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Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACATTATGGAACTTAGGTAGTACATAGTCCATTTATGGTCTAACTTTTTTTTCTATTTTGAGAAGTCGTATTTGGTGTTCGCTTGCCTACGGAGTACTACACGGCACCTTTCATCCTTATTGCTGAGCAGTCACTAGATCTGAACATTGATTTTAAAATTCAAATACTCTCATCTCAGAAAACATCCGTCAGTACAGTAGTAATCAAATAAGTTTGCTTAGATTTCACATTATTCACATTCCTTGAAACTTTAAAAATCTTAGATATGGACTAATCCCCGCGTAGACGCCTACCCAGTACCCACACACCCACCCACCCACCCACCCACCCACCACCTAATTATTTCTTCACGACCATGTTGAAGACCAATATCTCATCTTACCTGCATTGGATTTTGTTATTATCCTATACCTTGAATTTGGATCGAAGTAGTTGTGAGTTTAGATCCAATGATAAAACCATAATCTTACTAGCCGGGCAGAGCAACATGGCAGGACGAGGTGGCGTAATAAACGACAAATGGGACGGTATAATCCCGGAGGAATGCGGGCCAACCCCATCCATACTTCGCCTAGACGCGAAGCATCGATGGGTGGAGGCAACGGAGCCACTCCATCGGGATATTGATACTAATCATACTTGTGGGGTTGGGCCGGGTATGGCATTGGCCCATGCGGTAGTAAGGAAGTCTTTTGAGATTGGTACGGTGGGGTTAGTGCCTTGTGCTGTAGGTGGGACCAATATTAGTCATTGGTCTCGTGGTGGTCATTTGTATAATCAATTGATTAAAAGGGCAATGGCTTCATTGCGTGAGGGTGGGACTATTCAGGCTTTGGTTTGGTATCAAGGTGAGAGTGATACGCTTTTAAAACAAGATGCTGATGCGTATAACAGGAGATTGTTAAACTTCTTTTTAGATTTTCGGACGGACCTTCAGTCCCCTATGCTTCCAATTATTCAGGTACGCCCACTACTAATAAATCAATCTCCCATATTAAATTAGTGTCCATGTTGTTTTCGTCATATTTTAAGTAAGGCTGTTAGTGTAATTTTTTTAACTTCATTTAGAATTATACACTTTAGTATGCTGATTTTATTTTATTAAAATAACATGGAATTATACATTTTAGTATGCTGATTTGATTTTATTAACTATACATAATGAGTGGATTATATATTGTAGGAAAAAAAATGATGTATTAAAAAAAATGATGTTGAGACTATGAGAAGATAACGACAAACATAACGGATTAATTGGGAGTGGGGATCATGAAAAACCAAAAATAGAAAATGTAACTGATACTAAAATATGACCGTTTTTAAAAATACGTATTAAAATAAGGAGGCAGCAGCCGATTGTGCTTGTCATAAAAAGTCATGTATACTCATTTTATTACAAGTTACACAGTTTATTTTACTTGATATAGAATTTCTGTGGAATCATACACTTGAATTTGGAATAATAGCCAATTGGGCTTGGCTAATAAAAGTTATGCATGTCATGTAAAAATGTAAAATGTTCCTAGATTTTTTACTCATTTTATTATCCAAAATTTGGTTCTATTGCCGGTCTATATATATGAAATTACGGAGTAATAGCTATTGACAAAATGATTCCGTTATTAATAGTTGGGGCCGTATTGTGTTTTCATGTGGGGTTTGCTACTTCGTGTAAAAGGTGCTATACTATTTTGATATTGCTGTTCAGTTTGAAATTTGAACTTTTTTGGGAAATCACTTTCTTAAAATTATTTACCAAGGGAAACACTCTATAAATTACAAATGGGGTTGAGATTTAAAGTTGTGACTTATCATACACTGGTTGTTAGTCTTAATTATTAGGTTATGAACTCATTGACTTCCTAGATTTTTTTTCAAGCATAAGAGTAATAAAGTTATATTTCAAAAATTGCCTTGGCATCATGGCTATCAACTACTCGTATTAGCTAATACTCTATCCGTATTTTAAAAACAGATACACTTTCTTTAAATGACCGTATTTTAAAATGGGATACACTTTATTTTTCTTTTGACATGTTTTGGTCTCCACTTCCAATCATATTAATGTTTCTCTCTTTGTTGTGACTCTCACACTTACTCACATCATGTTTTTACTATAATAAATAATTCAACCACTATCCCACTTTCATCTTATTTTAATAAATTCAGCTCACTCTCCTAAAACTACGTGCCGATCAAAGTGTATTTCTTTTTAAAATACGGAGGGAGTACTTGGAATACTTATTACTTGTATTATTATTGATTTCATAAAATGTTAACACTTATAATATAGGATGTGAGGAAAAATAGTTTGTAAATAGATTTCATAAAATGTCAAACACTTGATCAAAATCGGAATTCGTTGAGCGGGGAAAGAGAACAAAAACGATACAACAATAGGAGGCGAGTATATAATATAGCTAGTACTAGTGTGGCAACTTGGCAAGTCTACATCTCCCTCTGCATTCAGGGCGTTAAGAGTCGTTTTTAACCTTTTGATCATACCACACTAAGGAGATTGAGAGATTCTATATGTGGTTGATGGAAATTGGGTTGTTTTTCAGTCATAAATCACCTGATTAAAACCCAAGTGTTTGGTTGTCAAAGCAGTAACTTGATGCGTCATAAAAATTGTATTTGTTGAATGCAGGTTGCCATAACATCAGGAGAAGGGCGTTTTATAGAAGACGTGAGGCAGGCTCAGATGGCAGTTGATCTTCTGAATTTCCAGACAATTGATGCCAAAGGATTGCCCTTAGAGCCAGATAACTTGCATCTCACTACGCCAGCACAAGTCCAACTTGGACAGCAATTGGCCCATGCCTTTTTGCACTTCCTCCCTGGACAAGTACAAACTAATGCTGGCAGTTTGTTGGTACAGAATGCTGCACCTAGTATTTCACACTATAATTTCTTTTACACCGCTCTTATTGCTTCAATTATTCTTATTTATCACATTTCACTACCAGTACATATACTATAGATTATTCATTTACGGGTCCTCGACTTTATACACTTTTAAATAATTGTTGTACCAAAAATTATTTTTTATATTTTATTTTTTCAAATTAATTGTTGGATATTAAAAAGAAATATCAATTGAAAGGTGAAACATCACAAAGCAAAAAAAAACATTATGGAACTTAGGTAGTACATAGTCCATTTATGGTCTAACTTTTTTTTCTATTTTGAGAAGTCGTATTTGGTGTTCGCTTGCCTACGGAGTACTACACGGCACCTTTCATCCTTATTGCTGAGCAGTCACTAGATCTGAACATTGATTTTAAAATTCAAATACTCTCATCTCAGAAAACATCCGTCAGTACAGTAGTAATCAAATAAGTTTGCTTAGATTTCACATTATTCACATTCCTTGAAACTTTAAAAATCTTAGATATGGACTAATCCCCGCGTAGACGCCTACCCAGTACCCACACACCCACCCACCCACCCACCCACCCACCACCTAATTATTTCTTCACGACCATGTTGAAGACCAATATCTCATCTTACCTGCATTGGATTTTGTTATTATCCTATACCTTGAATTTGGATCGAAGTAGTTGTGAGTTTAGATCCAATGATAAAACCATAATCTTACTAGCCGGGCAGAGCAACATGGCAGGACGAGGTGGCGTAATAAACGACAAATGGGACGGTATAATCCCGGAGGAATGCGGGCCAACCCCATCCATACTTCGCCTAGACGCGAAGCATCGATGGGTGGAGGCAACGGAGCCACTCCATCGGGATATTGATACTAATCATACTTGTGGGGTTGGGCCGGGTATGGCATTGGCCCATGCGGTAGTAAGGAAGTCTTTTGAGATTGGTACGGTGGGGTTAGTGCCTTGTGCTGTAGGTGGGACCAATATTAGTCATTGGTCTCGTGGTGGTCATTTGTATAATCAATTGATTAAAAGGGCAATGGCTTCATTGCGTGAGGGTGGGACTATTCAGGCTTTGGTTTGGTATCAAGGTGAGAGTGATACGCTTTTAAAACAAGATGCTGATGCGTATAACAGGAGATTGTTAAACTTCTTTTTAGATTTTCGGACGGACCTTCAGTCCCCTATGCTTCCAATTATTCAGGTTGCCATAACATCAGGAGAAGGGCGTTTTATAGAAGACGTGAGGCAGGCTCAGATGGCAGTTGATCTTCTGAATTTCCAGACAATTGATGCCAAAGGATTGCCCTTAGAGCCAGATAACTTGCATCTCACTACGCCAGCACAAGTCCAACTTGGACAGCAATTGGCCCATGCCTTTTTGCACTTCCTCCCTGGACAAGTACAAACTAATGCTGGCAGTTTGTTGGTACAGAATGCTGCACCTAGTATTTCACACTATAATTTCTTTTACACCGCTCTTATTGCTTCAATTATTCTTATTTATCACATTTCACTACCAGTACATATACTATAGATTATTCATTTACGGGTCCTCGACTTTATACACTTTTAAATAATTGTTGTACCAAAAATTATTTTTTATATTTTATTTTTTCAAATTAATTGTTGGATATTAAAAAGAAATATCAATTGAAAGGTGAAACATCACAAAGCAAAA ATGTTGAAGACCAATATCTCATCTTACCTGCATTGGATTTTGTTATTATCCTATACCTTGAATTTGGATCGAAGTAGTTGTGAGTTTAGATCCAATGATAAAACCATAATCTTACTAGCCGGGCAGAGCAACATGGCAGGACGAGGTGGCGTAATAAACGACAAATGGGACGGTATAATCCCGGAGGAATGCGGGCCAACCCCATCCATACTTCGCCTAGACGCGAAGCATCGATGGGTGGAGGCAACGGAGCCACTCCATCGGGATATTGATACTAATCATACTTGTGGGGTTGGGCCGGGTATGGCATTGGCCCATGCGGTAGTAAGGAAGTCTTTTGAGATTGGTACGGTGGGGTTAGTGCCTTGTGCTGTAGGTGGGACCAATATTAGTCATTGGTCTCGTGGTGGTCATTTGTATAATCAATTGATTAAAAGGGCAATGGCTTCATTGCGTGAGGGTGGGACTATTCAGGCTTTGGTTTGGTATCAAGGTGAGAGTGATACGCTTTTAAAACAAGATGCTGATGCGTATAACAGGAGATTGTTAAACTTCTTTTTAGATTTTCGGACGGACCTTCAGTCCCCTATGCTTCCAATTATTCAGGTTGCCATAACATCAGGAGAAGGGCGTTTTATAGAAGACGTGAGGCAGGCTCAGATGGCAGTTGATCTTCTGAATTTCCAGACAATTGATGCCAAAGGATTGCCCTTAGAGCCAGATAACTTGCATCTCACTACGCCAGCACAAGTCCAACTTGGACAGCAATTGGCCCATGCCTTTTTGCACTTCCTCCCTGGACAAGTACAAACTAATGCTGGCAGTTTGTTGGTACAGAATGCTGCACCTAGTATTTCACACTATAATTTCTTTTACACCGCTCTTATTGCTTCAATTATTCTTATTTATCACATTTCACTACCAGTACATATACTATAG MLKTNISSYLHWILLLSYTLNLDRSSCEFRSNDKTIILLAGQSNMAGRGGVINDKWDGIIPEECGPTPSILRLDAKHRWVEATEPLHRDIDTNHTCGVGPGMALAHAVVRKSFEIGTVGLVPCAVGGTNISHWSRGGHLYNQLIKRAMASLREGGTIQALVWYQGESDTLLKQDADAYNRRLLNFFLDFRTDLQSPMLPIIQVAITSGEGRFIEDVRQAQMAVDLLNFQTIDAKGLPLEPDNLHLTTPAQVQLGQQLAHAFLHFLPGQVQTNAGSLLVQNAAPSISHYNFFYTALIASIILIYHISLPVHIL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22066.1 vs. NCBI nr
Match: gi|902234602|gb|KNA23509.1| (hypothetical protein SOVF_024230 [Spinacia oleracea]) HSP 1 Score: 546.6 bits (1407), Expect = 2.800e-152 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
BLAST of Spo22066.1 vs. NCBI nr
Match: gi|731314814|ref|XP_010688553.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 464.9 bits (1195), Expect = 1.100e-127 Identity = 231/299 (77.26%), Postives = 260/299 (86.96%), Query Frame = 1
BLAST of Spo22066.1 vs. NCBI nr
Match: gi|719970312|ref|XP_010271049.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Nelumbo nucifera]) HSP 1 Score: 323.2 bits (827), Expect = 5.100e-85 Identity = 151/236 (63.98%), Postives = 180/236 (76.27%), Query Frame = 1
BLAST of Spo22066.1 vs. NCBI nr
Match: gi|643735012|gb|KDP41682.1| (hypothetical protein JCGZ_16089 [Jatropha curcas]) HSP 1 Score: 320.9 bits (821), Expect = 2.500e-84 Identity = 154/275 (56.00%), Postives = 198/275 (72.00%), Query Frame = 1
BLAST of Spo22066.1 vs. NCBI nr
Match: gi|502133556|ref|XP_004501807.1| (PREDICTED: probable carbohydrate esterase At4g34215 [Cicer arietinum]) HSP 1 Score: 318.2 bits (814), Expect = 1.600e-83 Identity = 151/242 (62.40%), Postives = 186/242 (76.86%), Query Frame = 1
BLAST of Spo22066.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RX51_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024230 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 2.000e-152 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
BLAST of Spo22066.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D4S7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g015570 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 7.600e-128 Identity = 231/299 (77.26%), Postives = 260/299 (86.96%), Query Frame = 1
BLAST of Spo22066.1 vs. UniProtKB/TrEMBL
Match: A0A067KZS9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16089 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.800e-84 Identity = 154/275 (56.00%), Postives = 198/275 (72.00%), Query Frame = 1
BLAST of Spo22066.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NDW6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12282 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 1.100e-83 Identity = 151/267 (56.55%), Postives = 189/267 (70.79%), Query Frame = 1
BLAST of Spo22066.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PA77_GLYSO (Putative carbohydrate esterase OS=Glycine soja GN=glysoja_019561 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 5.700e-83 Identity = 158/283 (55.83%), Postives = 201/283 (71.02%), Query Frame = 1
BLAST of Spo22066.1 vs. ExPASy Swiss-Prot
Match: CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=2) HSP 1 Score: 254.6 bits (649), Expect = 1.400e-66 Identity = 131/234 (55.98%), Postives = 156/234 (66.67%), Query Frame = 1
BLAST of Spo22066.1 vs. TAIR (Arabidopsis)
Match: AT3G53010.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 267.7 bits (683), Expect = 9.000e-72 Identity = 138/267 (51.69%), Postives = 176/267 (65.92%), Query Frame = 1
BLAST of Spo22066.1 vs. TAIR (Arabidopsis)
Match: AT4G34215.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 254.6 bits (649), Expect = 7.900e-68 Identity = 131/234 (55.98%), Postives = 156/234 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22066.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22066.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22066.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo22066.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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