Spo21956 (gene)

Overview
NameSpo21956
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTMPIT-like protein
LocationSpoScf_01385 : 37708 .. 40811 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGCATGGATAGGGGAGGATTTTGCCTACATCACAAGAAAAAGAGGTCAAGGAATTCCAGATATGGAAGAGGAGCGGAAAATCCGGAGAGAGCTTCAACTTCCAGAGTTCAATGGAGTTAATCCCGAGGGTTGGATTCTGGAATTGGAGGATACATTCCATTTTTTCCGGCTTAATGAGGAGGCGAAGTTAAAGGCTGCCATTATAACACTTGACGGAGACGCGCTACAGTGGTTCCAATGGGAACATCAGCGGTGGCCGTTTAATGACTGGCATGAATTGAAGAGCCAGGTGGTGCGACGCTTTGGTTTTTCACGACAAACTCCGAAAAAGCTCAACGGCAAGGCAGAACACCAGAATTTCTCCTCGAGTCAAGTCTGTGGTGGACTGCCAATGTTTATAGAAGCTATGGTCGGCAGTCAAGGCAATTATCATTCACCGTCTGAGAACCATAAAAAGGAGGCCAAGCCAATAGATCTGATGGAGGAAGAAAGAGAGGTGGTGAGTATGAGTGAGGTTCATTTAACAACCACTGACTTTCAAACTTCATGTGAGAAAGAGTCCGGTAGCCTACTTACAATGGAGTCTTTGGCTATACCTGGTAGTACGTTACCGGCGAAGGCGACGCTAGTAACATCAGATTTGGAGGAAATAAGGTATGGAGGAAATAAGGTATGGAGGAACAGGTGGAGGGAACTTTTTTGGTGGGTTTAATGGTGGAGGTCGAGTTGGGTGCGAATTTGTTGGTAGTCTGGCGGAGGAAGTGGTGGGAGGACATGTTGATGGACGGAAAAACATTCTCATCGGCAACGACCATAGTGATGGAGGAATATTCGAGAAAGGAGGAGCCGGAGGTAGTGGTTCCGGCGGTGGTCCTGGCCTTTTGGCCGGCAATTGTAAGATTGGTGGTCGAATTCCAACCTACGGTGGACTGATTAGGGAAGATTATGGATTCTTCAAAGGTGGATCTGAAGCTAGTGGCTCCTTTGGAGATCTGGGTTTCGCCGGCAGAGTTGTGGGTGGTGATTATGGTGTTTTAACCGGCGGAGAAGAGGAGTTTGTCGAGGGTCACACCGATTCGAGTGCAACTGGTGATGGCCCGAGCAACGACGTACCAGTAGGTGGTGCTGTGCACCAGCAGCTTCAAGAAATCTTTCAAAAGATTCCAGAAATGGAGATTAGAAAAAAAGCGTATGGGAGAAGATATGCCGAGTCATTGAACAGCTTGAGGAGGAAGCTAAATGTAGCTGATGCAATTAGTAAGGGCAATGTTGTAATTACTCAAGAAAGGCACTGCCAGGCCCAAATTTCTGATCCACTTTCTCTCCTCTACATCTACCTAATCAACCCAACCCAGTTCTAGAGGTCAACACTCCTTCTAACTTCAAGTTTAGACCAACTAGTATAGGACACGTTTCTGGGCCATCAGACTTAAATCTATCTCAGCCCAATCATCTTTAAACCCATTCTTTTTCCCAACTTTTCCAGCCCACAAACTCCCAATTTTCTGATTTTTTCTTCCACATCTAAATTCACTTCTTTAGTACAAGTTTCTACACCCAAACCATTCAGCCCTTCTCTTTTTAATTCCCTCAACCCACAGCCTTTCCATCTCACTTCAGAAAATTCCAACTTCAACCAATTTTTACTTCCACCCTATGACAACTCCAAGGCTAACTTTTTCTTAGCTACACCACCAAAGGAAGTACAAGTACTCACCAATGAGGAGCTTGAACGCCAGTGGAAGCCGGGCATCAATTCTCACACGGACATTGCTAATTGTTGCCAAGGCCGGGAATTTTGTGCTGATTACTATCCACCTTGAGGACAAGGTGGAAGTTTGGGGGGCCGGTAATGCAATGAACTGATATTATGGAGGGGTACTTTAGGAAATAGCTATTTAAGTTAGTACAAGCAGATTGGGGAACAAGTTAGGGGTTAGTCAGGGAGGTAGTACTATATATATAGGCAGCTGTAGAGAAGGAATGTTATGTTGAATATTGTTGAGGAATTTGGTTGAGCTTTTAAGAGCTCATTGGGAGAGAAATCAAGCCTCTCGAATGCTTGAATATCAGTTACTTGTGTTTTCAGTTTATTAATCAAATTTTCATTAGTTTCTTGATTTATGGTCTGTTATCTATGCTAATTCATAGCAGGTAAGCAGTAAAATTCTCTTTTTTTTGTGCCAATAGGATCCGTTATATCCTAAATGCAATGATCAAACTTGGTTGAAAGACTATGCTTATTGAACTCATGTACTCTGCAAAAATTTCCAGGGTTTCGAGGCTTATGTTGGACTGTTGTTGCTTCAAACAGCATTTGTTGGAGTTGTATCCGAATGGCAGGTGAGCTACCTTGTCTCTCTGCGTATTTTACAGAGACGGATAATAGGGTTGCATTAAGCATCTTCTTAATACTCATGCTTCATATTTTGACGCCATTATGAAATAGTGACAACTGACAAGTACCTTTGACAGGTCGTTTTTTGTGGATTTCTTCTGGTTTTAATGGCAATTGGGAATTTCGCAAATACGGTGCAGACTTTACTCGTCAAATCACGGTTTAAGGCAAAGATGAAAAGGACTAAAAGTAAGCAGCAGTTAGATTAGAGAAGGCTTTTCCAAAAGTTCAGTAGTCTCATACTCCCTTTACTTCTTAATTATATCCTTGGTCTGTTAGCTTTGTGTTTCTCAAGATTCTTTTTAATGGAGTTTAGAATTGTACACATTGTTTTATAGCAGATTTTACACCCCCTCCGCCCGAAAAAAATAAGAAAAACAGAGGTAATTATGTAAAAGTTTTCTGTCTTTACCACAAGTTCGAATATTTGTATTGTTTAGCAGATTGCCTGAATTGGTCTGTATTTGTCAATAATAAGATGGGATGATCCCCTATATTCAATTTTGATTGATCCACTCTCTATTTCTTCCTAATCTTTCTCAAAATTGATCATTGAAATCCCGAAAATGCTCTCACTATGTTCGTGGTTCTTGTAAAATTCTCAGCATGAATTCATGAAACACCTTTAAACAATCTGAAGATGCAAACAAGTTGATGTACTGAGGGCTTGAGCAGAGCCCGAGGGTTTGACTCTTGTACCG

mRNA sequence

ATGCACGCATGGATAGGGGAGGATTTTGCCTACATCACAAGAAAAAGAGGTCAAGGAATTCCAGATATGGAAGAGGAGCGGAAAATCCGGAGAGAGCTTCAACTTCCAGAGTTCAATGGAGTTAATCCCGAGGGTTGGATTCTGGAATTGGAGGATACATTCCATTTTTTCCGGCTTAATGAGGAGGCGAAGTTAAAGGCTGCCATTATAACACTTGACGGAGACGCGCTACAGTGGTTCCAATGGGAACATCAGCGGTGGCCGTTTAATGACTGGCATGAATTGAAGAGCCAGGTGGTGCGACGCTTTGGTTTTTCACGACAAACTCCGAAAAAGCTCAACGGCAAGGCAGAACACCAGAATTTCTCCTCGAGTCAAGTCTGTGGTGGACTGCCAATGTTTATAGAAGCTATGGTCGGCAGTCAAGGCAATTATCATTCACCGTCTGAGAACCATAAAAAGGAGGCCAAGCCAATAGATCTGATGGAGGAAGAAAGAGAGGTGGTGAGTATGAGTGAGGTTCATTTAACAACCACTGACTTTCAAACTTCATGTGAGAAAGAGTCCGGTAGCCTACTTACAATGGAGTCTTTGGCTATACCTGGTAGTACGTTACCGGCGAAGGCGACGCTAGTAACATCAGATTTGGAGGAAATAAGTCTGGCGGAGGAAGTGGTGGGAGGACATGTTGATGGACGGAAAAACATTCTCATCGGCAACGACCATAGTGATGGAGGAATATTCGAGAAAGGAGGAGCCGGAGGTAGTGGTTCCGGCGGTGGTCCTGGCCTTTTGGCCGGCAATTGTAAGATTGGTGGTCGAATTCCAACCTACGGTGGACTGATTAGGGAAGATTATGGATTCTTCAAAGGTGGATCTGAAGCTAGTGGCTCCTTTGGAGATCTGGGTTTCGCCGGCAGAGTTGTGGGTGGTGATTATGGTGTTTTAACCGGCGGAGAAGAGGAGTTTGTCGAGGGTCACACCGATTCGAGTGCAACTGGTGATGGCCCGAGCAACGACGTACCAGTAGGTGGTGCTGTGCACCAGCAGCTTCAAGAAATCTTTCAAAAGATTCCAGAAATGGAGATTAGAAAAAAAGCGTATGGGAGAAGATATGCCGAGTCATTGAACAGCTTGAGGAGGAAGCTAAATGTAGCTGATGCAATTAGTAAGGGCAATGTTGGTTTCGAGGCTTATGTTGGACTGTTGTTGCTTCAAACAGCATTTGTTGGAGTTGTATCCGAATGGCAGGTCGTTTTTTGTGGATTTCTTCTGGTTTTAATGGCAATTGGGAATTTCGCAAATACGGTGCAGACTTTACTCGTCAAATCACGGTTTAAGGCAAAGATGAAAAGGACTAAAAGTAAGCAGCAGTTAGATTAGAGAAGGCTTTTCCAAAAGTTCAGTAGTCTCATACTCCCTTTACTTCTTAATTATATCCTTGGTCTGTTAGCTTTGTGTTTCTCAAGATTCTTTTTAATGGAGTTTAGAATTGTACACATTGTTTTATAGCAGATTTTACACCCCCTCCGCCCGAAAAAAATAAGAAAAACAGAGGTAATTATGTAAAAGTTTTCTGTCTTTACCACAAGTTCGAATATTTGTATTGTTTAGCAGATTGCCTGAATTGGTCTGTATTTGTCAATAATAAGATGGGATGATCCCCTATATTCAATTTTGATTGATCCACTCTCTATTTCTTCCTAATCTTTCTCAAAATTGATCATTGAAATCCCGAAAATGCTCTCACTATGTTCGTGGTTCTTGTAAAATTCTCAGCATGAATTCATGAAACACCTTTAAACAATCTGAAGATGCAAACAAGTTGATGTACTGAGGGCTTGAGCAGAGCCCGAGGGTTTGACTCTTGTACCG

Coding sequence (CDS)

ATGCACGCATGGATAGGGGAGGATTTTGCCTACATCACAAGAAAAAGAGGTCAAGGAATTCCAGATATGGAAGAGGAGCGGAAAATCCGGAGAGAGCTTCAACTTCCAGAGTTCAATGGAGTTAATCCCGAGGGTTGGATTCTGGAATTGGAGGATACATTCCATTTTTTCCGGCTTAATGAGGAGGCGAAGTTAAAGGCTGCCATTATAACACTTGACGGAGACGCGCTACAGTGGTTCCAATGGGAACATCAGCGGTGGCCGTTTAATGACTGGCATGAATTGAAGAGCCAGGTGGTGCGACGCTTTGGTTTTTCACGACAAACTCCGAAAAAGCTCAACGGCAAGGCAGAACACCAGAATTTCTCCTCGAGTCAAGTCTGTGGTGGACTGCCAATGTTTATAGAAGCTATGGTCGGCAGTCAAGGCAATTATCATTCACCGTCTGAGAACCATAAAAAGGAGGCCAAGCCAATAGATCTGATGGAGGAAGAAAGAGAGGTGGTGAGTATGAGTGAGGTTCATTTAACAACCACTGACTTTCAAACTTCATGTGAGAAAGAGTCCGGTAGCCTACTTACAATGGAGTCTTTGGCTATACCTGGTAGTACGTTACCGGCGAAGGCGACGCTAGTAACATCAGATTTGGAGGAAATAAGTCTGGCGGAGGAAGTGGTGGGAGGACATGTTGATGGACGGAAAAACATTCTCATCGGCAACGACCATAGTGATGGAGGAATATTCGAGAAAGGAGGAGCCGGAGGTAGTGGTTCCGGCGGTGGTCCTGGCCTTTTGGCCGGCAATTGTAAGATTGGTGGTCGAATTCCAACCTACGGTGGACTGATTAGGGAAGATTATGGATTCTTCAAAGGTGGATCTGAAGCTAGTGGCTCCTTTGGAGATCTGGGTTTCGCCGGCAGAGTTGTGGGTGGTGATTATGGTGTTTTAACCGGCGGAGAAGAGGAGTTTGTCGAGGGTCACACCGATTCGAGTGCAACTGGTGATGGCCCGAGCAACGACGTACCAGTAGGTGGTGCTGTGCACCAGCAGCTTCAAGAAATCTTTCAAAAGATTCCAGAAATGGAGATTAGAAAAAAAGCGTATGGGAGAAGATATGCCGAGTCATTGAACAGCTTGAGGAGGAAGCTAAATGTAGCTGATGCAATTAGTAAGGGCAATGTTGGTTTCGAGGCTTATGTTGGACTGTTGTTGCTTCAAACAGCATTTGTTGGAGTTGTATCCGAATGGCAGGTCGTTTTTTGTGGATTTCTTCTGGTTTTAATGGCAATTGGGAATTTCGCAAATACGGTGCAGACTTTACTCGTCAAATCACGGTTTAAGGCAAAGATGAAAAGGACTAAAAGTAAGCAGCAGTTAGATTAG

Protein sequence

MHAWIGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLNEEAKLKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRFGFSRQTPKKLNGKAEHQNFSSSQVCGGLPMFIEAMVGSQGNYHSPSENHKKEAKPIDLMEEEREVVSMSEVHLTTTDFQTSCEKESGSLLTMESLAIPGSTLPAKATLVTSDLEEISLAEEVVGGHVDGRKNILIGNDHSDGGIFEKGGAGGSGSGGGPGLLAGNCKIGGRIPTYGGLIREDYGFFKGGSEASGSFGDLGFAGRVVGGDYGVLTGGEEEFVEGHTDSSATGDGPSNDVPVGGAVHQQLQEIFQKIPEMEIRKKAYGRRYAESLNSLRRKLNVADAISKGNVGFEAYVGLLLLQTAFVGVVSEWQVVFCGFLLVLMAIGNFANTVQTLLVKSRFKAKMKRTKSKQQLD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21956.1Spo21956.1mRNA


Homology
BLAST of Spo21956.1 vs. NCBI nr
Match: gi|731346560|ref|XP_010684517.1| (PREDICTED: uncharacterized protein LOC104899081 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 243.4 bits (620), Expect = 7.600e-61
Identity = 171/389 (43.96%), Postives = 209/389 (53.73%), Query Frame = 1

		  

Query: 5   IGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLNEEAK 64
           + E FA I        PD+ + + IR ELQLP F+G NPE WI E+E  FH F  +E+ K
Sbjct: 8   VREGFAEIMWSLNPCYPDLRKLQVIRNELQLPLFDGRNPEEWIDEMEIYFHLFWFSEKEK 67

Query: 65  LKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRFGFSRQTPKKLNGKAEHQNFSS 124
           L+A I+ L+G+AL WFQWEH R PF  W ELK+ V RRF   R T  K      HQN ++
Sbjct: 68  LEAVIVGLEGEALSWFQWEHHRRPFYRWEELKALVARRF---RTTSTKSWKGWSHQNRAA 127

Query: 125 SQVCGGLPMFIEAMVGSQGNYHSPSENHKKEAKPIDLMEEEREVVSMSEVHLTTTDFQTS 184
                        MV       + S +  +E K       E    +  +V L  +  Q +
Sbjct: 128 D------------MVEKIPEIGASSTSLLEEVKTSICGGGEEIYHNQMKVRLVVSLNQAA 187

Query: 185 CEKESGSLLTMESLAIPGSTLPAKATLVTSDLEEISLAEEVVGGHVDGRKNILIGNDHSD 244
             K   +     S +  G     K   V S       A EV GG     +   IG     
Sbjct: 188 KNKSENA-----SFSFFGGYTGGKQAGVAS-------AFEVYGGSSSFAREAAIGTS--- 247

Query: 245 GGIFEKGGAGGSGSGGGPGLLAGNCKIGGRIPTYGGLIREDYGFFKGGSEASGSFGDLGF 304
              FE+G     G  GGP  LAGNCK GG+  T GGL RE+YGFFKG SEASGS G  GF
Sbjct: 248 ---FEQG-----GDRGGPEFLAGNCKFGGKTATCGGLNREEYGFFKGRSEASGSGGGPGF 307

Query: 305 AGRVVGGDYGVLTGGEEEFVEGHTDSSATGDGPSNDVPVGGAVHQQLQEIFQKIPEMEIR 364
           AGRV GG  G  TG EEEF+     +SA G GPS    VGG VH++LQEIFQKI E+EI+
Sbjct: 308 AGRVAGGHAGGSTGEEEEFI-----TSAAGSGPSGGDMVGGVVHRELQEIFQKISEVEIQ 353

Query: 365 KKAYGRRYAESLNSLRRKLNVADAISKGN 394
           K+ YGRR+AESL SLR KLN+ DAI+KGN
Sbjct: 368 KEEYGRRFAESLISLRGKLNIDDAITKGN 353

BLAST of Spo21956.1 vs. NCBI nr
Match: gi|731318549|ref|XP_010669787.1| (PREDICTED: keratin, type I cytoskeletal 9-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 165.2 bits (417), Expect = 2.600e-37
Identity = 73/103 (70.87%), Postives = 85/103 (82.52%), Query Frame = 1

		  

Query: 1   MHAWIGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLN 60
           M  WI E+FAYI  KR +   D+EEER+IRRELQLPEFNG NPEGWILELEDTFHFF+L+
Sbjct: 12  MQMWINEEFAYIKHKRDREFSDLEEERRIRRELQLPEFNGRNPEGWILELEDTFHFFQLD 71

Query: 61  EEAKLKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRF 104
           E AKLKAAI+TL+GDA +WF+WEH+R  F DW ELK Q+VR F
Sbjct: 72  ESAKLKAAIMTLEGDAQRWFEWEHRRLSFRDWQELKEQIVRHF 114

BLAST of Spo21956.1 vs. NCBI nr
Match: gi|870860211|gb|KMT11574.1| (hypothetical protein BVRB_5g108880 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 161.8 bits (408), Expect = 2.900e-36
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 1

		  

Query: 1   MHAWIGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLN 60
           M  WI E+FAYIT KR +G  D+EEER+IRRELQLPEFNG NPEGWI+ELED FHFF+L+
Sbjct: 12  MQMWINEEFAYITHKRDRGFSDLEEERRIRRELQLPEFNGRNPEGWIMELEDIFHFFQLD 71

Query: 61  EEAKLKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRFG 105
           E AKLKAA +TL GDA +WF+WEH+R PF++W ELK+ V R FG
Sbjct: 72  ESAKLKAATMTLVGDAHRWFEWEHRRRPFHEWKELKALVWRYFG 115

BLAST of Spo21956.1 vs. NCBI nr
Match: gi|731372571|ref|XP_010666388.1| (PREDICTED: uncharacterized protein LOC104883545 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 161.0 bits (406), Expect = 5.000e-36
Identity = 130/351 (37.04%), Postives = 168/351 (47.86%), Query Frame = 1

		  

Query: 1   MHAWIGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLN 60
           MH WI E+FAYIT KR   I D EEER+IR+ELQ+ E NG N + WIL+LED F FF+LN
Sbjct: 12  MHTWIREEFAYITHKRDLEISDSEEERRIRQELQIHEINGGNSKDWILQLEDFFEFFQLN 71

Query: 61  EEAKLKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRFGFSRQTPKKLNGKAEHQ 120
           EEAKLK AII LDGDA +WF+ EH+R PF DW ELK Q++R+F  S  TP         Q
Sbjct: 72  EEAKLKVAIIGLDGDARRWFEDEHRRLPFYDWQELKGQMLRQF-CSTSTPS-------WQ 131

Query: 121 NFSSSQVCGGLPMFIEAMVG----SQGNYHSP----SENHK----KEAKPIDLMEEEREV 180
             S S  C      + + +G      G    P    SE+H     +E +    +EEE E 
Sbjct: 132 AQSDSMQCNDKEKRLNSSLGYGYGHGGEAEFPGDCTSESHSVVVAEELQEDPGIEEEDEK 191

Query: 181 VSMSEVHLTTTDFQTSCEKESGSLLTMESLAIPGSTLPAKATLVTSDLEEISLAEEVVGG 240
              S++     D+ T            ES+A+     P K        +     +EV GG
Sbjct: 192 CESSDLKKIGEDYPT---------FASESMAVYQIVGPRKGATCGGPEDGF---KEVAGG 251

Query: 241 HVDGRKNILIGNDHSDGGIFEKG----------------------GAGGSGSGGGPGLLA 300
           +    +   +G +  D    + G                      G  G GSGGGPG  A
Sbjct: 252 YTGKGRRGFMGRNSGDNVFMDGGINPHQGVNLRHDAVKRRQMVQQGPVGCGSGGGPGNFA 311

Query: 301 GNCKIGGRIPTYGGL------IREDYGFFKGGSEASGSFGDLG-FAGRVVG 311
           G  K G    +YGGL      +  +  F +GGS ASGS G  G F+G  +G
Sbjct: 312 GCGKFGVGTASYGGLRDHLGSLDREGRFLRGGSAASGSGGGPGKFSGEKLG 342

BLAST of Spo21956.1 vs. NCBI nr
Match: gi|870850668|gb|KMT02734.1| (hypothetical protein BVRB_8g193200 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 154.8 bits (390), Expect = 3.600e-34
Identity = 73/158 (46.20%), Postives = 100/158 (63.29%), Query Frame = 1

		  

Query: 1   MHAWIGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLN 60
           M  WI E+FAYIT+K   GI D+EEE++IRRELQLP F+G N E WIL LED+F +F+LN
Sbjct: 249 MQRWIYEEFAYITQKGNGGISDLEEEQRIRRELQLPSFDGRNYEEWILILEDSFQYFQLN 308

Query: 61  EEAKLKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRFGFSRQTPKK-LNGKAEH 120
           EE K +AA++ L+GDA +WF+WEH+RW FN W E++  + R F  S  T ++  +G  +H
Sbjct: 309 EETKFQAAVMALEGDAQRWFEWEHRRWSFNGWQEMEKHLSRSFNPSSMTTQRGWDGMVKH 368

Query: 121 QNFSSSQVCGGLPMFIEAMVGSQGNYHSPSENHKKEAK 158
           QN S S   GG+           G    P +  +K  +
Sbjct: 369 QNISMSYSHGGMSNVTGCCTKDNGKLVVPKKQARKSGR 406

BLAST of Spo21956.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CHJ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g108880 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.000e-36
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 1

		  

Query: 1   MHAWIGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLN 60
           M  WI E+FAYIT KR +G  D+EEER+IRRELQLPEFNG NPEGWI+ELED FHFF+L+
Sbjct: 12  MQMWINEEFAYITHKRDRGFSDLEEERRIRRELQLPEFNGRNPEGWIMELEDIFHFFQLD 71

Query: 61  EEAKLKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRFG 105
           E AKLKAA +TL GDA +WF+WEH+R PF++W ELK+ V R FG
Sbjct: 72  ESAKLKAATMTLVGDAHRWFEWEHRRRPFHEWKELKALVWRYFG 115

BLAST of Spo21956.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BRV9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g193200 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.500e-34
Identity = 73/158 (46.20%), Postives = 100/158 (63.29%), Query Frame = 1

		  

Query: 1   MHAWIGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLN 60
           M  WI E+FAYIT+K   GI D+EEE++IRRELQLP F+G N E WIL LED+F +F+LN
Sbjct: 249 MQRWIYEEFAYITQKGNGGISDLEEEQRIRRELQLPSFDGRNYEEWILILEDSFQYFQLN 308

Query: 61  EEAKLKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRFGFSRQTPKK-LNGKAEH 120
           EE K +AA++ L+GDA +WF+WEH+RW FN W E++  + R F  S  T ++  +G  +H
Sbjct: 309 EETKFQAAVMALEGDAQRWFEWEHRRWSFNGWQEMEKHLSRSFNPSSMTTQRGWDGMVKH 368

Query: 121 QNFSSSQVCGGLPMFIEAMVGSQGNYHSPSENHKKEAK 158
           QN S S   GG+           G    P +  +K  +
Sbjct: 369 QNISMSYSHGGMSNVTGCCTKDNGKLVVPKKQARKSGR 406

BLAST of Spo21956.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBW8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g092900 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 6.300e-30
Identity = 65/104 (62.50%), Postives = 79/104 (75.96%), Query Frame = 1

		  

Query: 1   MHAWIGEDFAYITRKRGQGIPDMEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLN 60
           M  WI E+FAYIT KR   I D EEE +IR+ELQ+ EFNG N + WIL+LED F FF+LN
Sbjct: 12  MQTWIREEFAYITHKRDLEISDSEEESRIRQELQIHEFNGGNSKDWILQLEDFFEFFQLN 71

Query: 61  EEAKLKAAIITLDGDALQWFQWEHQRWPFNDWHELKSQVVRRFG 105
           EEAKLK +II L+GDA +WF+ EH+R PF DW ELK Q++R FG
Sbjct: 72  EEAKLKVSIIGLNGDARRWFEDEHRRRPFYDWQELKGQMLRHFG 115

BLAST of Spo21956.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUC2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_027750 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.100e-25
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1

		  

Query: 395 GFEAYVGLLLLQTAFVGVVSEWQVVFCGFLLVLMAIGNFANTVQTLLVKSRFKAKMKRTK 454
           GFEAYVGLLLLQTAFVGVVSEWQVVFCGFLLVLMAIGNFANTVQTLLVKSRFKAKMKRTK
Sbjct: 294 GFEAYVGLLLLQTAFVGVVSEWQVVFCGFLLVLMAIGNFANTVQTLLVKSRFKAKMKRTK 353

Query: 455 SKQQLD 461
           SKQQLD
Sbjct: 354 SKQQLD 359

BLAST of Spo21956.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHR5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177680 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.200e-23
Identity = 64/122 (52.46%), Postives = 82/122 (67.21%), Query Frame = 1

		  

Query: 16  RGQGIPDMEEERKIRRELQLPE-FNGVNPEGWILELEDTFHFFRLNEEAKLKAAIITLDG 75
           R   + ++EE +  R   +  E FN  N +GWIL+LEDTFHFFRL+EEAKLKAAII+LDG
Sbjct: 40  RTSHVREVEEYQSSRMSGESDESFNFQNFDGWILQLEDTFHFFRLDEEAKLKAAIISLDG 99

Query: 76  DALQWFQWEHQRWPFNDWHELKSQVVRRFGFS-----RQTPKKLNGKAEHQNFSSSQVCG 132
           +A +WF+WEHQRWPF  W ELK+QV R FG S     ++ P  L    +H++ SSS    
Sbjct: 100 EAKRWFEWEHQRWPFYRWLELKNQVRRCFGSSPAVSWQKEPTTLMFDDKHRHSSSSHGYS 159

BLAST of Spo21956.1 vs. TAIR (Arabidopsis)
Match: AT1G33230.1 (TMPIT-like protein)

HSP 1 Score: 93.6 bits (231), Expect = 3.400e-19
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 1

		  

Query: 395 GFEAYVGLLLLQTAFVGVVSEWQVVFCGFLLVLMAIGNFANTVQTLLVKSRFKAKMKRTK 454
           GFEAYVG  LL+T  +GVV+EWQV+ CG LLV+MAIGNF NTV+TL+VKSRFKAKMKR+K
Sbjct: 283 GFEAYVGFQLLRTVLMGVVAEWQVLVCGILLVVMAIGNFINTVETLMVKSRFKAKMKRSK 342

Query: 455 SKQQL 460
           S+ +L
Sbjct: 343 SRAEL 347

BLAST of Spo21956.1 vs. TAIR (Arabidopsis)
Match: AT4G10430.1 (TMPIT-like protein)

HSP 1 Score: 88.2 bits (217), Expect = 1.400e-17
Identity = 44/65 (67.69%), Postives = 55/65 (84.62%), Query Frame = 1

		  

Query: 396 FEAYVGLLLLQTAFVGVVSEWQVVFCGFLLVLMAIGNFANTVQTLLVKSRFKAKMKRTKS 455
           FEAYVGLLLL+    GVV+EWQV+ CG LLV+MA+GNF NTV+TL+ KSR KAKMKR+KS
Sbjct: 283 FEAYVGLLLLRKTVTGVVNEWQVMVCGILLVVMAVGNFINTVETLMAKSRVKAKMKRSKS 342

Query: 456 KQQLD 461
           + +L+
Sbjct: 343 RAELN 347

BLAST of Spo21956.1 vs. TAIR (Arabidopsis)
Match: AT1G67020.1 (unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 2.000e-6
Identity = 22/81 (27.16%), Postives = 41/81 (50.62%), Query Frame = 1

		  

Query: 23  MEEERKIRRELQLPEFNGVNPEGWILELEDTFHFFRLNEEAKLKAAIITLDGDALQWFQW 82
           ++    + R +++P F+G     W  ++E  F   R  +  KL    ++L+G AL+WF  
Sbjct: 100 LDNRSSLIRRIEMPVFDGSGVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKWFLR 159

Query: 83  EHQRWPFNDWHELKSQVVRRF 104
           E     F DW+  + +++ RF
Sbjct: 160 EMSTLEFRDWNSFEQRLLARF 180

The following BLAST results are available for this feature:
BLAST of Spo21956.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731346560|ref|XP_010684517.1|7.6e-6143.9PREDICTED: uncharacterized pro... [more]
gi|731318549|ref|XP_010669787.1|2.6e-3770.8PREDICTED: keratin, type I cyt... [more]
gi|870860211|gb|KMT11574.1|2.9e-3669.2hypothetical protein BVRB_5g10... [more]
gi|731372571|ref|XP_010666388.1|5.0e-3637.0PREDICTED: uncharacterized pro... [more]
gi|870850668|gb|KMT02734.1|3.6e-3446.2hypothetical protein BVRB_8g19... [more]
back to top
BLAST of Spo21956.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8CHJ4_BETVU2.0e-3669.2Uncharacterized protein OS=Bet... [more]
A0A0J8BRV9_BETVU2.5e-3446.2Uncharacterized protein OS=Bet... [more]
A0A0J8BBW8_BETVU6.3e-3062.5Uncharacterized protein OS=Bet... [more]
A0A0K9RUC2_SPIOL2.1e-25100.Uncharacterized protein OS=Spi... [more]
A0A0K9QHR5_SPIOL1.2e-2352.4Uncharacterized protein OS=Spi... [more]
back to top
BLAST of Spo21956.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo21956.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G33230.13.4e-1972.3TMPIT-like protein[more]
AT4G10430.11.4e-1767.6TMPIT-like protein[more]
AT1G67020.12.0e-627.1unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012926TMPIT-likePANTHERPTHR21433TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHAcoord: 395..457
score: 3.4
IPR012926TMPIT-likePFAMPF07851TMPITcoord: 395..446
score: 3.7
NoneNo IPR availablePANTHERPTHR21433:SF4SUBFAMILY NOT NAMEDcoord: 395..457
score: 3.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0009555 pollen development
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019745 pentacyclic triterpenoid biosynthetic process
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009704 de-etiolation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0090333 regulation of stomatal closure
biological_process GO:0071277 cellular response to calcium ion
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0010260 animal organ senescence
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0006449 regulation of translational termination
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0032957 inositol trisphosphate metabolic process
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0019216 regulation of lipid metabolic process
biological_process GO:0009637 response to blue light
biological_process GO:0042548 regulation of photosynthesis, light reaction
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0010155 regulation of proton transport
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0016310 phosphorylation
biological_process GO:0009620 response to fungus
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0010218 response to far red light
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0010351 lithium ion transport
biological_process GO:0006869 lipid transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010114 response to red light
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006863 purine nucleobase transport
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0015979 photosynthesis
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0051301 cell division
biological_process GO:0006810 transport
biological_process GO:0009611 response to wounding
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006621 protein retention in ER lumen
biological_process GO:0055085 transmembrane transport
biological_process GO:0009408 response to heat
biological_process GO:0006811 ion transport
biological_process GO:0042908 xenobiotic transport
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0019530 taurine metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0032880 regulation of protein localization
biological_process GO:0030163 protein catabolic process
biological_process GO:0006597 spermine biosynthetic process
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0006657 CDP-choline pathway
biological_process GO:0006560 proline metabolic process
biological_process GO:0042793 plastid transcription
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0009902 chloroplast relocation
cellular_component GO:0018444 translation release factor complex
cellular_component GO:0009523 photosystem II
cellular_component GO:0010287 plastoglobule
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005622 intracellular
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009507 chloroplast
molecular_function GO:0047325 inositol tetrakisphosphate 1-kinase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0046923 ER retention sequence binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0004176 ATP-dependent peptidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0004105 choline-phosphate cytidylyltransferase activity
molecular_function GO:0004014 adenosylmethionine decarboxylase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003747 translation release factor activity
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0016871 cycloartenol synthase activity
molecular_function GO:0004462 lactoylglutathione lyase activity
molecular_function GO:0047800 cysteamine dioxygenase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo230350.81Barchart | Table
Spo120050.78Barchart | Table
Spo224720.78Barchart | Table
Spo215810.76Barchart | Table
Spo157040.76Barchart | Table
Spo212740.76Barchart | Table
Spo093780.75Barchart | Table
Spo213610.75Barchart | Table
Spo042560.75Barchart | Table
Spo072350.75Barchart | Table
Spo142640.74Barchart | Table
Spo116300.74Barchart | Table
Spo041230.73Barchart | Table
Spo047190.73Barchart | Table
Spo026490.73Barchart | Table
Spo241450.72Barchart | Table
Spo194440.72Barchart | Table
Spo300010.72Barchart | Table
Spo153080.72Barchart | Table
Spo024430.72Barchart | Table
Spo126660.72Barchart | Table
Spo139280.72Barchart | Table
Spo194420.72Barchart | Table
Spo116350.71Barchart | Table
Spo072370.71Barchart | Table
Spo170000.71Barchart | Table
Spo202940.71Barchart | Table
Spo000890.70Barchart | Table
Spo149230.70Barchart | Table
Spo272500.70Barchart | Table
Spo126820.70Barchart | Table
Spo011350.70Barchart | Table
Spo256480.70Barchart | Table
Spo029790.69Barchart | Table
Spo170380.69Barchart | Table
Spo169300.69Barchart | Table
Spo079100.69Barchart | Table
Spo072340.69Barchart | Table
Spo259530.69Barchart | Table
Spo100860.69Barchart | Table
Spo097830.69Barchart | Table
Spo248470.69Barchart | Table
Spo099380.69Barchart | Table
Spo252620.68Barchart | Table
Spo094120.68Barchart | Table
Spo148300.68Barchart | Table
Spo159950.68Barchart | Table
Spo188440.68Barchart | Table
Spo194570.68Barchart | Table
Spo050120.68Barchart | Table
Spo036380.68Barchart | Table
Spo019280.68Barchart | Table
Spo017880.68Barchart | Table
Spo234150.68Barchart | Table
Spo238540.68Barchart | Table
Spo248770.68Barchart | Table
Spo253240.68Barchart | Table
Spo254660.67Barchart | Table
Spo088110.67Barchart | Table
Spo008770.67Barchart | Table
Spo080480.67Barchart | Table
Spo236260.67Barchart | Table
Spo105390.67Barchart | Table
Spo239930.67Barchart | Table
Spo055080.67Barchart | Table
Spo115730.67Barchart | Table
Spo224040.67Barchart | Table
Spo152150.67Barchart | Table
Spo175770.66Barchart | Table
Spo050130.66Barchart | Table
Spo099040.66Barchart | Table
Spo208370.66Barchart | Table
Spo103310.66Barchart | Table
Spo215440.66Barchart | Table
Spo123320.66Barchart | Table
Spo255770.66Barchart | Table
Spo119640.66Barchart | Table
Spo144730.66Barchart | Table
Spo152080.66Barchart | Table
Spo153690.66Barchart | Table
Spo247790.66Barchart | Table
Spo083430.65Barchart | Table
Spo118790.65Barchart | Table
Spo130890.65Barchart | Table
Spo226650.65Barchart | Table
Spo113030.65Barchart | Table
Spo125760.65Barchart | Table