Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCACCTGGAGGCATAACATCTTCAGGGACATCGTCCCAGCAGCAGAACTCGAGTTNTAATTTGGTTTCTGTCACTCTTTTTCTTTTCTTTTTTTTAAAAAATCAAAAATGGCTTCACCTGGAGGCATAACATCTTCAGGGACATCGTCCCAGCAGCAGAACTCGAGTTCAGAANAAAATGGCTTCACCTGGAGGCATAACATCTTCAGGGACATCGTCCCAGCAGCAGAACTCGAGTTCAGAAGAGGATATGCAGATTCAGATCATGGATGAAAGGAAGAGGAAACGAATGCAGTCAAACCGCGAATCGGCTAGGAGGTCAAGGATGAGGAAGCAGCAACATTTGGATGATTTAATGGTTCAAGCTTCCAATGTCAGGAAAACCAATCATCAGCTTCTGAACAACATAAACATCACATCCCAACAATACTTGAAAATTGAAGCAGAAAATTCTGTACTCAGAGCACAAATGTCAGAACTCAGTAGCAGGTTACAGTCTCTAAATGAGATCATCAATGCACTAAACTCCTGCAATAACAATCAGAATCTGGGAATTTATGGGGGTGGTGGTGATGAACATCATCATGAAGAAGGGATCTTTCCAATTATTCCTGAGCCATTTACAACTGATAGCTTCCTGATGAATCCATGGGATTCTGCTACCTACTCAAACCAGCCAATCATGGCTTCAGCTGACATGTTCCAGTATTAG ATGGCTTCACCTGGAGGCATAACATCTTCAGGGACATCGTCCCAGCAGCAGAACTCGAGTTCAGAAGAGGATATGCAGATTCAGATCATGGATGAAAGGAAGAGGAAACGAATGCAGTCAAACCGCGAATCGGCTAGGAGGTCAAGGATGAGGAAGCAGCAACATTTGGATGATTTAATGGTTCAAGCTTCCAATGTCAGGAAAACCAATCATCAGCTTCTGAACAACATAAACATCACATCCCAACAATACTTGAAAATTGAAGCAGAAAATTCTGTACTCAGAGCACAAATGTCAGAACTCAGTAGCAGGTTACAGTCTCTAAATGAGATCATCAATGCACTAAACTCCTGCAATAACAATCAGAATCTGGGAATTTATGGGGGTGGTGGTGATGAACATCATCATGAAGAAGGGATCTTTCCAATTATTCCTGAGCCATTTACAACTGATAGCTTCCTGATGAATCCATGGGATTCTGCTACCTACTCAAACCAGCCAATCATGGCTTCAGCTGACATGTTCCAGTATTAG ATGGCTTCACCTGGAGGCATAACATCTTCAGGGACATCGTCCCAGCAGCAGAACTCGAGTTCAGAAGAGGATATGCAGATTCAGATCATGGATGAAAGGAAGAGGAAACGAATGCAGTCAAACCGCGAATCGGCTAGGAGGTCAAGGATGAGGAAGCAGCAACATTTGGATGATTTAATGGTTCAAGCTTCCAATGTCAGGAAAACCAATCATCAGCTTCTGAACAACATAAACATCACATCCCAACAATACTTGAAAATTGAAGCAGAAAATTCTGTACTCAGAGCACAAATGTCAGAACTCAGTAGCAGGTTACAGTCTCTAAATGAGATCATCAATGCACTAAACTCCTGCAATAACAATCAGAATCTGGGAATTTATGGGGGTGGTGGTGATGAACATCATCATGAAGAAGGGATCTTTCCAATTATTCCTGAGCCATTTACAACTGATAGCTTCCTGATGAATCCATGGGATTCTGCTACCTACTCAAACCAGCCAATCATGGCTTCAGCTGACATGTTCCAGTATTAG MASPGGITSSGTSSQQQNSSSEEDMQIQIMDERKRKRMQSNRESARRSRMRKQQHLDDLMVQASNVRKTNHQLLNNINITSQQYLKIEAENSVLRAQMSELSSRLQSLNEIINALNSCNNNQNLGIYGGGGDEHHHEEGIFPIIPEPFTTDSFLMNPWDSATYSNQPIMASADMFQY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22296.1 vs. NCBI nr
Match: gi|902178417|gb|KNA09135.1| (hypothetical protein SOVF_156330 [Spinacia oleracea]) HSP 1 Score: 332.8 bits (852), Expect = 3.700e-88 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1
BLAST of Spo22296.1 vs. NCBI nr
Match: gi|731321412|ref|XP_010671337.1| (PREDICTED: ocs element-binding factor 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 276.6 bits (706), Expect = 3.100e-71 Identity = 150/177 (84.75%), Postives = 163/177 (92.09%), Query Frame = 1
BLAST of Spo22296.1 vs. NCBI nr
Match: gi|697129596|ref|XP_009618859.1| (PREDICTED: ocs element-binding factor 1-like [Nicotiana tomentosiformis]) HSP 1 Score: 164.1 bits (414), Expect = 2.300e-37 Identity = 101/174 (58.05%), Postives = 127/174 (72.99%), Query Frame = 1
BLAST of Spo22296.1 vs. NCBI nr
Match: gi|255538740|ref|XP_002510435.1| (PREDICTED: bZIP transcription factor 53 [Ricinus communis]) HSP 1 Score: 159.8 bits (403), Expect = 4.300e-36 Identity = 108/177 (61.02%), Postives = 126/177 (71.19%), Query Frame = 1
BLAST of Spo22296.1 vs. NCBI nr
Match: gi|823161007|ref|XP_012480362.1| (PREDICTED: ocs element-binding factor 1-like [Gossypium raimondii]) HSP 1 Score: 157.5 bits (397), Expect = 2.100e-35 Identity = 107/181 (59.12%), Postives = 131/181 (72.38%), Query Frame = 1
BLAST of Spo22296.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPF9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_156330 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 2.600e-88 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1
BLAST of Spo22296.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKP2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050990 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.200e-71 Identity = 150/177 (84.75%), Postives = 163/177 (92.09%), Query Frame = 1
BLAST of Spo22296.1 vs. UniProtKB/TrEMBL
Match: B9R7Z2_RICCO (Ocs element-binding factor, putative OS=Ricinus communis GN=RCOM_1595650 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.000e-36 Identity = 108/177 (61.02%), Postives = 126/177 (71.19%), Query Frame = 1
BLAST of Spo22296.1 vs. UniProtKB/TrEMBL
Match: A0A0D2NI13_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G245700 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 3.300e-35 Identity = 103/174 (59.20%), Postives = 127/174 (72.99%), Query Frame = 1
BLAST of Spo22296.1 vs. UniProtKB/TrEMBL
Match: B9H0U0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s16560g PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 4.300e-35 Identity = 107/177 (60.45%), Postives = 127/177 (71.75%), Query Frame = 1
BLAST of Spo22296.1 vs. ExPASy Swiss-Prot
Match: BZP11_ARATH (bZIP transcription factor 11 OS=Arabidopsis thaliana GN=BZIP11 PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 6.800e-26 Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 1
BLAST of Spo22296.1 vs. ExPASy Swiss-Prot
Match: BZIP2_ARATH (bZIP transcription factor 2 OS=Arabidopsis thaliana GN=BZIP2 PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.900e-24 Identity = 84/177 (47.46%), Postives = 111/177 (62.71%), Query Frame = 1
BLAST of Spo22296.1 vs. ExPASy Swiss-Prot
Match: BZP44_ARATH (bZIP transcription factor 44 OS=Arabidopsis thaliana GN=BZIP44 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 6.400e-24 Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 1
BLAST of Spo22296.1 vs. ExPASy Swiss-Prot
Match: BZP53_ARATH (bZIP transcription factor 53 OS=Arabidopsis thaliana GN=BZIP53 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-15 Identity = 66/166 (39.76%), Postives = 96/166 (57.83%), Query Frame = 1
BLAST of Spo22296.1 vs. ExPASy Swiss-Prot
Match: OCS1_MAIZE (Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 5.200e-10 Identity = 53/169 (31.36%), Postives = 81/169 (47.93%), Query Frame = 1
BLAST of Spo22296.1 vs. TAIR (Arabidopsis)
Match: AT4G34590.1 (G-box binding factor 6) HSP 1 Score: 118.6 bits (296), Expect = 3.800e-27 Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 1
BLAST of Spo22296.1 vs. TAIR (Arabidopsis)
Match: AT2G18160.1 (basic leucine-zipper 2) HSP 1 Score: 113.2 bits (282), Expect = 1.600e-25 Identity = 84/177 (47.46%), Postives = 111/177 (62.71%), Query Frame = 1
BLAST of Spo22296.1 vs. TAIR (Arabidopsis)
Match: AT1G75390.1 (basic leucine-zipper 44) HSP 1 Score: 112.1 bits (279), Expect = 3.600e-25 Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 1
BLAST of Spo22296.1 vs. TAIR (Arabidopsis)
Match: AT3G62420.1 (basic region/leucine zipper motif 53) HSP 1 Score: 84.7 bits (208), Expect = 6.100e-17 Identity = 66/166 (39.76%), Postives = 96/166 (57.83%), Query Frame = 1
BLAST of Spo22296.1 vs. TAIR (Arabidopsis)
Match: AT1G13600.1 (basic leucine-zipper 58) HSP 1 Score: 66.2 bits (160), Expect = 2.300e-11 Identity = 50/123 (40.65%), Postives = 71/123 (57.72%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22296.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22296.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22296.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo22296.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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