Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATAACAATATGAACAACAACAATAATATTATTGAGGTTCAAAGGCAAGAATCCTTAAAAAGAAGATGGCATGATAGTTTCTACACTAGACTTCTTACTTCACCCGCCCCTACTAACCCTACTACATCTGCGGCCGCGGCAACGCCCGCATTAATCATAGGTAAACCACCTCACCACCACCACCACCACCATCATCACTTTCTCCAACCAGGGAGGTTGTTGGATGGTGGCGGCGGTGGAGATCTAGTCCTTAATGTAATTCCCTCGGTCACGGTTGTGCTTGAGGGTCGTTCGATCTGTCACCGTATAAACCTCCAAAACCATGGTAGTTACCAAAGCCTAGCTAAAGCTCTTAGACAAATGTTTGTGGAAATTGCAAATATTCAACAAAATGAGGATGAAAGTGATGGGCAATTTGATTTGTCGAATGCTGTTCCTGGTTATGTTATTGCTTATGAAGATATGGAGAATGATCTTCTTCTTGCTGGTGATCTTCAGTGGAAGTACGTTTTTTTTCCTCTTTATTTTTTCCATATTCGCGAAATTTATTTATATATTTATTTAATGATGTTCGTTTATTCATTTATTCATTGTTAGGAAGATATTTTGAAATTTTAGGGGTGCCTTTTATATGATTTGAATTAGAGAAAATTAGGATGAAAAATATTACTACAAGTAGTAATATATACTTGTGATACTGTAGTGATTCATGGATTTTCTTTCTTTATTTATTTATTTATTTACGAACAATAATACAAGAATTTTCAATGTCGATAAACATTATTAATGAAGTTTATTAATCCGTATAATATTTAGAAAGGATTTAATGAAATAAATTAAGAAAGCAAAAATTGGAGTAGTGTTTTAATTTTTTCATACATGCAATAATTGTCTTGAAAATTATGATACCATTAAACTTATTTAAAGTACATTAGGTATACTTATGTACATACTGAGTATATCATTTACATTTACATGATATCACCAATAATATTAATCATAATATTTTCAAATAAAAATAAAATACTAATCATAAAATGCTTAAAGGGAAATAGAGAAAATACTTTGTACGAATATTAATTTTAATTATAAATTGTATTTGGTCAATCCTTTATTTTATTTTATTTAACTCGTCTTATTGAAATTAATTACTCCCTCCGTATTTTTTTAAGAGATACACTTGCCTTTTCCGGCCGTATTTTTTTAAGAGATACACTTGCCATTTTTGGTAACTTATCAACCCCACCACCTAATTAAATAATATATCTACTACACTTTATGACCCACCATCCAATTAAAAAATAATTTTACAACTACACCCACCCCACCCCCACCTCCACTTGTTCAAAAGGACATGGTCCCCAATGTACTTATTTATTAAAATATCTACCACAACCCCACTTCTTTTATTCTTCTTAAGACCCGTGCCCAACCAAGTGTATCTCTTAAAAAAATACGGAGGGAGTACTTATTTTCTGAAGTAAATGTAGATAAGATGAACAGAACAAACAATTATTGTATTTGGACATAAACTTTTGATAGGTGTTATTAATCACACTAGATATCGACATAACTATTAACTCCAATAAACACGTAAGAAGTACGTGGTAAAGCGAAATTAAAAAGGTGAGACTGGATCGAGCTGAGCCGAGCCGAAACGAGCATGTAGAAATTATGGAGGGATGGATATAGCACCTTAATATATAATAAGTGTTCTGGGACACTGATATTCTGGAAAATATGTTTAATGTGTTTGTGCACCAACATATATATTTAAGTAGTCTGTGGAAATGTCAATACATAATTTTAATTTGGTCCCAAAAGTTGTCCTCTGATCTGCTGTGAACTTTGCTTTAATTAATTTTAGAGCACCAAGAGTTAAATAGTTATTGTGCACTACTCCGTATGTTATAACATTAACACCCTTAATATTATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATGTAGGTGATTTTATTACATGAAACTATCCAACTTCCCCCCTACCACTGCTGGATTATTATTTACTTGAGTTAGGTGATTGACACCATAATTAATCATCCATTTAAACCTACGGACCTCGAGAGGTATGTAGAGTCTTTACTACGAGTATCATTTAATTTTAGCATATAACCTGTCTTTTTGGCGATAATTACCTAGCCATCTTCAAACAGTGTTCAAGTCGCATAAGTAAAGTTTTAGCCTTTTAGGGTTGACGTATGAAAGATGACGTACATGTACTCCGACTTGAGTATGATTGACTATATTAAGTTCTTTAGGTTATGTATATGTTTATATAACCTGTCTTTTTGGCGGTATATATGGACGATCACCACCTTACCTACTTTAAAACAGTGTTCAATTCGCACAAGTAAAGTTCTTTAGGTTATGTATATGTATAACCTGTCATTTTGGGATATATATATATGAGCTTTTACCGCCTCACCTACTTTGAAACATAGTTCAAGTCTTAGAAGTAAAGTTTTAATAAAACTCTACAAAGTAGGGGATTTTGAAAAGATAATATATGAGCCGTTGATTTTCCATTCAATGGTTGATATTGCTCAAATTCTACCTTATAGAGTTATTTTAGTACTCTAGAGGATCCAAAACCATTAAGTTGACGAGTATTTTTAGGTTTAGAATGAAGGTTTTTTCAGAAAAAAAAAGTTTAAGAATGAAGGTTTACCTAGAAGATGCGTAATAAATTAGAGCACCCTTTCCATTTTGAGTTTAGGTAACCTTGATTAAGGGAGAAAATTGGACTATTGGCATGCGTGCCTCTTTTTTGAGGAAAAGAGAGGGAGAAATATTTAAATATCTGAGATCATGATCGACCTTATTACATGTGGGGAAACGATAAATCCAAGGAAGAATTTCACTTTTTCCAAGGAAATCAACTTAAAAAAATTTGGATTTCCTTGAAAGAAGTAAAATTTTCCTTGGATTTATCATTTCCCTTACTGACATGTGTTGTTGACTAAGAATAATCTTGTTACGTGTGGTGTTGACTAACAATGACTTCACAAGTAGATTAATTATTTTCTGCCATATAATTAATGTTAAGTATATTTTTAAGTCGGCTATTTATTTTTCATATAATTAATCGAATGGGATGGATCACATATAACTAATGGTTGATGTGATTATTGTGAATCATGCAATAGGAAAGGGGATTCACGAGAAAGGCATTACGTACACAAAAAACATATTTGGAAACTATAGGTTTCGTCCGCCTGGTATTATAAAGTATCAAATGTGAGAAGAAATAGATCTTGTTGTTGTTTATTTGATGCCAATGTATGTCAATAAGTCATCATGAAACTATATTAGTTATGACGTACCACTATACATACATGTTATTATGTTAACACAAACCAACATGCACGTTAGTGGGCAACTCATCTTATGGTTTAGATCAAGGGTTACAAGGTCGAGCCCCATTAACCATGTAATGCTTAATTGGGAGTGACTTAAACATAAATTTGCGTAACTGGTTTAGCTATCATAAGATAGATGATAGTTCAATAGGATCCTTCTTTTTATCTAATAATAAAAAATATATGTTATTCGTTCTTCATAAGAAGGATTGAGTTAATTAGCTAATTGATCCACAAGTGGATATTTTATAATACCATAAGTCCATCAACAATCAACAAGCATGATTTCTTTAGTTTGAAGGAAGTTTATTAGGATGATTCAATTCTTGCCCTAGAATAAAGCCTTTTACTTCTTCCAAGGATTCAAGGTACCAAGTAACCGGCCTACTATTACATTCCAAGAATGCGTGGTATTCGCTACTCTATCCGAATTTTTTTAGGATTTACCATTACTATATCTGGTCATTTTTTTTTTTTGGAAAATTTAACATTAATATCTCAACTTTCACTAATCTTCTCATTTTGGAATAATCTCAACTTTCGGGTAAATCTTCTTTAAATAATATAAACTATCCATTTGTCTATGTACAATAGACCCAAAATGATTTAGAAATGTCAGAAAAATAAGATTTCAGATTATTTTGAGAAGATAACCTCAAAAGTTTGGATTACTCAAAAATAATCCAAAGTTGAAAGTTGGGATTACACAAATTCTTATTTACATGAGGTGTACGATAAATATTGTATACCGAAGTTAAAGTTGACGTAAAATGCTTAAAAGTCACCATTATATAGGTAAAAGTTATCTACTTTTTAGTAATAAAAATTTTCATTTTAATAAAAAATATTTATTCAAAATCACTAATAATGTATAAAATTAATCATTTAACACTTTAAAATGTTTATCTATTAACTTTTTTTGTAATAGTATAAAAGTTAGAGAAAACTGAGTAAAAGTTAGAGAAAACTAGATTAAAGTTATGTTGGTGCACAATAAATTTATTGTACAACTTGTGCACGCAAGACCTTTTGTTGAGATTATTCATGTCAATTTTTCCTATTTTTTTAAGAGTTACAATTTCATTTTTGTTAAGTTTTACGCTTCACTACTCAATTGTTTATTATTTTTTAGTTTCTTATAGGCCCCTCTGAAATCATAAAGAATTTTATTTCTGGTTTTATGTTCTATTCCGTTTTCTTTGATTAATTTTTTTTTCTCACTTGCATTATTATCATATCAAATTTAACCAAGTTTCCTCAATATATACAAGTCAACTTGTAATTCCTAAAATATCCGGAGATAATAGTACTATATAATCCCCTCATTTTATGGTTATACGTAGTACGATGCAATATGTTACGTAAGTTTAAGATATCTCACACGTACTATAAAATGAAAACAACAATCTATTTGTAATTTAGAGCTGTCAAAACAAGTCATTGAGTCGGGTTTGGATCGGGTCATTTCGTGTCTCGGGTCATAATCAGGTTGGGTCGTGTCGGGTCAATATACCATCTGGGTTGAGTTCGGGTTCGGTCGGGTCGATATCAGGTCGGGTCATGTCGGGTTTTTTCCTATCCCGGTTTCAGGTCGGGTTCGGGTAGGGTCACATTTCGGTCAGGTTTGATTTCGGGTTCGAGTCTTATCAGGTCGGGTTTAAGTTGGTTTGTAGCAGATAATTTTCGGGTTTGGGTCTTATCGAGTCGGGTTTAATTCGGTTTGCAACATAGTTATTTTCGGGTTCGGGTCTTGGTTTGGATCGGATAATAATTGGATCAGATAGAATTCAGGTCGGTTCACTCTCGGGGACGGGTCAAACTCAGGTCTGATAATTAACCTATACATTTTAATTATTTTATATTGTAAAAAATATTGTTTAACTTATTTTAGAGTTAAATTTTATATAGACCAAATAATCGCGTGTTTTTGTCAAGTCAATATATATATAAAGTGAATATGGATTACGAACCAATGATCGATTTGGTTATCTCAAAATGTGAAAGTGAAAAACATTTACTCCCGCAACTCCAATTTCATTTTTGTAATGAGGGGTAAGTTAGTGGGTCACGTGCCAATGCGAGTCTCCTGTGTGATAGTGTAACCGTTTTTCTCGTTGTTGAGCACATTGACATAGGTCGCGCAGACAAAGAGAAAGAATGTCAGTTAGGATGTTAGATTCAATTCTTACCTCTCATCTCATCCAAATTGCAAAAAATAACTCGAAATTATTGTAAAAACAAAAAACAAGTTTTACTTTGCTTAATTTTGTTTCTTTATATAAAAACGTTAAGTTGTTCAACACGTTTAAATTTTTCGCTTTTTAATTTTTCAGTATCTAGTAATAAATAATTAAAATAGATTTATAGTTGAAGTTAATATTTGGTCGTGTCAATGACAAGTCGGGTTATTAACAGATCGGATAAATCGGGTAGCGGGTTGTCACAGGTTGAGTCAATAACAGGTTTCATCGAGTTACAATCGGTTTCTGGTTGACATCGGGTCTGGTATCGAATCGGGTTCGGGTCATTGTCGGTCGGGTCAGTTCGGTTTTCGGTCATTTTTGGGTCGGGTATCGGGTTCGGGTTCGGATGTTACAACATCGGGTTGAAATCGGTTATCGGTTTTTTCGGGTCGGGTACAGGTCGGGATTCGGATTACCTGTTTTACCGTAATTTGGGTCATGGTCGGTCACGGGTTCGATCGGTTCAGGTCGGATTTTCAGATCGGGTCAGTTTTTGACCGCAAATCAACTTCGGCTACTCTTATTCTCAATTGCTTTCAAGATTTGAACCTTGTTATATAAGTTATTATAAATTTAAGCATCGTTACGTTTGTGGAAAACGAGATCGAATTTATGGGCTCGTACTAGAGAGGGAAATTGTCTCTCTTTCATTATCTCTTACAATAGATGAATGAATTTATGGGCTCGTACTAGAGAGGGAAATTGTCTCTCTTTCATTATTTCTTACAATAGATGAATAAAATTGTAGGAAACTTAATTTCAAGAGGTAATATAAACCTATAATATTGTAACATTAAACTCATATTCTAACATTAATTAATTTTGGATTATTTGTGGGGCAGGGATTTTGTACGAGTGGCAAAAAGAATAAGGGTATTGCCGGTGAAGTCAAGTTCAAGGAAGCAGAAGACCACTAAACACTAGTCCAAGGCTCCTCATTGTAATGCTACAAGATATTCTAGCTAGCTTTATTGTTAAGAGTCCTGATCGTTTTTTTTTTCAATTTTCTTATTGAAAATTAGATAGAAAAATATGAACATTACAGACAATAGTTTATAGTTTTTTGTGGTTCACTTTTAAATCACGATGATTATTATAACGATGACTAGTTTTAAATTTATAAATCATAATTCAACTGAAATAATACAACTCCA ATGTATAACAATATGAACAACAACAATAATATTATTGAGGTTCAAAGGCAAGAATCCTTAAAAAGAAGATGGCATGATAGTTTCTACACTAGACTTCTTACTTCACCCGCCCCTACTAACCCTACTACATCTGCGGCCGCGGCAACGCCCGCATTAATCATAGGTAAACCACCTCACCACCACCACCACCACCATCATCACTTTCTCCAACCAGGGAGGTTGTTGGATGGTGGCGGCGGTGGAGATCTAGTCCTTAATGTAATTCCCTCGGTCACGGTTGTGCTTGAGGGTCGTTCGATCTGTCACCGTATAAACCTCCAAAACCATGGTAGTTACCAAAGCCTAGCTAAAGCTCTTAGACAAATGTTTGTGGAAATTGCAAATATTCAACAAAATGAGGATGAAAGTGATGGGCAATTTGATTTGTCGAATGCTGTTCCTGGTTATGTTATTGCTTATGAAGATATGGAGAATGATCTTCTTCTTGCTGGTGATCTTCAGTGGAAGTACGGATTTTGTACGAGTGGCAAAAAGAATAAGGGTATTGCCGGTGAAGTCAAGTTCAAGGAAGCAGAAGACCACTAAACACTAGTCCAAGGCTCCTCATTGTAATGCTACAAGATATTCTAGCTAGCTTTATTGTTAAGAGTCCTGATCGTTTTTTTTTTCAATTTTCTTATTGAAAATTAGATAGAAAAATATGAACATTACAGACAATAGTTTATAGTTTTTTGTGGTTCACTTTTAAATCACGATGATTATTATAACGATGACTAGTTTTAAATTTATAAATCATAATTCAACTGAAATAATACAACTCCA ATGTATAACAATATGAACAACAACAATAATATTATTGAGGTTCAAAGGCAAGAATCCTTAAAAAGAAGATGGCATGATAGTTTCTACACTAGACTTCTTACTTCACCCGCCCCTACTAACCCTACTACATCTGCGGCCGCGGCAACGCCCGCATTAATCATAGGTAAACCACCTCACCACCACCACCACCACCATCATCACTTTCTCCAACCAGGGAGGTTGTTGGATGGTGGCGGCGGTGGAGATCTAGTCCTTAATGTAATTCCCTCGGTCACGGTTGTGCTTGAGGGTCGTTCGATCTGTCACCGTATAAACCTCCAAAACCATGGTAGTTACCAAAGCCTAGCTAAAGCTCTTAGACAAATGTTTGTGGAAATTGCAAATATTCAACAAAATGAGGATGAAAGTGATGGGCAATTTGATTTGTCGAATGCTGTTCCTGGTTATGTTATTGCTTATGAAGATATGGAGAATGATCTTCTTCTTGCTGGTGATCTTCAGTGGAAGTACGGATTTTGTACGAGTGGCAAAAAGAATAAGGGTATTGCCGGTGAAGTCAAGTTCAAGGAAGCAGAAGACCACTAA MYNNMNNNNNIIEVQRQESLKRRWHDSFYTRLLTSPAPTNPTTSAAAATPALIIGKPPHHHHHHHHHFLQPGRLLDGGGGGDLVLNVIPSVTVVLEGRSICHRINLQNHGSYQSLAKALRQMFVEIANIQQNEDESDGQFDLSNAVPGYVIAYEDMENDLLLAGDLQWKYGFCTSGKKNKGIAGEVKFKEAEDH Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22004.1 vs. NCBI nr
Match: gi|902228795|gb|KNA21263.1| (hypothetical protein SOVF_044910 [Spinacia oleracea]) HSP 1 Score: 336.7 bits (862), Expect = 2.800e-89 Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of Spo22004.1 vs. NCBI nr
Match: gi|731354262|ref|XP_010688488.1| (PREDICTED: auxin-responsive protein IAA33 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 233.4 bits (594), Expect = 3.300e-58 Identity = 126/182 (69.23%), Postives = 143/182 (78.57%), Query Frame = 1
BLAST of Spo22004.1 vs. NCBI nr
Match: gi|870851259|gb|KMT03325.1| (hypothetical protein BVRB_8g198610 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 225.3 bits (573), Expect = 9.000e-56 Identity = 122/178 (68.54%), Postives = 139/178 (78.09%), Query Frame = 1
BLAST of Spo22004.1 vs. NCBI nr
Match: gi|1021477852|ref|XP_016178097.1| (PREDICTED: auxin-responsive protein IAA33 [Arachis ipaensis]) HSP 1 Score: 135.6 bits (340), Expect = 9.400e-29 Identity = 81/152 (53.29%), Postives = 101/152 (66.45%), Query Frame = 1
BLAST of Spo22004.1 vs. NCBI nr
Match: gi|641827310|gb|KDO46496.1| (hypothetical protein CISIN_1g046002mg, partial [Citrus sinensis]) HSP 1 Score: 132.5 bits (332), Expect = 8.000e-28 Identity = 85/169 (50.30%), Postives = 99/169 (58.58%), Query Frame = 1
BLAST of Spo22004.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RP53_SPIOL (Auxin-responsive protein OS=Spinacia oleracea GN=SOVF_044910 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 1.900e-89 Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 1
BLAST of Spo22004.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPI3_BETVU (Auxin-responsive protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g198610 PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 6.300e-56 Identity = 122/178 (68.54%), Postives = 139/178 (78.09%), Query Frame = 1
BLAST of Spo22004.1 vs. UniProtKB/TrEMBL
Match: A0A067E6F4_CITSI (Auxin-responsive protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046002mg PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.500e-28 Identity = 85/169 (50.30%), Postives = 99/169 (58.58%), Query Frame = 1
BLAST of Spo22004.1 vs. UniProtKB/TrEMBL
Match: D7MNA0_ARALL (Auxin-responsive protein OS=Arabidopsis lyrata subsp. lyrata GN=IAA33 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.600e-27 Identity = 82/164 (50.00%), Postives = 98/164 (59.76%), Query Frame = 1
BLAST of Spo22004.1 vs. UniProtKB/TrEMBL
Match: C0SVU3_ARATH (Auxin-responsive protein (Fragment) OS=Arabidopsis thaliana GN=IAA33 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.800e-27 Identity = 82/164 (50.00%), Postives = 97/164 (59.15%), Query Frame = 1
BLAST of Spo22004.1 vs. ExPASy Swiss-Prot
Match: IAA33_ARATH (Auxin-responsive protein IAA33 OS=Arabidopsis thaliana GN=IAA33 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.500e-29 Identity = 82/164 (50.00%), Postives = 97/164 (59.15%), Query Frame = 1
BLAST of Spo22004.1 vs. ExPASy Swiss-Prot
Match: IAA22_ORYSJ (Auxin-responsive protein IAA22 OS=Oryza sativa subsp. japonica GN=IAA22 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.800e-6 Identity = 35/107 (32.71%), Postives = 54/107 (50.47%), Query Frame = 1
BLAST of Spo22004.1 vs. TAIR (Arabidopsis)
Match: AT5G57420.1 (indole-3-acetic acid inducible 33) HSP 1 Score: 130.2 bits (326), Expect = 1.400e-30 Identity = 82/164 (50.00%), Postives = 97/164 (59.15%), Query Frame = 1
BLAST of Spo22004.1 vs. TAIR (Arabidopsis)
Match: AT4G28640.2 (indole-3-acetic acid inducible 11) HSP 1 Score: 51.2 bits (121), Expect = 8.200e-7 Identity = 28/83 (33.73%), Postives = 44/83 (53.01%), Query Frame = 1
BLAST of Spo22004.1 vs. TAIR (Arabidopsis)
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein) HSP 1 Score: 48.5 bits (114), Expect = 5.300e-6 Identity = 24/79 (30.38%), Postives = 42/79 (53.16%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22004.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22004.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22004.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo22004.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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