Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATTCCATCGACCCAAAATAAATTGCACTAAAAAATCAAAATCAAATCATAAATTGGTTTCCCAATCATACTACACAAATACACACACCCAAAAAAAAAGTAGGTTTGGGCACAAAAATAATATTTCTTTAATTTTATACCTAAAAAAAATAAGTTAATTTAATTTAAATTAATATGGCCGTCCAAAATGGTCAAATAAACGTGAAAAATTAATCAAAAGTCTCCTACCTCAATTCTCAACCGTGTCACTGCACACACCCCTCTATATATTCATCTTCTTATCATTCTTATTGATTTAGGATTTTAGGACTACAGATTTTACAAGTTTCCGAAATTTGTGTCTTTTTGCAAGATTTATTTTGGTCCCCTTATAAATTTTTATTCCATTTTTGAGGTAAATTAATAATTTATTGTAGTTTGGTGGAATTTTATTCTTCACATAAATTAAACTTCCAATTCCATTTTGCCAGATTCTTTATTATGTATGGTTGTAATTAATAAAAAAAATTGAGAGATTTCTTCTGGTTCATCCTGTTTTGGGAAGAGGACTTCTGACCCTCAGACGCCTCATCCATAGTGGCATCCTTATCTCTCTTTTTCTCTCTCTCCTCAATCACAACATCAATTTATATTTTAATTTATATTCCCCCAATTTGCCTTCCCTTTTTCTCTTGCTTTTTCTGCCCAATTTGTAATAAATTGGGGAGAAAGTGAAAGTTATTTGATTTTGGTGTTTCAATAAAATTCATTGAATCCCATGTAAAAACCCCCCAATTTATAACTTGGGGGGAGATTAATTGTTCAAATTGGTTTCTGGGTTTTGATTATTTTGTTGGATTGGATTCTGGGTTTTGATTAATTTGTTCAAATTTGGGGTTGAAATGGGATTAATGGAGGCATTTTCGGTTGGAGGAGGATTAGTGATGGAGATTATGTTAGTTATCACTCCAATTTGGACTGCCTTTCTTCTCGGTCTTGTAATTGGATGGACATGGTGCCCGAAATGGTGGAAGAATTTGGACAAGAATACGTTTGATTCATTCATCTCAAAAATTGGGGAATTTTCAGCTCCTTCATATTCTACTTCAAAAGGGTTTCCTTCTATTCAGAGCTTCACTCAATTTAACTTGAAATTTCCAAGCTCCAGCAGTCAATCAACTGGGGATGATAGTATCAGTGCAAATAATCAGACATCAGCTTTGCAACCCAGGTAATTTCTATTTCTGTTTTTTTTTAAATTTAATTTTTGTTTTTGTTTATATAATTACATGATGTTGTTTGAATATGTGCACAATTTCTGGGTTTTCATTGCTTTGAACTTTTGTTTTAAGTTGCTGAGTTTTGTTTGAATTTGTGTGCATGAATTGTGAGTAAGAGTTGACTATGTTCAGTTGTTCACCATGAAATTGGGATTAGTTTATTTTAGTGGAATTTTGGAAGTTAGTAATAAAGATGTGGTTTTGGTTGTTGTGTAGTTCATCAAAGCTTAAAGGAGGTGAGGAGCATAATGTTGTGAATGAAGGTGATCTAGAACATATTTATAAGCTTGTTGAGGAGAAAGATGGAGGTCCTTCTTGGATACAAATGATGGACCGTTCAACCCCAACCATGAATTATCGAGCTTGGCGGCGAGACCCCGAGGTAAATTTCACCTTCTGGTCTTGAAATTCCTTGCTTGTTAATGATTTCTTTAATAAGTTTGATGGAAAATGAAGTGTTACAACCTTGCTTGTTAGTAATTTCTTTAGTAAGTTTGATGGAAAATGAAGTTTAGGGTTGATGGCAAATGAAATGTTGCAATCTTGGTCATTGTGTAGTTGTTTTAGGCTCTTAGCTAGGTGGTTATGAATTGCTGATACATGTGATGTTTGAAGCCATAACTAAGAAAAAAGTCGAATGGAATCGAGTGTATTATGAATTTATGATGGATGATTGAGGCTTCTTATTTTGATTATGTACTTATTGTGTGAATTTATGTATCTGTTTTTGTTAGACTGGTCCTCCTCAATATCGTAGTAGTACAATATTTGAAGATGCAACACCTGAGATGGTGAGGGACTTCTTCTGGGATGATGATTTTCGACCAAAGTGGGACAACATGCTCATACAATCTCAAATTCTTGAAGAGTCTCAAACCACAGGAACCATGATAGTGCAATGGGTTCGCAAAGTAAGGTTTCGTTTCTTTATGAATCAATGTGGTGGATTGACTCATGTGTTGGCATGTAATTGACTTTTGTTGGTTGTCTTGTGCAGTTTCCGTTCTTCTGCAGTGATCGAGAGTACATAATTGGCCGTAGGATATGGGAGTCTGAAAGAACATATTACTGTGTGACAAAGGTAAATACCTTTTATTATGCAACTATACAAGTTTGTTATGGTCCTGAATCTATAGTTTATCTCCATTGAAGACTTGATTGTAATATAAATACTGATCCTACCTTCTCCAATCAACATCGATATTACCTCAATTCTTCTACTTATATGAACTTTTCAACATTCTGTTAATTCACAACATAGTAAAGGAAGGTTGCAATAATAGACAGGTTGCTTTCAATAGACCCTAATTCAATATGCAATGATCAAATGTTCATTCACAACAAAGTTTCAACCACGCACAATTCAATTAGTCACGTTTATTTAGTTGATCACTATCCAAAAGCCAAAGAACAGTTTGTGTGATTGACCATGTTGCTCTCATTTCCCTTTCCTTCTCGGTAGGAGACTACTTGAAGTGGAAAAAGGACAGTGTGGGCTGCTGTTCTTGAGTTCATCAAGTGTAAAAGTGACATATGATAAAGTGGAAAAAGACTTGCATTATTGTGATTAAACCTCTTGTTACTGAAGTCTACTACTACTAGTTTAAAAAACGCCATCTTTTTTACTTTGAATTTTCATGTGCTCGGCATTTGAAGCTCAATGTGGATGCTAATGATTTTTGTTTCCATTTTTCTCTTCAGGGAGTACCCAACTCTGTACCACGAAAGGACAAACCAAGACGTGTGGATCTGTATTATTCAAGTTGGTGTATTCGTCCAGGTTGGTTTCATTTCTCTAATCTTATTTTGGTGTGAAAGCCATTGAATTTCAGTCCATAGATACTTGGGTTTACTACAATTATCTTGTATTTTGTACTTTCTGCTTGTTTTCTTGTGAATAACAAGGGTTCTGATGTCTCTATTTTGATGGTGTAACAGTGGAATCCAGGAAAGGAACTGGAGAAATGACAGCATGTGAAGTGCTTCTCTTTCATCACGAAGACATGGGAATTCCATGGGAAATAGCGAAACTTGGTGTCCGACAAGGGATGTGGGGAGCGGTTAAGAAAATCGACCCTGGTCTACGAGCTTACTATAAAGCAAGAGCTGCCGGTGGGCCCCTCTCACCCGCAGCCTCCATGGCTCAAATCAACACTAAAGTGAACCCAAATTATTTGAAATCTTTATTGACCGGCGATAGTCTGTCAGTGACCGAAGTAGTAGTTCCTCCCGAGGAGAAACAACAAGGAGGGATGAACATGAACGTGCCAAAGGTTCTCATTTTTAGCGGGGCAGTTGCTCTTGCATGCAGTCTTGACCGAGGGCTCCTAACAAAGGCGGTTATCTTTGGCGTTGCACGGAAACTAGGAAGAATAGGAGGGAAATTATAACCAACTGGAGACCGTGCTTTAATGAGGTAGTATTGACATTCCTGCATCATGTTAGGAAGACAATCCCAAACACACCCCCTTCCCAAAAATAACCGGAAAATAAAAAAAGTTCGAAACCCAGAATCGAAATTTCACAAAGGCGGCATTCTAGGGAGTTTTGCATGTTGTAGCAAGTAGCAGCATGAAGCTACAAAAGCTGTAGTTGAAGAAAAACAGATCATAGAGTTGTATATCTGCAGAAAACTGATTCTCTTTTTCTTCGATTTATCGCTGATGTACTAGCTGAGTAGCTAGTTCTTATTATTTTGATATATGCAAAGCAAATACAAGTATATTCATATATTATGTCTATATACTTTCCTTTCTTTCTCATGAAATTTCTGCTGTTATTTTGTGTCAATTTGATTTTCTCTGAATTCTGTT CAAAATTCCATCGACCCAAAATAAATTGCACTAAAAAATCAAAATCAAATCATAAATTGGTTTCCCAATCATACTACACAAATACACACACCCAAAAAAAAAGTAGGTTTGGGCACAAAAATAATATTTCTTTAATTTTATACCTAAAAAAAATAAGTTAATTTAATTTAAATTAATATGGCCGTCCAAAATGGTCAAATAAACGTGAAAAATTAATCAAAAGTCTCCTACCTCAATTCTCAACCGTGTCACTGCACACACCCCTCTATATATTCATCTTCTTATCATTCTTATTGATTTAGGATTTTAGGACTACAGATTTTACAAGTTTCCGAAATTTGTGTCTTTTTGCAAGATTTATTTTGGTCCCCTTATAAATTTTTATTCCATTTTTGAGGTAAATTAATAATTTATTGTAGTTTGGTGGAATTTTATTCTTCACATAAATTAAACTTCCAATTCCATTTTGCCAGATTCTTTATTATGTATGGTTGTAATTAATAAAAAAAATTGAGAGATTTCTTCTGGTTCATCCTGTTTTGGGAAGAGGACTTCTGACCCTCAGACGCCTCATCCATAGTGGCATCCTTATCTCTCTTTTTCTCTCTCTCCTCAATCACAACATCAATTTATATTTTAATTTATATTCCCCCAATTTGCCTTCCCTTTTTCTCTTGCTTTTTCTGCCCAATTTGTAATAAATTGGGGAGAAAGTGAAAGTTATTTGATTTTGGTGTTTCAATAAAATTCATTGAATCCCATGTAAAAACCCCCCAATTTATAACTTGGGGGGAGATTAATTGTTCAAATTGGTTTCTGGGTTTTGATTATTTTGTTGGATTGGATTCTGGGTTTTGATTAATTTGTTCAAATTTGGGGTTGAAATGGGATTAATGGAGGCATTTTCGGTTGGAGGAGGATTAGTGATGGAGATTATGTTAGTTATCACTCCAATTTGGACTGCCTTTCTTCTCGGTCTTGTAATTGGATGGACATGGTGCCCGAAATGGTGGAAGAATTTGGACAAGAATACGTTTGATTCATTCATCTCAAAAATTGGGGAATTTTCAGCTCCTTCATATTCTACTTCAAAAGGGTTTCCTTCTATTCAGAGCTTCACTCAATTTAACTTGAAATTTCCAAGCTCCAGCAGTCAATCAACTGGGGATGATAGTATCAGTGCAAATAATCAGACATCAGCTTTGCAACCCAGTTCATCAAAGCTTAAAGGAGGTGAGGAGCATAATGTTGTGAATGAAGGTGATCTAGAACATATTTATAAGCTTGTTGAGGAGAAAGATGGAGGTCCTTCTTGGATACAAATGATGGACCGTTCAACCCCAACCATGAATTATCGAGCTTGGCGGCGAGACCCCGAGACTGGTCCTCCTCAATATCGTAGTAGTACAATATTTGAAGATGCAACACCTGAGATGGTGAGGGACTTCTTCTGGGATGATGATTTTCGACCAAAGTGGGACAACATGCTCATACAATCTCAAATTCTTGAAGAGTCTCAAACCACAGGAACCATGATAGTGCAATGGGTTCGCAAATTTCCGTTCTTCTGCAGTGATCGAGAGTACATAATTGGCCGTAGGATATGGGAGTCTGAAAGAACATATTACTGTGTGACAAAGGGAGTACCCAACTCTGTACCACGAAAGGACAAACCAAGACGTGTGGATCTGTATTATTCAAGTTGGTGTATTCGTCCAGTGGAATCCAGGAAAGGAACTGGAGAAATGACAGCATGTGAAGTGCTTCTCTTTCATCACGAAGACATGGGAATTCCATGGGAAATAGCGAAACTTGGTGTCCGACAAGGGATGTGGGGAGCGGTTAAGAAAATCGACCCTGGTCTACGAGCTTACTATAAAGCAAGAGCTGCCGGTGGGCCCCTCTCACCCGCAGCCTCCATGGCTCAAATCAACACTAAAGTGAACCCAAATTATTTGAAATCTTTATTGACCGGCGATAGTCTGTCAGTGACCGAAGTAGTAGTTCCTCCCGAGGAGAAACAACAAGGAGGGATGAACATGAACGTGCCAAAGGTTCTCATTTTTAGCGGGGCAGTTGCTCTTGCATGCAGTCTTGACCGAGGGCTCCTAACAAAGGCGGTTATCTTTGGCGTTGCACGGAAACTAGGAAGAATAGGAGGGAAATTATAACCAACTGGAGACCGTGCTTTAATGAGGTAGTATTGACATTCCTGCATCATGTTAGGAAGACAATCCCAAACACACCCCCTTCCCAAAAATAACCGGAAAATAAAAAAAGTTCGAAACCCAGAATCGAAATTTCACAAAGGCGGCATTCTAGGGAGTTTTGCATGTTGTAGCAAGTAGCAGCATGAAGCTACAAAAGCTGTAGTTGAAGAAAAACAGATCATAGAGTTGTATATCTGCAGAAAACTGATTCTCTTTTTCTTCGATTTATCGCTGATGTACTAGCTGAGTAGCTAGTTCTTATTATTTTGATATATGCAAAGCAAATACAAGTATATTCATATATTATGTCTATATACTTTCCTTTCTTTCTCATGAAATTTCTGCTGTTATTTTGTGTCAATTTGATTTTCTCTGAATTCTGTT ATGGGATTAATGGAGGCATTTTCGGTTGGAGGAGGATTAGTGATGGAGATTATGTTAGTTATCACTCCAATTTGGACTGCCTTTCTTCTCGGTCTTGTAATTGGATGGACATGGTGCCCGAAATGGTGGAAGAATTTGGACAAGAATACGTTTGATTCATTCATCTCAAAAATTGGGGAATTTTCAGCTCCTTCATATTCTACTTCAAAAGGGTTTCCTTCTATTCAGAGCTTCACTCAATTTAACTTGAAATTTCCAAGCTCCAGCAGTCAATCAACTGGGGATGATAGTATCAGTGCAAATAATCAGACATCAGCTTTGCAACCCAGTTCATCAAAGCTTAAAGGAGGTGAGGAGCATAATGTTGTGAATGAAGGTGATCTAGAACATATTTATAAGCTTGTTGAGGAGAAAGATGGAGGTCCTTCTTGGATACAAATGATGGACCGTTCAACCCCAACCATGAATTATCGAGCTTGGCGGCGAGACCCCGAGACTGGTCCTCCTCAATATCGTAGTAGTACAATATTTGAAGATGCAACACCTGAGATGGTGAGGGACTTCTTCTGGGATGATGATTTTCGACCAAAGTGGGACAACATGCTCATACAATCTCAAATTCTTGAAGAGTCTCAAACCACAGGAACCATGATAGTGCAATGGGTTCGCAAATTTCCGTTCTTCTGCAGTGATCGAGAGTACATAATTGGCCGTAGGATATGGGAGTCTGAAAGAACATATTACTGTGTGACAAAGGGAGTACCCAACTCTGTACCACGAAAGGACAAACCAAGACGTGTGGATCTGTATTATTCAAGTTGGTGTATTCGTCCAGTGGAATCCAGGAAAGGAACTGGAGAAATGACAGCATGTGAAGTGCTTCTCTTTCATCACGAAGACATGGGAATTCCATGGGAAATAGCGAAACTTGGTGTCCGACAAGGGATGTGGGGAGCGGTTAAGAAAATCGACCCTGGTCTACGAGCTTACTATAAAGCAAGAGCTGCCGGTGGGCCCCTCTCACCCGCAGCCTCCATGGCTCAAATCAACACTAAAGTGAACCCAAATTATTTGAAATCTTTATTGACCGGCGATAGTCTGTCAGTGACCGAAGTAGTAGTTCCTCCCGAGGAGAAACAACAAGGAGGGATGAACATGAACGTGCCAAAGGTTCTCATTTTTAGCGGGGCAGTTGCTCTTGCATGCAGTCTTGACCGAGGGCTCCTAACAAAGGCGGTTATCTTTGGCGTTGCACGGAAACTAGGAAGAATAGGAGGGAAATTATAA MGLMEAFSVGGGLVMEIMLVITPIWTAFLLGLVIGWTWCPKWWKNLDKNTFDSFISKIGEFSAPSYSTSKGFPSIQSFTQFNLKFPSSSSQSTGDDSISANNQTSALQPSSSKLKGGEEHNVVNEGDLEHIYKLVEEKDGGPSWIQMMDRSTPTMNYRAWRRDPETGPPQYRSSTIFEDATPEMVRDFFWDDDFRPKWDNMLIQSQILEESQTTGTMIVQWVRKFPFFCSDREYIIGRRIWESERTYYCVTKGVPNSVPRKDKPRRVDLYYSSWCIRPVESRKGTGEMTACEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIDPGLRAYYKARAAGGPLSPAASMAQINTKVNPNYLKSLLTGDSLSVTEVVVPPEEKQQGGMNMNVPKVLIFSGAVALACSLDRGLLTKAVIFGVARKLGRIGGKL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22363.1 vs. NCBI nr
Match: gi|902163199|gb|KNA06795.1| (hypothetical protein SOVF_177840 [Spinacia oleracea]) HSP 1 Score: 875.9 bits (2262), Expect = 2.800e-251 Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1
BLAST of Spo22363.1 vs. NCBI nr
Match: gi|731371726|ref|XP_010666130.1| (PREDICTED: uncharacterized protein LOC104883331 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 699.9 bits (1805), Expect = 2.800e-198 Identity = 351/444 (79.05%), Postives = 389/444 (87.61%), Query Frame = 1
BLAST of Spo22363.1 vs. NCBI nr
Match: gi|802733517|ref|XP_012086635.1| (PREDICTED: uncharacterized protein LOC105645602 [Jatropha curcas]) HSP 1 Score: 527.7 bits (1358), Expect = 1.900e-146 Identity = 268/423 (63.36%), Postives = 320/423 (75.65%), Query Frame = 1
BLAST of Spo22363.1 vs. NCBI nr
Match: gi|590675045|ref|XP_007039336.1| (Polyketide cyclase/dehydrase and lipid transport superfamily protein [Theobroma cacao]) HSP 1 Score: 519.6 bits (1337), Expect = 5.100e-144 Identity = 264/424 (62.26%), Postives = 312/424 (73.58%), Query Frame = 1
BLAST of Spo22363.1 vs. NCBI nr
Match: gi|255555797|ref|XP_002518934.1| (PREDICTED: uncharacterized protein LOC8288867 [Ricinus communis]) HSP 1 Score: 510.0 bits (1312), Expect = 4.000e-141 Identity = 262/422 (62.09%), Postives = 318/422 (75.36%), Query Frame = 1
BLAST of Spo22363.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHR4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177840 PE=4 SV=1) HSP 1 Score: 875.9 bits (2262), Expect = 2.000e-251 Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 1
BLAST of Spo22363.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B5K9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_000100 PE=4 SV=1) HSP 1 Score: 699.9 bits (1805), Expect = 1.900e-198 Identity = 351/444 (79.05%), Postives = 389/444 (87.61%), Query Frame = 1
BLAST of Spo22363.1 vs. UniProtKB/TrEMBL
Match: A0A067JZ22_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20381 PE=4 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 1.300e-146 Identity = 268/423 (63.36%), Postives = 320/423 (75.65%), Query Frame = 1
BLAST of Spo22363.1 vs. UniProtKB/TrEMBL
Match: A0A061G3R2_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobroma cacao GN=TCM_015607 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 3.600e-144 Identity = 264/424 (62.26%), Postives = 312/424 (73.58%), Query Frame = 1
BLAST of Spo22363.1 vs. UniProtKB/TrEMBL
Match: B9RYW5_RICCO (Phosphatidylcholine transfer protein, putative OS=Ricinus communis GN=RCOM_1314180 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 2.800e-141 Identity = 262/422 (62.09%), Postives = 318/422 (75.36%), Query Frame = 1
BLAST of Spo22363.1 vs. TAIR (Arabidopsis)
Match: AT1G64720.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 461.5 bits (1186), Expect = 5.800e-130 Identity = 234/414 (56.52%), Postives = 292/414 (70.53%), Query Frame = 1
BLAST of Spo22363.1 vs. TAIR (Arabidopsis)
Match: AT5G54170.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 387.1 bits (993), Expect = 1.400e-107 Identity = 218/435 (50.11%), Postives = 276/435 (63.45%), Query Frame = 1
BLAST of Spo22363.1 vs. TAIR (Arabidopsis)
Match: AT4G14500.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 373.6 bits (958), Expect = 1.600e-103 Identity = 199/421 (47.27%), Postives = 273/421 (64.85%), Query Frame = 1
BLAST of Spo22363.1 vs. TAIR (Arabidopsis)
Match: AT3G23080.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 366.3 bits (939), Expect = 2.500e-101 Identity = 194/412 (47.09%), Postives = 266/412 (64.56%), Query Frame = 1
BLAST of Spo22363.1 vs. TAIR (Arabidopsis)
Match: AT1G55960.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 145.2 bits (365), Expect = 9.200e-35 Identity = 117/366 (31.97%), Postives = 181/366 (49.45%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22363.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22363.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22363.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo22363.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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