Spo21969 (gene)

Overview
NameSpo21969
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionLectin
LocationSpoScf_00297 : 342273 .. 342981 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAACAAGTCGCCCAGGTTTGAACTTATATATTTTACGCGCTATTATTTTTCTTTCGTAATGCATATTCAATTCGTTCATCCAATCCTAATAGTCTAATTATATGCATAATGTTGCTTTTGTCTTGACTCGCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGCCCCGAAAATTACAGCTTTAAACTTCAAGAAGGTGAAACTATCAAGGAAGTCATCGTAAGGCATGGCTTCATTGTTGACGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCATCAGTTGTCATGCCAAGGAGTCAAGGGTTAGTGTTATATATGACTGAGCACCTATAAATTTTCATACGTGATACTTCTTGTTTAGATTTTTGTCCTCTAACGTTTTTCCCTTTATATAGATTGCACTCAAATGTGGTGAAAAGATAACCCAGATTTCTGGCACATACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACGTTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAAGGGAGTCGATTGTCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGTCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTGTTGGGATTTTCGTCCAGAAGAAGGTATAA

mRNA sequence

ATGGCTCAACAAGTCGCCCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGCCCCGAAAATTACAGCTTTAAACTTCAAGAAGGTGAAACTATCAAGGAAGTCATCGTAAGGCATGGCTTCATTGTTGACGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCATCAGTTGTCATGCCAAGGAGTCAAGGATTGCACTCAAATGTGGTGAAAAGATAACCCAGATTTCTGGCACATACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACGTTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAAGGGAGTCGATTGTCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGTCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTGTTGGGATTTTCGTCCAGAAGAAGGTATAA

Coding sequence (CDS)

ATGGCTCAACAAGTCGCCCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGCCCCGAAAATTACAGCTTTAAACTTCAAGAAGGTGAAACTATCAAGGAAGTCATCGTAAGGCATGGCTTCATTGTTGACGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCATCAGTTGTCATGCCAAGGAGTCAAGGATTGCACTCAAATGTGGTGAAAAGATAACCCAGATTTCTGGCACATACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACGTTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAAGGGAGTCGATTGTCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGTCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTGTTGGGATTTTCGTCCAGAAGAAGGTATAA

Protein sequence

MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGTYTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21969.1Spo21969.1mRNA


Homology
[Close]
BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902181285|gb|KNA09703.1| (hypothetical protein SOVF_151170 [Spinacia oleracea])

HSP 1 Score: 354.0 bits (907), Expect = 1.400e-94
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902146535|gb|KNA05074.1| (hypothetical protein SOVF_193740 [Spinacia oleracea])

HSP 1 Score: 351.3 bits (900), Expect = 9.300e-94
Identity = 162/164 (98.78%), Postives = 164/164 (100.00%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+GYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902174416|gb|KNA08411.1| (hypothetical protein SOVF_162610 [Spinacia oleracea])

HSP 1 Score: 342.8 bits (878), Expect = 3.300e-91
Identity = 157/164 (95.73%), Postives = 161/164 (98.17%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+RHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           Y KMFGG SCHAKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902239194|gb|KNA25495.1| (hypothetical protein SOVF_006320 [Spinacia oleracea])

HSP 1 Score: 341.3 bits (874), Expect = 9.600e-91
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVR+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902223762|gb|KNA19569.1| (hypothetical protein SOVF_060350 isoform B [Spinacia oleracea])

HSP 1 Score: 337.4 bits (864), Expect = 1.400e-89
Identity = 155/164 (94.51%), Postives = 158/164 (96.34%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVR+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSP7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151170 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.000e-94
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCS4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193740 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 6.500e-94
Identity = 162/164 (98.78%), Postives = 164/164 (100.00%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+GYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPB9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_162610 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.300e-91
Identity = 157/164 (95.73%), Postives = 161/164 (98.17%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+RHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           Y KMFGG SCHAKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S169_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006320 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 6.700e-91
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVR+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKW0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060350 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 9.700e-90
Identity = 155/164 (94.51%), Postives = 158/164 (96.34%), Query Frame = 1 

		  

Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVR+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKK 164
[Close]
BLAST of Spo21969.1 vs. ExPASy Swiss-Prot
Match: LEC_PARPC (Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.200e-13
Identity = 48/151 (31.79%), Postives = 82/151 (54.30%), Query Frame = 1 

		  

Query: 15  GPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGTYTKMFGGISCH--A 74
           GP+G    + +S+   EG  I ++I+  G  + ++ F   K   G  +  FGG++     
Sbjct: 304 GPWGGSGGDPWSYTANEG--INQIIIYAGSNIKSVAF---KDTSGLDSATFGGVNPKDTG 363

Query: 75  KESRIALKC-GEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGKGVDCPR 134
           +++ +++    E +T ISGTYG YK+++   TI +L   TNL    YGP+G+        
Sbjct: 364 EKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNLAT--YGPFGKASAT---- 423

Query: 135 AFASPCPIDGPVVGVFGRHNNYLESVGIFVQ 163
           +F+ P   +  VVG  GR  +YL+++GIFV+
Sbjct: 424 SFSIPIH-NNMVVGFHGRAGDYLDAIGIFVK 442
The following BLAST results are available for this feature:
BLAST of Spo21969.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902181285|gb|KNA09703.1|1.4e-94100.hypothetical protein SOVF_1511... [more]
gi|902146535|gb|KNA05074.1|9.3e-9498.7hypothetical protein SOVF_1937... [more]
gi|902174416|gb|KNA08411.1|3.3e-9195.7hypothetical protein SOVF_1626... [more]
gi|902239194|gb|KNA25495.1|9.6e-9196.3hypothetical protein SOVF_0063... [more]
gi|902223762|gb|KNA19569.1|1.4e-8994.5hypothetical protein SOVF_0603... [more]
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BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSP7_SPIOL1.0e-94100.Uncharacterized protein OS=Spi... [more]
A0A0K9QCS4_SPIOL6.5e-9498.7Uncharacterized protein OS=Spi... [more]
A0A0K9QPB9_SPIOL2.3e-9195.7Uncharacterized protein OS=Spi... [more]
A0A0K9S169_SPIOL6.7e-9196.3Uncharacterized protein OS=Spi... [more]
A0A0K9RKW0_SPIOL9.7e-9094.5Uncharacterized protein OS=Spi... [more]
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BLAST of Spo21969.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEC_PARPC6.2e-1331.7Mannose/glucose-specific lecti... [more]
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BLAST of Spo21969.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001229Jacalin-like lectin domainGENE3D2.100.10.30coord: 10..162
score: 1.6
IPR001229Jacalin-like lectin domainPFAMPF01419Jacalincoord: 36..161
score: 1.
IPR001229Jacalin-like lectin domainPROFILEPS51752JACALIN_LECTINcoord: 11..163
score: 12
IPR001229Jacalin-like lectin domainunknownSSF51101Mannose-binding lectinscoord: 9..161
score: 6.54

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0030001 metal ion transport
biological_process GO:0042545 cell wall modification
biological_process GO:0009651 response to salt stress
biological_process GO:0006457 protein folding
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0006464 cellular protein modification process
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0009736 cytokinin-activated signaling pathway
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0006554 lysine catabolic process
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0048825 cotyledon development
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0016567 protein ubiquitination
biological_process GO:0035725 sodium ion transmembrane transport
biological_process GO:0006885 regulation of pH
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0055075 potassium ion homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006452 translational frameshifting
biological_process GO:0045905 positive regulation of translational termination
biological_process GO:0045901 positive regulation of translational elongation
biological_process GO:0006396 RNA processing
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0016246 RNA interference
biological_process GO:0009611 response to wounding
biological_process GO:0009744 response to sucrose
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0048571 long-day photoperiodism
biological_process GO:0016070 RNA metabolic process
biological_process GO:0010104 regulation of ethylene-activated signaling pathway
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0006869 lipid transport
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043269 regulation of ion transport
biological_process GO:0008152 metabolic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006606 protein import into nucleus
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006862 nucleotide transport
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0061025 membrane fusion
biological_process GO:0010351 lithium ion transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0015802 basic amino acid transport
biological_process GO:0043090 amino acid import
biological_process GO:0044248 cellular catabolic process
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0015696 ammonium transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009987 cellular process
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000932 P-body
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0000786 nucleosome
cellular_component GO:0045252 oxoglutarate dehydrogenase complex
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0000785 chromatin
cellular_component GO:0005840 ribosome
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0030976 thiamine pyrophosphate binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0050661 NADP binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0043022 ribosome binding
molecular_function GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0008536 Ran GTPase binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003712 transcription coregulator activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008641 ubiquitin-like modifier activating enzyme activity
molecular_function GO:0015385 sodium:proton antiporter activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo219730.89Barchart | Table
Spo219850.88Barchart | Table
Spo219680.86Barchart | Table
Spo219820.82Barchart | Table
Spo219840.81Barchart | Table
Spo210820.80Barchart | Table
Spo068730.75Barchart | Table
Spo159940.74Barchart | Table
Spo221390.73Barchart | Table
Spo097110.73Barchart | Table
Spo210770.72Barchart | Table
Spo248390.72Barchart | Table
Spo044090.72Barchart | Table
Spo021050.71Barchart | Table
Spo262720.71Barchart | Table
Spo247750.71Barchart | Table
Spo240010.71Barchart | Table
Spo163780.70Barchart | Table
Spo151600.70Barchart | Table
Spo234960.70Barchart | Table
Spo147030.70Barchart | Table
Spo083800.70Barchart | Table
Spo011280.70Barchart | Table
Spo193940.70Barchart | Table
Spo225050.69Barchart | Table
Spo024700.69Barchart | Table
Spo029910.69Barchart | Table
Spo048930.69Barchart | Table
Spo050900.69Barchart | Table
Spo120840.69Barchart | Table
Spo203860.69Barchart | Table
Spo261080.69Barchart | Table
Spo098550.68Barchart | Table
Spo236220.68Barchart | Table
Spo041140.68Barchart | Table
Spo129180.68Barchart | Table
Spo253060.68Barchart | Table
Spo058830.68Barchart | Table
Spo196640.68Barchart | Table
Spo239660.68Barchart | Table
Spo112260.68Barchart | Table
Spo038780.67Barchart | Table
Spo214060.67Barchart | Table
Spo249360.67Barchart | Table
Spo142670.67Barchart | Table
Spo253460.67Barchart | Table
Spo198730.66Barchart | Table
Spo214100.66Barchart | Table
Spo122240.66Barchart | Table
Spo096720.66Barchart | Table
Spo068400.66Barchart | Table
Spo063170.66Barchart | Table
Spo251000.66Barchart | Table
Spo269100.66Barchart | Table
Spo182210.66Barchart | Table
Spo004440.65Barchart | Table
Spo074480.65Barchart | Table
Spo243990.65Barchart | Table
Spo063410.65Barchart | Table
Spo201540.65Barchart | Table