Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGCTGATTTGGGACATTTTTCAGCTTGTTCAATTAAGGTATCTCTTGCATTCTGTTTTGCACTTCCTGCATATCTTGTGAATGGATTGTAACACATTGATAGTTCACATTTTCCAGACAGCATTTACTTTTCTGGTTTACCCTTGTTTGGTTTTGGCTTATATGGGTGAGGCTGCCTTCCTGTCTTGTCATAATGAAGATATTCAGAGGAGCTTCTACAAAGCTATTCCAGGTTAAATTTACTTACTGTTCCTGTTCAAGTCTCACAGATTTGAAACTTTGTTTTATTAAAGTTATATTCCATCTTGTTTTGCAATAGAACCAATATTCTGGCCGGTTTTCATAGTGGCTACATTTGCGGCGGTAGTAGAACCAGTATTCGGTCTGGAAAGGTAACCTTTCTTACTGTGATATTTTGCATTCTTGTCTCCAAAAACAAACTAGAAATAACTATTTTGTAGTGGAGCATTCAGATCTCTTGGGAATTTTTTAGCAAGTCCTTCATGTTGGCTTTAATAAGTTCCCTCTTGTGCCTTGTCTAGCCTATTTTATATCCAAAATGGTGAGAAACTCTTGCAATACTGCGTAGGGTATGCCTTGTTGCTTTACTGTTGTGACTTGTGAGCAATGGGGGGAACCCATCTCCTACATTTTGCACGCTAAAAAATATATTATGCCTTATCTTTAAAGAAACCAAATTTGTTCCTTGCTTTTTTTGGTATGTCCAAACACTGGTTAATAATGTGATTTGGTAGCTGAATCTGTTGGTTGCTATTAAAAGTTGGTGAAGAAGGACTTGATATACAGACATGTTGTCTTGTAATAGGTTTTGATCTTCCTGAAACTCTGGCAAGCTTTATACAGTCCAAGTTTCGAATGGAAAATCGTTTTGGACTTTGATCTTCTTTGAAAAATTATATTCTTAATCATGACTGTATTTTAGATCTCACATAGACAAAGTAGTTGATGGACATAATAATTTAACTTTTGAAGTAGTAATGCAAACGACATAGAAATACAACCAGTAACAAAAAATAACGTCAATAAAATACTACATTTACTTAGTGTTTAATGGGGTAATGCAAAACATACCTTCGTTTTTTTAAAGTTATTCGATGTTGGTTTATTTGTCGGGGAAGTACGTTTTCATATGTTCATTTTTTAAATTCATTATTGGGGAAGTACTAATCCCCCGACCTCTCATCTTGATTTATTTGTTTAATTTCTTTGCAGGGCTCGGTACGAGGAGGATGACACTCATTCAAAGAGAGGTGTTCTCCTGCTGTATAGAGCAAGGTGGGCAACGGATAGGAGAAGGGTGATTATTTTGTACTTCAGAACCTGTAATATTTGTTAATTTTGCTTGTCAGCTCAAAATTTTGGGATAGAAATGTTGATGTAATATGTAGATTGATTGAATGTAATGGTGGCTTGGTGTTTATTGCTATAATCAGGTGGTGGGTGTATTTCATTTGGTTGTTTCACTAGGGACTAGTCTGGCAATGGATTTTTCATCTGATTTTTTTTTTGTAAAATAAATGTACTATTTGCAGCGCGCACTGATAAGTGAATGCTGCGAATAGGGTTAGAAATGTGGCTTTGAAACCTCTTTTTGCAGCGCCTGCAGCTGCTAAGGGCTGTGAAAAATGGACATTTCACAGTGCGTGTGAAACCCCATGCGCTGCAATTAATGGTTTTTTGCAGCGTTTTTGTTCGCTGCGAATAAAAATCCACTATTTGCAGCCATCACAATTGCAGCGCTCAAAAACGTTGCAAAAAGC ATGTTTGCTGATTTGGGACATTTTTCAGCTTGTTCAATTAAGACAGCATTTACTTTTCTGGTTTACCCTTGTTTGGTTTTGGCTTATATGGGTGAGGCTGCCTTCCTGTCTTGTCATAATGAAGATATTCAGAGGAGCTTCTACAAAGCTATTCCAGAACCAATATTCTGGCCGGTTTTCATAGTGGCTACATTTGCGGCGGTAGTAGAACCAGTATTCGGTCTGGAAAGGGCTCGGTACGAGGAGGATGACACTCATTCAAAGAGAGGTGTTCTCCTGCTGTATAGAGCAAGGTGGGCAACGGATAGGAGAAGGGTGATTATTTTGTACTTCAGAACCTGTAATATTTGTTAATTTTGCTTGTCAGCTCAAAATTTTGGGATAGAAATGTTGATGTAATATGTAGATTGATTGAATGTAATGGTGGCTTGGTGTTTATTGCTATAATCAGGTGGTGGGTGTATTTCATTTGGTTGTTTCACTAGGGACTAGTCTGGCAATGGATTTTTCATCTGATTTTTTTTTTGTAAAATAAATGTACTATTTGCAGCGCGCACTGATAAGTGAATGCTGCGAATAGGGTTAGAAATGTGGCTTTGAAACCTCTTTTTGCAGCGCCTGCAGCTGCTAAGGGCTGTGAAAAATGGACATTTCACAGTGCGTGTGAAACCCCATGCGCTGCAATTAATGGTTTTTTGCAGCGTTTTTGTTCGCTGCGAATAAAAATCCACTATTTGCAGCCATCACAATTGCAGCGCTCAAAAACGTTGCAAAAAGC ATGTTTGCTGATTTGGGACATTTTTCAGCTTGTTCAATTAAGACAGCATTTACTTTTCTGGTTTACCCTTGTTTGGTTTTGGCTTATATGGGTGAGGCTGCCTTCCTGTCTTGTCATAATGAAGATATTCAGAGGAGCTTCTACAAAGCTATTCCAGAACCAATATTCTGGCCGGTTTTCATAGTGGCTACATTTGCGGCGGTAGTAGAACCAGTATTCGGTCTGGAAAGGGCTCGGTACGAGGAGGATGACACTCATTCAAAGAGAGGTGTTCTCCTGCTGTATAGAGCAAGGTGGGCAACGGATAGGAGAAGGGTGATTATTTTGTACTTCAGAACCTGTAATATTTGTTAA MFADLGHFSACSIKTAFTFLVYPCLVLAYMGEAAFLSCHNEDIQRSFYKAIPEPIFWPVFIVATFAAVVEPVFGLERARYEEDDTHSKRGVLLLYRARWATDRRRVIILYFRTCNIC Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22673.1 vs. NCBI nr
Match: gi|902231862|gb|KNA22423.1| (hypothetical protein SOVF_034150 [Spinacia oleracea]) HSP 1 Score: 136.0 bits (341), Expect = 4.300e-29 Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 1
BLAST of Spo22673.1 vs. NCBI nr
Match: gi|731377747|ref|XP_010667962.1| (PREDICTED: uncharacterized protein LOC104884951 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 134.8 bits (338), Expect = 9.700e-29 Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 1
BLAST of Spo22673.1 vs. NCBI nr
Match: gi|870841065|gb|KMS95006.1| (hypothetical protein BVRB_013290 isoform B, partial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 134.8 bits (338), Expect = 9.700e-29 Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 1
BLAST of Spo22673.1 vs. NCBI nr
Match: gi|870841064|gb|KMS95005.1| (hypothetical protein BVRB_013290 isoform A, partial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 134.8 bits (338), Expect = 9.700e-29 Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 1
BLAST of Spo22673.1 vs. NCBI nr
Match: gi|729415968|ref|XP_010557198.1| (PREDICTED: potassium transporter 1 [Tarenaya hassleriana]) HSP 1 Score: 128.3 bits (321), Expect = 9.100e-27 Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of Spo22673.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSI3_SPIOL (Potassium transporter OS=Spinacia oleracea GN=SOVF_034150 PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.000e-29 Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 1
BLAST of Spo22673.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DVZ3_BETVU (Uncharacterized protein (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_013290 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 6.700e-29 Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 1
BLAST of Spo22673.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B215_BETVU (Potassium transporter (Fragment) OS=Beta vulgaris subsp. vulgaris GN=BVRB_013290 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 6.700e-29 Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 1
BLAST of Spo22673.1 vs. UniProtKB/TrEMBL
Match: A0A078ELJ9_BRANA (Potassium transporter OS=Brassica napus GN=BnaC04g14750D PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.100e-26 Identity = 58/69 (84.06%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of Spo22673.1 vs. UniProtKB/TrEMBL
Match: A0A078D6A3_BRANA (Potassium transporter OS=Brassica napus GN=BnaA03g13690D PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.100e-26 Identity = 58/69 (84.06%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of Spo22673.1 vs. ExPASy Swiss-Prot
Match: POT1_ARATH (Potassium transporter 1 OS=Arabidopsis thaliana GN=POT1 PE=1 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 1.600e-28 Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of Spo22673.1 vs. ExPASy Swiss-Prot
Match: HAK13_ORYSJ (Probable potassium transporter 13 OS=Oryza sativa subsp. japonica GN=HAK13 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.100e-21 Identity = 46/69 (66.67%), Postives = 55/69 (79.71%), Query Frame = 1
BLAST of Spo22673.1 vs. ExPASy Swiss-Prot
Match: HAK2_ORYSJ (Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.100e-19 Identity = 43/69 (62.32%), Postives = 55/69 (79.71%), Query Frame = 1
BLAST of Spo22673.1 vs. ExPASy Swiss-Prot
Match: POT4_ARATH (Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2) HSP 1 Score: 95.5 bits (236), Expect = 4.100e-19 Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 1
BLAST of Spo22673.1 vs. ExPASy Swiss-Prot
Match: HAK7_ORYSJ (Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3) HSP 1 Score: 95.1 bits (235), Expect = 5.300e-19 Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 1
BLAST of Spo22673.1 vs. TAIR (Arabidopsis)
Match: AT2G30070.1 (potassium transporter 1) HSP 1 Score: 126.7 bits (317), Expect = 9.300e-30 Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of Spo22673.1 vs. TAIR (Arabidopsis)
Match: AT3G02050.1 (K+ uptake transporter 3) HSP 1 Score: 95.5 bits (236), Expect = 2.300e-20 Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 1
BLAST of Spo22673.1 vs. TAIR (Arabidopsis)
Match: AT1G60160.1 (Potassium transporter family protein) HSP 1 Score: 93.6 bits (231), Expect = 8.700e-20 Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 1
BLAST of Spo22673.1 vs. TAIR (Arabidopsis)
Match: AT4G19960.1 (K+ uptake permease 9) HSP 1 Score: 85.1 bits (209), Expect = 3.100e-17 Identity = 36/69 (52.17%), Postives = 53/69 (76.81%), Query Frame = 1
BLAST of Spo22673.1 vs. TAIR (Arabidopsis)
Match: AT1G70300.1 (K+ uptake permease 6) HSP 1 Score: 84.3 bits (207), Expect = 5.300e-17 Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22673.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22673.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22673.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo22673.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|