Spo22253 (gene)

Overview
NameSpo22253
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTranslocon at inner membrane of chloroplasts 21
LocationSpoScf_02401 : 10398 .. 14992 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCTTACCTTCACTGATTTCACAACGAAAGCAAGCATATTTTAAAAAGATATTTTCCCTTTTTTTGGTTCCCTTTCCAATCTCTCATATTTTAGTTATGCAGACGCTACTCTTACCGGCGGCTCGCCCCGGCGTTCTGCCGCCGTCACCGGTGGTAACAACAGCCGCGCATTTACACCTTTCGAGGCGAATACCTATTTCCAGTCGCTTTCTTTCTCCTCCTCCGTCGTCGTCTTCTTTATCTTCCTACCTTCCTTCTCTCTCTTCGACACAATCGAGAACAATGGCGCACTGGCTTCCTCTAATGGCGTCTTCTCCTGCTTCCACGGGTTACGGTTCACCGGTTGATGAGTCCGACCAGGTTAAACTTACTCAGGTGAGTTAGCTCACTGTAATTCAACTCTTTATGGGTCGTATTTCATGAATTTCTCGTGATTAATTCTAGGTTTTGCTTCTATTGTAAAATGCTGATGAATTTCTCCAATTTATAGTCCGAGTGCAATTGGTAACTGCAATTGAATTAGCCTGAGCGCATATTACGACTCTAAATTGCCGAATTCAGTGTCAGATTATGTTATTTATCCAGCTTAATTAGACACTGGTTTTGAAATTATAATCAAAATTCAAAGTTTTTTCTGTTCAGAATGTTATGGTTTAAAACCCTAATCTGACAGTAATGGTAGAATTTGGATTCAAATATGTTGATCTTGAGCAAATAAAATGGATTTGTACCTTGCAACCCTGAAGCAAATTTGAATTAGGAGCTGTAGACTGGTGATACAAAAGAGAGTTACTACTTAGCTAATGACCGTGATGGTGAAATTCGGACTCGAATGTTGTGGTCTTTGGACTGTTATGTTGCTTATGGATCGAACTTGTTTGAAATAGTATGAATGGAACTTTTTCTTTTTGAAATTAAACATAATTGCTCAAGAATGTGAAATTAATACTTCAGTTGGGAATGAGGATTGCCAATCTGTGATTGGAATTTTTCTTGATTAATGCACATTCGTTCTTTATGGAGAGATTATCTCTCCCCCCCTCCTGGGGCTCAACATGCTTTCCTGTCATCAGGTTTGGATATTTTAATGGAGTTCTGACTTGTGGAAAAATTTAGGAATATCTTTAGACAATGCTAACATGGTTGCTCGTTGATTGATAGTTATTGGTTTTACTTGCATGCCTGTGCCTTTACTGTTATTTACACCTTTGATGTTTGCATTTTGGACAGGTGGCTAAAAGACTAGAGAACACGGCGAGATATTTCAAAAGGTTGGGCACATTTGGGTTTTGGGGACAGCTAATATGCACGATTGTTTCTGCTGTGATTCTTTCATTTTCTGTTGTAGTCACTGGAAAGATCACATCGCCTGTTACCTTCTACGCTACTGCCGGTGGAATTGCTGCCGCTTTTATATCTGTTTTTTGGTCATTTGGTTACCTTAGGCTATCAGAGAAACTCCGCAAAACAGCAAATGACCCATCAAAGGTATGACCAAAGAGAAAACTACCGTTTTATTGCTGTAGGCATTGTTCACCTTTTGCAATGGTTTGTCCTTTGTTCTTTCGCGTTTAACAGAAGTAGTCTTCAGTAAGCATTTAAATTGTCATTTTAGAGAATAGAATAGGACACTCAAACTCTGATTCATGTCCTCTTTTTCCACATTAATGTACCATGTATGATGTAATAGAAAGCTTAGGCTCAGTTCTGGACTCAAGTTGTGAAATTCACGATCATGGTCCTAAGCTTTGTAAGTATCGGTTGGCTTTCTCATCAATTAGGATTTCCTTCTGGGTAGTGACAGTATAAGCTGTACTGTTATCTGTTCTCTTTCATGGTTTTTCTGTAGTTTTATGGAGTAGTGTTTATAAAATTTGTATGGTTACCGCCATACAGATGCAGTCAAATCAGAAGTGGTGTAAAAAAAAATTGGAAAGCAAGAAATGGTATAAAATTGTGATCTGTAGTTTGTCATATTTTCCCCCATGTCCGAGTGCAATATAGATAAAGTTGTTATTTGCTCTTGACTTTAGTTTGGGAATTCCTCTCACAGGGACTGCAGTAACTCTCACTTGAATCTGCAAAATTTTCTACTTCTAGACTTTGTTTTGGCCTTTGTAGTTTCCATGCACTGGCAATTACTTCACTCTGTTTTGCTTTCAAAAATTTCCATAGATTTTATGTATGTGCATCTTAAACTTCTTTCTTTATGATTCTCTTATTTTCCTACTTCTTAGTCCTTTCCAATATGTGGTCTTTTGTGCTGTTTGATTTGAGTAGTGATAGTGAATAACAATCTGATTCTTAGATATTTTGTTATCCTTCTGCTCAAGAGTGATTTTATAGTTTTCTTAATGGTTTTAGGCTCCCCCACGTGCTGATGTTGTCAGAAGTCTGAAAAATGGAATAGCTGTGAATCTGCTTGGTATGGGTTCTGCTATCCTGGGAATGCAAGCCACTGTAGGATTACTTGTGGCAAAGGCGCTCACTACATCTGCAAATCCTTACTATCAGGGTGTAGCCCCTGGAGCTAGCCCTGTTCTTGCTCTGGACGTGTTCTTGGTCCAGGTATTCATCTTTGGAACCTAAGTTTTGAGCCACAGAAATGCAATATCTGTCTCATGCAATTTTGTGTATTCTTGTTTCACAATTCCTGCCCTCCCTATAGGCAAAATGACATATTATGGGATTCCTTTGTTGACTATGGGTTAATGCACTTGAAAACAATTTGAAGGTTATTTTATTAACATGCAAAACTGATGATAAATATTGCATGGTATTCTAAAGTGACAAGTATAATGTATTGGAACCCTAAAGTGACAACCAATATGGAACAAAAAATATTTGCTAAAAGAAGCACATACGGAGTTCGGGGGTGGGTGTTGGTGGGGGGTAAAAGGAAGAGCTAGAAAGTGTTCCAATTTATTTTCATTAATGTATCTTGTTATTTTGGTTTTAGATGGATGCATATGGTACATCTTGTCAAGGAGTCATGTTAACCCTGCATGCATCTTATGTTGGCACCTTGCCACAGTTGTGCTCACTCAGGGTTACAAATGTACCTAGCAACTTTATCTAATTTTCTTTTGTGATGAAAGTCGCTTCTACAATGCTGTGAAGGCATACTGTAAAGGTCAGGTGAGCATTTAAGCATACTATGAAAGGTCATGTGAGCATTTAGGGATGTCAATGGGGCGGATGAGGATGTAGGTCCCTCCATTCCTATCCCCACCTAAAATTTGCATCCAAATTAAAAAACTTAAAAGTCTCACCTACATTCATATATCATATTCAAACAAATCCAAACACAAAAAAATTGATCACTTTTAGATTTTTTTAAATACTTGATTTGATTTGACGGTATGAAGTGGGGCGGACGGGGATGGGGCAGGTCCAACACAAAATCCACACCCGCCCCATCACCCATGGCGGGTACGATATTTATACCCACCCCTGCCCCACCACCCACTAAACTTCCCCCCATCCCCGCCTACTTGGGGCAGATGCGGGGCGGGTCTCCCATAAATCCCGCCCCTCTGACATCCCTAAGCATTTCTGATGAGTGGAATGGACTCCATAAACAAGCTTTTGAGTCATACGTAATAAATCCAAATGACACTATCCTTTAAATACGATGTTCATCTGTTGGACATCATACAAAATGTAATGAACCAAACTCAGATTAGTTTCAGAAACCACGCATTTGGGGACCACTATGAAAGCCTAAAACCAGTGGAAAAAATAATTAAGAGGTTATCAGCTAGTTAGGCAAGTTGAAAGATTATATACTCTGTATGTAATAACCTCAAAAGTCTTCTGTGAACAATAATCACCCTAATCAAGTTCTTACTCCCAGCTCATCCCGCAACAAACTAAAAAGAGGGTAGAGGTCCTGATAAGATATTCCATAATTTTGTTGATTGATTTTTAAATTTTAATTATTAAATTCAATTCTCGTGAATTTCTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNACAGAAATGTATCTTCTTGACGAACTCTCAATAACTCATTTGCTTATTCCTCTTGCAGGCATCAGCTAACACTATACTGTCTCATTTCTTCGGTCTTGTTTCATCTTTGGAATTGTTGCGGTCAGTAACATTGCCTACTGGTCAAACTGCTCCTGTTGCCAAGACCGCTTAGAGTTTTTTTGTGCTCTTATTTTCAACTGTACACAAGTGAATTCTTGATGAATTTCTCGTAATGGTCACAGACAAATTTCCTGTTGATATTTGTGTGGTGAACTATGTCAATAACAGTTGTAATAAGAAAAGGTTGTTAGGGGGTGAGGATTAGATAGCTGATTTTATTCAAATTCATAATTATGATGGAAATCATATATTTTGTTTAGCAGCAGTAACTTGAGGAGTGGAGAGCTATTTTATGTGATGCAAGTGCAGTTCCCGCGAGTATATTTTCACCATTATTAAATTCTTATTTTCTACTTGGTGATTGTTTTTGTTCGCAATTTGTTGTGTCAGAGGTTCTTGGCCCAACTCTTTTTCGCTATTGTATGGAAGTGAGCGTATGCAGTTTGTCCTTTCTATATAAT

mRNA sequence

AGCTTACCTTCACTGATTTCACAACGAAAGCAAGCATATTTTAAAAAGATATTTTCCCTTTTTTTGGTTCCCTTTCCAATCTCTCATATTTTAGTTATGCAGACGCTACTCTTACCGGCGGCTCGCCCCGGCGTTCTGCCGCCGTCACCGGTGGTAACAACAGCCGCGCATTTACACCTTTCGAGGCGAATACCTATTTCCAGTCGCTTTCTTTCTCCTCCTCCGTCGTCGTCTTCTTTATCTTCCTACCTTCCTTCTCTCTCTTCGACACAATCGAGAACAATGGCGCACTGGCTTCCTCTAATGGCGTCTTCTCCTGCTTCCACGGGTTACGGTTCACCGGTTGATGAGTCCGACCAGGTTAAACTTACTCAGGTGGCTAAAAGACTAGAGAACACGGCGAGATATTTCAAAAGGTTGGGCACATTTGGGTTTTGGGGACAGCTAATATGCACGATTGTTTCTGCTGTGATTCTTTCATTTTCTGTTGTAGTCACTGGAAAGATCACATCGCCTGTTACCTTCTACGCTACTGCCGGTGGAATTGCTGCCGCTTTTATATCTGTTTTTTGGTCATTTGGTTACCTTAGGCTATCAGAGAAACTCCGCAAAACAGCAAATGACCCATCAAAGGCTCCCCCACGTGCTGATGTTGTCAGAAGTCTGAAAAATGGAATAGCTGTGAATCTGCTTGGTATGGGTTCTGCTATCCTGGGAATGCAAGCCACTGTAGGATTACTTGTGGCAAAGGCGCTCACTACATCTGCAAATCCTTACTATCAGGGTGTAGCCCCTGGAGCTAGCCCTGTTCTTGCTCTGGACGTGTTCTTGGTCCAGGCATCAGCTAACACTATACTGTCTCATTTCTTCGGTCTTGTTTCATCTTTGGAATTGTTGCGGTCAGTAACATTGCCTACTGGTCAAACTGCTCCTGTTGCCAAGACCGCTTAGAGTTTTTTTGTGCTCTTATTTTCAACTGTACACAAGTGAATTCTTGATGAATTTCTCGTAATGGTCACAGACAAATTTCCTGTTGATATTTGTGTGGTGAACTATGTCAATAACAGTTGTAATAAGAAAAGGTTGTTAGGGGGTGAGGATTAGATAGCTGATTTTATTCAAATTCATAATTATGATGGAAATCATATATTTTGTTTAGCAGCAGTAACTTGAGGAGTGGAGAGCTATTTTATGTGATGCAAGTGCAGTTCCCGCGAGTATATTTTCACCATTATTAAATTCTTATTTTCTACTTGGTGATTGTTTTTGTTCGCAATTTGTTGTGTCAGAGGTTCTTGGCCCAACTCTTTTTCGCTATTGTATGGAAGTGAGCGTATGCAGTTTGTCCTTTCTATATAAT

Coding sequence (CDS)

ATGCAGACGCTACTCTTACCGGCGGCTCGCCCCGGCGTTCTGCCGCCGTCACCGGTGGTAACAACAGCCGCGCATTTACACCTTTCGAGGCGAATACCTATTTCCAGTCGCTTTCTTTCTCCTCCTCCGTCGTCGTCTTCTTTATCTTCCTACCTTCCTTCTCTCTCTTCGACACAATCGAGAACAATGGCGCACTGGCTTCCTCTAATGGCGTCTTCTCCTGCTTCCACGGGTTACGGTTCACCGGTTGATGAGTCCGACCAGGTTAAACTTACTCAGGTGGCTAAAAGACTAGAGAACACGGCGAGATATTTCAAAAGGTTGGGCACATTTGGGTTTTGGGGACAGCTAATATGCACGATTGTTTCTGCTGTGATTCTTTCATTTTCTGTTGTAGTCACTGGAAAGATCACATCGCCTGTTACCTTCTACGCTACTGCCGGTGGAATTGCTGCCGCTTTTATATCTGTTTTTTGGTCATTTGGTTACCTTAGGCTATCAGAGAAACTCCGCAAAACAGCAAATGACCCATCAAAGGCTCCCCCACGTGCTGATGTTGTCAGAAGTCTGAAAAATGGAATAGCTGTGAATCTGCTTGGTATGGGTTCTGCTATCCTGGGAATGCAAGCCACTGTAGGATTACTTGTGGCAAAGGCGCTCACTACATCTGCAAATCCTTACTATCAGGGTGTAGCCCCTGGAGCTAGCCCTGTTCTTGCTCTGGACGTGTTCTTGGTCCAGGCATCAGCTAACACTATACTGTCTCATTTCTTCGGTCTTGTTTCATCTTTGGAATTGTTGCGGTCAGTAACATTGCCTACTGGTCAAACTGCTCCTGTTGCCAAGACCGCTTAG

Protein sequence

MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo22253.1Spo22253.1mRNA


Homology
[Close]
BLAST of Spo22253.1 vs. NCBI nr
Match: gi|902160953|gb|KNA06499.1| (hypothetical protein SOVF_180500 [Spinacia oleracea])

HSP 1 Score: 530.4 bits (1365), Expect = 1.900e-147
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS 60
           MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS
Sbjct: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS 60

Query: 61  RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT 120
           RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT
Sbjct: 61  RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT 120

Query: 121 IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA 180
           IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA
Sbjct: 121 IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA 180

Query: 181 PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA 240
           PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA
Sbjct: 181 PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA 240

Query: 241 LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA
Sbjct: 241 LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 284
[Close]
BLAST of Spo22253.1 vs. NCBI nr
Match: gi|756179874|gb|AJK93572.1| (chloroplast protein TIC-21 [Suaeda glauca])

HSP 1 Score: 425.6 bits (1093), Expect = 6.700e-116
Identity = 235/288 (81.60%), Postives = 251/288 (87.15%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPS----SSSLSSYLPSLS 60
           MQTLLLPA R G+  P P  +T A  H SR++P  + F+SP  S    SSSLSS L  +S
Sbjct: 1   MQTLLLPAVRSGIPTPFPAKSTTALSHSSRQLPKLNHFISPLNSQCFLSSSLSSNLNHIS 60

Query: 61  STQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQ 120
           +  SR M H  PLMASS ASTG+ SP DESDQ+KL QVAKRL+NTARYFKRLGTFGFWGQ
Sbjct: 61  ALNSRNMVHLTPLMASSAASTGFASPADESDQIKLAQVAKRLQNTARYFKRLGTFGFWGQ 120

Query: 121 LICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTAND 180
           LICTIV+AVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLR+TAND
Sbjct: 121 LICTIVAAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRRTAND 180

Query: 181 PSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGAS 240
           PSKAP RADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQG+APG+S
Sbjct: 181 PSKAPARADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGIAPGSS 240

Query: 241 PVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           PVLALDVFLVQASANT+LSHFFGLVSSLELLRSVTLPTGQT  V KTA
Sbjct: 241 PVLALDVFLVQASANTLLSHFFGLVSSLELLRSVTLPTGQTGSVPKTA 288
[Close]
BLAST of Spo22253.1 vs. NCBI nr
Match: gi|731360192|ref|XP_010691678.1| (PREDICTED: protein TIC 21, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 393.7 bits (1010), Expect = 2.800e-106
Identity = 218/289 (75.43%), Postives = 243/289 (84.08%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLS-----SYLPSL 60
           MQTLLLPAAR G+ PP P VT AA  H SRR+     FLSPP S S LS     S+LPSL
Sbjct: 1   MQTLLLPAARSGIPPPFPAVTMAAQSHHSRRMRNFCCFLSPPNSLSPLSPPSSHSFLPSL 60

Query: 61  SSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWG 120
           +      M  + PLMAS     G+ SP DESDQ KL QVAKRLENTARYFKRLGTFGFW 
Sbjct: 61  TLKNPIKMVQFRPLMASG----GFSSPSDESDQAKLAQVAKRLENTARYFKRLGTFGFWA 120

Query: 121 QLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTAN 180
           QL+CT+V+AVILSFS+VVTGKI+SP TFYATAGGIAAAFISVF+SFGYLRL++KLR+TAN
Sbjct: 121 QLVCTLVAAVILSFSIVVTGKISSPATFYATAGGIAAAFISVFFSFGYLRLADKLRRTAN 180

Query: 181 DPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGA 240
           DPSKAPPRADVVRSLKN I VN++G+GSAILGMQATVGLLVAK+LT+SA+PYYQG+APG+
Sbjct: 181 DPSKAPPRADVVRSLKNAIVVNVIGIGSAILGMQATVGLLVAKSLTSSASPYYQGIAPGS 240

Query: 241 SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVT+P GQ +P AKTA
Sbjct: 241 SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTMPAGQASPAAKTA 285
[Close]
BLAST of Spo22253.1 vs. NCBI nr
Match: gi|747081830|ref|XP_011088208.1| (PREDICTED: protein TIC 21, chloroplastic [Sesamum indicum])

HSP 1 Score: 363.6 bits (932), Expect = 3.100e-97
Identity = 205/297 (69.02%), Postives = 235/297 (79.12%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISS-----RFLSPPPSSSSLSSY-LPS 60
           MQTLLLPAAR GV PP+P  T A    +SR +P  +     RF S P   SSLSS+ LP+
Sbjct: 1   MQTLLLPAARSGVAPPTPRCTAA----VSRTLPSDNARSFIRFSSTPDPHSSLSSFKLPT 60

Query: 61  -------LSSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKR 120
                  + S +SR        +AS P +  + SP DES++ KL QV+KRLENT+RYFKR
Sbjct: 61  TLALSYLIVSNRSRRT------LASPPIAAAFSSPTDESEKAKLAQVSKRLENTSRYFKR 120

Query: 121 LGTFGFWGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLS 180
           LG+FGFWGQL+CT+V+AVILSFS+V+TGK+TSP TFYATAGGIAAAFISVFWSFGY+RLS
Sbjct: 121 LGSFGFWGQLVCTVVAAVILSFSIVITGKVTSPATFYATAGGIAAAFISVFWSFGYIRLS 180

Query: 181 EKLRKTANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPY 240
           +KLR+TANDPSKAPPRADVVRSLKNGI +NLLGMG+AILGMQATVGLLVAKALTTSA PY
Sbjct: 181 DKLRRTANDPSKAPPRADVVRSLKNGIGLNLLGMGAAILGMQATVGLLVAKALTTSATPY 240

Query: 241 YQGVAPGASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           YQG+ PG SPVLALDVFLVQASANTILSHF GL  SLELLRSVTLP  +  P+ K A
Sbjct: 241 YQGIPPGNSPVLALDVFLVQASANTILSHFLGLACSLELLRSVTLPPSENVPIPKMA 287
[Close]
BLAST of Spo22253.1 vs. NCBI nr
Match: gi|641840892|gb|KDO59809.1| (hypothetical protein CISIN_1g0235982mg [Citrus sinensis])

HSP 1 Score: 357.1 bits (915), Expect = 2.900e-95
Identity = 198/291 (68.04%), Postives = 231/291 (79.38%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSR--FLSPPPSSSSLSSYLPSLSST 60
           MQTLLLPA R G+   SP    A+HL  +  + I +   FLS        S+ LPSL + 
Sbjct: 1   MQTLLLPAGRSGI---SPTAAAASHLRRAPSLNIGTNVSFLS--------SNSLPSLKTL 60

Query: 61  QSRTMA-----HWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGF 120
           QS ++A     H  P++ASS     + S  DES++ KL QV+KRLENTAR+FKR G+FGF
Sbjct: 61  QSSSLANRGSKHCFPILASSQIPPTFTSQNDESEKAKLAQVSKRLENTARHFKRFGSFGF 120

Query: 121 WGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKT 180
           WGQL+CT+VSAVILSFS+++TGK+TSP TFY TAGGIAAAFISVFWSFGY+RLSEKLRKT
Sbjct: 121 WGQLVCTVVSAVILSFSIIITGKVTSPTTFYCTAGGIAAAFISVFWSFGYIRLSEKLRKT 180

Query: 181 ANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAP 240
           A+DPSKAPPRADVV+SLKNGI VNL+GMG+AILGMQATVGLLVAKALTTSANPYYQG+ P
Sbjct: 181 ASDPSKAPPRADVVKSLKNGIGVNLVGMGAAILGMQATVGLLVAKALTTSANPYYQGITP 240

Query: 241 GASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           G SPVLALDVFLVQASANTILSHF GL+ SLELLRSVTLP  ++ PV + A
Sbjct: 241 GYSPVLALDVFLVQASANTILSHFLGLLFSLELLRSVTLPPSESIPVPRVA 280
[Close]
BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGR8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180500 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 1.300e-147
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS 60
           MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS
Sbjct: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLSSYLPSLSSTQS 60

Query: 61  RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT 120
           RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT
Sbjct: 61  RTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQLICT 120

Query: 121 IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA 180
           IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA
Sbjct: 121 IVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTANDPSKA 180

Query: 181 PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA 240
           PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA
Sbjct: 181 PPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGASPVLA 240

Query: 241 LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA
Sbjct: 241 LDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 284
[Close]
BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A0C5B952_9CARY (Suaeda glauca chloroplast protein TIC-21 mRNA OS=Suaeda glauca PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 4.600e-116
Identity = 235/288 (81.60%), Postives = 251/288 (87.15%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPS----SSSLSSYLPSLS 60
           MQTLLLPA R G+  P P  +T A  H SR++P  + F+SP  S    SSSLSS L  +S
Sbjct: 1   MQTLLLPAVRSGIPTPFPAKSTTALSHSSRQLPKLNHFISPLNSQCFLSSSLSSNLNHIS 60

Query: 61  STQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWGQ 120
           +  SR M H  PLMASS ASTG+ SP DESDQ+KL QVAKRL+NTARYFKRLGTFGFWGQ
Sbjct: 61  ALNSRNMVHLTPLMASSAASTGFASPADESDQIKLAQVAKRLQNTARYFKRLGTFGFWGQ 120

Query: 121 LICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTAND 180
           LICTIV+AVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLR+TAND
Sbjct: 121 LICTIVAAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRRTAND 180

Query: 181 PSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGAS 240
           PSKAP RADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQG+APG+S
Sbjct: 181 PSKAPARADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGIAPGSS 240

Query: 241 PVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           PVLALDVFLVQASANT+LSHFFGLVSSLELLRSVTLPTGQT  V KTA
Sbjct: 241 PVLALDVFLVQASANTLLSHFFGLVSSLELLRSVTLPTGQTGSVPKTA 288
[Close]
BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EDT6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223880 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.000e-106
Identity = 218/289 (75.43%), Postives = 243/289 (84.08%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSRFLSPPPSSSSLS-----SYLPSL 60
           MQTLLLPAAR G+ PP P VT AA  H SRR+     FLSPP S S LS     S+LPSL
Sbjct: 1   MQTLLLPAARSGIPPPFPAVTMAAQSHHSRRMRNFCCFLSPPNSLSPLSPPSSHSFLPSL 60

Query: 61  SSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFWG 120
           +      M  + PLMAS     G+ SP DESDQ KL QVAKRLENTARYFKRLGTFGFW 
Sbjct: 61  TLKNPIKMVQFRPLMASG----GFSSPSDESDQAKLAQVAKRLENTARYFKRLGTFGFWA 120

Query: 121 QLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTAN 180
           QL+CT+V+AVILSFS+VVTGKI+SP TFYATAGGIAAAFISVF+SFGYLRL++KLR+TAN
Sbjct: 121 QLVCTLVAAVILSFSIVVTGKISSPATFYATAGGIAAAFISVFFSFGYLRLADKLRRTAN 180

Query: 181 DPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPGA 240
           DPSKAPPRADVVRSLKN I VN++G+GSAILGMQATVGLLVAK+LT+SA+PYYQG+APG+
Sbjct: 181 DPSKAPPRADVVRSLKNAIVVNVIGIGSAILGMQATVGLLVAKSLTSSASPYYQGIAPGS 240

Query: 241 SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVT+P GQ +P AKTA
Sbjct: 241 SPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTMPAGQASPAAKTA 285
[Close]
BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A067EXD9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0235982mg PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.000e-95
Identity = 198/291 (68.04%), Postives = 231/291 (79.38%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSPVVTTAAHLHLSRRIPISSR--FLSPPPSSSSLSSYLPSLSST 60
           MQTLLLPA R G+   SP    A+HL  +  + I +   FLS        S+ LPSL + 
Sbjct: 1   MQTLLLPAGRSGI---SPTAAAASHLRRAPSLNIGTNVSFLS--------SNSLPSLKTL 60

Query: 61  QSRTMA-----HWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGF 120
           QS ++A     H  P++ASS     + S  DES++ KL QV+KRLENTAR+FKR G+FGF
Sbjct: 61  QSSSLANRGSKHCFPILASSQIPPTFTSQNDESEKAKLAQVSKRLENTARHFKRFGSFGF 120

Query: 121 WGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKT 180
           WGQL+CT+VSAVILSFS+++TGK+TSP TFY TAGGIAAAFISVFWSFGY+RLSEKLRKT
Sbjct: 121 WGQLVCTVVSAVILSFSIIITGKVTSPTTFYCTAGGIAAAFISVFWSFGYIRLSEKLRKT 180

Query: 181 ANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAP 240
           A+DPSKAPPRADVV+SLKNGI VNL+GMG+AILGMQATVGLLVAKALTTSANPYYQG+ P
Sbjct: 181 ASDPSKAPPRADVVKSLKNGIGVNLVGMGAAILGMQATVGLLVAKALTTSANPYYQGITP 240

Query: 241 GASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           G SPVLALDVFLVQASANTILSHF GL+ SLELLRSVTLP  ++ PV + A
Sbjct: 241 GYSPVLALDVFLVQASANTILSHFLGLLFSLELLRSVTLPPSESIPVPRVA 280
[Close]
BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Match: A0A068TMS2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014487001 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.000e-94
Identity = 204/290 (70.34%), Postives = 229/290 (78.97%), Query Frame = 1 

		  

Query: 1   MQTLLLPAARPGVLPPSP----VVTTAAHLHLSRRIPISSRFLSPPPSSSS--LSSYLPS 60
           MQTLL+PAAR G  P +P    V +  +  HL R    SS  L+P   S S  L ++ P 
Sbjct: 1   MQTLLVPAARSGTAPLAPPHSGVYSNPSLPHLLRLSHQSSLHLAPLSLSFSKLLKTHQPL 60

Query: 61  LSSTQSRTMAHWLPLMASSPASTGYGSPVDESDQVKLTQVAKRLENTARYFKRLGTFGFW 120
            S   S         +AS   ST Y +P D++++ KL QVAKRLE+T+RYFKRLG  GFW
Sbjct: 61  FSPQLSAFDNRLFKTLASGTVSTHYPAPNDDAEKAKLAQVAKRLESTSRYFKRLGGLGFW 120

Query: 121 GQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVFWSFGYLRLSEKLRKTA 180
           GQL+CT+V+AVILSFSVV+TGKITSP TFYATAGGIAAAFISVFWSFGY+RLSEKLRKTA
Sbjct: 121 GQLVCTLVAAVILSFSVVITGKITSPATFYATAGGIAAAFISVFWSFGYIRLSEKLRKTA 180

Query: 181 NDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAKALTTSANPYYQGVAPG 240
           NDPSKAPPRADVV+SLKNGI VNLLGMG+AILGMQATVGLLVAKALTTSANPYYQGVAPG
Sbjct: 181 NDPSKAPPRADVVKSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTTSANPYYQGVAPG 240

Query: 241 ASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTAPVAKTA 285
           +SPVLALDVFLVQASANTILSHF GLV SLELLRSVTLP  ++ PV K A
Sbjct: 241 SSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPPSESIPVFKAA 290
[Close]
BLAST of Spo22253.1 vs. ExPASy Swiss-Prot
Match: TIC21_ARATH (Protein TIC 21, chloroplastic OS=Arabidopsis thaliana GN=TIC21 PE=1 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.700e-80
Identity = 185/306 (60.46%), Postives = 221/306 (72.22%), Query Frame = 1 

		  

Query: 1   MQTLLLP-AARPGVLPPSPVVTTAAHLHL-------SRRIPISSRFLSPPPSSSSLSSYL 60
           MQ+LLLP A+  GV   S V       H        +R +P+ +  L  P   +++SSY 
Sbjct: 1   MQSLLLPPASSSGV---SAVALRPGFQHSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQ 60

Query: 61  --PSLS-----------STQSRTMAHWLPLMASSPASTGYGSPVD-ESDQVKLTQVAKRL 120
             PSLS           S    T+A   P   +SP+S     P D E D+ KL QVAKRL
Sbjct: 61  SPPSLSVYGFQIGGSKPSFTPSTVAFSYP---TSPSSV----PGDNEVDKAKLAQVAKRL 120

Query: 121 ENTARYFKRLGTFGFWGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVF 180
           E T+RYFKRLG+ GFWGQL+ T+V+AVILSFS+VVTGK TSP TFYATA GIAAAF+SVF
Sbjct: 121 EKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVF 180

Query: 181 WSFGYLRLSEKLRKTANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAK 240
           WSFGY+RLSE+LR+T+ DP+KAPPRADVV+ L++GI VN+LGMGSA+LGMQATVG LVAK
Sbjct: 181 WSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAK 240

Query: 241 ALTTSANPYYQGVAPGASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTA 285
           ALTTSANP+YQGV+ G SPVLALDVFLVQASANT+LSHF GLV SLELLRSVT+P  ++ 
Sbjct: 241 ALTTSANPFYQGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESV 296
[Close]
BLAST of Spo22253.1 vs. TAIR (Arabidopsis)
Match: AT2G15290.1 (translocon at inner membrane of chloroplasts 21)

HSP 1 Score: 298.5 bits (763), Expect = 4.300e-81
Identity = 185/306 (60.46%), Postives = 221/306 (72.22%), Query Frame = 1 

		  

Query: 1   MQTLLLP-AARPGVLPPSPVVTTAAHLHL-------SRRIPISSRFLSPPPSSSSLSSYL 60
           MQ+LLLP A+  GV   S V       H        +R +P+ +  L  P   +++SSY 
Sbjct: 1   MQSLLLPPASSSGV---SAVALRPGFQHSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQ 60

Query: 61  --PSLS-----------STQSRTMAHWLPLMASSPASTGYGSPVD-ESDQVKLTQVAKRL 120
             PSLS           S    T+A   P   +SP+S     P D E D+ KL QVAKRL
Sbjct: 61  SPPSLSVYGFQIGGSKPSFTPSTVAFSYP---TSPSSV----PGDNEVDKAKLAQVAKRL 120

Query: 121 ENTARYFKRLGTFGFWGQLICTIVSAVILSFSVVVTGKITSPVTFYATAGGIAAAFISVF 180
           E T+RYFKRLG+ GFWGQL+ T+V+AVILSFS+VVTGK TSP TFYATA GIAAAF+SVF
Sbjct: 121 EKTSRYFKRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVF 180

Query: 181 WSFGYLRLSEKLRKTANDPSKAPPRADVVRSLKNGIAVNLLGMGSAILGMQATVGLLVAK 240
           WSFGY+RLSE+LR+T+ DP+KAPPRADVV+ L++GI VN+LGMGSA+LGMQATVG LVAK
Sbjct: 181 WSFGYIRLSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAK 240

Query: 241 ALTTSANPYYQGVAPGASPVLALDVFLVQASANTILSHFFGLVSSLELLRSVTLPTGQTA 285
           ALTTSANP+YQGV+ G SPVLALDVFLVQASANT+LSHF GLV SLELLRSVT+P  ++ 
Sbjct: 241 ALTTSANPFYQGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESV 296
The following BLAST results are available for this feature:
BLAST of Spo22253.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902160953|gb|KNA06499.1|1.9e-147100.hypothetical protein SOVF_1805... [more]
gi|756179874|gb|AJK93572.1|6.7e-11681.6chloroplast protein TIC-21 [Su... [more]
gi|731360192|ref|XP_010691678.1|2.8e-10675.4PREDICTED: protein TIC 21, chl... [more]
gi|747081830|ref|XP_011088208.1|3.1e-9769.0PREDICTED: protein TIC 21, chl... [more]
gi|641840892|gb|KDO59809.1|2.9e-9568.0hypothetical protein CISIN_1g0... [more]
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BLAST of Spo22253.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QGR8_SPIOL1.3e-147100.Uncharacterized protein OS=Spi... [more]
A0A0C5B952_9CARY4.6e-11681.6Suaeda glauca chloroplast prot... [more]
A0A0J8EDT6_BETVU2.0e-10675.4Uncharacterized protein OS=Bet... [more]
A0A067EXD9_CITSI2.0e-9568.0Uncharacterized protein OS=Cit... [more]
A0A068TMS2_COFCA1.0e-9470.3Uncharacterized protein OS=Cof... [more]
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BLAST of Spo22253.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TIC21_ARATH7.7e-8060.4Protein TIC 21, chloroplastic ... [more]
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BLAST of Spo22253.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G15290.14.3e-8160.4translocon at inner membrane o... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022051Protein of unknown function DUF3611PFAMPF12263DUF3611coord: 96..270
score: 8.8
NoneNo IPR availablePANTHERPTHR34548FAMILY NOT NAMEDcoord: 1..284
score: 7.5E
NoneNo IPR availablePANTHERPTHR34548:SF2PROTEIN TIC 21, CHLOROPLASTICcoord: 1..284
score: 7.5E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006875 cellular metal ion homeostasis
biological_process GO:0007020 microtubule nucleation
biological_process GO:0006412 translation
biological_process GO:0051607 defense response to virus
biological_process GO:0006086 acetyl-CoA biosynthetic process from pyruvate
biological_process GO:0009072 aromatic amino acid family metabolic process
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0008652 cellular amino acid biosynthetic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0000096 sulfur amino acid metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0009657 plastid organization
biological_process GO:0016310 phosphorylation
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0032544 plastid translation
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0045727 positive regulation of translation
biological_process GO:0031425 chloroplast RNA processing
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0044237 cellular metabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0016075 rRNA catabolic process
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0016311 dephosphorylation
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0009060 aerobic respiration
biological_process GO:0006281 DNA repair
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0045040 protein import into mitochondrial outer membrane
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0006012 galactose metabolic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0030091 protein repair
biological_process GO:0006878 cellular copper ion homeostasis
biological_process GO:0055122 response to very low light intensity stimulus
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009113 purine nucleobase biosynthetic process
biological_process GO:0009116 nucleoside metabolic process
biological_process GO:0015721 bile acid and bile salt transport
biological_process GO:0035725 sodium ion transmembrane transport
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0031167 rRNA methylation
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006259 DNA metabolic process
biological_process GO:0009631 cold acclimation
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0009058 biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0015677 copper ion import
biological_process GO:0006606 protein import into nucleus
biological_process GO:0006364 rRNA processing
biological_process GO:0006508 proteolysis
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0030488 tRNA methylation
biological_process GO:0034599 cellular response to oxidative stress
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0033617 mitochondrial respiratory chain complex IV assembly
biological_process GO:0010478 chlororespiration
biological_process GO:0006338 chromatin remodeling
biological_process GO:0006334 nucleosome assembly
biological_process GO:0044030 regulation of DNA methylation
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009790 embryo development
biological_process GO:0006825 copper ion transport
biological_process GO:0009658 chloroplast organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0034622 cellular protein-containing complex assembly
biological_process GO:0006897 endocytosis
biological_process GO:0009409 response to cold
biological_process GO:0009737 response to abscisic acid
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0008380 RNA splicing
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043269 regulation of ion transport
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016571 histone methylation
biological_process GO:0019915 lipid storage
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0009933 meristem structural organization
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006007 glucose catabolic process
biological_process GO:0000338 protein deneddylation
biological_process GO:0016579 protein deubiquitination
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006096 glycolytic process
biological_process GO:0035434 copper ion transmembrane transport
biological_process GO:0034755 iron ion transmembrane transport
biological_process GO:0045037 protein import into chloroplast stroma
biological_process GO:0042793 plastid transcription
biological_process GO:0048440 carpel development
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0007030 Golgi organization
biological_process GO:0006833 water transport
biological_process GO:0006972 hyperosmotic response
biological_process GO:0006102 isocitrate metabolic process
biological_process GO:0006739 NADP metabolic process
biological_process GO:0009853 photorespiration
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0051049 regulation of transport
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0015031 protein transport
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009909 regulation of flower development
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0050826 response to freezing
biological_process GO:0009987 cellular process
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0006950 response to stress
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0006812 cation transport
biological_process GO:0015931 nucleobase-containing compound transport
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0006230 TMP biosynthetic process
biological_process GO:0009744 response to sucrose
biological_process GO:0009749 response to glucose
biological_process GO:0001676 long-chain fatty acid metabolic process
biological_process GO:0009750 response to fructose
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006839 mitochondrial transport
biological_process GO:0008152 metabolic process
biological_process GO:0006265 DNA topological change
biological_process GO:0051276 chromosome organization
biological_process GO:0010497 plasmodesmata-mediated intercellular transport
biological_process GO:1901679 nucleotide transmembrane transport
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0016556 mRNA modification
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0016441 posttranscriptional gene silencing
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0010048 vernalization response
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0015802 basic amino acid transport
biological_process GO:0015696 ammonium transport
biological_process GO:0043090 amino acid import
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009845 seed germination
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0010162 seed dormancy process
cellular_component GO:0009508 plastid chromosome
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005950 anthranilate synthase complex
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005694 chromosome
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0009295 nucleoid
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0010319 stromule
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0017177 glucosidase II complex
cellular_component GO:0005643 nuclear pore
cellular_component GO:0009501 amyloplast
cellular_component GO:0009507 chloroplast
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005840 ribosome
cellular_component GO:0031965 nuclear membrane
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009579 thylakoid
cellular_component GO:0010494 cytoplasmic stress granule
cellular_component GO:0016020 membrane
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0005835 fatty acid synthase complex
cellular_component GO:0005622 intracellular
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0005730 nucleolus
cellular_component GO:0000786 nucleosome
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009536 plastid
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005887 integral component of plasma membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0005886 plasma membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0005829 cytosol
molecular_function GO:0005507 copper ion binding
molecular_function GO:0005488 binding
molecular_function GO:0016597 amino acid binding
molecular_function GO:0005375 copper ion transmembrane transporter activity
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0004664 prephenate dehydratase activity
molecular_function GO:0047769 arogenate dehydratase activity
molecular_function GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0015391 nucleobase:cation symporter activity
molecular_function GO:0004797 thymidine kinase activity
molecular_function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity
molecular_function GO:0004049 anthranilate synthase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005381 iron ion transmembrane transporter activity
molecular_function GO:0004450 isocitrate dehydrogenase (NADP+) activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008266 poly(U) RNA binding
molecular_function GO:0017077 oxidative phosphorylation uncoupler activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0005515 protein binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0015215 nucleotide transmembrane transporter activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0034256 chlorophyll(ide) b reductase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0004809 tRNA (guanine-N2-)-methyltransferase activity
molecular_function GO:0000774 adenyl-nucleotide exchange factor activity
molecular_function GO:0051087 chaperone binding
molecular_function GO:0008836 diaminopimelate decarboxylase activity
molecular_function GO:0070191 methionine-R-sulfoxide reductase activity
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0004044 amidophosphoribosyltransferase activity
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0008508 bile acid:sodium symporter activity
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004467 long-chain fatty acid-CoA ligase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004558 alpha-1,4-glucosidase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0032450 maltose alpha-glucosidase activity
molecular_function GO:0003852 2-isopropylmalate synthase activity
molecular_function GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0043754 dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity
molecular_function GO:0015297 antiporter activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo079280.78Barchart | Table
Spo189080.76Barchart | Table
Spo272910.76Barchart | Table
Spo267270.76Barchart | Table
Spo168060.76Barchart | Table
Spo267360.75Barchart | Table
Spo030570.74Barchart | Table
Spo239060.74Barchart | Table
Spo168920.74Barchart | Table
Spo195000.74Barchart | Table
Spo268570.74Barchart | Table
Spo220060.74Barchart | Table
Spo029220.73Barchart | Table
Spo088790.73Barchart | Table
Spo107050.73Barchart | Table
Spo106240.72Barchart | Table
Spo167080.72Barchart | Table
Spo123770.72Barchart | Table
Spo028160.72Barchart | Table
Spo013840.72Barchart | Table
Spo246790.72Barchart | Table
Spo059690.72Barchart | Table
Spo227150.72Barchart | Table
Spo215010.72Barchart | Table
Spo022210.72Barchart | Table
Spo085990.72Barchart | Table
Spo192200.72Barchart | Table
Spo057330.71Barchart | Table
Spo038820.71Barchart | Table
Spo030270.71Barchart | Table
Spo077940.71Barchart | Table
Spo145230.71Barchart | Table
Spo085640.71Barchart | Table
Spo043770.71Barchart | Table
Spo173050.70Barchart | Table
Spo198590.70Barchart | Table
Spo138350.70Barchart | Table
Spo246900.70Barchart | Table
Spo165680.70Barchart | Table
Spo147470.70Barchart | Table
Spo150150.70Barchart | Table
Spo241530.69Barchart | Table
Spo046820.69Barchart | Table
Spo168840.69Barchart | Table
Spo063620.69Barchart | Table
Spo254510.69Barchart | Table
Spo272100.69Barchart | Table
Spo019700.69Barchart | Table
Spo071140.68Barchart | Table
Spo001780.68Barchart | Table
Spo008540.68Barchart | Table
Spo025190.68Barchart | Table
Spo027060.68Barchart | Table
Spo029640.68Barchart | Table
Spo044300.68Barchart | Table
Spo056800.68Barchart | Table
Spo001550.68Barchart | Table
Spo085330.68Barchart | Table
Spo148570.68Barchart | Table
Spo161060.68Barchart | Table
Spo181500.68Barchart | Table
Spo188050.68Barchart | Table
Spo189420.68Barchart | Table
Spo215310.68Barchart | Table
Spo223260.68Barchart | Table
Spo226660.68Barchart | Table
Spo227320.68Barchart | Table
Spo229930.68Barchart | Table
Spo268500.68Barchart | Table
Spo268510.68Barchart | Table
Spo048510.67Barchart | Table
Spo206120.67Barchart | Table
Spo162090.67Barchart | Table
Spo208890.67Barchart | Table
Spo051340.67Barchart | Table
Spo105860.67Barchart | Table
Spo172610.67Barchart | Table
Spo101360.67Barchart | Table
Spo221450.67Barchart | Table
Spo222840.67Barchart | Table
Spo174900.67Barchart | Table
Spo224750.67Barchart | Table
Spo005010.67Barchart | Table
Spo237670.67Barchart | Table
Spo270300.67Barchart | Table
Spo261950.67Barchart | Table
Spo182960.67Barchart | Table
Spo114360.67Barchart | Table
Spo184780.67Barchart | Table
Spo263020.67Barchart | Table
Spo168170.67Barchart | Table
Spo044530.67Barchart | Table
Spo126500.67Barchart | Table
Spo191960.67Barchart | Table
Spo149830.67Barchart | Table
Spo143530.67Barchart | Table
Spo168830.67Barchart | Table
Spo077680.67Barchart | Table
Spo247870.66Barchart | Table
Spo158410.66Barchart | Table
Spo259490.66Barchart | Table
Spo121430.66Barchart | Table
Spo168740.66Barchart | Table
Spo110520.66Barchart | Table
Spo183040.66Barchart | Table
Spo090270.66Barchart | Table
Spo192180.66Barchart | Table
Spo194740.66Barchart | Table
Spo208060.66Barchart | Table
Spo064990.66Barchart | Table
Spo030660.66Barchart | Table
Spo062870.66Barchart | Table
Spo005680.66Barchart | Table
Spo052300.66Barchart | Table
Spo154010.66Barchart | Table
Spo256710.66Barchart | Table
Spo256720.66Barchart | Table
Spo258740.66Barchart | Table
Spo133740.66Barchart | Table
Spo129590.66Barchart | Table
Spo140130.66Barchart | Table
Spo141590.66Barchart | Table
Spo144080.66Barchart | Table
Spo259130.66Barchart | Table
Spo231270.66Barchart | Table
Spo058620.66Barchart | Table
Spo244400.66Barchart | Table
Spo244750.66Barchart | Table
Spo013050.65Barchart | Table
Spo126100.65Barchart | Table
Spo061370.65Barchart | Table
Spo059680.65Barchart | Table
Spo087650.65Barchart | Table
Spo122190.65Barchart | Table
Spo129470.65Barchart | Table
Spo147410.65Barchart | Table
Spo210710.65Barchart | Table
Spo190980.65Barchart | Table
Spo074900.65Barchart | Table