Spo22272 (gene) | SpinachBase

Overview


Name	Spo22272
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family
Location	chr3 : 6829968 .. 6830381 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGTGGTGAAAGACAACACATGAACTTCCACCTCCACCTCTCCAATCTCCTCCACCATCACCACCACGGCCACCACCACCATCGCGGCGGAGACAACAACAACAAGGGTGGTGTACCAAAAGGGTGCATGGCGGTTCTAGTAGGGCATGAAGGAGAAGGGAAACTAGAAAGGTTTGTGATTCCAATTGTGTACATTAATCACCCTCTATTCATGAAACTTCTTAAAGAAGCTGAGGAAGAGTATGGATTTGACCAAAAGGGCCCTATCACTATTCCATGCCACGTGGAGCAATTCCGTAACGTTCAAGACGTGATTGATCGTGAGAACCACCGTATGATGAACCCTCATCACCATCATCATCACCATCATCATCATCATCACAACAATTTCTTGTGCTTCAAGGCTTGA

mRNA sequence

ATGGGTAGTGGTGAAAGACAACACATGAACTTCCACCTCCACCTCTCCAATCTCCTCCACCATCACCACCACGGCCACCACCACCATCGCGGCGGAGACAACAACAACAAGGGTGGTGTACCAAAAGGGTGCATGGCGGTTCTAGTAGGGCATGAAGGAGAAGGGAAACTAGAAAGGTTTGTGATTCCAATTGTGTACATTAATCACCCTCTATTCATGAAACTTCTTAAAGAAGCTGAGGAAGAGTATGGATTTGACCAAAAGGGCCCTATCACTATTCCATGCCACGTGGAGCAATTCCGTAACGTTCAAGACGTGATTGATCGTGAGAACCACCGTATGATGAACCCTCATCACCATCATCATCACCATCATCATCATCATCACAACAATTTCTTGTGCTTCAAGGCTTGA

Coding sequence (CDS)

ATGGGTAGTGGTGAAAGACAACACATGAACTTCCACCTCCACCTCTCCAATCTCCTCCACCATCACCACCACGGCCACCACCACCATCGCGGCGGAGACAACAACAACAAGGGTGGTGTACCAAAAGGGTGCATGGCGGTTCTAGTAGGGCATGAAGGAGAAGGGAAACTAGAAAGGTTTGTGATTCCAATTGTGTACATTAATCACCCTCTATTCATGAAACTTCTTAAAGAAGCTGAGGAAGAGTATGGATTTGACCAAAAGGGCCCTATCACTATTCCATGCCACGTGGAGCAATTCCGTAACGTTCAAGACGTGATTGATCGTGAGAACCACCGTATGATGAACCCTCATCACCATCATCATCACCATCATCATCATCATCACAACAATTTCTTGTGCTTCAAGGCTTGA

Protein sequence

MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHHHHHHHHHHHNNFLCFKA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo22272.1	Spo22272.1	mRNA

Homology

[Close]

BLAST of Spo22272.1 vs. NCBI nr
Match: gi|902192609|gb|KNA12084.1| (hypothetical protein SOVF_129200 [Spinacia oleracea])

HSP 1 Score: 286.6 bits (732), Expect = 2.300e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60
           MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF
Sbjct: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60

Query: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH 120
           VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH
Sbjct: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH 120

Query: 121 HHHHHHHHHNNFLCFKA 138
           HHHHHHHHHNNFLCFKA
Sbjct: 121 HHHHHHHHHNNFLCFKA 137

[Close]

BLAST of Spo22272.1 vs. NCBI nr
Match: gi|870843052|gb|KMS96319.1| (hypothetical protein BVRB_000330 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 200.3 bits (508), Expect = 2.200e-48
Identity = 105/140 (75.00%), Postives = 117/140 (83.57%), Query Frame = 1


		  
Query: 1   MGSGERQHM-NFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLER 60
           MGSGE+ HM NF+L++S+LLHHHH+ HHHH    +  KG VPKGCM VLVGHEGE KLER
Sbjct: 1   MGSGEKHHMINFNLYISHLLHHHHNHHHHHHRNKDEIKG-VPKGCMVVLVGHEGEEKLER 60

Query: 61  FVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHH 120
           FVIPIVY NHP F+ LLKEAEEEYGF+QKGPITIPCHVEQFR+VQ +IDRE H M  PHH
Sbjct: 61  FVIPIVYTNHPKFLDLLKEAEEEYGFNQKGPITIPCHVEQFRHVQGLIDREYHMMNYPHH 120

Query: 121 HHHHHH--HHHHNNFLCFKA 138
           HH HHH  HHHH+NFLCFKA
Sbjct: 121 HHQHHHDQHHHHHNFLCFKA 139

[Close]

BLAST of Spo22272.1 vs. NCBI nr
Match: gi|976898902|gb|KVH87677.1| (hypothetical protein Ccrd_025029 [Cynara cardunculus var. scolymus])

HSP 1 Score: 164.1 bits (414), Expect = 1.700e-37
Identity = 85/144 (59.03%), Postives = 106/144 (73.61%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNK-------GGVPKGCMAVLVGHEG 60
           MGSG++  ++FHLHL    HHHHH HHH +  D   K         +PKGCMAV+VGHEG
Sbjct: 1   MGSGDKHFLSFHLHL----HHHHHHHHHQQQEDQETKKDQHNMSNSIPKGCMAVMVGHEG 60

Query: 61  EGKLERFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHR 120
           E + +RFVIP++YI HPLFM+LLKEAEEEYGFD +GPI IPC V+QF NVQ +I +++  
Sbjct: 61  EEQ-KRFVIPVIYIYHPLFMELLKEAEEEYGFDHRGPINIPCDVQQFSNVQGLIKKDDFF 120

Query: 121 MMNPHHHHHHHHHHHHNNFLCFKA 138
             + HHHHHHHHHHHH++  CFKA
Sbjct: 121 YNHQHHHHHHHHHHHHHHIWCFKA 139

[Close]

BLAST of Spo22272.1 vs. NCBI nr
Match: gi|224120972|ref|XP_002318465.1| (hypothetical protein POPTR_0012s03050g [Populus trichocarpa])

HSP 1 Score: 162.2 bits (409), Expect = 6.600e-37
Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKG--GVPKGCMAVLVGHEGEGKLE 60
           MGSG++ H++FH+HL N  HHHHH HHHH    +  K    +PKGC+AV+VG +GE + +
Sbjct: 1   MGSGDKNHLSFHIHLPNHHHHHHHHHHHHHHDHHGKKQLKDIPKGCLAVMVG-QGEEQ-Q 60

Query: 61  RFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPH 120
           RFVIP++YINHPLFM+LLKEAEEE+GFDQ+GPITIPCHVE+FRNVQ +I+ E     +  
Sbjct: 61  RFVIPVIYINHPLFMQLLKEAEEEFGFDQEGPITIPCHVEEFRNVQGMIEEEKSSQDHQQ 120

Query: 121 HHHHHHHHHHHNNFLCFK 137
             HHHHHHHHH   LCF+
Sbjct: 121 QQHHHHHHHHH--ILCFR 134

[Close]

BLAST of Spo22272.1 vs. NCBI nr
Match: gi|590674460|ref|XP_007039174.1| (SAUR family protein [Theobroma cacao])

HSP 1 Score: 154.8 bits (390), Expect = 1.100e-34
Identity = 82/136 (60.29%), Postives = 106/136 (77.94%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60
           M SG++ H+NFHLH+ +L     H  HHH   D  +   +PKGC+A+LVG +GE + +RF
Sbjct: 1   MRSGDKHHVNFHLHMPHL-----HSFHHHEKKDLKD---IPKGCLAILVG-QGEEQ-QRF 60

Query: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH 120
           VIP++YINHPLFM+LLKEAEEEYGFDQKGPITIPCHVE+FRNVQ +ID+E H+     HH
Sbjct: 61  VIPVIYINHPLFMQLLKEAEEEYGFDQKGPITIPCHVEEFRNVQGMIDKEQHQ-----HH 120

Query: 121 HHHHHHHHHNNFLCFK 137
           HHHH+HH+H++  CF+
Sbjct: 121 HHHHYHHNHHHVWCFR 121

[Close]

BLAST of Spo22272.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXS8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_129200 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.600e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60
           MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF
Sbjct: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60

Query: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH 120
           VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH
Sbjct: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH 120

Query: 121 HHHHHHHHHNNFLCFKA 138
           HHHHHHHHHNNFLCFKA
Sbjct: 121 HHHHHHHHHNNFLCFKA 137

[Close]

BLAST of Spo22272.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B516_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_000330 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.500e-48
Identity = 105/140 (75.00%), Postives = 117/140 (83.57%), Query Frame = 1


		  
Query: 1   MGSGERQHM-NFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLER 60
           MGSGE+ HM NF+L++S+LLHHHH+ HHHH    +  KG VPKGCM VLVGHEGE KLER
Sbjct: 1   MGSGEKHHMINFNLYISHLLHHHHNHHHHHHRNKDEIKG-VPKGCMVVLVGHEGEEKLER 60

Query: 61  FVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHH 120
           FVIPIVY NHP F+ LLKEAEEEYGF+QKGPITIPCHVEQFR+VQ +IDRE H M  PHH
Sbjct: 61  FVIPIVYTNHPKFLDLLKEAEEEYGFNQKGPITIPCHVEQFRHVQGLIDREYHMMNYPHH 120

Query: 121 HHHHHH--HHHHNNFLCFKA 138
           HH HHH  HHHH+NFLCFKA
Sbjct: 121 HHQHHHDQHHHHHNFLCFKA 139

[Close]

BLAST of Spo22272.1 vs. UniProtKB/TrEMBL
Match: A0A103XBJ6_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_025029 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.200e-37
Identity = 85/144 (59.03%), Postives = 106/144 (73.61%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNK-------GGVPKGCMAVLVGHEG 60
           MGSG++  ++FHLHL    HHHHH HHH +  D   K         +PKGCMAV+VGHEG
Sbjct: 1   MGSGDKHFLSFHLHL----HHHHHHHHHQQQEDQETKKDQHNMSNSIPKGCMAVMVGHEG 60

Query: 61  EGKLERFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHR 120
           E + +RFVIP++YI HPLFM+LLKEAEEEYGFD +GPI IPC V+QF NVQ +I +++  
Sbjct: 61  EEQ-KRFVIPVIYIYHPLFMELLKEAEEEYGFDHRGPINIPCDVQQFSNVQGLIKKDDFF 120

Query: 121 MMNPHHHHHHHHHHHHNNFLCFKA 138
             + HHHHHHHHHHHH++  CFKA
Sbjct: 121 YNHQHHHHHHHHHHHHHHIWCFKA 139

[Close]

BLAST of Spo22272.1 vs. UniProtKB/TrEMBL
Match: B9I233_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s03050g PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.600e-37
Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKG--GVPKGCMAVLVGHEGEGKLE 60
           MGSG++ H++FH+HL N  HHHHH HHHH    +  K    +PKGC+AV+VG +GE + +
Sbjct: 1   MGSGDKNHLSFHIHLPNHHHHHHHHHHHHHHDHHGKKQLKDIPKGCLAVMVG-QGEEQ-Q 60

Query: 61  RFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPH 120
           RFVIP++YINHPLFM+LLKEAEEE+GFDQ+GPITIPCHVE+FRNVQ +I+ E     +  
Sbjct: 61  RFVIPVIYINHPLFMQLLKEAEEEFGFDQEGPITIPCHVEEFRNVQGMIEEEKSSQDHQQ 120

Query: 121 HHHHHHHHHHHNNFLCFK 137
             HHHHHHHHH   LCF+
Sbjct: 121 QQHHHHHHHHH--ILCFR 134

[Close]

BLAST of Spo22272.1 vs. UniProtKB/TrEMBL
Match: A0A061G1I7_THECC (SAUR family protein OS=Theobroma cacao GN=TCM_015490 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.400e-35
Identity = 82/136 (60.29%), Postives = 106/136 (77.94%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60
           M SG++ H+NFHLH+ +L     H  HHH   D  +   +PKGC+A+LVG +GE + +RF
Sbjct: 1   MRSGDKHHVNFHLHMPHL-----HSFHHHEKKDLKD---IPKGCLAILVG-QGEEQ-QRF 60

Query: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH 120
           VIP++YINHPLFM+LLKEAEEEYGFDQKGPITIPCHVE+FRNVQ +ID+E H+     HH
Sbjct: 61  VIPVIYINHPLFMQLLKEAEEEYGFDQKGPITIPCHVEEFRNVQGMIDKEQHQ-----HH 120

Query: 121 HHHHHHHHHNNFLCFK 137
           HHHH+HH+H++  CF+
Sbjct: 121 HHHHYHHNHHHVWCFR 121

[Close]

BLAST of Spo22272.1 vs. ExPASy Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.300e-23
Identity = 65/138 (47.10%), Postives = 85/138 (61.59%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60
           MG+GE+   +F LH    +                    VPKGC+A+ VG +GE + +RF
Sbjct: 1   MGTGEKTLKSFQLHRKQSV----------------KVKDVPKGCLAIKVGSQGEEQ-QRF 60

Query: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMM-NPHH 120
           ++P++Y NHPLFM+LLKEAE+EYGFDQKG ITIPCHVE+FR VQ +ID E      N HH
Sbjct: 61  IVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNGNNHH 120

Query: 121 HHHHHHHHHHNNFLCFKA 138
           H H     +H+   CF+A
Sbjct: 121 HRHGGRDQYHHLVGCFRA 121

[Close]

BLAST of Spo22272.1 vs. ExPASy Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.600e-11
Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 1


		  
Query: 36  NKGGVPKGCMAVLVGHEGEGKLERFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPC 95
           +K  VP+G + V VGHE    +ERFV+    +NHP+F+ LLK++ +EYG++Q+G + IPC
Sbjct: 34  HKSWVPEGHVPVYVGHE----MERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPC 93

Query: 96  HVEQFRNV 104
           HV  F  +
Sbjct: 94  HVLVFERI 97

[Close]

BLAST of Spo22272.1 vs. ExPASy Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.800e-11
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1


		  
Query: 33  DNNNKGGVPKGCMAVLVGHEGEGKLERFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPIT 92
           D+     VP+G +A+ VG + +G   R ++PIVY NHPLF +LL+EAE+EYGF  +G IT
Sbjct: 72  DHKKADPVPRGHLAIYVGQK-DGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGIT 131

Query: 93  IPCHVEQFRNVQDVIDRENHRMMNPHHHH 122
           IPC    F  V+  I   +   + P   H
Sbjct: 132 IPCLYSDFERVKTRIASGSSSRVFPWGRH 159

[Close]

BLAST of Spo22272.1 vs. ExPASy Swiss-Prot
Match: SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.800e-11
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 1


		  
Query: 41  PKGCMAVLVGHEGEGKLERFVIPIVYINHPLFMKLLKEAEEEYGFDQ-KGPITIPCHVEQ 100
           P+G MAV VG E + K +R+V+P+ Y+N PLF +LL ++EEE+G+D   G +TIPCH   
Sbjct: 22  PRGFMAVYVG-ENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIPCHESL 81

Query: 101 FRNVQDVI 108
           F  V   I
Sbjct: 82  FFTVTSQI 88

[Close]

BLAST of Spo22272.1 vs. ExPASy Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.800e-11
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 1


		  
Query: 40  VPKGCMAVLVGHEGEGKLERFVIPIVYINHPLFMKLLKEAEEEYGFDQ-KGPITIPCHVE 99
           VPKG  AV VG     K+ RF IP+ Y+N P F +LL +AEEE+G+D   G +TIPC  E
Sbjct: 26  VPKGYAAVYVGD----KMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEE 85

Query: 100 QFRNV 104
           +F NV
Sbjct: 86  EFLNV 86

[Close]

BLAST of Spo22272.1 vs. TAIR (Arabidopsis)
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.7 bits (304), Expect = 3.500e-28
Identity = 69/134 (51.49%), Postives = 95/134 (70.90%), Query Frame = 1


		  
Query: 7   QHM--NFHLHLSNL--LHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGK-LERFV 66
           +HM   FH H+ +L  L HHHH HHH           VPKGC+A++VGHE + + L RFV
Sbjct: 19  KHMVFKFHFHVPHLHILPHHHHHHHHD----------VPKGCVAIMVGHEDDEEGLHRFV 78

Query: 67  IPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHHH 126
           +P+V+++HPLF+ LLKEAE+EYGF   GPITIPC V++F++VQ+VID E HR  +   H 
Sbjct: 79  VPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVDEFKHVQEVIDEETHRRHSHGGHG 138

Query: 127 HHHHHHHHNNFLCF 136
           H++H+HH+N+  CF
Sbjct: 139 HNNHNHHNNHLRCF 142

[Close]

BLAST of Spo22272.1 vs. TAIR (Arabidopsis)
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 3.900e-27
Identity = 71/129 (55.04%), Postives = 90/129 (69.77%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60
           MG+G++   ++  H+  L   HHH H H +         VPKGC+AV VG +GE + ERF
Sbjct: 1   MGNGDKVMSHWSFHIPRL---HHHEHDHEK---------VPKGCLAVKVG-QGEEQ-ERF 60

Query: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMMNPHHH 120
           VIP++Y NHPLF +LLKEAEEE+GF QKG ITIPCHVE+FR VQ +IDREN R +  +  
Sbjct: 61  VIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEFRYVQGLIDRENTRFLGTNLL 115

Query: 121 HHHHHHHHH 130
            HHHHHH+H
Sbjct: 121 DHHHHHHNH 115

[Close]

BLAST of Spo22272.1 vs. TAIR (Arabidopsis)
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 1.800e-24
Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGG---VPKGCMAVLVGHEGEGKL 60
           MGSGE+   + H +  N +              +N+K G   VPKGC+A+ VG + E K 
Sbjct: 1   MGSGEKILKSVHSNRPNNVK-------------SNSKHGIKDVPKGCLAIKVGSKEEEK- 60

Query: 61  ERFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRE 111
           +RFV+P+ Y NHPLFM+LL+EAEEEYGF+QKG ITIPCHVE FR VQD+I+RE
Sbjct: 61  QRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFRYVQDMINRE 99

[Close]

BLAST of Spo22272.1 vs. TAIR (Arabidopsis)
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.8 bits (268), Expect = 5.200e-24
Identity = 65/138 (47.10%), Postives = 85/138 (61.59%), Query Frame = 1


		  
Query: 1   MGSGERQHMNFHLHLSNLLHHHHHGHHHHRGGDNNNKGGVPKGCMAVLVGHEGEGKLERF 60
           MG+GE+   +F LH    +                    VPKGC+A+ VG +GE + +RF
Sbjct: 1   MGTGEKTLKSFQLHRKQSV----------------KVKDVPKGCLAIKVGSQGEEQ-QRF 60

Query: 61  VIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQFRNVQDVIDRENHRMM-NPHH 120
           ++P++Y NHPLFM+LLKEAE+EYGFDQKG ITIPCHVE+FR VQ +ID E      N HH
Sbjct: 61  IVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNGNNHH 120

Query: 121 HHHHHHHHHHNNFLCFKA 138
           H H     +H+   CF+A
Sbjct: 121 HRHGGRDQYHHLVGCFRA 121

[Close]

BLAST of Spo22272.1 vs. TAIR (Arabidopsis)
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 82.8 bits (203), Expect = 1.800e-16
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 1


		  
Query: 40  VPKGCMAVLVGHEGEGKLERFVIPIVYINHPLFMKLLKEAEEEYGFDQKGPITIPCHVEQ 99
           VPKG  AV +G + +G  +R ++PIVY NHPLF +LL+EAEEE+GF Q+G ITIPC    
Sbjct: 88  VPKGHSAVYIGKK-DGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGITIPCPYSD 147

Query: 100 FRNVQDVID 109
           F+ VQ  I+
Sbjct: 148 FKRVQTRIE 155

The following BLAST results are available for this feature:

BLAST of Spo22272.1 vs. NCBI nr
BLAST of Spo22272.1 vs. UniProtKB/TrEMBL
BLAST of Spo22272.1 vs. ExPASy Swiss-Prot
BLAST of Spo22272.1 vs. TAIR (Arabidopsis)

BLAST of Spo22272.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902192609\|gb\|KNA12084.1\|	2.3e-74	100.	hypothetical protein SOVF_1292...	[more]
gi\|870843052\|gb\|KMS96319.1\|	2.2e-48	75.0	hypothetical protein BVRB_0003...	[more]
gi\|976898902\|gb\|KVH87677.1\|	1.7e-37	59.0	hypothetical protein Ccrd_0250...	[more]
gi\|224120972\|ref\|XP_002318465.1\|	6.6e-37	60.8	hypothetical protein POPTR_001...	[more]
gi\|590674460\|ref\|XP_007039174.1\|	1.1e-34	60.2	SAUR family protein [Theobroma...	[more]

BLAST of Spo22272.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QXS8_SPIOL	1.6e-74	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B516_BETVU	1.5e-48	75.0	Uncharacterized protein OS=Bet...	[more]
A0A103XBJ6_CYNCS	1.2e-37	59.0	Uncharacterized protein OS=Cyn...	[more]
B9I233_POPTR	4.6e-37	60.8	Uncharacterized protein OS=Pop...	[more]
A0A061G1I7_THECC	7.4e-35	60.2	SAUR family protein OS=Theobro...	[more]

BLAST of Spo22272.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SAU32_ARATH	9.3e-23	47.1	Auxin-responsive protein SAUR3...	[more]
SAU71_ARATH	1.6e-11	45.5	Auxin-responsive protein SAUR7...	[more]
SAU36_ARATH	2.8e-11	42.7	Auxin-responsive protein SAUR3...	[more]
SAU15_ARATH	2.8e-11	48.5	Auxin-responsive protein SAUR1...	[more]
A10A5_SOYBN	4.8e-11	52.3	Auxin-induced protein 10A5 OS=...	[more]

BLAST of Spo22272.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G53590.1	3.5e-28	51.4	SAUR-like auxin-responsive pro...	[more]
AT4G00880.1	3.9e-27	55.0	SAUR-like auxin-responsive pro...	[more]
AT3G61900.1	1.8e-24	53.1	SAUR-like auxin-responsive pro...	[more]
AT2G46690.1	5.2e-24	47.1	SAUR-like auxin-responsive pro...	[more]
AT3G60690.1	1.8e-16	55.0	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 35..104 score: 2.2
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 7..135 score: 1.9
None	No IPR available	PANTHER	PTHR31374:SF29	SUBFAMILY NOT NAMED	coord: 7..135 score: 1.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009809	lignin biosynthetic process
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0009811	stilbene biosynthetic process
biological_process	GO:0045017	glycerolipid biosynthetic process
biological_process	GO:0006535	cysteine biosynthetic process from serine
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0010286	heat acclimation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0015979	photosynthesis
biological_process	GO:0015031	protein transport
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0019439	aromatic compound catabolic process
biological_process	GO:0006396	RNA processing
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006555	methionine metabolic process
biological_process	GO:0035999	tetrahydrofolate interconversion
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0019285	glycine betaine biosynthetic process from choline
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0046786	viral replication complex formation and maintenance
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0008295	spermidine biosynthetic process
biological_process	GO:0006597	spermine biosynthetic process
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0042548	regulation of photosynthesis, light reaction
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0006457	protein folding
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0009932	cell tip growth
biological_process	GO:0043547	positive regulation of GTPase activity
biological_process	GO:0010053	root epidermal cell differentiation
biological_process	GO:0006950	response to stress
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0070988	demethylation
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0001101	response to acid chemical
biological_process	GO:0009725	response to hormone
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0019509	L-methionine salvage from methylthioadenosine
biological_process	GO:0007015	actin filament organization
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0015969	guanosine tetraphosphate metabolic process
biological_process	GO:0016036	cellular response to phosphate starvation
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0019375	galactolipid biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0042545	cell wall modification
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0007165	signal transduction
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0009408	response to heat
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0006417	regulation of translation
biological_process	GO:0006525	arginine metabolic process
biological_process	GO:0042793	plastid transcription
biological_process	GO:0009744	response to sucrose
biological_process	GO:0006810	transport
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0006811	ion transport
biological_process	GO:0009409	response to cold
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0009646	response to absence of light
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0046680	response to DDT
biological_process	GO:0033591	response to L-ascorbic acid
biological_process	GO:0006574	valine catabolic process
biological_process	GO:0009298	GDP-mannose biosynthetic process
biological_process	GO:0010043	response to zinc ion
biological_process	GO:0006568	tryptophan metabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0046251	limonene catabolic process
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:1901918	negative regulation of exoribonuclease activity
biological_process	GO:0006552	leucine catabolic process
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0018874	benzoate metabolic process
biological_process	GO:0009611	response to wounding
biological_process	GO:0019853	L-ascorbic acid biosynthetic process
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0042908	xenobiotic transport
biological_process	GO:0030154	cell differentiation
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0009637	response to blue light
biological_process	GO:0009733	response to auxin
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0008610	lipid biosynthetic process
biological_process	GO:0032259	methylation
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0006000	fructose metabolic process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005622	intracellular
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005267	potassium channel activity
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0004476	mannose-6-phosphate isomerase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005094	Rho GDP-dissociation inhibitor activity
molecular_function	GO:0008559	xenobiotic transmembrane transporting ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0018489	vanillate monooxygenase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004022	alcohol dehydrogenase (NAD) activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0019133	choline monooxygenase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0046592	polyamine oxidase activity
molecular_function	GO:0008131	primary amine oxidase activity
molecular_function	GO:0004014	adenosylmethionine decarboxylase activity
molecular_function	GO:0016708	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity
molecular_function	GO:0016987	sigma factor activity
molecular_function	GO:0003727	single-stranded RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003779	actin binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008728	GTP diphosphokinase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0009001	serine O-acetyltransferase activity
molecular_function	GO:0004144	diacylglycerol O-acyltransferase activity
molecular_function	GO:0004300	enoyl-CoA hydratase activity
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0042409	caffeoyl-CoA O-methyltransferase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo00314	0.76	Barchart \| Table
Spo17345	0.76	Barchart \| Table
Spo22921	0.76	Barchart \| Table
Spo17860	0.75	Barchart \| Table
Spo20837	0.75	Barchart \| Table
Spo19812	0.75	Barchart \| Table
Spo20895	0.74	Barchart \| Table
Spo24425	0.74	Barchart \| Table
Spo01135	0.74	Barchart \| Table
Spo02825	0.74	Barchart \| Table
Spo18075	0.73	Barchart \| Table
Spo27354	0.73	Barchart \| Table
Spo12656	0.73	Barchart \| Table
Spo08337	0.73	Barchart \| Table
Spo23626	0.72	Barchart \| Table
Spo20651	0.72	Barchart \| Table
Spo04511	0.72	Barchart \| Table
Spo25493	0.72	Barchart \| Table
Spo16188	0.71	Barchart \| Table
Spo15949	0.71	Barchart \| Table
Spo23035	0.71	Barchart \| Table
Spo10990	0.71	Barchart \| Table
Spo19442	0.71	Barchart \| Table
Spo13463	0.71	Barchart \| Table
Spo03650	0.71	Barchart \| Table
Spo17986	0.71	Barchart \| Table
Spo05013	0.71	Barchart \| Table
Spo11573	0.71	Barchart \| Table
Spo10086	0.70	Barchart \| Table
Spo14830	0.70	Barchart \| Table
Spo05777	0.70	Barchart \| Table
Spo23258	0.70	Barchart \| Table
Spo00199	0.70	Barchart \| Table
Spo21484	0.70	Barchart \| Table
Spo14558	0.70	Barchart \| Table
Spo13260	0.70	Barchart \| Table
Spo19259	0.69	Barchart \| Table
Spo09378	0.69	Barchart \| Table
Spo05508	0.69	Barchart \| Table
Spo03638	0.69	Barchart \| Table
Spo02979	0.69	Barchart \| Table
Spo26224	0.69	Barchart \| Table
Spo12666	0.69	Barchart \| Table
Spo12688	0.69	Barchart \| Table
Spo15990	0.69	Barchart \| Table
Spo00165	0.69	Barchart \| Table
Spo00275	0.69	Barchart \| Table
Spo13928	0.69	Barchart \| Table
Spo00895	0.69	Barchart \| Table
Spo11303	0.69	Barchart \| Table
Spo00050	0.68	Barchart \| Table
Spo01093	0.68	Barchart \| Table
Spo07856	0.68	Barchart \| Table
Spo13645	0.68	Barchart \| Table
Spo15308	0.68	Barchart \| Table
Spo18231	0.68	Barchart \| Table
Spo18238	0.68	Barchart \| Table
Spo20907	0.68	Barchart \| Table
Spo26717	0.68	Barchart \| Table
Spo19423	0.67	Barchart \| Table
Spo17197	0.67	Barchart \| Table
Spo19444	0.67	Barchart \| Table
Spo10238	0.67	Barchart \| Table
Spo14655	0.67	Barchart \| Table
Spo04300	0.67	Barchart \| Table
Spo02649	0.67	Barchart \| Table
Spo01448	0.67	Barchart \| Table
Spo04615	0.67	Barchart \| Table
Spo07109	0.67	Barchart \| Table
Spo08654	0.67	Barchart \| Table
Spo18844	0.67	Barchart \| Table
Spo11416	0.67	Barchart \| Table
Spo14473	0.66	Barchart \| Table
Spo17132	0.66	Barchart \| Table
Spo14270	0.66	Barchart \| Table
Spo11681	0.66	Barchart \| Table
Spo17893	0.66	Barchart \| Table
Spo11635	0.66	Barchart \| Table
Spo11549	0.66	Barchart \| Table
Spo10373	0.66	Barchart \| Table
Spo09663	0.66	Barchart \| Table
Spo09453	0.66	Barchart \| Table
Spo08935	0.66	Barchart \| Table
Spo08255	0.66	Barchart \| Table
Spo06012	0.66	Barchart \| Table
Spo24779	0.66	Barchart \| Table
Spo25324	0.66	Barchart \| Table
Spo15704	0.66	Barchart \| Table
Spo17044	0.66	Barchart \| Table
Spo06918	0.66	Barchart \| Table
Spo23314	0.66	Barchart \| Table
Spo21361	0.65	Barchart \| Table
Spo18080	0.65	Barchart \| Table
Spo15215	0.65	Barchart \| Table
Spo25689	0.65	Barchart \| Table
Spo21274	0.65	Barchart \| Table