Spo21391 (gene)

Overview
NameSpo21391
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionChlororespiratory reduction 6
Locationchr6 : 39435762 .. 39438938 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGACCAAATCTAAAATCGAGAATTCATATGAAAAAAAAAAAAAAACATCCAGATCAAAGAATAGCATAGAAAAAAAACCCCAAAAAAAACATCAAACCACAGAAATAGCATCCAGTTCTACGAATCAAAGCATAGTAAAAAAAAATTAAAAAAACACCATATTAGGCAATCTATAGTCGACTTACCGAAATGGAAGGGAAAGAAGAGACCCTCCATGGAAAAGGAGTGAAGACACCATCTAGCTGATAAAAAATTCGCGAATATCTGACCGTTTTCTGAAGAACTGAAACCCTAATTTTGCAGAAACCTTCAGGAATTCATCCCCTAAACCCTAGAAATAGATAGCCCGACTCACATTCAGTAGCAATTGAGGGGAGGGATGCTTCGTTGATGCTTCATCGCCATTGTCATGGTTGAGAATGCGATTTTCAGAGAAAATGAGGAGAGAGAAAAGAGCAAAAAATGCAAACTTGTGAATATGTGATGTGATGTCCCACATGAAATTGAAATTTGAAGGGAAAAAAACAAAAAGAGAATGGGATGACATAATAGAAGATAAAGTAAAAGCAATCGACCAAGCATTTTGTAGGCGCCAAAATCATGGTTGCCTTCACAACAACACCCGCAATTCCAGTTCCAGTTCCAGTTCATCCATCTTCCATTTCTCAACGAAATACTCCTTTAAACTCTAATTCTTGCTGGAAATCAGTATGGTTTCCTCCTTCTTCTTGTTCTTGTTCTTGTCTCTCCATTTTATTAGCCAACAATACGAGAAGAAGCACACTTCACCAATTTATTATACCCAAAGTATCTTTCAACCCACAAGGCAACTATGACCTCTCCCTCCTCAGTGATGATGATCTTCAAGGTGAAATTCAATTATACTATCAAACGTGATTATTGGTTTTTAAATTTTAATTGCGCGAGTTTATTATTAATTGATTCTTTTGTAATTTGGTTTAATTAGCTAAAGCTCCAGAGCCAATGCCCCCAAAACAAGGAAGATATGAGGTCATCATAGATACTGATGCCATTCGACGTCTAGACTTATCTCCCTTCCAATCTGCCACTGCCATTTCCTCATCTTCCTCTGGTAATTTTATTTATTTGTTTTTTAGTAGTACATTTTATATGCGTTTTTTTACTAATTTATTCTTATCGTTGTACTCTCTCTGTATTTGTTTAAGAGATACACTGGTCTTTTCAGGTCATGTTTATTTAAGAGATACACTTGTCATTTTTAGTAACTTATCAACCCCATCATCTAATTAAATAATCTATCTACACCTCATCCCCACCCCCACTCCCTAAAATGACATGGTCCCCACTTGTTTTTCTTATTAAAATATCTACTCCACCCATTTGGTTTATTACTTTATTTCATTCAATTCTTTTTCTTAATACGCGTGCCCGACCAAATATATCCCTTAAATAAATACGGAGGGAGTATTATATTGTTACCAAATATGAAACATGTTAAATTAAATTTTATGACAAAAATCATGCATCATAAGTTCATATTAAATGGTATTACATATTTTTGCTAATCTTAGTTTTAACTAGCTACTAATCCATAATTCAAATCTTATATCGTATTACGTATACACACAATATGCTCAATGTCATACAAAGTACTCCCCCGAGTCCTGTTTTTGAATAAATGCATCTATTAGACTAACACTGTACATACACTTGTTGTCAATTTTCAACTTTAACTATTAATATCTTTAACTATTAATTTTCAACTTCAACTATTAATATCTTTAACTATTAATTTTCAACTTCAACTTCAACTTCAACTTCAACTTATGGGTAAAAGGTTACAAAAAGTTAGTATCATGAAAATGTGACTAATTAAAAAACATATTATATGATAATTATAGTTAATCCGGAGGAGTATCTGGAACGTACAATAGGGTTCACGATAAAGTACAAAAGGGAGGATCCATATGATCAAAGAGAAGTATCAGAATTCCCAGAAATAAGACTTTGGTATGTGAGACTTGATGCCACTTATCCTTGGCTTCCCCTTTTGTTGGATTGGCGTGCTGGTGAACTTGCTCGTTATACTGCCATGCTTGTTCCACACCAGGTAACTTATATAATTTTATCGAGGATACCAATTAAGGACATACTCATAGATAATGTATTATATAGTAGTACTTGTTATCGATTTGGTGATCAATGTTTATTTTGTGTGTGTATGTACTATGTAGATGAGTATGAGAATGGGAGTGGTGTTCAACCCAGAGGCGTTGGAATTGTTCATCATGAATAAGGTGTTCACAATATACCCTTGGTTAAAGCAACAAGGTTTTCCCACTTCAAAGGCTAGATTGAAGACTAATGACATGGCTAGAATGCTTGGTTTTGGAATTGGGGACGAGTTGTTTGACTTGATCGATCAACATCCCGTTTCTTCGCCTACTTAAAATGTGTTGAGGGTAGTGGTTATTCATGAGCCACATTACACATAGTAATGCTCCTTGTTAGGACAATCTATACTATTATTAAAACTCCAAAGCAAACAATGTCATCTCGCCACATGTCGCTTCCTATATAATGATCACATGACGCATAGTCATCTTTGACATGGCAACTCGGTCATAGAACGTACTTTCTTAATCATGAGAAAAAATGGTAGTTATAGGTTCCGAACCTATAACTTCTTATTTGACTCAAAACTGATTATATAATAATCTAATTGATCAATTCTTCTACTATTCGGGGCATCGCCCGGGGCACTAACTAGTTTTTATCATAAAATGAATGAATGAACAAGCTGGGTTGAATGGCTATTTCTTTGTGTGCATTGCTTGCAAATCAGAACTTAGAATGTTCTAAAAATGCTTTCACCCTTCTTTATTCATAACTATATATTCCTATATACATCAACTACTGTACACCAATACCAATGATGTCTTGGCCTAATGGTTAAGATTGAGGGCTTGTGTACAACAGGTCTCAGGTTCGAATCCCTCCGCCCCCATTTGTAATTTATATTGCCCTAATGGCTCATTCGCACCAAAAAAAAAAACAAAAAAACTACTGTACACCAACTGATTAATCTTAAGCGAGTAACTGAGATCGTTCGTTTGCTTTTGAGTTTGGAAATGCACTTGAAAATGAATGTAGGAACTTTGGGTCATATATTCGTGTATCTCATAAATTTGGCC

mRNA sequence

AAGACCAAATCTAAAATCGAGAATTCATATGAAAAAAAAAAAAAAACATCCAGATCAAAGAATAGCATAGAAAAAAAACCCCAAAAAAAACATCAAACCACAGAAATAGCATCCAGTTCTACGAATCAAAGCATAGTAAAAAAAAATTAAAAAAACACCATATTAGGCAATCTATAGTCGACTTACCGAAATGGAAGGGAAAGAAGAGACCCTCCATGGAAAAGGAGTGAAGACACCATCTAGCTGATAAAAAATTCGCGAATATCTGACCGTTTTCTGAAGAACTGAAACCCTAATTTTGCAGAAACCTTCAGGAATTCATCCCCTAAACCCTAGAAATAGATAGCCCGACTCACATTCAGTAGCAATTGAGGGGAGGGATGCTTCGTTGATGCTTCATCGCCATTGTCATGGTTGAGAATGCGATTTTCAGAGAAAATGAGGAGAGAGAAAAGAGCAAAAAATGCAAACTTGTGAATATGTGATGTGATGTCCCACATGAAATTGAAATTTGAAGGGAAAAAAACAAAAAGAGAATGGGATGACATAATAGAAGATAAAGTAAAAGCAATCGACCAAGCATTTTGTAGGCGCCAAAATCATGGTTGCCTTCACAACAACACCCGCAATTCCAGTTCCAGTTCCAGTTCATCCATCTTCCATTTCTCAACGAAATACTCCTTTAAACTCTAATTCTTGCTGGAAATCAGTATGGTTTCCTCCTTCTTCTTGTTCTTGTTCTTGTCTCTCCATTTTATTAGCCAACAATACGAGAAGAAGCACACTTCACCAATTTATTATACCCAAAGTATCTTTCAACCCACAAGGCAACTATGACCTCTCCCTCCTCAGTGATGATGATCTTCAAGCTAAAGCTCCAGAGCCAATGCCCCCAAAACAAGGAAGATATGAGGTCATCATAGATACTGATGCCATTCGACGTCTAGACTTATCTCCCTTCCAATCTGCCACTGCCATTTCCTCATCTTCCTCTGTTAATCCGGAGGAGTATCTGGAACGTACAATAGGGTTCACGATAAAGTACAAAAGGGAGGATCCATATGATCAAAGAGAAGTATCAGAATTCCCAGAAATAAGACTTTGGTATGTGAGACTTGATGCCACTTATCCTTGGCTTCCCCTTTTGTTGGATTGGCGTGCTGGTGAACTTGCTCGTTATACTGCCATGCTTGTTCCACACCAGATGAGTATGAGAATGGGAGTGGTGTTCAACCCAGAGGCGTTGGAATTGTTCATCATGAATAAGGTGTTCACAATATACCCTTGGTTAAAGCAACAAGGTTTTCCCACTTCAAAGGCTAGATTGAAGACTAATGACATGGCTAGAATGCTTGGTTTTGGAATTGGGGACGAGTTGTTTGACTTGATCGATCAACATCCCGTTTCTTCGCCTACTTAAAATGTGTTGAGGGTAGTGGTTATTCATGAGCCACATTACACATAGTAATGCTCCTTGTTAGGACAATCTATACTATTATTAAAACTCCAAAGCAAACAATGTCATCTCGCCACATGTCGCTTCCTATATAATGATCACATGACGCATAGTCATCTTTGACATGGCAACTCGGTCATAGAACGTACTTTCTTAATCATGAGAAAAAATGGTAGTTATAGGTTCCGAACCTATAACTTCTTATTTGACTCAAAACTGATTATATAATAATCTAATTGATCAATTCTTCTACTATTCGGGGCATCGCCCGGGGCACTAACTAGTTTTTATCATAAAATGAATGAATGAACAAGCTGGGTTGAATGGCTATTTCTTTGTGTGCATTGCTTGCAAATCAGAACTTAGAATGTTCTAAAAATGCTTTCACCCTTCTTTATTCATAACTATATATTCCTATATACATCAACTACTGTACACCAATACCAATGATGTCTTGGCCTAATGGTTAAGATTGAGGGCTTGTGTACAACAGGTCTCAGGTTCGAATCCCTCCGCCCCCATTTGTAATTTATATTGCCCTAATGGCTCATTCGCACCAAAAAAAAAAACAAAAAAACTACTGTACACCAACTGATTAATCTTAAGCGAGTAACTGAGATCGTTCGTTTGCTTTTGAGTTTGGAAATGCACTTGAAAATGAATGTAGGAACTTTGGGTCATATATTCGTGTATCTCATAAATTTGGCC

Coding sequence (CDS)

ATGGTTGCCTTCACAACAACACCCGCAATTCCAGTTCCAGTTCCAGTTCATCCATCTTCCATTTCTCAACGAAATACTCCTTTAAACTCTAATTCTTGCTGGAAATCAGTATGGTTTCCTCCTTCTTCTTGTTCTTGTTCTTGTCTCTCCATTTTATTAGCCAACAATACGAGAAGAAGCACACTTCACCAATTTATTATACCCAAAGTATCTTTCAACCCACAAGGCAACTATGACCTCTCCCTCCTCAGTGATGATGATCTTCAAGCTAAAGCTCCAGAGCCAATGCCCCCAAAACAAGGAAGATATGAGGTCATCATAGATACTGATGCCATTCGACGTCTAGACTTATCTCCCTTCCAATCTGCCACTGCCATTTCCTCATCTTCCTCTGTTAATCCGGAGGAGTATCTGGAACGTACAATAGGGTTCACGATAAAGTACAAAAGGGAGGATCCATATGATCAAAGAGAAGTATCAGAATTCCCAGAAATAAGACTTTGGTATGTGAGACTTGATGCCACTTATCCTTGGCTTCCCCTTTTGTTGGATTGGCGTGCTGGTGAACTTGCTCGTTATACTGCCATGCTTGTTCCACACCAGATGAGTATGAGAATGGGAGTGGTGTTCAACCCAGAGGCGTTGGAATTGTTCATCATGAATAAGGTGTTCACAATATACCCTTGGTTAAAGCAACAAGGTTTTCCCACTTCAAAGGCTAGATTGAAGACTAATGACATGGCTAGAATGCTTGGTTTTGGAATTGGGGACGAGTTGTTTGACTTGATCGATCAACATCCCGTTTCTTCGCCTACTTAA

Protein sequence

MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRSTLHQFIIPKVSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPLLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKARLKTNDMARMLGFGIGDELFDLIDQHPVSSPT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21391.1Spo21391.1mRNA


Homology
[Close]
BLAST of Spo21391.1 vs. NCBI nr
Match: gi|902186283|gb|KNA10656.1| (hypothetical protein SOVF_142360 [Spinacia oleracea])

HSP 1 Score: 559.3 bits (1440), Expect = 3.700e-156
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1 

		  

Query: 1   MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRS 60
           MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRS
Sbjct: 1   MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRS 60

Query: 61  TLHQFIIPKVSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPF 120
           TLHQFIIPKVSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPF
Sbjct: 61  TLHQFIIPKVSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPF 120

Query: 121 QSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLP 180
           QSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLP
Sbjct: 121 QSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLP 180

Query: 181 LLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKA 240
           LLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKA
Sbjct: 181 LLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKA 240

Query: 241 RLKTNDMARMLGFGIGDELFDLIDQHPVSSPT 273
           RLKTNDMARMLGFGIGDELFDLIDQHPVSSPT
Sbjct: 241 RLKTNDMARMLGFGIGDELFDLIDQHPVSSPT 272
[Close]
BLAST of Spo21391.1 vs. NCBI nr
Match: gi|731352889|ref|XP_010687776.1| (PREDICTED: uncharacterized protein LOC104901846 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 368.2 bits (944), Expect = 1.200e-98
Identity = 197/276 (71.38%), Postives = 220/276 (79.71%), Query Frame = 1 

		  

Query: 1   MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLAN--NTR 60
           MVA TTTP  P+P P   S I ++    N NSC K +    +S  CS  S  ++N  N R
Sbjct: 1   MVA-TTTPTSPLP-PSSSSIIIKQTPSSNLNSCCKLLCISTTSPFCSP-SKFISNFPNNR 60

Query: 61  RSTLHQFIIPKVSFNPQGNYDLSLLSDD-DLQA--KAPEPMPPKQGRYEVIIDTDAIRRL 120
           +S  HQF  PKV+FNPQGNYDLSLL DD DLQ   KAPEP+PPK+GR+EV+I+ DAIR L
Sbjct: 61  KSIQHQFT-PKVAFNPQGNYDLSLLDDDNDLQGSTKAPEPLPPKEGRFEVVINNDAIRCL 120

Query: 121 DLSPFQSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDAT 180
           DLSPFQSATAISSSS V+ EEY+ER+IGFTI YKREDPYD RE+SE P++RLW+VRLDA 
Sbjct: 121 DLSPFQSATAISSSSFVDLEEYMERSIGFTINYKREDPYDHRELSELPDVRLWFVRLDAM 180

Query: 181 YPWLPLLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGF 240
           YPWLP+LLDWRAGELARY AMLVPHQMSMRMGVVFNPEALELFIM KVF IY WLKQQG 
Sbjct: 181 YPWLPVLLDWRAGELARYAAMLVPHQMSMRMGVVFNPEALELFIMKKVFIIYSWLKQQGI 240

Query: 241 PTSKARLKTNDMARMLGFGIGDELFDLIDQHPVSSP 272
           PT KARLKT DMARMLGFGIGDELFDLIDQH +  P
Sbjct: 241 PTPKARLKTGDMARMLGFGIGDELFDLIDQHSLPLP 272
[Close]
BLAST of Spo21391.1 vs. NCBI nr
Match: gi|590578938|ref|XP_007013648.1| (Chlororespiratory reduction 6 [Theobroma cacao])

HSP 1 Score: 325.5 bits (833), Expect = 9.000e-86
Identity = 167/256 (65.23%), Postives = 196/256 (76.56%), Query Frame = 1 

		  

Query: 15  PVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRSTLHQFIIPKVSFNP 74
           P+ P S S ++T + S++ W S    P S S + L+I     TR S     +   VSFNP
Sbjct: 7   PLLPLSPSLKHTIIPSSTPWISC--KPISGSVAALTI-----TRFSRQRGQVAVSVSFNP 66

Query: 75  QGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQSATAISSSSSVNP 134
            GN+DLSL  D+D   +   P+PP +GR++V+ID DAIRRLDLSPFQ AT I+S SS   
Sbjct: 67  SGNFDLSLYGDEDDSPQVEPPLPPSEGRFDVVIDNDAIRRLDLSPFQIATGITSPSSAEA 126

Query: 135 EEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPLLLDWRAGELARYT 194
           +E+LERTIGFTI Y R+DP+D RE+SEFP+IRLW+VRLDATYPWLP+LLDWRAGELARY 
Sbjct: 127 KEFLERTIGFTINYTRDDPHDPRELSEFPDIRLWFVRLDATYPWLPVLLDWRAGELARYA 186

Query: 195 AMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKARLKTNDMARMLGFG 254
           AMLVPHQMSMRMGVVFNPEALELFIM KVF +Y WLKQQG P  K RLKT+DMARMLGFG
Sbjct: 187 AMLVPHQMSMRMGVVFNPEALELFIMKKVFIVYAWLKQQGIP--KPRLKTSDMARMLGFG 246

Query: 255 IGDELFDLIDQHPVSS 271
           IGDELFDLIDQH + S
Sbjct: 247 IGDELFDLIDQHALDS 253
[Close]
BLAST of Spo21391.1 vs. NCBI nr
Match: gi|823225688|ref|XP_012445652.1| (PREDICTED: uncharacterized protein LOC105769514 [Gossypium raimondii])

HSP 1 Score: 323.9 bits (829), Expect = 2.600e-85
Identity = 172/255 (67.45%), Postives = 195/255 (76.47%), Query Frame = 1 

		  

Query: 14  VPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRSTLHQFIIPKVSFN 73
           +P+ PS     N P  S+S W S  F P S     L I  ++ TR+    QF  P VSFN
Sbjct: 9   LPLSPSLKHNINNP--SSSPWIS--FKPISALMPNLPI--SHFTRQRG--QFA-PSVSFN 68

Query: 74  PQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQSATAISSSSSVN 133
           P GN+DLSL  D+D  ++A  PMPP +GR EVIID D IRRLDLSPFQSAT I+S  S  
Sbjct: 69  PSGNFDLSLYGDEDDSSQAEPPMPPSEGRLEVIIDNDVIRRLDLSPFQSATGITSPLSAE 128

Query: 134 PEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPLLLDWRAGELARY 193
           P+EYLE+TIGFTI Y R+DP+D RE+SEFP+IRLW+VRLDA YPWLP+LLDWRAGELARY
Sbjct: 129 PKEYLEKTIGFTINYTRDDPHDPRELSEFPDIRLWFVRLDAVYPWLPVLLDWRAGELARY 188

Query: 194 TAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKARLKTNDMARMLGF 253
            AMLVPHQMSMRMGVVFNPEALELFIM KVF +Y WLKQQG P  K RLKT+DMARMLGF
Sbjct: 189 AAMLVPHQMSMRMGVVFNPEALELFIMKKVFVVYSWLKQQGIP--KPRLKTSDMARMLGF 248

Query: 254 GIGDELFDLIDQHPV 269
           GIGDELFDLIDQ P+
Sbjct: 249 GIGDELFDLIDQQPL 252
[Close]
BLAST of Spo21391.1 vs. NCBI nr
Match: gi|147822285|emb|CAN72910.1| (hypothetical protein VITISV_018847 [Vitis vinifera])

HSP 1 Score: 318.9 bits (816), Expect = 8.400e-84
Identity = 162/256 (63.28%), Postives = 189/256 (73.83%), Query Frame = 1 

		  

Query: 14  VPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRSTLHQFIIPKVSFN 73
           +P+ PS   +   P  S S W  +   P+  S   LS    N      L + +   V+FN
Sbjct: 8   LPLSPSPSLKXXIPSPSPSPW--IXCKPTFDSTVSLSXSHLNR-----LPRLVAVSVAFN 67

Query: 74  PQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQSATAISSSSSVN 133
           P GN+DLS+  D+D   K   PMPP +GR EV ID D IRRLDLSPF +AT I+S SS  
Sbjct: 68  PSGNFDLSJYDDEDDSTKVSPPMPPXEGRIEVXIDNDVIRRLDLSPFHTATGITSPSSAE 127

Query: 134 PEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPLLLDWRAGELARY 193
           P+E+LERTIGFTI Y REDP+D RE+SEFP+IRLW+VRLDATYPWLP++LDWRAGELARY
Sbjct: 128 PKEFLERTIGFTINYTREDPHDPRELSEFPDIRLWFVRLDATYPWLPVVLDWRAGELARY 187

Query: 194 TAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKARLKTNDMARMLGF 253
           TAMLVPHQM+MRMGVVFNPEALELFIM KVF +Y WLKQ   P  K RLKT+DMARMLGF
Sbjct: 188 TAMLVPHQMNMRMGVVFNPEALELFIMKKVFVVYSWLKQHKIP--KPRLKTSDMARMLGF 247

Query: 254 GIGDELFDLIDQHPVS 270
           GIGDELFDLIDQHP++
Sbjct: 248 GIGDELFDLIDQHPLA 254
[Close]
BLAST of Spo21391.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVY8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142360 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 2.600e-156
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1 

		  

Query: 1   MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRS 60
           MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRS
Sbjct: 1   MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRS 60

Query: 61  TLHQFIIPKVSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPF 120
           TLHQFIIPKVSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPF
Sbjct: 61  TLHQFIIPKVSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPF 120

Query: 121 QSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLP 180
           QSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLP
Sbjct: 121 QSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLP 180

Query: 181 LLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKA 240
           LLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKA
Sbjct: 181 LLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKA 240

Query: 241 RLKTNDMARMLGFGIGDELFDLIDQHPVSSPT 273
           RLKTNDMARMLGFGIGDELFDLIDQHPVSSPT
Sbjct: 241 RLKTNDMARMLGFGIGDELFDLIDQHPVSSPT 272
[Close]
BLAST of Spo21391.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BQZ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g192850 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 8.400e-99
Identity = 197/276 (71.38%), Postives = 220/276 (79.71%), Query Frame = 1 

		  

Query: 1   MVAFTTTPAIPVPVPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLAN--NTR 60
           MVA TTTP  P+P P   S I ++    N NSC K +    +S  CS  S  ++N  N R
Sbjct: 1   MVA-TTTPTSPLP-PSSSSIIIKQTPSSNLNSCCKLLCISTTSPFCSP-SKFISNFPNNR 60

Query: 61  RSTLHQFIIPKVSFNPQGNYDLSLLSDD-DLQA--KAPEPMPPKQGRYEVIIDTDAIRRL 120
           +S  HQF  PKV+FNPQGNYDLSLL DD DLQ   KAPEP+PPK+GR+EV+I+ DAIR L
Sbjct: 61  KSIQHQFT-PKVAFNPQGNYDLSLLDDDNDLQGSTKAPEPLPPKEGRFEVVINNDAIRCL 120

Query: 121 DLSPFQSATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDAT 180
           DLSPFQSATAISSSS V+ EEY+ER+IGFTI YKREDPYD RE+SE P++RLW+VRLDA 
Sbjct: 121 DLSPFQSATAISSSSFVDLEEYMERSIGFTINYKREDPYDHRELSELPDVRLWFVRLDAM 180

Query: 181 YPWLPLLLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGF 240
           YPWLP+LLDWRAGELARY AMLVPHQMSMRMGVVFNPEALELFIM KVF IY WLKQQG 
Sbjct: 181 YPWLPVLLDWRAGELARYAAMLVPHQMSMRMGVVFNPEALELFIMKKVFIIYSWLKQQGI 240

Query: 241 PTSKARLKTNDMARMLGFGIGDELFDLIDQHPVSSP 272
           PT KARLKT DMARMLGFGIGDELFDLIDQH +  P
Sbjct: 241 PTPKARLKTGDMARMLGFGIGDELFDLIDQHSLPLP 272
[Close]
BLAST of Spo21391.1 vs. UniProtKB/TrEMBL
Match: A0A061GQ49_THECC (Chlororespiratory reduction 6 OS=Theobroma cacao GN=TCM_038239 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.300e-86
Identity = 167/256 (65.23%), Postives = 196/256 (76.56%), Query Frame = 1 

		  

Query: 15  PVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRSTLHQFIIPKVSFNP 74
           P+ P S S ++T + S++ W S    P S S + L+I     TR S     +   VSFNP
Sbjct: 7   PLLPLSPSLKHTIIPSSTPWISC--KPISGSVAALTI-----TRFSRQRGQVAVSVSFNP 66

Query: 75  QGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQSATAISSSSSVNP 134
            GN+DLSL  D+D   +   P+PP +GR++V+ID DAIRRLDLSPFQ AT I+S SS   
Sbjct: 67  SGNFDLSLYGDEDDSPQVEPPLPPSEGRFDVVIDNDAIRRLDLSPFQIATGITSPSSAEA 126

Query: 135 EEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPLLLDWRAGELARYT 194
           +E+LERTIGFTI Y R+DP+D RE+SEFP+IRLW+VRLDATYPWLP+LLDWRAGELARY 
Sbjct: 127 KEFLERTIGFTINYTRDDPHDPRELSEFPDIRLWFVRLDATYPWLPVLLDWRAGELARYA 186

Query: 195 AMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKARLKTNDMARMLGFG 254
           AMLVPHQMSMRMGVVFNPEALELFIM KVF +Y WLKQQG P  K RLKT+DMARMLGFG
Sbjct: 187 AMLVPHQMSMRMGVVFNPEALELFIMKKVFIVYAWLKQQGIP--KPRLKTSDMARMLGFG 246

Query: 255 IGDELFDLIDQHPVSS 271
           IGDELFDLIDQH + S
Sbjct: 247 IGDELFDLIDQHALDS 253
[Close]
BLAST of Spo21391.1 vs. UniProtKB/TrEMBL
Match: A0A0D2Q6R3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G013300 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.800e-85
Identity = 172/255 (67.45%), Postives = 195/255 (76.47%), Query Frame = 1 

		  

Query: 14  VPVHPSSISQRNTPLNSNSCWKSVWFPPSSCSCSCLSILLANNTRRSTLHQFIIPKVSFN 73
           +P+ PS     N P  S+S W S  F P S     L I  ++ TR+    QF  P VSFN
Sbjct: 9   LPLSPSLKHNINNP--SSSPWIS--FKPISALMPNLPI--SHFTRQRG--QFA-PSVSFN 68

Query: 74  PQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQSATAISSSSSVN 133
           P GN+DLSL  D+D  ++A  PMPP +GR EVIID D IRRLDLSPFQSAT I+S  S  
Sbjct: 69  PSGNFDLSLYGDEDDSSQAEPPMPPSEGRLEVIIDNDVIRRLDLSPFQSATGITSPLSAE 128

Query: 134 PEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPLLLDWRAGELARY 193
           P+EYLE+TIGFTI Y R+DP+D RE+SEFP+IRLW+VRLDA YPWLP+LLDWRAGELARY
Sbjct: 129 PKEYLEKTIGFTINYTRDDPHDPRELSEFPDIRLWFVRLDAVYPWLPVLLDWRAGELARY 188

Query: 194 TAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKARLKTNDMARMLGF 253
            AMLVPHQMSMRMGVVFNPEALELFIM KVF +Y WLKQQG P  K RLKT+DMARMLGF
Sbjct: 189 AAMLVPHQMSMRMGVVFNPEALELFIMKKVFVVYSWLKQQGIP--KPRLKTSDMARMLGF 248

Query: 254 GIGDELFDLIDQHPV 269
           GIGDELFDLIDQ P+
Sbjct: 249 GIGDELFDLIDQQPL 252
[Close]
BLAST of Spo21391.1 vs. UniProtKB/TrEMBL
Match: D7T4Z8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00630 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.900e-84
Identity = 150/208 (72.12%), Postives = 173/208 (83.17%), Query Frame = 1 

		  

Query: 62  LHQFIIPKVSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQ 121
           L + +   V+FNP GN+DLS+  D+D   K   PMPP +GR EV+ID D IRRLDLSPF 
Sbjct: 7   LPRLVAVSVAFNPSGNFDLSIYDDEDDSTKVSPPMPPTEGRIEVVIDNDVIRRLDLSPFH 66

Query: 122 SATAISSSSSVNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPL 181
           +AT I+S SS  P+E+LERTIGFTI Y REDP+D RE+SEFP+IRLW+VRLDATYPWLP+
Sbjct: 67  TATGITSPSSAEPKEFLERTIGFTINYTREDPHDPRELSEFPDIRLWFVRLDATYPWLPV 126

Query: 182 LLDWRAGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKAR 241
           +LDWRAGELARYTAMLVPHQM+MRMGVVFNPEALELFIM KVF +Y WLKQ   P  K R
Sbjct: 127 VLDWRAGELARYTAMLVPHQMNMRMGVVFNPEALELFIMKKVFVVYSWLKQHKIP--KPR 186

Query: 242 LKTNDMARMLGFGIGDELFDLIDQHPVS 270
           LKT+DMARMLGFGIGDELFDLIDQHP++
Sbjct: 187 LKTSDMARMLGFGIGDELFDLIDQHPLA 212
[Close]
BLAST of Spo21391.1 vs. ExPASy Swiss-Prot
Match: CRR6_ARATH (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana GN=CRR6 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.200e-79
Identity = 141/200 (70.50%), Postives = 161/200 (80.50%), Query Frame = 1 

		  

Query: 70  VSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQSATAISSS 129
           V+FNP GN+D+S   +D    K   PMPP  GRYEV+ID D+I RLDLSPFQ A  I+S 
Sbjct: 48  VAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSP 107

Query: 130 SS---VNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPLLLDWR 189
                  P+ YL+RTIGFTI YKREDP D RE+SE+P++RLW+VRLDA YPWLPLLLDWR
Sbjct: 108 DDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWR 167

Query: 190 AGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKARLKTND 249
           AGELARY AMLVPHQMS+RMGVVFNPEALELF+MNKVF +YPWLK+ G P  K RLKT+D
Sbjct: 168 AGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVP--KPRLKTSD 227

Query: 250 MARMLGFGIGDELFDLIDQH 267
           MARMLGFGIGDELFDLID +
Sbjct: 228 MARMLGFGIGDELFDLIDHN 245
[Close]
BLAST of Spo21391.1 vs. TAIR (Arabidopsis)
Match: AT2G47910.1 (chlororespiratory reduction 6)

HSP 1 Score: 295.4 bits (755), Expect = 3.500e-80
Identity = 141/200 (70.50%), Postives = 161/200 (80.50%), Query Frame = 1 

		  

Query: 70  VSFNPQGNYDLSLLSDDDLQAKAPEPMPPKQGRYEVIIDTDAIRRLDLSPFQSATAISSS 129
           V+FNP GN+D+S   +D    K   PMPP  GRYEV+ID D+I RLDLSPFQ A  I+S 
Sbjct: 48  VAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSP 107

Query: 130 SS---VNPEEYLERTIGFTIKYKREDPYDQREVSEFPEIRLWYVRLDATYPWLPLLLDWR 189
                  P+ YL+RTIGFTI YKREDP D RE+SE+P++RLW+VRLDA YPWLPLLLDWR
Sbjct: 108 DDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWR 167

Query: 190 AGELARYTAMLVPHQMSMRMGVVFNPEALELFIMNKVFTIYPWLKQQGFPTSKARLKTND 249
           AGELARY AMLVPHQMS+RMGVVFNPEALELF+MNKVF +YPWLK+ G P  K RLKT+D
Sbjct: 168 AGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVP--KPRLKTSD 227

Query: 250 MARMLGFGIGDELFDLIDQH 267
           MARMLGFGIGDELFDLID +
Sbjct: 228 MARMLGFGIGDELFDLIDHN 245
The following BLAST results are available for this feature:
BLAST of Spo21391.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902186283|gb|KNA10656.1|3.7e-156100.hypothetical protein SOVF_1423... [more]
gi|731352889|ref|XP_010687776.1|1.2e-9871.3PREDICTED: uncharacterized pro... [more]
gi|590578938|ref|XP_007013648.1|9.0e-8665.2Chlororespiratory reduction 6 ... [more]
gi|823225688|ref|XP_012445652.1|2.6e-8567.4PREDICTED: uncharacterized pro... [more]
gi|147822285|emb|CAN72910.1|8.4e-8463.2hypothetical protein VITISV_01... [more]
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BLAST of Spo21391.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QVY8_SPIOL2.6e-156100.Uncharacterized protein OS=Spi... [more]
A0A0J8BQZ8_BETVU8.4e-9971.3Uncharacterized protein OS=Bet... [more]
A0A061GQ49_THECC6.3e-8665.2Chlororespiratory reduction 6 ... [more]
A0A0D2Q6R3_GOSRA1.8e-8567.4Uncharacterized protein OS=Gos... [more]
D7T4Z8_VITVI5.9e-8472.1Putative uncharacterized prote... [more]
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BLAST of Spo21391.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CRR6_ARATH6.2e-7970.5Protein CHLORORESPIRATORY REDU... [more]
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BLAST of Spo21391.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G47910.13.5e-8070.5chlororespiratory reduction 6[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014946Protein chlororespiratory reduction 6PFAMPF08847DUF1817coord: 107..262
score: 8.2
NoneNo IPR availablePANTHERPTHR35724FAMILY NOT NAMEDcoord: 51..271
score: 6.9E
NoneNo IPR availablePANTHERPTHR35724:SF1SUBFAMILY NOT NAMEDcoord: 51..271
score: 6.9E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0016556 mRNA modification
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0015031 protein transport
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0016043 cellular component organization
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0000023 maltose metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009658 chloroplast organization
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0034051 negative regulation of plant-type hypersensitive response
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010207 photosystem II assembly
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0010275 NAD(P)H dehydrogenase complex assembly
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0045038 protein import into chloroplast thylakoid membrane
biological_process GO:0009306 protein secretion
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0043953 protein transport by the Tat complex
biological_process GO:0009735 response to cytokinin
biological_process GO:0044237 cellular metabolic process
biological_process GO:0006457 protein folding
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009902 chloroplast relocation
cellular_component GO:0009579 thylakoid
cellular_component GO:0044434 chloroplast part
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0033281 TAT protein transport complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009523 photosystem II
cellular_component GO:0009782 photosystem I antenna complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009295 nucleoid
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0031409 pigment binding
molecular_function GO:0047134 protein-disulfide reductase activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005515 protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function GO:0009977 proton motive force dependent protein transmembrane transporter activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
RNA-Seq Expression