Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAAAGGTTTAATCCTCTCTTGGTAATATATTTCCTATTTCTGCATTAAAAAAAAAAAAAATTCTTATTTAATGCGGTAAAAGAAAAAATGAACCCAACCAAACCAAAAATTATTCTCTTCCCCTGAAATCCATCTCAGATTCATCCAATGGCCTTCCATCACCCTCACCACCACCAGCAAAACCTCCACACCACCGCTGCTTCCTATTGCTGCTGCCAACTACCACCTCCACCCTCTTGCCACCATTTACCACCATTATCACCTCCAACCACCGATCCATTTCATGTCGCAGCCATTGTTTCTCAACTTCTCCAATCCCAAAACCACCAAAATCTCCAATCCCAAAACCACCAAAATCTCCACCCCAAAAACCACCAAAATCAAAGACCGGCGCATCAAGAGAATCCGTTTATTTTCTCTCTCCTCCAAAGAATCGATGCCCTTGAATCCTCCCTTCAGAAATACTCAACTTCTGGTTTTTCCTTGAGAGATGCTGCTGCTCGAATAATTCAAGCCCATTTTAGGGCTTATCTTGTTCATAGATCAAGGACTCTTCGTCAGCTCAAAGACCTAGCTTCCATTAAATCCGCTCTTGCTACTTTTAAGTCTTCAATTTCTCGTCAAGCTTTTGTTGATTTTGATTCTCTCTCTCATAATGCTATGGATTTGCTCCATAAACTTGAGTCTATTCAGGTAATTTTCTGCTTTGCCTGCAATTCTGTTTATCAATTTTTATGTTCTTAAATTAAGTTTGGTTATCTGCGTTTTTGAAATTTGTATTTTTGAATTCTGGGTCTGTGAGATTTTGCGTTTTTACTGATAGGTTTTTTAAAATTTTGAATTCTGGTTTTTTTTTTTATATATTTGAATCCAGGTTTTTTGATATTTTGCATTTTGACTTCTGGGTTTTTGATAGTATTTTGCAATTTGAATTATGGGTTTTTGATAGTTTGCATTTTTTTAATTTGTGATTTGTGATATGTTGCATTTTTTAATTCTGAGTATTTGATGTTTTGCATTTTTGATTTCTGGGTATTTGATGTTTTGCAATTTTGAATTCTGGGTTTTGTGTGTGTAGAGTGGTGATAAGATGATTAGAGACAGTAAGAGGACAGTTACTAGAGAGATTGTTGAATTTTTAGAATTAGTTGATGGGTTTTGTGCGAAGAGGCGTCAAGTTCTAACCATGAAGATCAAGAGCATGAGGTTGGCGAGGAATGATAATATAGCTGCTCGTGATACTAAGGAGTTTTCAGGGCATAATGTGGGTTCGAAAACTCGAACTGTAGACAATAAAGAGAAGAAATTAATGGCAAATTTGAGGGAAAGAGTTGAAAATATTGGTAGGATGGCGAAAGCGCTTGAGGAGCAGGAGCAGGAAGCATTTGGAGATGCTGATATCGACGAATTTAAGCATGTTGATGATGAGGATGATGATCTACTTGGTCAAATAGCTAGCAATTATAGATTGAAAAATGGATTAAATGTAAAGCAACATGCTCAGAGCTCGAATGCCAGAAAACGTGTTTGTTTTGTAGAGGATGGAAACTTGATTAGGTTATATGATACTGATGGGGACTCCTCCAGAAGTACTTCTCGGCTGGTTGATGTGATTGAAGATTCTACTAAAGGAACACACGACGAAGAAGAAGCACAAAGCGATGTCGAAGGGTCCTCACAAAGCAGTGAAGAGTTGAGGAAATTTAGAAGTGATGAAGTCAGTGAAGAGTGTGAGAACCAAGATGAGTTCACATTTTCCACTACTCCAGAACCTGCAAAGATGGAACCCAGAGTGGATTTCATGTCAAGGAAACCTGGTGTAAAAATAGTTTGATAAAGAAATGAGTTTGGCATTCTCCTTCAGATTGTTTGCAACTTTGCAATAGACATTCTTTTTTCCGGATTTGGAATTCTTATGTATTTTAGCTTGTAGGTGGAATTGACTTGTCGTGAATTAGAATGTGTTTTTTTTGTTGCTATTATGATGTAGTATCATTTAGCTTTCCTGTATTGAAAGATTGTAATGTGTGCGTAGATTTCTAATCTAATTCTTAAAGACTTCTTCATGTCCATTAGTTATTCTTTTCTCATTGATGATGATCCCAGAATGGTTGAATTCTGGTGAAATTTCTTGTACTTGTCAACTTGTGTAAGCTGGGCTGAGAATCAGTTCATTACATTGCTCAGTAAATTGAAG TATAAAGGTTTAATCCTCTCTTGGTAATATATTTCCTATTTCTGCATTAAAAAAAAAAAAAATTCTTATTTAATGCGGTAAAAGAAAAAATGAACCCAACCAAACCAAAAATTATTCTCTTCCCCTGAAATCCATCTCAGATTCATCCAATGGCCTTCCATCACCCTCACCACCACCAGCAAAACCTCCACACCACCGCTGCTTCCTATTGCTGCTGCCAACTACCACCTCCACCCTCTTGCCACCATTTACCACCATTATCACCTCCAACCACCGATCCATTTCATGTCGCAGCCATTGTTTCTCAACTTCTCCAATCCCAAAACCACCAAAATCTCCAATCCCAAAACCACCAAAATCTCCACCCCAAAAACCACCAAAATCAAAGACCGGCGCATCAAGAGAATCCGTTTATTTTCTCTCTCCTCCAAAGAATCGATGCCCTTGAATCCTCCCTTCAGAAATACTCAACTTCTGGTTTTTCCTTGAGAGATGCTGCTGCTCGAATAATTCAAGCCCATTTTAGGGCTTATCTTGTTCATAGATCAAGGACTCTTCGTCAGCTCAAAGACCTAGCTTCCATTAAATCCGCTCTTGCTACTTTTAAGTCTTCAATTTCTCGTCAAGCTTTTGTTGATTTTGATTCTCTCTCTCATAATGCTATGGATTTGCTCCATAAACTTGAGTCTATTCAGAGTGGTGATAAGATGATTAGAGACAGTAAGAGGACAGTTACTAGAGAGATTGTTGAATTTTTAGAATTAGTTGATGGGTTTTGTGCGAAGAGGCGTCAAGTTCTAACCATGAAGATCAAGAGCATGAGGTTGGCGAGGAATGATAATATAGCTGCTCGTGATACTAAGGAGTTTTCAGGGCATAATGTGGGTTCGAAAACTCGAACTGTAGACAATAAAGAGAAGAAATTAATGGCAAATTTGAGGGAAAGAGTTGAAAATATTGGTAGGATGGCGAAAGCGCTTGAGGAGCAGGAGCAGGAAGCATTTGGAGATGCTGATATCGACGAATTTAAGCATGTTGATGATGAGGATGATGATCTACTTGGTCAAATAGCTAGCAATTATAGATTGAAAAATGGATTAAATGTAAAGCAACATGCTCAGAGCTCGAATGCCAGAAAACGTGTTTGTTTTGTAGAGGATGGAAACTTGATTAGGTTATATGATACTGATGGGGACTCCTCCAGAAGTACTTCTCGGCTGGTTGATGTGATTGAAGATTCTACTAAAGGAACACACGACGAAGAAGAAGCACAAAGCGATGTCGAAGGGTCCTCACAAAGCAGTGAAGAGTTGAGGAAATTTAGAAGTGATGAAGTCAGTGAAGAGTGTGAGAACCAAGATGAGTTCACATTTTCCACTACTCCAGAACCTGCAAAGATGGAACCCAGAGTGGATTTCATGTCAAGGAAACCTGGTGTAAAAATAGTTTGATAAAGAAATGAGTTTGGCATTCTCCTTCAGATTGTTTGCAACTTTGCAATAGACATTCTTTTTTCCGGATTTGGAATTCTTATGTATTTTAGCTTGTAGGTGGAATTGACTTGTCGTGAATTAGAATGTGTTTTTTTTGTTGCTATTATGATGTAGTATCATTTAGCTTTCCTGTATTGAAAGATTGTAATGTGTGCGTAGATTTCTAATCTAATTCTTAAAGACTTCTTCATGTCCATTAGTTATTCTTTTCTCATTGATGATGATCCCAGAATGGTTGAATTCTGGTGAAATTTCTTGTACTTGTCAACTTGTGTAAGCTGGGCTGAGAATCAGTTCATTACATTGCTCAGTAAATTGAAG ATGGCCTTCCATCACCCTCACCACCACCAGCAAAACCTCCACACCACCGCTGCTTCCTATTGCTGCTGCCAACTACCACCTCCACCCTCTTGCCACCATTTACCACCATTATCACCTCCAACCACCGATCCATTTCATGTCGCAGCCATTGTTTCTCAACTTCTCCAATCCCAAAACCACCAAAATCTCCAATCCCAAAACCACCAAAATCTCCACCCCAAAAACCACCAAAATCAAAGACCGGCGCATCAAGAGAATCCGTTTATTTTCTCTCTCCTCCAAAGAATCGATGCCCTTGAATCCTCCCTTCAGAAATACTCAACTTCTGGTTTTTCCTTGAGAGATGCTGCTGCTCGAATAATTCAAGCCCATTTTAGGGCTTATCTTGTTCATAGATCAAGGACTCTTCGTCAGCTCAAAGACCTAGCTTCCATTAAATCCGCTCTTGCTACTTTTAAGTCTTCAATTTCTCGTCAAGCTTTTGTTGATTTTGATTCTCTCTCTCATAATGCTATGGATTTGCTCCATAAACTTGAGTCTATTCAGAGTGGTGATAAGATGATTAGAGACAGTAAGAGGACAGTTACTAGAGAGATTGTTGAATTTTTAGAATTAGTTGATGGGTTTTGTGCGAAGAGGCGTCAAGTTCTAACCATGAAGATCAAGAGCATGAGGTTGGCGAGGAATGATAATATAGCTGCTCGTGATACTAAGGAGTTTTCAGGGCATAATGTGGGTTCGAAAACTCGAACTGTAGACAATAAAGAGAAGAAATTAATGGCAAATTTGAGGGAAAGAGTTGAAAATATTGGTAGGATGGCGAAAGCGCTTGAGGAGCAGGAGCAGGAAGCATTTGGAGATGCTGATATCGACGAATTTAAGCATGTTGATGATGAGGATGATGATCTACTTGGTCAAATAGCTAGCAATTATAGATTGAAAAATGGATTAAATGTAAAGCAACATGCTCAGAGCTCGAATGCCAGAAAACGTGTTTGTTTTGTAGAGGATGGAAACTTGATTAGGTTATATGATACTGATGGGGACTCCTCCAGAAGTACTTCTCGGCTGGTTGATGTGATTGAAGATTCTACTAAAGGAACACACGACGAAGAAGAAGCACAAAGCGATGTCGAAGGGTCCTCACAAAGCAGTGAAGAGTTGAGGAAATTTAGAAGTGATGAAGTCAGTGAAGAGTGTGAGAACCAAGATGAGTTCACATTTTCCACTACTCCAGAACCTGCAAAGATGGAACCCAGAGTGGATTTCATGTCAAGGAAACCTGGTGTAAAAATAGTTTGA MAFHHPHHHQQNLHTTAASYCCCQLPPPPSCHHLPPLSPPTTDPFHVAAIVSQLLQSQNHQNLQSQNHQNLHPKNHQNQRPAHQENPFIFSLLQRIDALESSLQKYSTSGFSLRDAAARIIQAHFRAYLVHRSRTLRQLKDLASIKSALATFKSSISRQAFVDFDSLSHNAMDLLHKLESIQSGDKMIRDSKRTVTREIVEFLELVDGFCAKRRQVLTMKIKSMRLARNDNIAARDTKEFSGHNVGSKTRTVDNKEKKLMANLRERVENIGRMAKALEEQEQEAFGDADIDEFKHVDDEDDDLLGQIASNYRLKNGLNVKQHAQSSNARKRVCFVEDGNLIRLYDTDGDSSRSTSRLVDVIEDSTKGTHDEEEAQSDVEGSSQSSEELRKFRSDEVSEECENQDEFTFSTTPEPAKMEPRVDFMSRKPGVKIV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21320.1 vs. NCBI nr
Match: gi|902184452|gb|KNA10297.1| (hypothetical protein SOVF_145740 [Spinacia oleracea]) HSP 1 Score: 829.3 bits (2141), Expect = 3.000e-237 Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 1
BLAST of Spo21320.1 vs. NCBI nr
Match: gi|731362975|ref|XP_010693179.1| (PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 431.0 bits (1107), Expect = 2.400e-117 Identity = 269/429 (62.70%), Postives = 317/429 (73.89%), Query Frame = 1
BLAST of Spo21320.1 vs. NCBI nr
Match: gi|567877271|ref|XP_006431225.1| (hypothetical protein CICLE_v10011685mg [Citrus clementina]) HSP 1 Score: 221.9 bits (564), Expect = 2.200e-54 Identity = 183/475 (38.53%), Postives = 257/475 (54.11%), Query Frame = 1
BLAST of Spo21320.1 vs. NCBI nr
Match: gi|147819293|emb|CAN68960.1| (hypothetical protein VITISV_019275 [Vitis vinifera]) HSP 1 Score: 221.1 bits (562), Expect = 3.800e-54 Identity = 180/472 (38.14%), Postives = 254/472 (53.81%), Query Frame = 1
BLAST of Spo21320.1 vs. NCBI nr
Match: gi|731419742|ref|XP_010661126.1| (PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Vitis vinifera]) HSP 1 Score: 218.0 bits (554), Expect = 3.200e-53 Identity = 179/468 (38.25%), Postives = 251/468 (53.63%), Query Frame = 1
BLAST of Spo21320.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSM5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_145740 PE=4 SV=1) HSP 1 Score: 829.3 bits (2141), Expect = 2.100e-237 Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 1
BLAST of Spo21320.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGS8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g046310 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 1.700e-117 Identity = 269/429 (62.70%), Postives = 317/429 (73.89%), Query Frame = 1
BLAST of Spo21320.1 vs. UniProtKB/TrEMBL
Match: V4SZE1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011685mg PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.600e-54 Identity = 183/475 (38.53%), Postives = 257/475 (54.11%), Query Frame = 1
BLAST of Spo21320.1 vs. UniProtKB/TrEMBL
Match: A5AFF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019275 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.600e-54 Identity = 180/472 (38.14%), Postives = 254/472 (53.81%), Query Frame = 1
BLAST of Spo21320.1 vs. UniProtKB/TrEMBL
Match: F6H5M7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g01550 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.200e-53 Identity = 179/468 (38.25%), Postives = 251/468 (53.63%), Query Frame = 1
BLAST of Spo21320.1 vs. ExPASy Swiss-Prot
Match: BAG8_ARATH (BAG family molecular chaperone regulator 8, chloroplastic OS=Arabidopsis thaliana GN=BAG1 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.500e-23 Identity = 134/432 (31.02%), Postives = 207/432 (47.92%), Query Frame = 1
BLAST of Spo21320.1 vs. TAIR (Arabidopsis)
Match: AT3G29310.1 (calmodulin-binding protein-related) HSP 1 Score: 110.5 bits (275), Expect = 2.600e-24 Identity = 134/432 (31.02%), Postives = 207/432 (47.92%), Query Frame = 1
BLAST of Spo21320.1 vs. TAIR (Arabidopsis)
Match: AT5G62390.1 (BCL-2-associated athanogene 7) HSP 1 Score: 50.1 bits (118), Expect = 4.100e-6 Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21320.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21320.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21320.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo21320.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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