Spo22275 (gene)

Overview
NameSpo22275
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGRF1-interacting factor 3
Locationchr3 : 6876322 .. 6880883 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAAAAATATTAACAATACGGAGTATTGGAAAAGTAGATTGATGTAAACTTCAATTTGGTCTCGTCTCCTACTGCCGCCTCTTTCTCTCTCTTCTCCCCCAACATTTCCTCTGCCAATCCCTGGACTTTTTGCTCCCCCTTTTTTAATTAGGTTTTCATTGCTTTCTTAATACTGTATTCCGCACTCTTCACTATTCAAGATAAACACTGCTACCAAGCAAGAGAAAGATGCAGCAACAGCAACATCAACAGCAGCAGCAACTACAGCAGCAACAACAAATGTTCAACATCCCGGCTTCGCAACCCACAATCATCATTTCCACCGAACAAATTCAAAAGGTTGTTTATTTAAACCCCTCTTTTGTTCTTAAAATCTGATTCTGGGTTCTTGATTTTTTGAATTTAAAATATCTAAAAATAATGTTTCAGTGATTTTTTACTTCACTGGGCAATTGGGCATTTCATGTTTGTTTTTCTTTCTTTCTATTCAATTTTCTGGTTTAATTGGGTTTTTAGTTGATTAGTGAGTATTTATTTCAACTGTGATTCAGTATCTTGATGAGAACAAGCAGCTGATTTTGGCAATTATGGAAAGTCAGAACATGGGGAAAATCAATGAATGTGCCCAGTAAGTTGCTTTAATGTCCAATTTAAGTTTCGTACTTAATTTTGATTGCAATTTTGGCATTCTTTCTGCTTTAGTTGGTTTAATTATTATAAATTTTGGGTAAATTGAGTCATTAATATGCTGTTAATTGTAATTAGAGTTGTAACATGAATCTTGGTTCCTGAGAAACCGGAGTTGTGCTGCATTTTTCAGTTGATTATGTTCTTTGACAGTTCTTTTCTTGCTTAGGGTAATCCAAAGAGGTCTTGTAGAGTCTGGGAAATTGGTATTAGCCATTTAGCCTTTTGCAGTTTACACACTAGGTGAATTTGATCATTGGCTATGTATCTAGTTTTGAGAGGAAGGCTTAATGTCATTTTTATTTTCTATATGTACTCGTTTTAGCTTATGGCAACATAAATGTTTTACAAGAATGTGAATGTATCCGAATCGGGATTACACGATGAATGGGATTTGGTGAACTATGAGCTTAGTTAAATGTTGCGGGAGTAATAATTTTGATGCTGCATATGTGTGAAAGAAGTTCTAGAAATTGGATGTCCGCCTTCTAGATTTTTGCAGCAAAATGGATGAAGTGGCTACTGCCTAATAAGTGTATACAATTATACTTATAGCTAGAAGAAAGTAACACCATTTTAAGACATCTATATCGCTGTGTGAGAGAAATAGAGGGTATATTCAAACTCAAATGCAAGCTTGAACTGCTTGAAGCATAAATATGCTAATTGGCTCAGATTTTGGAACTTAGTATTTGAACCAAATGATAGTGAAAGCATGCCCCTTCATAACTATGTGTTTGGATAGCAAGATAGAAGTGAAAGGAAGGGGAGGGAAAGATGAGGAAGGGGAGAGGAAAGAAAGCGAGGGGGAAGATGAGCTCCATTTCTCCTCAAAATCTCTCCAATTTTAAAGGGATGGTATTTATAAAGTAGGGAGGGAAAATGGATCCCTCCCTTTCCTTTCCTTTCCTTCCCCCAACCTTTTATCCAAAAAAGGGATCTTGTTCCCCTCCCTTTCCCTTCCCTCCCCTTTCTCTCCATTTTTGCTTATCCAAACAAAGTGTTAGAGAATAGATAGGGTACATAAGCAGAAAGACATTGTGGTTTCAGGCTATTAGGATGCACATATGTCTCAGCTTTCAAGCAGCCTTCATTTTTCTGTAATAAAAATTACCGTTTGTTTTATATCTGAGAAAATCTTACCTTCATATGAAAGATGAGTAATAGAAACTGTTCTCGCATGGAATGGTAGATAATGTATACTTCGGTATATTGTATCTGTGCCTTTGTGACGCCTGGGTTCTCTCTTCAAGATTTATGTTAATCGATTTTGTGAGGCTTTATTTAGTTTTTAAGATAATTTGTTGAGTACACTTAATAAATATTCTGTGATAGATGTATAATTTTTAAGCTTATGCGTACAGTGTACTAACTAAGAAGATCCATGAAATTTTCCCCTTCATATTAGTTGTTAAGAGGAGGGTTAGTTGATTGGTTTTGTTACCAAGGATCCAGTGAAAATGGAAATGCTATGTAAATCGAGTTTCATAGGTTAGTCGATTTCCCTCCCATCAAGGGTCTGATTGAAACACCCTCTCTGCACTAGCAAGGGCAACACGTGAATTGACTTTTATATTCATTACCTTTCCATCGGTTGTGGCCTCATTTGAGTCACTTGACTTATACTTCAACAACAATATCGAAACCTTAATCCCAATGTTGGGGTCGGCTACAGGAACCAAGGTTTTATCCCCATAGTCATTATTTGCCAAAAATGTTTGCCCAAAGATTTGAACCACATCTAGAATACACTAAATGTCTTACCATCTTAGCCAGTTATTAGTCATGTTATATCTGTCCACATTCATATACAAATAGATATTTAATCTTAGAAGAAAAAAGGGGAATCTAGACCAATTTAGTAATATATCCCTTTCACTGATTAGTTAGATGTATAATTATGTTCAAATTCTAATCACACATTAAGTCATCAATTCAGTTTTAGTCTATACTTACTGTTCAATAATTTTGAGGATTTCAACCTCTTTTGATGTGGTAACGACTAACAAGGGCTCCATCCCAACTTTTTTAAGTGCAAATAACAAAATACATTACTCAGTAAGAAATTGGGGCAACGCCCGGGTCACCGTCACACACTAGGTTTTACCATGCATATTCTACATTGTTGGTTGCAACACTTGCAAGCTCAAGTGCTGTCTTCGCATACTATTCAAATCAAACCTTGCTTAAAATTTGGCGTTTTTCTTATAGCATAACTTTGCAAAGTAGGATCTTGTTACACTAATACACTGTCAGTATTTTTTTCTCAGTTCACTTTTTGGCGTTTTTCTTGAAGCATAACCATGCGATGTAGGATCTTGTTACACTGTCAACATTATTTTTCTTAGTTCTCTTAATGGCTTAATAACTGATTATCAAACCTCTTTCCCTCACTCACTTAATCTTCCTTAAATTACGTACGTAAAAGATTATTTCATTCCTCAGTGCTTTTCTGCCCTGTTTTGAAGTTTTTGAGCTAAAGAAATTCAGCAGTGACCCTTAGCAGCTTGTTTCCGAAGTTCCAATAGCCATCTAGTTAAATTTGGAGCCTTACCACATTGATATTTATGTCAAATTCACCAGTGAGAATAGCTAGCTATATGTGCTATGTTATGTGTGCTGCATACCTGCGTTATAAGTTTTTGCAGGATGGAAGTTAAAAGTTAAAACAAGAACAAGATCACTCTGTAACACTCCACTTGGTGCACTCGAATTGGATAGTTACCAGCGGTTACCTCCTCAGGATGTTTCTTTAACAGGCTTAGGATTTTAGTCCATGACCTGTAATCTATGAGATGCAGATCTATGCTTCTTACCACTAAACCAACCTCAAATTTAATGAAAATGCTTAATTATTTCGCGTTCTAGAATCTGGCTTTCAAGTTATGGTAACTGATATTTATCTGTGATTCAATTTGTGGTCATTTTTTCTACTTAAAATTTAGGCAAATAAGTAATTTGTCACTTATTTTCTAATTTAAACAATTTAGGTATCAAGCTCAGCTACAGAAAAACTTAATGTACTTGGCTGCCATTGCTGATGCTCAACCACCAGCATCAACAGGACCTTCTCAGCCTCAGGTATCCTACCTATCTTTCCTGTGATGTTATACATTTATCTAACCTTCTGCTCTTAAAACGATTTCAAAATTCCTCAGATTCCCATGCAATCGTCCATTCCTCAAGGCCCGTTCATGCCACCTCCTAAATCTGCAGCTAGTCCGCAGCAGCAAACAGGTCCCAGAATGCCCTTTGTCCTGCAATCGTTTGATCAACAGTCACCCCAAATGCAATACCAACAGTCTATGTCAGGTTCGATGGGGATGAGAATGGGAGGTAACAATGGTTTACGCCCTGCTGCTGTCCACACTGGATTCGGAGGTCCGACACATGTGATGGATTCACGCAACAGACAACAAGATGGTTCTGAAGCCGGTCCTGGTGATGATCATGGGAAGTGATCCGGTAAGGTGGGCCCCGAGAGGGTCGTGGGACCCACTGGTTTTGACCCGGCAGGTGACGCTGGGTTAAAATAGGTGAATTTGGTATTGTTTTTGCCAAGTTCAATAATTTTGCATAGAAGGGTTTGCTGTGTACGTCAGGCAATTGCAGGCGGTTACGCCTGTATTAGGAGAGATGGGTTAGATGGTAATGTGTCAATGCTAGATATATTTAAAGAATCAAAGATGGTTTGTGGTTGTCCTTTGGTATGTTGCAGCCAGAACAAACATTTCATGTATGCGTAACGATATATTGTTCATAGACTCACTTCACAGTTAAATGATGTTGGTAATTAGTGATTTCCCCTGTTGGTGAGAAATAGAGAGCATTAATCAGGAGTTTTTATCCTAGTTGAATGACTAAAAAGTAAAAA

mRNA sequence

TGAAAAAATATTAACAATACGGAGTATTGGAAAAGTAGATTGATGTAAACTTCAATTTGGTCTCGTCTCCTACTGCCGCCTCTTTCTCTCTCTTCTCCCCCAACATTTCCTCTGCCAATCCCTGGACTTTTTGCTCCCCCTTTTTTAATTAGGTTTTCATTGCTTTCTTAATACTGTATTCCGCACTCTTCACTATTCAAGATAAACACTGCTACCAAGCAAGAGAAAGATGCAGCAACAGCAACATCAACAGCAGCAGCAACTACAGCAGCAACAACAAATGTTCAACATCCCGGCTTCGCAACCCACAATCATCATTTCCACCGAACAAATTCAAAAGTATCTTGATGAGAACAAGCAGCTGATTTTGGCAATTATGGAAAGTCAGAACATGGGGAAAATCAATGAATGTGCCCAGTATCAAGCTCAGCTACAGAAAAACTTAATGTACTTGGCTGCCATTGCTGATGCTCAACCACCAGCATCAACAGGACCTTCTCAGCCTCAGATTCCCATGCAATCGTCCATTCCTCAAGGCCCGTTCATGCCACCTCCTAAATCTGCAGCTAGTCCGCAGCAGCAAACAGGTCCCAGAATGCCCTTTGTCCTGCAATCGTTTGATCAACAGTCACCCCAAATGCAATACCAACAGTCTATGTCAGGTTCGATGGGGATGAGAATGGGAGGTAACAATGGTTTACGCCCTGCTGCTGTCCACACTGGATTCGGAGGTCCGACACATGTGATGGATTCACGCAACAGACAACAAGATGGTTCTGAAGCCGGTCCTGGTGATGATCATGGGAAGTGATCCGGTAAGGTGGGCCCCGAGAGGGTCGTGGGACCCACTGGTTTTGACCCGGCAGGTGACGCTGGGTTAAAATAGGTGAATTTGGTATTGTTTTTGCCAAGTTCAATAATTTTGCATAGAAGGGTTTGCTGTGTACGTCAGGCAATTGCAGGCGGTTACGCCTGTATTAGGAGAGATGGGTTAGATGGTAATGTGTCAATGCTAGATATATTTAAAGAATCAAAGATGGTTTGTGGTTGTCCTTTGGTATGTTGCAGCCAGAACAAACATTTCATGTATGCGTAACGATATATTGTTCATAGACTCACTTCACAGTTAAATGATGTTGGTAATTAGTGATTTCCCCTGTTGGTGAGAAATAGAGAGCATTAATCAGGAGTTTTTATCCTAGTTGAATGACTAAAAAGTAAAAA

Coding sequence (CDS)

ATGCAGCAACAGCAACATCAACAGCAGCAGCAACTACAGCAGCAACAACAAATGTTCAACATCCCGGCTTCGCAACCCACAATCATCATTTCCACCGAACAAATTCAAAAGTATCTTGATGAGAACAAGCAGCTGATTTTGGCAATTATGGAAAGTCAGAACATGGGGAAAATCAATGAATGTGCCCAGTATCAAGCTCAGCTACAGAAAAACTTAATGTACTTGGCTGCCATTGCTGATGCTCAACCACCAGCATCAACAGGACCTTCTCAGCCTCAGATTCCCATGCAATCGTCCATTCCTCAAGGCCCGTTCATGCCACCTCCTAAATCTGCAGCTAGTCCGCAGCAGCAAACAGGTCCCAGAATGCCCTTTGTCCTGCAATCGTTTGATCAACAGTCACCCCAAATGCAATACCAACAGTCTATGTCAGGTTCGATGGGGATGAGAATGGGAGGTAACAATGGTTTACGCCCTGCTGCTGTCCACACTGGATTCGGAGGTCCGACACATGTGATGGATTCACGCAACAGACAACAAGATGGTTCTGAAGCCGGTCCTGGTGATGATCATGGGAAGTGA

Protein sequence

MQQQQHQQQQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTGPRMPFVLQSFDQQSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQDGSEAGPGDDHGK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo22275.1Spo22275.1mRNA


Homology
[Close]
BLAST of Spo22275.1 vs. NCBI nr
Match: gi|902187980|gb|KNA11031.1| (hypothetical protein SOVF_138910 [Spinacia oleracea])

HSP 1 Score: 358.2 bits (918), Expect = 8.900e-96
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 

		  

Query: 1   MQQQQHQQQQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINE 60
           MQQQQHQQQQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINE
Sbjct: 1   MQQQQHQQQQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINE 60

Query: 61  CAQYQAQLQKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTG 120
           CAQYQAQLQKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTG
Sbjct: 61  CAQYQAQLQKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTG 120

Query: 121 PRMPFVLQSFDQQSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQ 180
           PRMPFVLQSFDQQSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQ
Sbjct: 121 PRMPFVLQSFDQQSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQ 180

Query: 181 DGSEAGPGDDHGK 194
           DGSEAGPGDDHGK
Sbjct: 181 DGSEAGPGDDHGK 193
[Close]
BLAST of Spo22275.1 vs. NCBI nr
Match: gi|731371792|ref|XP_010666152.1| (PREDICTED: GRF1-interacting factor 2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 255.4 bits (651), Expect = 8.100e-65
Identity = 148/188 (78.72%), Postives = 160/188 (85.11%), Query Frame = 1 

		  

Query: 13  QQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKNL 72
           QQ  QMFN P SQPTI  +TEQIQKYLDENKQLILAIMESQN GK+NECAQYQAQLQKNL
Sbjct: 3   QQSPQMFNHPPSQPTI--TTEQIQKYLDENKQLILAIMESQNSGKMNECAQYQAQLQKNL 62

Query: 73  MYLAAIADAQPPASTGPSQ-----PQIPMQSSIPQGPFMPPPKSAASPQQQTGPRMPFVL 132
           MYLAAIADAQPPA TGPSQ      Q+PMQS+IPQGPFMPPPK A +P QQTGPR+PF L
Sbjct: 63  MYLAAIADAQPPAPTGPSQSQPQNSQMPMQSTIPQGPFMPPPKPAVTP-QQTGPRLPFAL 122

Query: 133 QSFDQQSP--QMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQDGSEA 192
           QSFDQQSP  QMQYQQSM+GSMGMRMGGNN LRP ++ TG+G PTH MD+RNR QDGS+A
Sbjct: 123 QSFDQQSPHMQMQYQQSMAGSMGMRMGGNNVLRP-SIQTGYGAPTHFMDARNR-QDGSDA 182

Query: 193 GPGDDHGK 194
             GDDHGK
Sbjct: 183 SLGDDHGK 185
[Close]
BLAST of Spo22275.1 vs. NCBI nr
Match: gi|225455248|ref|XP_002272754.1| (PREDICTED: GRF1-interacting factor 2 [Vitis vinifera])

HSP 1 Score: 156.4 bits (394), Expect = 5.100e-35
Identity = 103/187 (55.08%), Postives = 126/187 (67.38%), Query Frame = 1 

		  

Query: 13  QQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKNL 72
           QQ  QM NI  S P   I+TEQIQKYLDENKQLILAI+E+QN+GK+ ECAQYQAQLQKNL
Sbjct: 3   QQPPQMMNIAPSFPPTAITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNL 62

Query: 73  MYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQ--QTGPRMPFVLQSF 132
           +YLAAIADAQPPA T P  PQ+P+  ++ QG +M  P++AA+ QQ    G ++PF L   
Sbjct: 63  IYLAAIADAQPPAPTVP--PQMPIHHAMQQGHYMQHPQAAAAQQQPGMFGAKLPFQLSDQ 122

Query: 133 DQQSP----QMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQDGSEAG 192
            QQ       +Q QQ + G MGMR   NNG+   A+ TG G  + +MD R  + DGSE G
Sbjct: 123 QQQQQHHLLHLQQQQPIQGLMGMRPIINNGMH-QAMQTGLGALSGLMDVRGSKPDGSEVG 182

Query: 193 PGDDHGK 194
            GD  GK
Sbjct: 183 SGDGQGK 186
[Close]
BLAST of Spo22275.1 vs. NCBI nr
Match: gi|302143965|emb|CBI23070.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 155.2 bits (391), Expect = 1.100e-34
Identity = 100/182 (54.95%), Postives = 123/182 (67.58%), Query Frame = 1 

		  

Query: 18  MFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKNLMYLAA 77
           M NI  S P   I+TEQIQKYLDENKQLILAI+E+QN+GK+ ECAQYQAQLQKNL+YLAA
Sbjct: 1   MMNIAPSFPPTAITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNLIYLAA 60

Query: 78  IADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQ--QTGPRMPFVLQSFDQQSP 137
           IADAQPPA T P  PQ+P+  ++ QG +M  P++AA+ QQ    G ++PF L    QQ  
Sbjct: 61  IADAQPPAPTVP--PQMPIHHAMQQGHYMQHPQAAAAQQQPGMFGAKLPFQLSDQQQQQQ 120

Query: 138 ----QMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQDGSEAGPGDDH 194
                +Q QQ + G MGMR   NNG+   A+ TG G  + +MD R  + DGSE G GD  
Sbjct: 121 HHLLHLQQQQPIQGLMGMRPIINNGMH-QAMQTGLGALSGLMDVRGSKPDGSEVGSGDGQ 179
[Close]
BLAST of Spo22275.1 vs. NCBI nr
Match: gi|645254509|ref|XP_008233072.1| (PREDICTED: GRF1-interacting factor 3 [Prunus mume])

HSP 1 Score: 137.5 bits (345), Expect = 2.500e-29
Identity = 104/200 (52.00%), Postives = 125/200 (62.50%), Query Frame = 1 

		  

Query: 12  LQQQQQMFNI-PASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQK 71
           +QQ QQM  + P S P   I+TEQIQKYLDENK+LILAI+++QN+GK+ ECAQYQAQLQK
Sbjct: 1   MQQPQQMIPVMPTSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQK 60

Query: 72  NLMYLAAIADAQPPASTGPSQ--PQIPMQSSIPQGPFMPPPKSAASPQQQ--TGPRMPFV 131
           NLMYLAAIADAQP A T P+Q  P   MQ +   G +M  P++AA  QQQ    P+MP  
Sbjct: 61  NLMYLAAIADAQPQAPTVPAQMAPHPAMQQA---GYYMQHPQAAAMAQQQGIFPPKMPLH 120

Query: 132 LQSFDQ-----QSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHT------GFGGPTHVMDS 191
             +  Q     Q    Q+QQ+M G MGMR GG NG+ P+  HT      G GGPT     
Sbjct: 121 FNNPHQMHDAAQQLHQQHQQAMQGQMGMRAGGANGM-PSMHHTEATLGGGSGGPTSAGGG 180
[Close]
BLAST of Spo22275.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QWX9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138910 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 6.200e-96
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 

		  

Query: 1   MQQQQHQQQQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINE 60
           MQQQQHQQQQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINE
Sbjct: 1   MQQQQHQQQQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINE 60

Query: 61  CAQYQAQLQKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTG 120
           CAQYQAQLQKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTG
Sbjct: 61  CAQYQAQLQKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTG 120

Query: 121 PRMPFVLQSFDQQSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQ 180
           PRMPFVLQSFDQQSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQ
Sbjct: 121 PRMPFVLQSFDQQSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQ 180

Query: 181 DGSEAGPGDDHGK 194
           DGSEAGPGDDHGK
Sbjct: 181 DGSEAGPGDDHGK 193
[Close]
BLAST of Spo22275.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B5N0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_000290 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.600e-65
Identity = 148/188 (78.72%), Postives = 160/188 (85.11%), Query Frame = 1 

		  

Query: 13  QQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKNL 72
           QQ  QMFN P SQPTI  +TEQIQKYLDENKQLILAIMESQN GK+NECAQYQAQLQKNL
Sbjct: 3   QQSPQMFNHPPSQPTI--TTEQIQKYLDENKQLILAIMESQNSGKMNECAQYQAQLQKNL 62

Query: 73  MYLAAIADAQPPASTGPSQ-----PQIPMQSSIPQGPFMPPPKSAASPQQQTGPRMPFVL 132
           MYLAAIADAQPPA TGPSQ      Q+PMQS+IPQGPFMPPPK A +P QQTGPR+PF L
Sbjct: 63  MYLAAIADAQPPAPTGPSQSQPQNSQMPMQSTIPQGPFMPPPKPAVTP-QQTGPRLPFAL 122

Query: 133 QSFDQQSP--QMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQDGSEA 192
           QSFDQQSP  QMQYQQSM+GSMGMRMGGNN LRP ++ TG+G PTH MD+RNR QDGS+A
Sbjct: 123 QSFDQQSPHMQMQYQQSMAGSMGMRMGGNNVLRP-SIQTGYGAPTHFMDARNR-QDGSDA 182

Query: 193 GPGDDHGK 194
             GDDHGK
Sbjct: 183 SLGDDHGK 185
[Close]
BLAST of Spo22275.1 vs. UniProtKB/TrEMBL
Match: F6H760_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01110 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.600e-35
Identity = 103/187 (55.08%), Postives = 126/187 (67.38%), Query Frame = 1 

		  

Query: 13  QQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKNL 72
           QQ  QM NI  S P   I+TEQIQKYLDENKQLILAI+E+QN+GK+ ECAQYQAQLQKNL
Sbjct: 3   QQPPQMMNIAPSFPPTAITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNL 62

Query: 73  MYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQ--QTGPRMPFVLQSF 132
           +YLAAIADAQPPA T P  PQ+P+  ++ QG +M  P++AA+ QQ    G ++PF L   
Sbjct: 63  IYLAAIADAQPPAPTVP--PQMPIHHAMQQGHYMQHPQAAAAQQQPGMFGAKLPFQLSDQ 122

Query: 133 DQQSP----QMQYQQSMSGSMGMRMGGNNGLRPAAVHTGFGGPTHVMDSRNRQQDGSEAG 192
            QQ       +Q QQ + G MGMR   NNG+   A+ TG G  + +MD R  + DGSE G
Sbjct: 123 QQQQQHHLLHLQQQQPIQGLMGMRPIINNGMH-QAMQTGLGALSGLMDVRGSKPDGSEVG 182

Query: 193 PGDDHGK 194
            GD  GK
Sbjct: 183 SGDGQGK 186
[Close]
BLAST of Spo22275.1 vs. UniProtKB/TrEMBL
Match: D9ZJ01_MALDO (GRF domain class transcription factor OS=Malus domestica GN=GRF5 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.200e-29
Identity = 96/193 (49.74%), Postives = 120/193 (62.18%), Query Frame = 1 

		  

Query: 12  LQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKN 71
           +QQ  QM  +  S P   I+TEQIQKYLD+NK+LILAI+++QN+GK+ ECAQYQA LQKN
Sbjct: 1   MQQPPQMIPVMPSFPPTNITTEQIQKYLDDNKKLILAILDNQNLGKLAECAQYQALLQKN 60

Query: 72  LMYLAAIADAQPPASTGPSQ--PQIPMQSSIPQGPFMPPPKSAASPQQQ--TGPRMPFVL 131
           LMYLAAIADAQP A   P Q  P   MQ +   G +M  P++AA  QQQ    P+MP   
Sbjct: 61  LMYLAAIADAQPQAPAAPPQMAPHPAMQQA---GYYMQHPQAAAMAQQQGIFSPKMPMQF 120

Query: 132 QSFDQQSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHT------GFGGPTHVMDSRN---- 191
            +  Q     Q+QQ+M G MGMR GG NG+ P+ +HT      G GGP    D  +    
Sbjct: 121 NNMHQMHDPQQHQQAMQGQMGMRPGGPNGM-PSMLHTEATHGGGSGGPNSAGDPNDGRGG 180
[Close]
BLAST of Spo22275.1 vs. UniProtKB/TrEMBL
Match: M5X0H7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011344mg PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.900e-29
Identity = 104/200 (52.00%), Postives = 125/200 (62.50%), Query Frame = 1 

		  

Query: 12  LQQQQQMFNI-PASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQK 71
           +QQ QQM  + P S P   I+TEQIQKYLDENK+LILAI+++QN+GK+ ECAQYQAQLQK
Sbjct: 1   MQQPQQMIPVMPTSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQK 60

Query: 72  NLMYLAAIADAQPPASTGPSQ--PQIPMQSSIPQGPFMPPPKSAASPQQQ--TGPRMPFV 131
           NLMYLAAIADAQP A T P+Q  P   MQ +   G +M  P++AA  QQQ    P+MP  
Sbjct: 61  NLMYLAAIADAQPQAPTVPAQMAPHPAMQQA---GYYMQHPQAAAMAQQQGIFPPKMPLQ 120

Query: 132 LQSFDQ-----QSPQMQYQQSMSGSMGMRMGGNNGLRPAAVHT------GFGGPTHVMDS 191
             +  Q     Q    Q+QQ+M G MGMR GG NG+ P+  HT      G GGPT     
Sbjct: 121 FNNPHQMHDAAQQLHQQHQQAMQGQMGMRAGGANGM-PSMHHTEATLGGGSGGPTSGGGG 180
[Close]
BLAST of Spo22275.1 vs. ExPASy Swiss-Prot
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.700e-26
Identity = 99/198 (50.00%), Postives = 118/198 (59.60%), Query Frame = 1 

		  

Query: 11  QLQQQQQMFN-IPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQ 70
           Q QQ  QMF  +P+  P   I+TEQIQKYLDENK+LI+AIME+QN+GK+ ECAQYQA LQ
Sbjct: 2   QQQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQ 61

Query: 71  KNLMYLAAIADAQPPAST-GPS-QPQIPMQSSIPQGPFMPP----PKSAASPQQQTGPRM 130
           KNLMYLAAIADAQPP  T GPS    +  Q + P     PP        ASP     PR 
Sbjct: 62  KNLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQASPAGIFAPRG 121

Query: 131 PF----VLQSFDQQSPQMQYQQSMSGSMGMRMGG--NNGLRPA--AVHTGFGGPTHVMDS 190
           P      LQ  D Q  Q  +QQ+M G MG+R  G  NNG++ A     TG GG   +   
Sbjct: 122 PLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGL--- 181

Query: 191 RNRQQDGSEAGPGDDHGK 194
           R  +QDG++ G G D GK
Sbjct: 182 RGGKQDGAD-GQGKDDGK 195
[Close]
BLAST of Spo22275.1 vs. ExPASy Swiss-Prot
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.400e-16
Identity = 77/191 (40.31%), Postives = 97/191 (50.79%), Query Frame = 1 

		  

Query: 12  LQQQQQMFN--IPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQ 71
           +QQ  QM    +P+  PT  I+TEQIQKYLDENK+LI+AI+E+QN+GK+ ECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 72  KNLMYLAAIADA--QPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTGPRMPFVL 131
           KNLMYLAAIADA  QPPA+T  S    P   +       PPP       Q  G       
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 132 QSFDQQSPQMQY---QQSMSGSMGMRMGGNNGL---RPAAVHTGFGGPTHVMDSRNRQQD 191
             F  + P +Q+    Q +     +      G    RP  ++    G  H M        
Sbjct: 121 GIFPPRGP-LQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNN-NGLQHQMHHHETALA 180

Query: 192 GSEAGPGDDHG 193
            + AGP D  G
Sbjct: 181 ANNAGPNDASG 189
[Close]
BLAST of Spo22275.1 vs. ExPASy Swiss-Prot
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.800e-9
Identity = 75/203 (36.95%), Postives = 98/203 (48.28%), Query Frame = 1 

		  

Query: 9   QQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQL 68
           QQ L Q Q M    A      ++++ IQ+YLDENK LIL I+ESQN GK++ECA+ QA+L
Sbjct: 2   QQHLMQMQPMM---AGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARL 61

Query: 69  QKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTGPRMPFVLQ 128
           Q+NLMYLAAIAD+QP   +  SQ       S   G       S    QQQ   +     Q
Sbjct: 62  QRNLMYLAAIADSQPQPPSVHSQ-----YGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQ 121

Query: 129 SF-------------DQQSP--QMQYQQSMSGSMGMRM----GGNNGLRPAAVHTGFGGP 188
           S               QQ P   +Q+QQ     +GM      GG++GL    +  G  G 
Sbjct: 122 SLMAARSSMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLH---ILQGEAGG 181

Query: 189 THVMDSRNRQQDGSEAGPGDDHG 193
            H    R + + GS  G G+  G
Sbjct: 182 FHDF-GRGKPEMGS-GGGGEGRG 191
[Close]
BLAST of Spo22275.1 vs. ExPASy Swiss-Prot
Match: SSXT_HUMAN (Protein SSXT OS=Homo sapiens GN=SS18 PE=1 SV=3)

HSP 1 Score: 62.8 bits (151), Expect = 4.800e-9
Identity = 55/159 (34.59%), Postives = 72/159 (45.28%), Query Frame = 1 

		  

Query: 30  ISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKNLMYLAAIADAQ------- 89
           I+   IQK LD+N  LI  IM+SQN GK +EC+QYQ  L  NL+YLA IAD+        
Sbjct: 16  ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 75

Query: 90  --PPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQT---GPRMPFVLQSFDQQSPQM 149
             PP    P  P    QS  P     PPP+S   P       GP  P +    + Q P  
Sbjct: 76  PAPPTQNMPMGPGGMNQSGPP-----PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGP 135

Query: 150 QYQQSMS-GSMGMRMGGNNGLRPAAVHTGFGGPTHVMDS 176
            +      G   + M  ++   P++ H   GG  H + S
Sbjct: 136 NHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPS 169
[Close]
BLAST of Spo22275.1 vs. ExPASy Swiss-Prot
Match: SSXT_PONAB (Protein SSXT OS=Pongo abelii GN=SS18 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.800e-9
Identity = 55/159 (34.59%), Postives = 72/159 (45.28%), Query Frame = 1 

		  

Query: 30  ISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQKNLMYLAAIADAQ------- 89
           I+   IQK LD+N  LI  IM+SQN GK +EC+QYQ  L  NL+YLA IAD+        
Sbjct: 16  ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 75

Query: 90  --PPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQT---GPRMPFVLQSFDQQSPQM 149
             PP    P  P    QS  P     PPP+S   P       GP  P +    + Q P  
Sbjct: 76  PAPPTQNMPMGPGGMNQSGPP-----PPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGP 135

Query: 150 QYQQSMS-GSMGMRMGGNNGLRPAAVHTGFGGPTHVMDS 176
            +      G   + M  ++   P++ H   GG  H + S
Sbjct: 136 NHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPS 169
[Close]
BLAST of Spo22275.1 vs. TAIR (Arabidopsis)
Match: AT1G01160.2 (GRF1-interacting factor 2)

HSP 1 Score: 103.2 bits (256), Expect = 1.800e-22
Identity = 84/170 (49.41%), Postives = 100/170 (58.82%), Query Frame = 1 

		  

Query: 38  YLDENKQLILAIMESQNMGKINECAQYQAQLQKNLMYLAAIADAQPPAST-GPS-QPQIP 97
           YLDENK+LI+AIME+QN+GK+ ECAQYQA LQKNLMYLAAIADAQPP  T GPS    + 
Sbjct: 64  YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 123

Query: 98  MQSSIPQGPFMPP----PKSAASPQQQTGPRMPF----VLQSFDQQSPQMQYQQSMSGSM 157
            Q + P     PP        ASP     PR P      LQ  D Q  Q  +QQ+M G M
Sbjct: 124 AQMATPHSGMQPPSYFMQHPQASPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQAMQGHM 183

Query: 158 GMRMGG--NNGLRPA--AVHTGFGGPTHVMDSRNRQQDGSEAGPGDDHGK 194
           G+R  G  NNG++ A     TG GG   +   R  +QDG++ G G D GK
Sbjct: 184 GIRPMGMTNNGMQHAMQQPETGLGGNVGL---RGGKQDGAD-GQGKDDGK 229
[Close]
BLAST of Spo22275.1 vs. TAIR (Arabidopsis)
Match: AT4G00850.1 (GRF1-interacting factor 3)

HSP 1 Score: 87.0 bits (214), Expect = 1.300e-17
Identity = 77/191 (40.31%), Postives = 97/191 (50.79%), Query Frame = 1 

		  

Query: 12  LQQQQQMFN--IPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQLQ 71
           +QQ  QM    +P+  PT  I+TEQIQKYLDENK+LI+AI+E+QN+GK+ ECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 72  KNLMYLAAIADA--QPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTGPRMPFVL 131
           KNLMYLAAIADA  QPPA+T  S    P   +       PPP       Q  G       
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 132 QSFDQQSPQMQY---QQSMSGSMGMRMGGNNGL---RPAAVHTGFGGPTHVMDSRNRQQD 191
             F  + P +Q+    Q +     +      G    RP  ++    G  H M        
Sbjct: 121 GIFPPRGP-LQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNN-NGLQHQMHHHETALA 180

Query: 192 GSEAGPGDDHG 193
            + AGP D  G
Sbjct: 181 ANNAGPNDASG 189
[Close]
BLAST of Spo22275.1 vs. TAIR (Arabidopsis)
Match: AT5G28640.1 (SSXT family protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.700e-10
Identity = 75/203 (36.95%), Postives = 98/203 (48.28%), Query Frame = 1 

		  

Query: 9   QQQLQQQQQMFNIPASQPTIIISTEQIQKYLDENKQLILAIMESQNMGKINECAQYQAQL 68
           QQ L Q Q M    A      ++++ IQ+YLDENK LIL I+ESQN GK++ECA+ QA+L
Sbjct: 2   QQHLMQMQPMM---AGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARL 61

Query: 69  QKNLMYLAAIADAQPPASTGPSQPQIPMQSSIPQGPFMPPPKSAASPQQQTGPRMPFVLQ 128
           Q+NLMYLAAIAD+QP   +  SQ       S   G       S    QQQ   +     Q
Sbjct: 62  QRNLMYLAAIADSQPQPPSVHSQ-----YGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQ 121

Query: 129 SF-------------DQQSP--QMQYQQSMSGSMGMRM----GGNNGLRPAAVHTGFGGP 188
           S               QQ P   +Q+QQ     +GM      GG++GL    +  G  G 
Sbjct: 122 SLMAARSSMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLH---ILQGEAGG 181

Query: 189 THVMDSRNRQQDGSEAGPGDDHG 193
            H    R + + GS  G G+  G
Sbjct: 182 FHDF-GRGKPEMGS-GGGGEGRG 191
The following BLAST results are available for this feature:
BLAST of Spo22275.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902187980|gb|KNA11031.1|8.9e-96100.hypothetical protein SOVF_1389... [more]
gi|731371792|ref|XP_010666152.1|8.1e-6578.7PREDICTED: GRF1-interacting fa... [more]
gi|225455248|ref|XP_002272754.1|5.1e-3555.0PREDICTED: GRF1-interacting fa... [more]
gi|302143965|emb|CBI23070.3|1.1e-3454.9unnamed protein product [Vitis... [more]
gi|645254509|ref|XP_008233072.1|2.5e-2952.0PREDICTED: GRF1-interacting fa... [more]
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BLAST of Spo22275.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QWX9_SPIOL6.2e-96100.Uncharacterized protein OS=Spi... [more]
A0A0J8B5N0_BETVU5.6e-6578.7Uncharacterized protein OS=Bet... [more]
F6H760_VITVI3.6e-3555.0Putative uncharacterized prote... [more]
D9ZJ01_MALDO2.2e-2949.7GRF domain class transcription... [more]
M5X0H7_PRUPE2.9e-2952.0Uncharacterized protein OS=Pru... [more]
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BLAST of Spo22275.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GIF2_ARATH5.7e-2650.0GRF1-interacting factor 2 OS=A... [more]
GIF3_ARATH2.4e-1640.3GRF1-interacting factor 3 OS=A... [more]
GIF1_ARATH4.8e-936.9GRF1-interacting factor 1 OS=A... [more]
SSXT_HUMAN4.8e-934.5Protein SSXT OS=Homo sapiens G... [more]
SSXT_PONAB4.8e-934.5Protein SSXT OS=Pongo abelii G... [more]
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BLAST of Spo22275.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G01160.21.8e-2249.4GRF1-interacting factor 2[more]
AT4G00850.11.3e-1740.3GRF1-interacting factor 3[more]
AT5G28640.12.7e-1036.9SSXT family protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SS18 familyPANTHERPTHR23107SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEINcoord: 1..156
score: 1.0
IPR007726SS18 familyPFAMPF05030SSXTcoord: 30..84
score: 4.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048366 leaf development
biological_process GO:0009085 lysine biosynthetic process
biological_process GO:0051276 chromosome organization
biological_process GO:0006259 DNA metabolic process
biological_process GO:0006996 organelle organization
biological_process GO:0033043 regulation of organelle organization
biological_process GO:0034227 tRNA thio-modification
biological_process GO:0002098 tRNA wobble uridine modification
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0009658 chloroplast organization
biological_process GO:0006430 lysyl-tRNA aminoacylation
biological_process GO:0007155 cell adhesion
biological_process GO:0006364 rRNA processing
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009736 cytokinin-activated signaling pathway
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0010104 regulation of ethylene-activated signaling pathway
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0030001 metal ion transport
biological_process GO:0022402 cell cycle process
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006378 mRNA polyadenylation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0048481 plant ovule development
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0048608 reproductive structure development
biological_process GO:0006457 protein folding
biological_process GO:0032502 developmental process
biological_process GO:0044248 cellular catabolic process
biological_process GO:0009987 cellular process
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0016070 RNA metabolic process
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0009791 post-embryonic development
biological_process GO:0006810 transport
biological_process GO:0006096 glycolytic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0016573 histone acetylation
biological_process GO:0048856 anatomical structure development
biological_process GO:0048229 gametophyte development
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0044070 regulation of anion transport
biological_process GO:0006121 mitochondrial electron transport, succinate to ubiquinone
biological_process GO:0055085 transmembrane transport
biological_process GO:0051028 mRNA transport
biological_process GO:0015031 protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006629 lipid metabolic process
biological_process GO:0009252 peptidoglycan biosynthetic process
biological_process GO:0019538 protein metabolic process
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0070932 histone H3 deacetylation
biological_process GO:0019915 lipid storage
biological_process GO:0061647 histone H3-K9 modification
biological_process GO:0070933 histone H4 deacetylation
biological_process GO:0048312 intracellular distribution of mitochondria
biological_process GO:0030036 actin cytoskeleton organization
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0051301 cell division
biological_process GO:0048825 cotyledon development
biological_process GO:0006281 DNA repair
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0009909 regulation of flower development
biological_process GO:0050826 response to freezing
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0048575 short-day photoperiodism, flowering
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0016024 CDP-diacylglycerol biosynthetic process
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010148 transpiration
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0007165 signal transduction
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0001558 regulation of cell growth
biological_process GO:0051302 regulation of cell division
biological_process GO:0030155 regulation of cell adhesion
biological_process GO:0031540 regulation of anthocyanin biosynthetic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0048281 inflorescence morphogenesis
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0050832 defense response to fungus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0008356 asymmetric cell division
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006412 translation
biological_process GO:0006508 proteolysis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0001510 RNA methylation
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0030488 tRNA methylation
biological_process GO:0070475 rRNA base methylation
biological_process GO:0048511 rhythmic process
biological_process GO:0009651 response to salt stress
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0018279 protein N-linked glycosylation via asparagine
biological_process GO:2000027 regulation of organ morphogenesis
biological_process GO:0009410 response to xenobiotic stimulus
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006396 RNA processing
biological_process GO:0010048 vernalization response
biological_process GO:0080147 root hair cell development
biological_process GO:0006606 protein import into nucleus
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0051604 protein maturation
biological_process GO:0042545 cell wall modification
biological_process GO:0009553 embryo sac development
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0006338 chromatin remodeling
biological_process GO:0043687 post-translational protein modification
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005849 mRNA cleavage factor complex
cellular_component GO:0005618 cell wall
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0000118 histone deacetylase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016020 membrane
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000786 nucleosome
cellular_component GO:0045281 succinate dehydrogenase complex
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005643 nuclear pore
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0016442 RISC complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0030687 preribosome, large subunit precursor
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0008250 oligosaccharyltransferase complex
cellular_component GO:0031011 Ino80 complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0000785 chromatin
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0005730 nucleolus
cellular_component GO:0009505 plant-type cell wall
molecular_function GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0004816 asparagine-tRNA ligase activity
molecular_function GO:0008308 voltage-gated anion channel activity
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0017056 structural constituent of nuclear pore
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0051538 3 iron, 4 sulfur cluster binding
molecular_function GO:0003975 UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0019199 transmembrane receptor protein kinase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0003712 transcription coregulator activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0005488 binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003729 mRNA binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0046970 NAD-dependent histone deacetylase activity (H4-K16 specific)
molecular_function GO:0000049 tRNA binding
molecular_function GO:0046969 NAD-dependent histone deacetylase activity (H3-K9 specific)
molecular_function GO:0097372 NAD-dependent histone deacetylase activity (H3-K18 specific)
molecular_function GO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function GO:0005215 transporter activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004824 lysine-tRNA ligase activity
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo232980.80Barchart | Table
Spo267260.79Barchart | Table
Spo163780.78Barchart | Table
Spo168350.78Barchart | Table
Spo244160.78Barchart | Table
Spo030070.77Barchart | Table
Spo056180.77Barchart | Table
Spo192310.77Barchart | Table
Spo138180.77Barchart | Table
Spo154770.76Barchart | Table
Spo102110.76Barchart | Table
Spo069060.76Barchart | Table
Spo187840.76Barchart | Table
Spo044970.76Barchart | Table
Spo024700.75Barchart | Table
Spo249160.75Barchart | Table
Spo218180.75Barchart | Table
Spo217280.75Barchart | Table
Spo212780.75Barchart | Table
Spo052320.75Barchart | Table
Spo209340.75Barchart | Table
Spo191780.75Barchart | Table
Spo240640.74Barchart | Table
Spo049140.74Barchart | Table
Spo061010.74Barchart | Table
Spo089310.74Barchart | Table
Spo174710.74Barchart | Table
Spo098550.74Barchart | Table
Spo029930.73Barchart | Table
Spo132960.73Barchart | Table
Spo077820.73Barchart | Table
Spo142670.73Barchart | Table
Spo270400.73Barchart | Table
Spo159340.73Barchart | Table
Spo067870.73Barchart | Table
Spo056410.72Barchart | Table
Spo120840.72Barchart | Table
Spo029310.72Barchart | Table
Spo242660.72Barchart | Table
Spo014780.72Barchart | Table
Spo134870.72Barchart | Table
Spo178500.71Barchart | Table
Spo105530.71Barchart | Table
Spo021050.71Barchart | Table
Spo079160.71Barchart | Table
Spo182210.71Barchart | Table
Spo151600.71Barchart | Table
Spo151330.71Barchart | Table
Spo064970.71Barchart | Table
Spo206940.71Barchart | Table
Spo194410.71Barchart | Table
Spo256610.71Barchart | Table
Spo025180.71Barchart | Table
Spo233960.70Barchart | Table
Spo050900.70Barchart | Table
Spo063410.70Barchart | Table
Spo079690.70Barchart | Table
Spo081980.70Barchart | Table
Spo093070.70Barchart | Table
Spo156410.70Barchart | Table
Spo159040.70Barchart | Table
Spo225050.70Barchart | Table
Spo130610.69Barchart | Table
Spo192840.69Barchart | Table
Spo060970.69Barchart | Table
Spo201040.69Barchart | Table
Spo062770.69Barchart | Table
Spo163110.69Barchart | Table
Spo220910.69Barchart | Table
Spo202350.69Barchart | Table
Spo225350.69Barchart | Table
Spo128770.69Barchart | Table
Spo230920.69Barchart | Table
Spo249370.69Barchart | Table
Spo096330.68Barchart | Table
Spo041780.68Barchart | Table
Spo030080.68Barchart | Table
Spo271010.68Barchart | Table
Spo004440.68Barchart | Table
Spo074480.68Barchart | Table
Spo011280.68Barchart | Table
Spo015350.67Barchart | Table
Spo116930.67Barchart | Table
Spo249180.67Barchart | Table
Spo249360.67Barchart | Table
Spo099640.67Barchart | Table
Spo108910.67Barchart | Table
Spo035270.67Barchart | Table
Spo255910.67Barchart | Table
Spo205190.67Barchart | Table
Spo214060.67Barchart | Table
Spo184070.67Barchart | Table
Spo239660.66Barchart | Table
Spo117420.66Barchart | Table
Spo143800.66Barchart | Table
Spo150630.66Barchart | Table
Spo111890.66Barchart | Table
Spo001950.66Barchart | Table
Spo170800.66Barchart | Table
Spo094950.66Barchart | Table
Spo084890.66Barchart | Table
Spo062020.66Barchart | Table
Spo054150.66Barchart | Table
Spo051140.66Barchart | Table
Spo208960.66Barchart | Table
Spo045380.66Barchart | Table
Spo229360.66Barchart | Table
Spo233470.66Barchart | Table
Spo029880.66Barchart | Table
Spo018060.66Barchart | Table
Spo247850.65Barchart | Table
Spo024030.65Barchart | Table
Spo126990.65Barchart | Table
Spo001250.65Barchart | Table
Spo030060.65Barchart | Table
Spo250030.65Barchart | Table
Spo214400.65Barchart | Table
Spo194340.65Barchart | Table
Spo101220.65Barchart | Table
Spo139130.65Barchart | Table
Spo127570.65Barchart | Table