Spo21636 (gene)

Overview
NameSpo21636
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 55977778 .. 55981000 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCGTGCTTTTCGTGTTGGGACGTATTGGTCTGATCCAATGACCTATTTACTTCAAAGCGTAAGTAGGGGAAAGAAATATTAAACTATTGTTTAGAATTTTAGATTATTATCTTTTTGACAAATCATATTGTGAAATGGTCTTGAAAATGACCTTAAAGAAGATCAAGGAGATCAAAAGACTTCTCTGTACTTCATAATTTCTAAATAAACTCTTTAGATAATTGAAGGGATACTTTTGAACAGCTAATCATAACTTGATTACATAGTAGTTTTGATATCAAATCAAGGTACAATGTATTACATGAAAAGATAAACCACAAGCATTATAACCACGAGTTTGATAGCAATATACTATAGCAATATGCCAATATAAAATAAATTATTTACTGATACTCACCCTTTACCATAGGTAATAGGTCGTTAATGTTCACAATACTCCGTATAAGTCAATACACCGGCGTATCACTTCCGAACTTTCCTACTTCCCGCACTAATCACATGACTGTAACTGTATATGATTAAATACATCTCATATCGAGCAAGTTTAGTGCTAACGACGGCTAACTAATTCCCTTTGTTGTTCAACCACTTCACTATTACCTAATCACCAAGAAGGCAAGAATCCATATTGATTTGGTATATGTACACTACTTACGATAGGTAACGGATCACCAACACTAAACTATAAGTTAATGGCCATATCATATTAATCCTTTTTAGTTTTATAGTTTTCGCGCTAATCACGTAATTATAAGTCTGCAATCATATAAATTAAATCAAATATATCGTATATCGCATATCGGTCCGGTTGAGTGATATGGATGGCTAACTAGTTTCCTTTGCTATCCAAACCGCCAAAAGGCAAGAATCCATATTCATTTGGGATTCATCTCTTAAATTGTGCAAACAATCGTACACCCCCATTATTCCATTAACCATTGCCGGCCCTCAATGATTTCAACCAAATCAACATTATAAAAGATGAACTTGGTCAATCTCAAGCAAAAATACCCTAAATTATTTTATTAAAAAAACAAACAAGGCACTACCATCCTCTGTCTCTCTCTACTTAGCTGTCTGTTGCGCCTCTCTTTCTCTCTCCTTTCCCCCCTCCCTCTCTCTATCTGTCCTACCTGTCTGCGAGTTTCTGCTGCATCGGAAGGTGAGCTTTTTCTATCTCGTCATCTATCTTTCTTGTAATTGTTGTTGATTTTTCTGGGTTGATTGAATTATAGAGATTGAATTGTTTGTTTTGAAGTTCTGGGAATTGTGGGAAGATCAGAATTGTTGGTTTTGTTTCGTTAATTGTAAGAATTACTGAATTTTGATGAACTCTTTTGAAGTTTCATTTCATCGATCATTTTTATAATTGTCATGAAATTGGTTAAGATTGGATCTTGAATTTGTTGATTAGAGCTCTCTGGAATTCTGGGTTTTTGCTCTTGAATCGTTTCTGAAACGGGGTTTCTTTTTTATTATTATTTATGACATTTTTTTAATTGATGCAATGATTTATGCTTTGATTGACACAGAATGTAGTATCTTTTGTCAGACATTCAGATTCTTTGTTATAAATCCTTATTTTTTATATATATAAATTATTTATCTTTGTTGTGTTTGAATGAAAATGTGCAATACTGCTAAGAGTGTAGACACCATCTGGAATGGCTGGAAAGAGTTAGGTTTCCCCCTTTCCGTTCAGTGTGTTGGGGGTGGATTAATGTTTTGAAAGGAGGTGGGATAGTTATTTATGATGACATTGATGCTGAATTGCTGATACACTAAATGTAGGAGAGTTTCAGAAGATAATGGTTTACATGGAGATGTTTTTTAAGGTAAGGAATTATCGATCAACGGAAAAAGGGAATTAAGTCATTGAAGGGGGCTTCGGAATCTTCTTAGATTGCTTTTGGGTTGAAAGCTCTGACTAGAATATCAGAATCTGAATACAATTCTTTTAATTTTTTAAATGTTGTGACTCAATTCCTTCTGAATTGCTTACTCATTGGGATTCAATTCTAAAATTTCAATATCGGAGTTGGTGTTGGCACCAGCATGAAGTCACATCACCAATGAAGTTGAGGGAGGTGGTAAACACTTAGCCAATAAAGATTTAACATAGGAAAGAGAATAAAATGGAGGTTGTCTGTCGAAGGGAACAACAAGTGCAGATTTAGGAGCTAGTGTATGAAATTCCAGATATTAAATGCATCATTAAGGAGCTAGTGTATGAACATAGTGACCAATCATGATAAGAGCCAAACCTAATCCTGAAAGAGAAGCACATTAAAGAGGAAAGAAAAAACAACTCTATACACCAAATCCCTCTACTAGCAGATCTGCTTCTAAGGATTTTGTTCCCTGCCGTAGAACATTGTGACTGAGAGATAAAGATTGTGATGAATAAGTGAACTCTATAAAAGGGTCCGGGGATAATTTTGGATAACTTATGCTTAGAAGGTACAATTGTCCGGCACTCTCATAAGTATTCTGTTTGGAAATGTGAGAGGATGAATGGATATGGAACCCCTCTTTGTATAGACTCAACCTAACGTACTGCATCTATTTTTTGAACGAGAACTTTCAGTGTTTAGTTCACTGCTAATGTCCCGGAAAGGTATTTACCCCACGTAGGCTGAGATGATCATTCTGCGTCATTCTGCTACCCAAGCATAATGTAAGATGAGCAATGTCTGCTGACAAGATAGTTTTTGGTGATGTAGGATTAGCAAAGTATATCTGTTATTGATGAGAATAGATGGGGAGTGTGAGAAATAACCGCGAGAGAGATCAATCAAGATGTTCTGTACTCTGTAAAGAGCTGATTGTGTAATACTGTATACTGTAATTAAAAACGCGTGTTATAACTTACAGTAAAGTTAGAATTTACTTCAGTAAACATTCTTTCTTTGGGCATCCTCTTTTCTATTGTCTATCTGATGTGGTTGATGGATGTGATTGACAATAGATGGGGAGTGAGAGAAATTACCTTGAGAGAGATCAATCAAGATGTTCTGTACTCTGTAAAGAACTGATAGTGTAATACTGTAATTAAAAAGGCGTGCTATAACTTACAGTAAAGTTAGAATTTACTTCAGTGAACATTCTTTCTTTGGGCATCCTATTTTTGATTGTCTATCTGATGTGGTTGCTGGATGTGTTGATTTTTGGAACAGATCAGTTGGAGAGCTCTAACGTGTAATATCGTATACAACTGA

mRNA sequence

ATGTGTCGTGCTTTTCGTGTTGGGACGTATTGCAAAAATACCCTAAATTATTTTATTAAAAAAACAAACAAGGCACTACCATCCTCTGTCTCTCTCTACTTAGCTGTCTGTTGCGCCTCTCTTTCTCTCTCCTTTCCCCCCTCCCTCTCTCTATCTGTCCTACCTGTCTGCGAGTTTCTGCTGCATCGGAAGATCAGTTGGAGAGCTCTAACGTGTAATATCGTATACAACTGA

Coding sequence (CDS)

ATGTGTCGTGCTTTTCGTGTTGGGACGTATTGCAAAAATACCCTAAATTATTTTATTAAAAAAACAAACAAGGCACTACCATCCTCTGTCTCTCTCTACTTAGCTGTCTGTTGCGCCTCTCTTTCTCTCTCCTTTCCCCCCTCCCTCTCTCTATCTGTCCTACCTGTCTGCGAGTTTCTGCTGCATCGGAAGATCAGTTGGAGAGCTCTAACGTGTAATATCGTATACAACTGA

Protein sequence

MCRAFRVGTYCKNTLNYFIKKTNKALPSSVSLYLAVCCASLSLSFPPSLSLSVLPVCEFLLHRKISWRALTCNIVYN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21636.1Spo21636.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo21636.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo21636.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo21636.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo21636.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0007127 meiosis I
biological_process GO:0006979 response to oxidative stress
biological_process GO:0030091 protein repair
biological_process GO:0006464 cellular protein modification process
biological_process GO:0022414 reproductive process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0033043 regulation of organelle organization
biological_process GO:0070647 protein modification by small protein conjugation or removal
biological_process GO:0009791 post-embryonic development
biological_process GO:0006310 DNA recombination
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0003006 developmental process involved in reproduction
biological_process GO:0007059 chromosome segregation
biological_process GO:0051276 chromosome organization
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0009653 anatomical structure morphogenesis
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0007017 microtubule-based process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006621 protein retention in ER lumen
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009414 response to water deprivation
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010114 response to red light
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009657 plastid organization
biological_process GO:0010206 photosystem II repair
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0009987 cellular process
biological_process GO:0008152 metabolic process
biological_process GO:0006457 protein folding
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043090 amino acid import
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0048767 root hair elongation
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0009651 response to salt stress
biological_process GO:0007165 signal transduction
biological_process GO:0042908 xenobiotic transport
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0042398 cellular modified amino acid biosynthetic process
biological_process GO:0007267 cell-cell signaling
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0000105 histidine biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0009658 chloroplast organization
cellular_component GO:0009523 photosystem II
cellular_component GO:0048046 apoplast
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009507 chloroplast
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005777 peroxisome
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005875 microtubule associated complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0031977 thylakoid lumen
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0005179 hormone activity
molecular_function GO:0004424 imidazoleglycerol-phosphate dehydratase activity
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0016829 lyase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0005515 protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0016853 isomerase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046923 ER retention sequence binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0031072 heat shock protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo097690.74Barchart | Table
Spo083510.73Barchart | Table
Spo029180.72Barchart | Table
Spo233320.72Barchart | Table
Spo026650.72Barchart | Table
Spo108350.71Barchart | Table
Spo250080.71Barchart | Table
Spo021060.71Barchart | Table
Spo115240.70Barchart | Table
Spo116880.70Barchart | Table
Spo224510.70Barchart | Table
Spo233820.70Barchart | Table
Spo010540.69Barchart | Table
Spo251960.69Barchart | Table
Spo211550.69Barchart | Table
Spo002560.69Barchart | Table
Spo238530.69Barchart | Table
Spo228110.69Barchart | Table
Spo095540.69Barchart | Table
Spo266100.69Barchart | Table
Spo273640.68Barchart | Table
Spo025730.68Barchart | Table
Spo097980.68Barchart | Table
Spo108640.68Barchart | Table
Spo129540.68Barchart | Table
Spo199380.68Barchart | Table
Spo154610.67Barchart | Table
Spo211440.67Barchart | Table
Spo220040.67Barchart | Table
Spo063350.67Barchart | Table
Spo051250.67Barchart | Table
Spo259850.67Barchart | Table
Spo266970.67Barchart | Table
Spo269750.67Barchart | Table
Spo149140.67Barchart | Table
Spo143540.66Barchart | Table
Spo212150.66Barchart | Table
Spo246230.66Barchart | Table
Spo168010.66Barchart | Table
Spo169960.66Barchart | Table
Spo176120.66Barchart | Table
Spo200500.66Barchart | Table
Spo209120.66Barchart | Table
Spo128430.66Barchart | Table
Spo230760.66Barchart | Table
Spo012520.66Barchart | Table
Spo054020.66Barchart | Table
Spo006770.66Barchart | Table
Spo214460.65Barchart | Table
Spo016280.65Barchart | Table
Spo246750.65Barchart | Table
Spo081140.65Barchart | Table
Spo005260.65Barchart | Table
Spo175780.65Barchart | Table