCAGGTGGCGAAGCATGTCAACAACTCCTCGTGA

Protein sequence

MPSLSSSPPRVQLATFSLLTSRFLRDFLSLLLLDAFSFPQLCSHCIYIMSFFSSGGAALFPLPHTLSFSLLFMRDFNPLQLGHTLSSNTTETKNSPSKRRRFVICHRSRKIEVRRIKLQKSERLAQATPTKEVATRSMKTSSFPREKQKLRIAHAVQFIPILAAYLNIVLGVLYVVLHGFRGHIWKKVSLEKWLSCNAVPIGFMLQVAKHVNNSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo22761.1Spo22761.1mRNA


Homology
[Close]
BLAST of Spo22761.1 vs. NCBI nr
Match: gi|902214726|gb|KNA17464.1| (hypothetical protein SOVF_079730 [Spinacia oleracea])

HSP 1 Score: 64.7 bits (156), Expect = 2.300e-7
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1 

		  

Query: 186 KKVSLEKWLSCNAVPIGFMLQVAKHVNNSS 216
           K+VSLEKWLSCNAVPIGFMLQVAKHVNNSS
Sbjct: 10  KQVSLEKWLSCNAVPIGFMLQVAKHVNNSS 39
[Close]
BLAST of Spo22761.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RES1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_079730 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.600e-7
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1 

		  

Query: 186 KKVSLEKWLSCNAVPIGFMLQVAKHVNNSS 216
           K+VSLEKWLSCNAVPIGFMLQVAKHVNNSS
Sbjct: 10  KQVSLEKWLSCNAVPIGFMLQVAKHVNNSS 39
The following BLAST results are available for this feature:
BLAST of Spo22761.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902214726|gb|KNA17464.1|2.3e-796.6hypothetical protein SOVF_0797... [more]
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BLAST of Spo22761.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9RES1_SPIOL1.6e-796.6Uncharacterized protein OS=Spi... [more]
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BLAST of Spo22761.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo22761.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006544 glycine metabolic process
biological_process GO:0046827 positive regulation of protein export from nucleus
biological_process GO:0048767 root hair elongation
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009651 response to salt stress
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009733 response to auxin
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0006833 water transport
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0009729 detection of brassinosteroid stimulus
biological_process GO:0009742 brassinosteroid mediated signaling pathway
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007165 signal transduction
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006605 protein targeting
biological_process GO:0017038 protein import
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0008033 tRNA processing
biological_process GO:0001510 RNA methylation
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0016579 protein deubiquitination
biological_process GO:0000338 protein deneddylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009640 photomorphogenesis
biological_process GO:0016571 histone methylation
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0008643 carbohydrate transport
biological_process GO:0006096 glycolytic process
biological_process GO:0009637 response to blue light
biological_process GO:0033388 putrescine biosynthetic process from arginine
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0016310 phosphorylation
biological_process GO:0009088 threonine biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009451 RNA modification
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006560 proline metabolic process
biological_process GO:0006412 translation
biological_process GO:0006325 chromatin organization
biological_process GO:0006397 mRNA processing
biological_process GO:0009909 regulation of flower development
biological_process GO:0006281 DNA repair
cellular_component GO:0009507 chloroplast
cellular_component GO:0005829 cytosol
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0009536 plastid
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016592 mediator complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016597 amino acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0030515 snoRNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0003913 DNA photolyase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0031369 translation initiation factor binding
molecular_function GO:0004072 aspartate kinase activity
molecular_function GO:0047632 agmatine deiminase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0050321 tau-protein kinase activity
molecular_function GO:0000989 transcription factor activity, transcription factor binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0009881 photoreceptor activity
molecular_function GO:0008374 O-acyltransferase activity
molecular_function GO:0004620 phospholipase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004668 protein-arginine deiminase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0010181 FMN binding
RNA-Seq Expression