Spo21984 (gene)

Overview
NameSpo21984
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionLectin
LocationSpoScf_00297 : 222940 .. 224258 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAACAAGTCGCCCAGGTTCCAACTTATTTATTTTACGCGCTATTATTTCTCTTTTTTAATGCATATATACTACGTACAATTTAATTTCATTCATCCACTCTTAATAGTACGTCTAATTACATGCATAAAGTTATTAACGTTGCTTTTATCTCGACTCGTAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAGGAAGTCATCGTAAGATATGGCTACATTGTCGATGCTATTGGCTTCGTCGTTGCTAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGTCGTGCCAAGGAGTCAAGGGTAATTTTAATGACTAATTAAGCACCTATCATTTTGTATTACTAGATTAGATCTTGTGCAAGCACGGATATTATAAAAGTTATAATTTGACCATTTTTTTATAAAATATTTGAGTAATAAAAAATTATTCTAAAATAAAGTAGAATGCATCACAAAATATTTTGACAGATTCTCAATAGATTAATACGGAGTAATGTTTAGTCAAATATATTGAATCTTTCATATAAAAAATTATTGAAACAAATAAATGAATAAAAAAAAGTTTTGGCGGAAAATGACACGGGTCATTCCTGGTGTCCGTTTTAGTATAATTTAATAGATATATAGATGTTATACTCCCTCCATTTTTATTTACTTGCATCACTTACCTAAAATGGGTGTTTTTATTTACTTGCATCACTTCTTCTTTTGGAAGGCTTTTGCATTATTTTATAATTTCTCTCCCATTCTTTGGTCCTTACTTATTAATTATTTACATTTTCTTCAAATATATTTTGCATCATTTACCTAAAATGGGTGTTTACTAAACCCACTTGTAGTTTTTTTTCAATATACGATTCTCACTTATATAATTTAATATCATTTAAACTGTGTGTCCTTGCAAGTGAATAAAAAGGGAGGGAGTACTTGCATTTTGGTCCTATAACATTTTTCCTTTTCTATGCATTTATATAGATTGTACTCAAGTGTGGTGAAAAGATTACCAAGATTTCTGGCGTCTACGGAAATTACAAGTACCAGGACAATCAGTGCACTATTGCCTCAATTAAGTTCCACACCAACTTATGCCCACCTGGATATGGACCATATGGACAAGTAGACGGAGTCGAATGCCCACGTACTTTCACATCACCATGCTCACTTGATGGCCCTATTGTTGGAGTGTTTGGAAGGCACAACAACTACCTTGAGTCTGTTGGAATTTTCGTCCAGAAGAAGGTATAA

mRNA sequence

ATGGCTCAACAAGTCGCCCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAGGAAGTCATCGTAAGATATGGCTACATTGTCGATGCTATTGGCTTCGTCGTTGCTAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGTCGTGCCAAGGAGTCAAGGATTGTACTCAAGTGTGGTGAAAAGATTACCAAGATTTCTGGCGTCTACGGAAATTACAAGTACCAGGACAATCAGTGCACTATTGCCTCAATTAAGTTCCACACCAACTTATGCCCACCTGGATATGGACCATATGGACAAGTAGACGGAGTCGAATGCCCACGTACTTTCACATCACCATGCTCACTTGATGGCCCTATTGTTGGAGTGTTTGGAAGGCACAACAACTACCTTGAGTCTGTTGGAATTTTCGTCCAGAAGAAGGTATAA

Coding sequence (CDS)

ATGGCTCAACAAGTCGCCCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAGGAAGTCATCGTAAGATATGGCTACATTGTCGATGCTATTGGCTTCGTCGTTGCTAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGTCGTGCCAAGGAGTCAAGGATTGTACTCAAGTGTGGTGAAAAGATTACCAAGATTTCTGGCGTCTACGGAAATTACAAGTACCAGGACAATCAGTGCACTATTGCCTCAATTAAGTTCCACACCAACTTATGCCCACCTGGATATGGACCATATGGACAAGTAGACGGAGTCGAATGCCCACGTACTTTCACATCACCATGCTCACTTGATGGCCCTATTGTTGGAGTGTTTGGAAGGCACAACAACTACCTTGAGTCTGTTGGAATTTTCGTCCAGAAGAAGGTATAA

Protein sequence

MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGPYGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKKV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21984.1Spo21984.1mRNA


Homology
[Close]
BLAST of Spo21984.1 vs. NCBI nr
Match: gi|902239191|gb|KNA25492.1| (hypothetical protein SOVF_006290 [Spinacia oleracea])

HSP 1 Score: 354.8 bits (909), Expect = 8.400e-95
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. NCBI nr
Match: gi|902239194|gb|KNA25495.1| (hypothetical protein SOVF_006320 [Spinacia oleracea])

HSP 1 Score: 327.0 bits (837), Expect = 1.900e-86
Identity = 147/164 (89.63%), Postives = 156/164 (95.12%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGGNDCRAKESRI LKCGEKIT+ISG YGNYKYQ+NQCTIA++K HTNLCP GYGP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQ +GV+CPR F SPC +DGP+VGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. NCBI nr
Match: gi|902223762|gb|KNA19569.1| (hypothetical protein SOVF_060350 isoform B [Spinacia oleracea])

HSP 1 Score: 326.2 bits (835), Expect = 3.200e-86
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKIT+ISG YGNYKYQ+NQCTIA++K HTNLCP GYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQ +GV+CPR F SPC +DGP+VGVFGRHNNYLES+GIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. NCBI nr
Match: gi|902170609|gb|KNA07866.1| (hypothetical protein SOVF_167930 isoform A [Spinacia oleracea])

HSP 1 Score: 322.8 bits (826), Expect = 3.500e-85
Identity = 145/164 (88.41%), Postives = 155/164 (94.51%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVI+R+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKIT+ISG YGNYKYQ+NQCTIA++K HTNLCP G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQ  GV+CPR F SPC +DGP+VGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. NCBI nr
Match: gi|902146535|gb|KNA05074.1| (hypothetical protein SOVF_193740 [Spinacia oleracea])

HSP 1 Score: 316.6 bits (810), Expect = 2.500e-83
Identity = 143/164 (87.20%), Postives = 152/164 (92.68%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIVR+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGG  C AKESRI LKCGEKIT+ISG YGNYKYQ+NQCTIA++K HTNLCP GYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQ  GV+CPR F SPC +DGP+VGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2X5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006290 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 5.800e-95
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S169_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006320 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.300e-86
Identity = 147/164 (89.63%), Postives = 156/164 (95.12%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGGNDCRAKESRI LKCGEKIT+ISG YGNYKYQ+NQCTIA++K HTNLCP GYGP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQ +GV+CPR F SPC +DGP+VGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKW0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060350 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.200e-86
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKIT+ISG YGNYKYQ+NQCTIA++K HTNLCP GYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQ +GV+CPR F SPC +DGP+VGVFGRHNNYLES+GIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMR1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_167930 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.500e-85
Identity = 145/164 (88.41%), Postives = 155/164 (94.51%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVI+R+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKIT+ISG YGNYKYQ+NQCTIA++K HTNLCP G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQ  GV+CPR F SPC +DGP+VGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCS4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193740 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.800e-83
Identity = 143/164 (87.20%), Postives = 152/164 (92.68%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIVR+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGP 120
           YTKMFGG  C AKESRI LKCGEKIT+ISG YGNYKYQ+NQCTIA++K HTNLCP GYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQVDGVECPRTFTSPCSLDGPIVGVFGRHNNYLESVGIFVQKK 165
           YGQ  GV+CPR F SPC +DGP+VGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21984.1 vs. ExPASy Swiss-Prot
Match: LEC_PARPC (Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.500e-14
Identity = 50/151 (33.11%), Postives = 78/151 (51.66%), Query Frame = 1 

		  

Query: 15  GPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGG---NDCR 74
           GP+G    + +S+   EG  I ++I+  G  + ++ F   K   G  +  FGG    D  
Sbjct: 304 GPWGGSGGDPWSYTANEG--INQIIIYAGSNIKSVAF---KDTSGLDSATFGGVNPKDTG 363

Query: 75  AKESRIVLKCGEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGPYGQVDGVECPR 134
            K +  +    E +T ISG YG YK++D   TI S+ F TNL    YGP+G+        
Sbjct: 364 EKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNLAT--YGPFGKASAT---- 423

Query: 135 TFTSPCSLDGPIVGVFGRHNNYLESVGIFVQ 163
           +F+ P   +  +VG  GR  +YL+++GIFV+
Sbjct: 424 SFSIPIH-NNMVVGFHGRAGDYLDAIGIFVK 442
[Close]
BLAST of Spo21984.1 vs. ExPASy Swiss-Prot
Match: JAL3_ARATH (Jacalin-related lectin 3 OS=Arabidopsis thaliana GN=JAL3 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.100e-6
Identity = 40/150 (26.67%), Postives = 69/150 (46.00%), Query Frame = 1 

		  

Query: 15  GPYGSQCPENYSFKLQEGESIKEVIVRYGY-IVDAIGFVVAKPCGGTYTKMFGGNDCRAK 74
           GP+G    + +   +  G  IK++ V  G   + +I     +     ++   GG+     
Sbjct: 442 GPWGGDGGQAWDDGVFSG--IKQIFVTRGNDAITSIQIEYDRNGQSVWSIKHGGDSNGVA 501

Query: 75  ESRIVLKC-GEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGPYGQVDGVECPRT 134
             RI  +   E IT ISG YG     D    + S+ F+T+     YGPYG+  G     T
Sbjct: 502 THRIKFEYPDESITCISGYYGPLNNSDRYNVVKSLSFYTSR--GRYGPYGEETG-----T 561

Query: 135 FTSPCSLDGPIVGVFGRHNNYLESVGIFVQ 163
           F +  +  G ++G  GR + +L+++G+ +Q
Sbjct: 562 FFTSTTTQGKVLGFHGRSSFHLDAIGVHMQ 582
[Close]
BLAST of Spo21984.1 vs. TAIR (Arabidopsis)
Match: AT1G19715.3 (Mannose-binding lectin superfamily protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.300e-8
Identity = 40/150 (26.67%), Postives = 69/150 (46.00%), Query Frame = 1 

		  

Query: 15  GPYGSQCPENYSFKLQEGESIKEVIVRYGY-IVDAIGFVVAKPCGGTYTKMFGGNDCRAK 74
           GP+G    + +   +  G  IK++ V  G   + +I     +     ++   GG+     
Sbjct: 442 GPWGGDGGQAWDDGVFSG--IKQIFVTRGNDAITSIQIEYDRNGQSVWSIKHGGDSNGVA 501

Query: 75  ESRIVLKC-GEKITKISGVYGNYKYQDNQCTIASIKFHTNLCPPGYGPYGQVDGVECPRT 134
             RI  +   E IT ISG YG     D    + S+ F+T+     YGPYG+  G     T
Sbjct: 502 THRIKFEYPDESITCISGYYGPLNNSDRYNVVKSLSFYTSR--GRYGPYGEETG-----T 561

Query: 135 FTSPCSLDGPIVGVFGRHNNYLESVGIFVQ 163
           F +  +  G ++G  GR + +L+++G+ +Q
Sbjct: 562 FFTSTTTQGKVLGFHGRSSFHLDAIGVHMQ 582
The following BLAST results are available for this feature:
BLAST of Spo21984.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902239191|gb|KNA25492.1|8.4e-95100.hypothetical protein SOVF_0062... [more]
gi|902239194|gb|KNA25495.1|1.9e-8689.6hypothetical protein SOVF_0063... [more]
gi|902223762|gb|KNA19569.1|3.2e-8689.0hypothetical protein SOVF_0603... [more]
gi|902170609|gb|KNA07866.1|3.5e-8588.4hypothetical protein SOVF_1679... [more]
gi|902146535|gb|KNA05074.1|2.5e-8387.2hypothetical protein SOVF_1937... [more]
back to top
BLAST of Spo21984.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2X5_SPIOL5.8e-95100.Uncharacterized protein OS=Spi... [more]
A0A0K9S169_SPIOL1.3e-8689.6Uncharacterized protein OS=Spi... [more]
A0A0K9RKW0_SPIOL2.2e-8689.0Uncharacterized protein OS=Spi... [more]
A0A0K9QMR1_SPIOL2.5e-8588.4Uncharacterized protein OS=Spi... [more]
A0A0K9QCS4_SPIOL1.8e-8387.2Uncharacterized protein OS=Spi... [more]
back to top
BLAST of Spo21984.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LEC_PARPC2.5e-1433.1Mannose/glucose-specific lecti... [more]
JAL3_ARATH1.1e-626.6Jacalin-related lectin 3 OS=Ar... [more]
back to top
BLAST of Spo21984.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G19715.36.3e-826.6Mannose-binding lectin superfa... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001229Jacalin-like lectin domainGENE3D2.100.10.30coord: 10..162
score: 1.8
IPR001229Jacalin-like lectin domainPFAMPF01419Jacalincoord: 69..161
score: 5.
IPR001229Jacalin-like lectin domainPROFILEPS51752JACALIN_LECTINcoord: 11..163
score: 13
IPR001229Jacalin-like lectin domainunknownSSF51101Mannose-binding lectinscoord: 9..161
score: 3.79

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045901 positive regulation of translational elongation
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0045905 positive regulation of translational termination
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006452 translational frameshifting
cellular_component GO:0005840 ribosome
cellular_component GO:0000785 chromatin
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003743 translation initiation factor activity
RNA-Seq Expression