Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGATGATGATGGAGAAAGAGGCCACGAAACAAGAACTGAATAATAATGCTGTAATTAGGGTTAATGATCATGATGATGATCATGCCGATGAAAGCGATCAGCTGGATTTATATTACGACGACAATATTGATGATGATGATATTCGATATGGATGCGAAGATTATTGCCAATTAAGACGAGGAAAAACAAGCTCGGTTACAAAGAAGAATAGGATGATTCGCAAGAATCATAGGGCCCGAAAATATTGAAAGAACAACCTCAATACTACATGTTATAAGACGAGCGAGGAATTGAGATCAATGGAAGTCAAACGATGAACTATTGAACTAATTACGCAGATTCAAGTCAATTATGATCTTATTTGGTTTAATAATTAAGTTGATGTTTTATTACAACTTTGTTTTATGTTTCCTCTCAATACCCATGACAAACATGTACATTTAGTATATAAAACCTTTTACCAAACTTTGATTTAGAGATAGATCATAAAACCAAAACAAAAACCCTACAATTAATTAATATGAAAGCAATAATGCAATCGTTGCAAGCTAAAGATGGTGAACGAGTTTCTTGGATAGTCTAATTCGTAGTGATCCCTAAACAACACTAAATAATACTTCGCTTCTAATGTTCTATGTTTCATTAAAAAAAATTGTGGAATAAAAAAAAAATTGATTTTCGGAATTAGTAATGAAATGTCATCGTATATAATTAAATTATTAACTAATTAAATAAATAATATTAGAGTCGACATGATTGACTACTTAATGATAAACATAGATTCCACAAATTAACATAGAATTATTATTATCTTTAAAACACTCCATACATATATAGATTTTAACGTAAATTTATCCTACTTTTACTTTTCTCATATTAAGATAAATATTTTAAAAAATGATAACGAATAAAAAAAATAGAAGATTTCAACGTAAATTTATCATACTTTTACTTTTCCCATATTTTGTACATATCGTTTTCATTATGCGATAAGGATTAAGGGCCATGGGTTTAATTGCTACAAAATAACATGGAATGATGGAAAATATCAATACGTACACAAAAAGATCCTTAAGATTGTTATACTCCGTACCAAATAGTCAAACACATATTCTAATTTATTTTATTCTTTTTTGCANTCAAACACATATTCTAATTTATTTTATTCTTTTTTGCAAATTTTTACTGAAATATATAGTAGATTTTATTTCATTAAACCTTTGATATTTGGATTAATTTATATTATTAATAGAATTCTACTTGCATTATTTCATATTCTATATCTTCCATGTTTTATAATCTATAATATATTACCCATAATGATAAGATAAATTTTTAAAAAGATGATAATTAACATAGAATTATTATTACTTTAAAACACTCCATACGAATATCTCTACCATGTTTTATACTCCGTGTATATTACACATAGTGATAAGATAAATATTTAAAAAGCTGATAACAAATAAAAAGATAGTAGATTTCAACGTAAATTTATCCTACTTTTACTTTTTCCATATTTTTTTAACGTTATATTAAAGGAAACTTAATACAAAGTAAATGGGGTTTATAGGGTAAATTTAATACAGCATACAAAAATGAAGCAATCGAATGGACTAAACAGAATATGGGGCGACAAATATAAGGACAGAGTGAGTCTATACGACTATACTTATACAAAGTATATGTAATAATTTTGTAGAGAACACATGAATAACTAACTCGAGTTTTACCATTATTGAACTAACCATTTGATTTGTATTATACGTATGCTTTATAAAACAACTATTTGTATACGATGATATAATAAGACAAATATGTACGAAAATTGATAAACCCGTGTATCGCACGGGCTTCAATACTAGTATTCTATAAAGGGACACCAAAAGATCAACTATTAAAAAAACCTTAAGACTTTACTAATGTGATATGAGATATAAGTCTGTATGAATTAGGAAAACCTACAAAGAGTAGGGGATATACGACATGTGATATAAAATATAACTTTATAAGTCTATATAAATTAAAAAACCTTACAAAAATAGGAGATTTCGTTGTTTGTATTATAAATAGAGGCGTATGCCATTATAAAATCCACAACCCAACTTCCCTCAATAATATTTTTAACATAACTGCTTGGTTTCCAAATCCCGCGCCATCTCTAGAACTCAAGTTCAGTTCTTTTCTATTTCCAGATTATTCGAATTCCTTTTTACTCAATTTTTGGTTTCGAATTTGAATTCAGCTTGATTTTTCAGTTTTTTTCGCAATTTGTTGCTGGGTATTATCTGTCCTCCTCCATTGAAGCACGATGAAGAAGATTTCTTTTTCTGTTTCATCAAATCGATCGAACACCGAACGTAAACAAAGCTTAATTGCTTCTACCTCTCAAAAACCCCAAATCAATCGCAATCAATAACGGAATTCGACCCATCTAAAGCCCTAACCCTAGAACAAAACGCCCCCAAAAGATTTGTAATCCCTCCTAAGCCGAACGAATGGCGTCCCGCCAAGAAGATGAAGAATCTCGACCTTTCGCCTATTCATTCCGATGGTAAACCCCTTGAATTCGAGGTTATATCTTCCGGTGTTGCTGCCCCAGAATCCGAATCAAACCTTTCGTATGGATTGATTCTTCGGCAGCAAGATTCGGTCAATGGTAAGGTTGATTCCGGTTTTCCTAATTCAGTTGATGCTGTTATGCTTAGGAAATTGAAGACTGATTTAGATAAGTTACCTGATGATGAGGGTTTTGATCAGTTTGAGGAGGTTCCGATCGAGGGTTTTGGGGAAGCTTTGTGGGCTGGGTATGGGTGGAGACCAGGGATGGGAATTGGAAGGAATGCTAAGGAGGTTGTCGAGGTTGTTGAGTATAAACGGCGCAACGCGAAAGAGGGGATAGGGTTTATTGATGATAATGTGAATGAAGTGACTGAGTTGAAAATTGGTAGAGAGGAGGGTAGAAGAGGTGATACGGGTGAAGTTAAGCATGAAAGGATCCAGGTAGATGAGAATAGGACTAGTAGTGGAGTTTCTTGGCTTAGGAGTCATATTAGGGTTAGAATTATTAGCAAATCATTCAAAGGTGGAAAATTTTACTTGAAGAAGGGTGTAGTAATGGATGCAATTGGAGCCAGGACTTGTGATATATTGATGGAAGAAGATAGGGAGATTGTTCAGGGAGTAAACCAGGATATATTGGAAACTGTCCTTCCTAGGCGAGGTGGTCCTGTTCTTGTTCTCTTTGGAAAGCATAAGGGTGTATATGGCAGTCTCGTGGAAAGAGATACAGAGAGGGAAACTGCTGTAGTTCAAGATGCTGGTACACACGAAATGCTCCATGTGCAGCTTGAACAAATAGCTGAATTTTTTGGAGATCCAAGCGACATTGGTTACTAAACAAGGATGCTGTATTTAATTTAAACCAGTATGGCAAGGTGATTTATCTGCTACATTAAACTAATGGGTTGTTCTGATTTATCATGTATATCTTATGCCTCTGATACTTTTATGAATGTGATTTTGGATGTGTAAAATTCAAGCAAGCTGTTATAAGACTGTTTTTTTTTTAAAATTGCTTGGTGATATACTATGTTATTGTCGATCAAGCTTGAACTCCAATGATTAATTCTAATGATTTGTTTTGCACTTGTTGAACATATTAGTTTTTGATCACTATTACTCATCGTGATCTTGAAGTGTTTGATACTGGTTAATTTGAATTGATAATAAACCAACTCATTTCTAGTCATAAGTTCTTTAATATAGAAGATAATGAGTTATCGTGGAGGGACTAATAGTTAACTCAGGCTCCGTTCTATTCGACTTATTTTTGTGAACTTATATTATCTGAACTTTACTGAACTTATATTAACTTATCTGAACTTGTTTTATCTAAAAAAACTTATGTGTGTGTGAAATTGTCTCAACTGAACGTATACTATATGAACTTATCTTATCTGGACTTATTTTGTCTGAAATAAGTCAAAATAAGTCAAACAAAACATAGCATTAATATTGTTTACTTTAAAATTGTTTACCAGATTACTGTGTTAGAACTCAGAAGACAGCTCATACCTGAGTTCAACATCATGTAAGTGGTGTTGATCACTCATTAACCGGTCAGTTAATTTAGGCTTCAGGAACTTTCTCCTGTATGATGATGATCCATGGCAGCTACATCATCTTCTTCAGTCATTTCTTGGTGTTGCAAACCTCAGCACAAGGTGGCGACACCATGATTCAACTCTGACAATTTCAACACTTCCAAAACCCTTTTCATTATCTAAACCCTCTAATTTTGTGAAATTCACCAATACTGCGAATATTGCAGATGATGTCACTCAGGTGGTTTTTTCTCGTATTCCGCTTTCGATTATTCATTTGTTTTTCATGGGTTTTACTTATTTTTTTGAATTAGTTCCTGTTGTTTATGATACATTTTTGTACTCCATAGTTCTTATTTTTGCCTAATTTGGTACGTTGGAGTAATGTGACATTGGTTTTTGCAAGCTGGTGTTGATTCGGTTTATGCGTTTGCTGCGAATAGTTAACATAGATTTTAGCACTGTTATTGTGAGGATTAGGAAGCTTATTCTCATAACTTAGGTCTATGTTACTCAGGCTCAACCAGAGGTCCAGAAGTGTTGGAAATGGGTATTGGTTCAAGTATTAGAGACAACCATCTTATGA ATGATGAAGATGATGATGGAGAAAGAGGCCACGAAACAAGAACTGAATAATAATGCTGTAATTAGGGTTAATGATCATGATGATGATCATGCCGATGAAAGCGATCAGCTGGATTTATATTACGACGACAATATTGATGATGATGATATTCGATATGGATGCGAAGATTATTGCCAATTAAGACGAGGAAAAACAAGCTCGCTTAATTGCTTCTACCTCTCAAAAACCCCAAATCAATCGCAATCAATAACGGAATTCGACCCATCTAAAGCCCTAACCCTAGAACAAAACGCCCCCAAAAGATTTGTAATCCCTCCTAAGCCGAACGAATGGCGTCCCGCCAAGAAGATGAAGAATCTCGACCTTTCGCCTATTCATTCCGATGGTAAACCCCTTGAATTCGAGGTTATATCTTCCGGTGTTGCTGCCCCAGAATCCGAATCAAACCTTTCGTATGGATTGATTCTTCGGCAGCAAGATTCGGTCAATGGTAAGGTTGATTCCGGTTTTCCTAATTCAGTTGATGCTGTTATGCTTAGGAAATTGAAGACTGATTTAGATAAGTTACCTGATGATGAGGGTTTTGATCAGTTTGAGGAGGTTCCGATCGAGGGTTTTGGGGAAGCTTTGTGGGCTGGGTATGGGTGGAGACCAGGGATGGGAATTGGAAGGAATGCTAAGGAGGTTGTCGAGGTTGTTGAGTATAAACGGCGCAACGCGAAAGAGGGGATAGGGTTTATTGATGATAATGTGAATGAAGTGACTGAGTTGAAAATTGGTAGAGAGGAGGGTAGAAGAGGTGATACGGGTGAAGTTAAGCATGAAAGGATCCAGGTAGATGAGAATAGGACTAGTAGTGGAGTTTCTTGGCTTAGGAGTCATATTAGGGTTAGAATTATTAGCAAATCATTCAAAGGTGGAAAATTTTACTTGAAGAAGGGTGTAGTAATGGATGCAATTGGAGCCAGGACTTGTGATATATTGATGGAAGAAGATAGGGAGATTGTTCAGGGAGTAAACCAGGATATATTGGAAACTGTCCTTCCTAGGCGAGGTGGTCCTGTTCTTGTTCTCTTTGGAAAGCATAAGGGTGTATATGGCAGTCTCGTGGAAAGAGATACAGAGAGGGAAACTGCTGTAGTTCAAGATGCTGGTACACACGAAATGCTCCATGTGCAGCTTGAACAAATAGCTGAATTTTTTGGAGATCCAAGCGACATTGGCTTCAGGAACTTTCTCCTGTATGATGATGATCCATGGCAGCTACATCATCTTCTTCAGTCATTTCTTGGTGTTGCAAACCTCAGCACAAGGTGGCGACACCATGATTCAACTCTGACAATTTCAACACTTCCAAAACCCTTTTCATTATCTAAACCCTCTAATTTTGTGAAATTCACCAATACTGCGAATATTGCAGATGATGTCACTCAGGCTCAACCAGAGGTCCAGAAGTGTTGGAAATGGGTATTGGTTCAAGTATTAGAGACAACCATCTTATGA ATGATGAAGATGATGATGGAGAAAGAGGCCACGAAACAAGAACTGAATAATAATGCTGTAATTAGGGTTAATGATCATGATGATGATCATGCCGATGAAAGCGATCAGCTGGATTTATATTACGACGACAATATTGATGATGATGATATTCGATATGGATGCGAAGATTATTGCCAATTAAGACGAGGAAAAACAAGCTCGCTTAATTGCTTCTACCTCTCAAAAACCCCAAATCAATCGCAATCAATAACGGAATTCGACCCATCTAAAGCCCTAACCCTAGAACAAAACGCCCCCAAAAGATTTGTAATCCCTCCTAAGCCGAACGAATGGCGTCCCGCCAAGAAGATGAAGAATCTCGACCTTTCGCCTATTCATTCCGATGGTAAACCCCTTGAATTCGAGGTTATATCTTCCGGTGTTGCTGCCCCAGAATCCGAATCAAACCTTTCGTATGGATTGATTCTTCGGCAGCAAGATTCGGTCAATGGTAAGGTTGATTCCGGTTTTCCTAATTCAGTTGATGCTGTTATGCTTAGGAAATTGAAGACTGATTTAGATAAGTTACCTGATGATGAGGGTTTTGATCAGTTTGAGGAGGTTCCGATCGAGGGTTTTGGGGAAGCTTTGTGGGCTGGGTATGGGTGGAGACCAGGGATGGGAATTGGAAGGAATGCTAAGGAGGTTGTCGAGGTTGTTGAGTATAAACGGCGCAACGCGAAAGAGGGGATAGGGTTTATTGATGATAATGTGAATGAAGTGACTGAGTTGAAAATTGGTAGAGAGGAGGGTAGAAGAGGTGATACGGGTGAAGTTAAGCATGAAAGGATCCAGGTAGATGAGAATAGGACTAGTAGTGGAGTTTCTTGGCTTAGGAGTCATATTAGGGTTAGAATTATTAGCAAATCATTCAAAGGTGGAAAATTTTACTTGAAGAAGGGTGTAGTAATGGATGCAATTGGAGCCAGGACTTGTGATATATTGATGGAAGAAGATAGGGAGATTGTTCAGGGAGTAAACCAGGATATATTGGAAACTGTCCTTCCTAGGCGAGGTGGTCCTGTTCTTGTTCTCTTTGGAAAGCATAAGGGTGTATATGGCAGTCTCGTGGAAAGAGATACAGAGAGGGAAACTGCTGTAGTTCAAGATGCTGGTACACACGAAATGCTCCATGTGCAGCTTGAACAAATAGCTGAATTTTTTGGAGATCCAAGCGACATTGGCTTCAGGAACTTTCTCCTGTATGATGATGATCCATGGCAGCTACATCATCTTCTTCAGTCATTTCTTGGTGTTGCAAACCTCAGCACAAGGTGGCGACACCATGATTCAACTCTGACAATTTCAACACTTCCAAAACCCTTTTCATTATCTAAACCCTCTAATTTTGTGAAATTCACCAATACTGCGAATATTGCAGATGATGTCACTCAGGCTCAACCAGAGGTCCAGAAGTGTTGGAAATGGGTATTGGTTCAAGTATTAGAGACAACCATCTTATGA MMKMMMEKEATKQELNNNAVIRVNDHDDDHADESDQLDLYYDDNIDDDDIRYGCEDYCQLRRGKTSSLNCFYLSKTPNQSQSITEFDPSKALTLEQNAPKRFVIPPKPNEWRPAKKMKNLDLSPIHSDGKPLEFEVISSGVAAPESESNLSYGLILRQQDSVNGKVDSGFPNSVDAVMLRKLKTDLDKLPDDEGFDQFEEVPIEGFGEALWAGYGWRPGMGIGRNAKEVVEVVEYKRRNAKEGIGFIDDNVNEVTELKIGREEGRRGDTGEVKHERIQVDENRTSSGVSWLRSHIRVRIISKSFKGGKFYLKKGVVMDAIGARTCDILMEEDREIVQGVNQDILETVLPRRGGPVLVLFGKHKGVYGSLVERDTERETAVVQDAGTHEMLHVQLEQIAEFFGDPSDIGFRNFLLYDDDPWQLHHLLQSFLGVANLSTRWRHHDSTLTISTLPKPFSLSKPSNFVKFTNTANIADDVTQAQPEVQKCWKWVLVQVLETTIL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21747.1 vs. NCBI nr
Match: gi|902218699|gb|KNA18100.1| (hypothetical protein SOVF_073830 [Spinacia oleracea]) HSP 1 Score: 586.6 bits (1511), Expect = 4.000e-164 Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 1
BLAST of Spo21747.1 vs. NCBI nr
Match: gi|674960147|emb|CDX73282.1| (BnaC05g28240D [Brassica napus]) HSP 1 Score: 313.9 bits (803), Expect = 5.000e-82 Identity = 174/357 (48.74%), Postives = 235/357 (65.83%), Query Frame = 1
BLAST of Spo21747.1 vs. NCBI nr
Match: gi|674906160|emb|CDY26928.1| (BnaA05g17840D [Brassica napus]) HSP 1 Score: 308.1 bits (788), Expect = 2.700e-80 Identity = 175/356 (49.16%), Postives = 228/356 (64.04%), Query Frame = 1
BLAST of Spo21747.1 vs. NCBI nr
Match: gi|297799490|ref|XP_002867629.1| (predicted protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 290.8 bits (743), Expect = 4.500e-75 Identity = 162/357 (45.38%), Postives = 223/357 (62.46%), Query Frame = 1
BLAST of Spo21747.1 vs. NCBI nr
Match: gi|727514731|ref|XP_010433697.1| (PREDICTED: protein MOS2-like [Camelina sativa]) HSP 1 Score: 286.2 bits (731), Expect = 1.100e-73 Identity = 165/354 (46.61%), Postives = 218/354 (61.58%), Query Frame = 1
BLAST of Spo21747.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RF61_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_073830 PE=4 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 2.800e-164 Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 1
BLAST of Spo21747.1 vs. UniProtKB/TrEMBL
Match: F6HXY8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g01640 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 2.600e-85 Identity = 190/388 (48.97%), Postives = 243/388 (62.63%), Query Frame = 1
BLAST of Spo21747.1 vs. UniProtKB/TrEMBL
Match: A0A078C8U8_BRANA (BnaC05g28240D protein OS=Brassica napus GN=BnaC05g28240D PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 3.500e-82 Identity = 174/357 (48.74%), Postives = 235/357 (65.83%), Query Frame = 1
BLAST of Spo21747.1 vs. UniProtKB/TrEMBL
Match: A0A078GQK3_BRANA (BnaA05g17840D protein OS=Brassica napus GN=BnaA05g17840D PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 1.900e-80 Identity = 175/356 (49.16%), Postives = 228/356 (64.04%), Query Frame = 1
BLAST of Spo21747.1 vs. UniProtKB/TrEMBL
Match: D7MGK3_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_657587 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 3.100e-75 Identity = 162/357 (45.38%), Postives = 223/357 (62.46%), Query Frame = 1
BLAST of Spo21747.1 vs. ExPASy Swiss-Prot
Match: MOS2_ARATH (Protein MOS2 OS=Arabidopsis thaliana GN=MOS2 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.700e-42 Identity = 86/151 (56.95%), Postives = 112/151 (74.17%), Query Frame = 1
BLAST of Spo21747.1 vs. ExPASy Swiss-Prot
Match: GPKOW_XENLA (G patch domain and KOW motifs-containing protein OS=Xenopus laevis GN=gpkow PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.100e-15 Identity = 49/160 (30.63%), Postives = 88/160 (55.00%), Query Frame = 1
BLAST of Spo21747.1 vs. ExPASy Swiss-Prot
Match: GPKOW_HUMAN (G patch domain and KOW motifs-containing protein OS=Homo sapiens GN=GPKOW PE=1 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 3.800e-13 Identity = 39/118 (33.05%), Postives = 69/118 (58.47%), Query Frame = 1
BLAST of Spo21747.1 vs. ExPASy Swiss-Prot
Match: GPKOW_DANRE (G patch domain and KOW motifs-containing protein OS=Danio rerio GN=gpkow PE=2 SV=2) HSP 1 Score: 75.5 bits (184), Expect = 1.900e-12 Identity = 50/156 (32.05%), Postives = 80/156 (51.28%), Query Frame = 1
BLAST of Spo21747.1 vs. ExPASy Swiss-Prot
Match: GPKOW_MOUSE (G patch domain and KOW motifs-containing protein OS=Mus musculus GN=Gpkow PE=1 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 1.300e-10 Identity = 45/156 (28.85%), Postives = 74/156 (47.44%), Query Frame = 1
BLAST of Spo21747.1 vs. TAIR (Arabidopsis)
Match: AT4G25020.1 (D111/G-patch domain-containing protein) HSP 1 Score: 277.3 bits (708), Expect = 1.800e-74 Identity = 159/362 (43.92%), Postives = 221/362 (61.05%), Query Frame = 1
BLAST of Spo21747.1 vs. TAIR (Arabidopsis)
Match: AT1G33520.1 (D111/G-patch domain-containing protein) HSP 1 Score: 175.3 bits (443), Expect = 9.700e-44 Identity = 86/151 (56.95%), Postives = 112/151 (74.17%), Query Frame = 1
BLAST of Spo21747.1 vs. TAIR (Arabidopsis)
Match: AT1G55460.1 (DNA/RNA-binding protein Kin17, conserved region) HSP 1 Score: 63.5 bits (153), Expect = 4.100e-10 Identity = 67/256 (26.17%), Postives = 113/256 (44.14%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21747.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21747.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21747.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo21747.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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