Spo21430 (gene)

Overview
NameSpo21430
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPlastocyanin A
LocationSpoScf_01077 : 34316 .. 34822 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACCGTCGCTTCCTCCGCTGCCGTAGCCGTCCCCTCCTTTACCGGCCTTAAGGCCTCAGGATCCATCAAGCCTACCACCGCAAAAATCATCCCAACCACCACCGCCGTCCCAAGATTGTCTGTCAAGGCTTCCTTGAAGAATGTCGGAGCCGCCGTGGTAGCAACCGCAGCCGCCGGACTTCTAGCCGGAAACGCCATGGCCGTTGAGGTGTTGCTCGGAGGGGGTGACGGATCATTGGCATTCCTTCCAGGAGACTTCAGCGTAGCCTCGGGCGAGGAGATCGTATTCAAGAACAATGCCGGATTCCCCCACAACGTAGTGTTTGACGAGGACGAGATTCCCTCCGGTGTCGACGCCGCGAAGATTTCGATGTCCGAGGAGGATTTGCTGAATGCACCAGGGGAAACTTACAAAGTTACCCTTACTGAGAAAGGAACTTACAAGTTCTACTGCTCACCCCACCAGGGTGCTGGTATGGTGGGAAAAGTAACTGTCAACTAA

mRNA sequence

ATGGCCACCGTCGCTTCCTCCGCTGCCGTAGCCGTCCCCTCCTTTACCGGCCTTAAGGCCTCAGGATCCATCAAGCCTACCACCGCAAAAATCATCCCAACCACCACCGCCGTCCCAAGATTGTCTGTCAAGGCTTCCTTGAAGAATGTCGGAGCCGCCGTGGTAGCAACCGCAGCCGCCGGACTTCTAGCCGGAAACGCCATGGCCGTTGAGGTGTTGCTCGGAGGGGGTGACGGATCATTGGCATTCCTTCCAGGAGACTTCAGCGTAGCCTCGGGCGAGGAGATCGTATTCAAGAACAATGCCGGATTCCCCCACAACGTAGTGTTTGACGAGGACGAGATTCCCTCCGGTGTCGACGCCGCGAAGATTTCGATGTCCGAGGAGGATTTGCTGAATGCACCAGGGGAAACTTACAAAGTTACCCTTACTGAGAAAGGAACTTACAAGTTCTACTGCTCACCCCACCAGGGTGCTGGTATGGTGGGAAAAGTAACTGTCAACTAA

Coding sequence (CDS)

ATGGCCACCGTCGCTTCCTCCGCTGCCGTAGCCGTCCCCTCCTTTACCGGCCTTAAGGCCTCAGGATCCATCAAGCCTACCACCGCAAAAATCATCCCAACCACCACCGCCGTCCCAAGATTGTCTGTCAAGGCTTCCTTGAAGAATGTCGGAGCCGCCGTGGTAGCAACCGCAGCCGCCGGACTTCTAGCCGGAAACGCCATGGCCGTTGAGGTGTTGCTCGGAGGGGGTGACGGATCATTGGCATTCCTTCCAGGAGACTTCAGCGTAGCCTCGGGCGAGGAGATCGTATTCAAGAACAATGCCGGATTCCCCCACAACGTAGTGTTTGACGAGGACGAGATTCCCTCCGGTGTCGACGCCGCGAAGATTTCGATGTCCGAGGAGGATTTGCTGAATGCACCAGGGGAAACTTACAAAGTTACCCTTACTGAGAAAGGAACTTACAAGTTCTACTGCTCACCCCACCAGGGTGCTGGTATGGTGGGAAAAGTAACTGTCAACTAA

Protein sequence

MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21430.1Spo21430.1mRNA


Homology
[Close]
BLAST of Spo21430.1 vs. NCBI nr
Match: gi|130285|sp|P00289.2|PLAS_SPIOL (RecName: Full=Plastocyanin, chloroplastic; Flags: Precursor)

HSP 1 Score: 312.8 bits (800), Expect = 3.700e-82
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168
[Close]
BLAST of Spo21430.1 vs. NCBI nr
Match: gi|731373750|ref|XP_010666739.1| (PREDICTED: plastocyanin, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 271.6 bits (693), Expect = 9.500e-70
Identity = 143/168 (85.12%), Postives = 153/168 (91.07%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV SSAAVAVPSFTGLKA+G  KPT AK+IPTTTAVPRLSVKASLKNVG AV ATAAA
Sbjct: 1   MATVTSSAAVAVPSFTGLKAAGPAKPTIAKMIPTTTAVPRLSVKASLKNVGVAVAATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           G+LAGNAMA+E+LLGG  G LAF+P DF+VA+GEEIVFKNNAG+PHNVVFDEDEIPSGVD
Sbjct: 61  GILAGNAMAIEILLGGEGGVLAFVPQDFNVAAGEEIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           A KISM EEDLLN PGETYKV LTEKG+YKFYCSPH GAGMVGKVTVN
Sbjct: 121 AGKISMPEEDLLNGPGETYKVVLTEKGSYKFYCSPHAGAGMVGKVTVN 168
[Close]
BLAST of Spo21430.1 vs. NCBI nr
Match: gi|802607282|ref|XP_012073717.1| (PREDICTED: plastocyanin [Jatropha curcas])

HSP 1 Score: 243.0 bits (619), Expect = 3.600e-61
Identity = 132/169 (78.11%), Postives = 145/169 (85.80%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKAS-GSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAA 60
           MA V +SAAV +PSFTGLKA+ G+     A + P    VPRLSVKAS+K+VG AVVATAA
Sbjct: 1   MAAV-TSAAVGIPSFTGLKAANGTTAKVNASVKPAACPVPRLSVKASMKDVGVAVVATAA 60

Query: 61  AGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGV 120
           + +LA NAMAVEVLLGG DGSLAF+P DFSVA GE IVFKNNAGFPHNV+FDEDEIP GV
Sbjct: 61  SAILASNAMAVEVLLGGDDGSLAFVPSDFSVAPGETIVFKNNAGFPHNVIFDEDEIPGGV 120

Query: 121 DAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           DA+KISMSEEDLLNAPGETYKVTLTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 DASKISMSEEDLLNAPGETYKVTLTEKGSYAFYCSPHQGAGMVGKVTVN 168
[Close]
BLAST of Spo21430.1 vs. NCBI nr
Match: gi|130282|sp|P07030.1|PLAS_SILLB (RecName: Full=Plastocyanin, chloroplastic; Flags: Precursor)

HSP 1 Score: 239.6 bits (610), Expect = 4.000e-60
Identity = 125/168 (74.40%), Postives = 139/168 (82.74%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV SSAAVA+PSF GLKAS + +  T K+     A PR+S+KASLK+VG  V ATAAA
Sbjct: 1   MATVTSSAAVAIPSFAGLKASSTTRAATVKV---AVATPRMSIKASLKDVGVVVAATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           G+LAGNAMA EVLLG  DG LAF+P D S+ASGE+I FKNNAGFPHNVVFDEDE+P+GVD
Sbjct: 61  GILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
             KISM EEDLLNAPGE Y VTLTEKGTYKFYC+PH GAGMVGKVTVN
Sbjct: 121 VTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165
[Close]
BLAST of Spo21430.1 vs. NCBI nr
Match: gi|1012203378|ref|XP_015973807.1| (PREDICTED: plastocyanin [Arachis duranensis])

HSP 1 Score: 239.6 bits (610), Expect = 4.000e-60
Identity = 128/170 (75.29%), Postives = 146/170 (85.88%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPT--TAKIIPTTTAVPRLSVKASLKNVGAAVVATA 60
           MAT+ +SAAV +PSFTGLKA+ +   T  +A +  +    PRL VKASLK+VG AVVATA
Sbjct: 1   MATITNSAAVTIPSFTGLKATATNATTKVSAGVKVSAAQFPRLGVKASLKDVGVAVVATA 60

Query: 61  AAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSG 120
           A+ +LA NAMA+EVLLGG DGSLAF+P DFS+A+GE+IVFKNNAGFPHNVVFDEDEIPSG
Sbjct: 61  ASAVLASNAMAIEVLLGGDDGSLAFIPKDFSIAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120

Query: 121 VDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           VDA+KISMSEEDLLNAPGE Y VTL+EKGTY FYCSPHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAPGEVYNVTLSEKGTYSFYCSPHQGAGMVGKVTVN 170
[Close]
BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSA8_SPIOL (Plastocyanin OS=Spinacia oleracea GN=SOVF_153680 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 2.600e-82
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168
[Close]
BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4F7_BETVU (Plastocyanin OS=Beta vulgaris subsp. vulgaris GN=BVRB_004160 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.600e-70
Identity = 143/168 (85.12%), Postives = 153/168 (91.07%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV SSAAVAVPSFTGLKA+G  KPT AK+IPTTTAVPRLSVKASLKNVG AV ATAAA
Sbjct: 1   MATVTSSAAVAVPSFTGLKAAGPAKPTIAKMIPTTTAVPRLSVKASLKNVGVAVAATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           G+LAGNAMA+E+LLGG  G LAF+P DF+VA+GEEIVFKNNAG+PHNVVFDEDEIPSGVD
Sbjct: 61  GILAGNAMAIEILLGGEGGVLAFVPQDFNVAAGEEIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           A KISM EEDLLN PGETYKV LTEKG+YKFYCSPH GAGMVGKVTVN
Sbjct: 121 AGKISMPEEDLLNGPGETYKVVLTEKGSYKFYCSPHAGAGMVGKVTVN 168
[Close]
BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: A0A067KPD8_JATCU (Plastocyanin OS=Jatropha curcas GN=JCGZ_08159 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.500e-61
Identity = 132/169 (78.11%), Postives = 145/169 (85.80%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKAS-GSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAA 60
           MA V +SAAV +PSFTGLKA+ G+     A + P    VPRLSVKAS+K+VG AVVATAA
Sbjct: 1   MAAV-TSAAVGIPSFTGLKAANGTTAKVNASVKPAACPVPRLSVKASMKDVGVAVVATAA 60

Query: 61  AGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGV 120
           + +LA NAMAVEVLLGG DGSLAF+P DFSVA GE IVFKNNAGFPHNV+FDEDEIP GV
Sbjct: 61  SAILASNAMAVEVLLGGDDGSLAFVPSDFSVAPGETIVFKNNAGFPHNVIFDEDEIPGGV 120

Query: 121 DAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           DA+KISMSEEDLLNAPGETYKVTLTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 DASKISMSEEDLLNAPGETYKVTLTEKGSYAFYCSPHQGAGMVGKVTVN 168
[Close]
BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: C6SZV4_SOYBN (Plastocyanin OS=Glycine max PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.500e-58
Identity = 128/168 (76.19%), Postives = 142/168 (84.52%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV +SAAVA+PSFTGLKAS  I     K+  +     RL +KASLK+VG AVVATAA+
Sbjct: 1   MATV-TSAAVAIPSFTGLKASAGIVSAAVKV--SAPQATRLGIKASLKDVGVAVVATAAS 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
            +LA NAMA+EVLLGG DGSLAF+P +FSVASGE+IVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  AVLASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           A KISMS+EDLLNAPGETY VTL  KGTY F+CSPHQGAGMVGKVTVN
Sbjct: 121 AGKISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165
[Close]
BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Match: U5TZM8_PHAVU (Plastocyanin OS=Phaseolus vulgaris GN=PHAVU_009G020300g PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.400e-58
Identity = 125/168 (74.40%), Postives = 141/168 (83.93%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MA V +SAAVA+PSFTGLKASG  K + A +  +    PR  +KASLK++GAAVVATAA+
Sbjct: 1   MAAV-TSAAVAIPSFTGLKASGPTKVSAAAVKVSVPQAPRFGIKASLKDLGAAVVATAAS 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
            +LA NAMA+EVLLG GDGSL F+P +FSV SGE+IVFKNNAGFPHNVVFDEDEIP+GVD
Sbjct: 61  AVLASNAMALEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           A KISM EE+LLNAPGETY VTL  KGTY FYCSPHQGAGMVGKVTVN
Sbjct: 121 AVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 167
[Close]
BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 312.8 bits (800), Expect = 2.300e-84
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168
[Close]
BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS_SILLB (Plastocyanin, chloroplastic OS=Silene latifolia subsp. alba GN=PETE PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.500e-62
Identity = 125/168 (74.40%), Postives = 139/168 (82.74%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MATV SSAAVA+PSF GLKAS + +  T K+     A PR+S+KASLK+VG  V ATAAA
Sbjct: 1   MATVTSSAAVAIPSFAGLKASSTTRAATVKV---AVATPRMSIKASLKDVGVVVAATAAA 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
           G+LAGNAMA EVLLG  DG LAF+P D S+ASGE+I FKNNAGFPHNVVFDEDE+P+GVD
Sbjct: 61  GILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
             KISM EEDLLNAPGE Y VTLTEKGTYKFYC+PH GAGMVGKVTVN
Sbjct: 121 VTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165
[Close]
BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 7.600e-59
Identity = 122/168 (72.62%), Postives = 138/168 (82.14%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MA+V +SA VA+PSFTGLKAS      T +I     A P+L+VK+SLKN G A VA AA+
Sbjct: 1   MASV-TSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAAS 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
             LAGNAMA+EVLLGGGDGSLAF+P DFS+A GE+IVFKNNAG+PHNVVFDEDEIPSGVD
Sbjct: 61  IALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
            AKISM E+DLLN  GETY+V LTE GTY FYC+PHQGAGMVGKVTVN
Sbjct: 121 VAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167
[Close]
BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 9.900e-59
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKA---SGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVAT 60
           MATV +SAAVA+PSFTGLKA   S S   T A        V RL+VKASLK+VGA V AT
Sbjct: 1   MATV-TSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAAT 60

Query: 61  AAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPS 120
           A + +LA NAMA+EVLLGG DGSLAF+PG+FSV++GE+I FKNNAGFPHNVVFDEDEIP+
Sbjct: 61  AVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPA 120

Query: 121 GVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           GVDA+KISMSEEDLLNA GETY VTL+EKGTY FYC+PHQGAGMVGKVTVN
Sbjct: 121 GVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170
[Close]
BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 5.400e-57
Identity = 119/169 (70.41%), Postives = 144/169 (85.21%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKA-SGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAA 60
           MATV +SAAV++PSFTGLKA S S    +A    + + +PRLS+KAS+K+VGAAVVATAA
Sbjct: 1   MATV-TSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAA 60

Query: 61  AGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGV 120
           + ++A NAMA++VLLG  DGSLAF+P +FS++ GE+IVFKNNAGFPHN+VFDED IPSGV
Sbjct: 61  SAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGV 120

Query: 121 DAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
           DA+KISMSEEDLLNA GET++V L+ KG Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 DASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168
[Close]
BLAST of Spo21430.1 vs. TAIR (Arabidopsis)
Match: AT1G20340.1 (Cupredoxin superfamily protein)

HSP 1 Score: 228.0 bits (580), Expect = 4.300e-60
Identity = 122/168 (72.62%), Postives = 138/168 (82.14%), Query Frame = 1 

		  

Query: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60
           MA+V +SA VA+PSFTGLKAS      T +I     A P+L+VK+SLKN G A VA AA+
Sbjct: 1   MASV-TSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAAS 60

Query: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120
             LAGNAMA+EVLLGGGDGSLAF+P DFS+A GE+IVFKNNAG+PHNVVFDEDEIPSGVD
Sbjct: 61  IALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVD 120

Query: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 169
            AKISM E+DLLN  GETY+V LTE GTY FYC+PHQGAGMVGKVTVN
Sbjct: 121 VAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167
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BLAST of Spo21430.1 vs. TAIR (Arabidopsis)
Match: AT1G76100.1 (plastocyanin 1)

HSP 1 Score: 208.8 bits (530), Expect = 2.700e-54
Identity = 113/166 (68.07%), Postives = 134/166 (80.72%), Query Frame = 1 

		  

Query: 6   SSAAVAVPSFTGLKASGSIKPTTAKIIPTTT----AVPRLSVKASLKNVGAAVVATAAAG 65
           +SA V +PSFTGLK + S KP T   I  +T    A P+L++K+SLK+ G   VATAA+ 
Sbjct: 5   TSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASI 64

Query: 66  LLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDA 125
           +LAGNAMA+EVLLG  DGSLAF+P +F+VA GE+IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 65  VLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 124

Query: 126 AKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTV 168
           +KISM E  LLN  GETY+VTLTE G+Y FYC+PHQGAGMVGK+TV
Sbjct: 125 SKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170
The following BLAST results are available for this feature:
BLAST of Spo21430.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|130285|sp|P00289.2|PLAS_SPIOL3.7e-82100.RecName: Full=Plastocyanin, ch... [more]
gi|731373750|ref|XP_010666739.1|9.5e-7085.1PREDICTED: plastocyanin, chlor... [more]
gi|802607282|ref|XP_012073717.1|3.6e-6178.1PREDICTED: plastocyanin [Jatro... [more]
gi|130282|sp|P07030.1|PLAS_SILLB4.0e-6074.4RecName: Full=Plastocyanin, ch... [more]
gi|1012203378|ref|XP_015973807.1|4.0e-6075.2PREDICTED: plastocyanin [Arach... [more]
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BLAST of Spo21430.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSA8_SPIOL2.6e-82100.Plastocyanin OS=Spinacia olera... [more]
A0A0J8B4F7_BETVU6.6e-7085.1Plastocyanin OS=Beta vulgaris ... [more]
A0A067KPD8_JATCU2.5e-6178.1Plastocyanin OS=Jatropha curca... [more]
C6SZV4_SOYBN1.5e-5876.1Plastocyanin OS=Glycine max PE... [more]
U5TZM8_PHAVU3.4e-5874.4Plastocyanin OS=Phaseolus vulg... [more]
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BLAST of Spo21430.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PLAS_SPIOL2.3e-84100.Plastocyanin, chloroplastic OS... [more]
PLAS_SILLB2.5e-6274.4Plastocyanin, chloroplastic OS... [more]
PLAS2_ARATH7.6e-5972.6Plastocyanin major isoform, ch... [more]
PLAS_SOLLC9.9e-5974.2Plastocyanin, chloroplastic OS... [more]
PLAS1_POPNI5.4e-5770.4Plastocyanin A, chloroplastic ... [more]
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BLAST of Spo21430.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G20340.14.3e-6072.6Cupredoxin superfamily protein[more]
AT1G76100.12.7e-5468.0plastocyanin 1[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000923Blue (type 1) copper domainPFAMPF00127Copper-bindcoord: 71..168
score: 8.3
IPR001235Blue (type 1) copper protein, plastocyanin-typePRINTSPR00156COPPERBLUEcoord: 104..119
score: 8.8E-14coord: 145..159
score: 8.8E-14coord: 89..102
score: 8.8
IPR002387PlastocyaninPRINTSPR00157PLASTOCYANINcoord: 98..116
score: 5.0E-33coord: 147..166
score: 5.0E-33coord: 75..94
score: 5.0
IPR002387PlastocyaninTIGRFAMsTIGR02656TIGR02656coord: 70..168
score: 3.8
IPR008972CupredoxinGENE3D2.60.40.420coord: 71..168
score: 1.9
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 67..168
score: 6.41
NoneNo IPR availablePANTHERPTHR34192FAMILY NOT NAMEDcoord: 1..168
score: 1.7
NoneNo IPR availablePANTHERPTHR34192:SF2PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATEDcoord: 1..168
score: 1.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0010581 regulation of starch biosynthetic process
biological_process GO:0010380 regulation of chlorophyll biosynthetic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009932 cell tip growth
biological_process GO:0015813 L-glutamate transmembrane transport
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0016573 histone acetylation
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0019676 ammonia assimilation cycle
biological_process GO:0071423 malate transmembrane transport
biological_process GO:0009987 cellular process
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0006574 valine catabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0019521 D-gluconate metabolic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0015729 oxaloacetate transport
biological_process GO:0009269 response to desiccation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0051788 response to misfolded protein
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006814 sodium ion transport
biological_process GO:0009624 response to nematode
biological_process GO:0008152 metabolic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0009637 response to blue light
biological_process GO:0046686 response to cadmium ion
biological_process GO:0010218 response to far red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0009744 response to sucrose
biological_process GO:0009657 plastid organization
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0048767 root hair elongation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010155 regulation of proton transport
biological_process GO:0017148 negative regulation of translation
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0071555 cell wall organization
biological_process GO:0055070 copper ion homeostasis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0050821 protein stabilization
biological_process GO:0042550 photosystem I stabilization
biological_process GO:0009780 photosynthetic NADP+ reduction
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009773 photosynthetic electron transport in photosystem I
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005773 vacuole
cellular_component GO:0044428 nuclear part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0009295 nucleoid
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005778 peroxisomal membrane
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0030093 chloroplast photosystem I
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
molecular_function GO:0015367 oxoglutarate:malate antiporter activity
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0008442 3-hydroxyisobutyrate dehydrogenase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015131 oxaloacetate transmembrane transporter activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008047 enzyme activator activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0004791 thioredoxin-disulfide reductase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005313 L-glutamate transmembrane transporter activity
molecular_function GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity
RNA-Seq Expression