Spo20933 (gene)

Overview
NameSpo20933
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 17266891 .. 17269776 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGAAATTTATACCGAGTACTCCGTATTGATTTTATGTTCTATAAGTATATGTTTTATTAGGAGATTCAATTTTTTTTTAAAAAAGTAATTGATAAAGTTGATATATATTTTTTATATATAATTGATAAAGTTGATACTTTGATTATTCTGAGTTTGGTAATAATCGCTCGTTAATTCTGTATAACAATCGGTAGTATTATATACTCTGTGTATTTTTCTTCTTCTATAGACAATATTTTAATTAACTTTAAAAATTTAAAAAATGAAAGACACACCATGAGATGACATGTATCATATACTTAATGTCTCTTTTAGTATTATTTTTTAATAGCAATTACACACATAATACTATGCAGTTGAAGATTGCACATATTTGTTTGTATTGTTTTTGGAATAGTTTGTTATTTGCGTGAGAATGGAAAACTATTAATATATTGTTATTATAATTCCATAATAGAAACGTAAACCTTAGCATTATAGAGCTGGATAAATATCCTTCCTATAATTTATAATTTTTTGGCACACCTTAAGACTTGAACCCGTGACGGCGCGACCTCACGTTTAAACAATGACGTGTTTACCATTGACTTATAAACATTGCATGCTATCATGCTAAACAAAATGCTAATAAATGTAATATAAGAGCACACACAACCTTGACATGTTGCTTGGGTCAAGTGATAATTGACCGAGCAAAATGACTACAATGTTGACAATGTACAATGGGTCAAAATTTTATTAACTTGACTCGGGTCGTATATGTGACCCAAAGTCAAGTTAATTAAAAAGAGATGTGGGGCCACATGAAGCGCAACTTGCATGGACCCTAGGCAATAGTTGTTACCTGTTTGCATACAGAGTATTAGTTTAGACTAATATTGGATAAAATCATTTTGTACGATATGCAATGCATATTTATTTTTCTGGGCTCATGTGCTGTCATGCATTCAATGCATCTTATTTTATTTTTTTAAGAAAATTTTTAGGATAAGTTTTTTACAATGCCACGTGTGTACAATTTCCAGGATAAGTTTTTTACAATGCCACGTATGTTAATTTAATTTCATATTTATTTGTTTGTTAAAATTAATAATTGTGTTTGTAGATGAATTTAAAGTAGAGTATACGTAAAAGTAAAAAAGTAGGTGAGAGAAATGAATGACCTTGTGTCAAAATTGTAGAAGAAAAAAGAGAGATTTAAGTAAGTGGTACGTCAAGTTAGTGGAATATGAGTGGTAGAATGAGAAGGATGAGAGAGAGATTATTTTTCATCTGACCGAAAGTCAAGGATGCACATAGTGTAAAGAGAATTGGTTAATAATAACATTTGTGGATATTGAATGGGCTCTACGAAATTATATAAATGTTTCTAATACAGTAATCCGAAGCGTCATCGAGACCTACCAACTAATCTATACTATATATTAAAAGACGTTTATAAAATAGCATACGTGACACGTGGCGCTCTGTTTATGGGTCGTTCGCTCCAGTAAGCTTTATATACATTAAAAAATGTCAAATATGATTAGCATAAGGTTTGAACTCTTGATCTTGAGTTTAAAGAATAAAGCTTTTACCACCAAGCTATTAAATATTTCATGTTATCATTGCAAAAAAAGTTATATATAAGTAAATGTGAATGTTGTTAACGTAGTAACCCGGGGCATCGCCCGGGCCCAAAAACTAGTTTTAATCTTAAACTAAGCGTGAATATTGAATGGGTTTGAATGGGCTCTCCAAACCTCCCTTCGATTCAACTTCAAACATTTTGTCTTACAAAAAAAACACATTTTCAAAAAAATAAATAAATAGAAAAGTCAACAACTTATAGTCATGCAGCCAATCAAACCCGTAGCTTCTCGTATAAGCTGAATAGATTACAGAAGGATGAAAATGTAAATTCATCATTTTTAACAGAAATTAGATTTATTTTCAAGAAGGATTTTAGGGGTAGTTTGGCCATTTCAGTATCAATAAGTAGACTAGTACTGTAGAGCTATTGCTTTTAAAAGGGAAAGATAGGTTACAATACCACCGTCTCGTCCTCCCACAAAAATAAAATTAACTCTCTCACCTCGCCTCTGCTCTCTCGTTTCGCTCCATCTCTCCTCTTTCTCTCTCTTCGGTGCACCTACAGTATCATTTCAGGTGATTCTGACATTTTTGTTGTTGATAATTTGTTGCTTTTCTAGGGTTTTAGTCGATTGTATTTGAAATATTTGAGATGAAAGTTGTGATTTTGTTTTTGACTTTTTCGTTGTCGATAATTTGTTAGGGTTATTGTATTTGATATATTTGAGGGAGAAGTTGTAATTTTGTTGTCGATTTGATTTTGATTTTTTCGTTGTTGATAATTTGTTAGGGTTTTGATTGATTGTATTTGATATATTTGAGGGAGAAGTTGTCATTTTGTTGTCGATTTGATTTTGACTTTTTCGTTATTGATAATTGGTTAGGGTTTTGATTGATTGTATTTGAAATATTTGAGGGAGAAGTTTTAATTTCGTTGTCAATTTTATCGATTTCTCTAGGGTTTATGAAATTCGAATGAAAGTTTTGGTCTTGATAAAATATGGTATTGTGATGAATTACAGGTCTCCATGTCTATTGTGAATCTGAAGAAGAAAAATTTGTGGATTCTTCTTTTTGATTGTTGTTTCTTCAAGAGGGGACGTTGGTGGTGGGGTTCGTAATTTTTCGGCTCTTGTTTTGATCATCGGAGAGTGAGTTTTTCGTCTCTGATTTCTCTCTCTCCATCCTTCAATTGTTAATTCGATCCTTCATCCTTGGTTGTTTGTGCTGAGTATTCTTCAATTGTCTCGCGATTGTGCTGAATTAGTAGTAGTGGTAGTGGTTGACTGGTTGTTGCTTTCTGTTTGA

mRNA sequence

ATGGTTACAATACCACCGTCTCGTCCTCCCACAAAAATAAAATTAACTCTCTCACCTCGCCTCTGCTCTCTCGTTTCGCTCCATCTCTCCTCTTTCTCTCTCTTCGGTGCACCTACAGTATCATTTCAGGTCTCCATGTCTATTGTGAATCTGAAGAAGAAAAATTTGTGGATTCTTCTTTTTGATTGTTGTTTCTTCAAGAGGGGACGTTGGTGGTGGGGTTCTATTCTTCAATTGTCTCGCGATTGTGCTGAATTAGTAGTAGTGGTAGTGGTTGACTGGTTGTTGCTTTCTGTTTGA

Coding sequence (CDS)

ATGGTTACAATACCACCGTCTCGTCCTCCCACAAAAATAAAATTAACTCTCTCACCTCGCCTCTGCTCTCTCGTTTCGCTCCATCTCTCCTCTTTCTCTCTCTTCGGTGCACCTACAGTATCATTTCAGGTCTCCATGTCTATTGTGAATCTGAAGAAGAAAAATTTGTGGATTCTTCTTTTTGATTGTTGTTTCTTCAAGAGGGGACGTTGGTGGTGGGGTTCTATTCTTCAATTGTCTCGCGATTGTGCTGAATTAGTAGTAGTGGTAGTGGTTGACTGGTTGTTGCTTTCTGTTTGA

Protein sequence

MVTIPPSRPPTKIKLTLSPRLCSLVSLHLSSFSLFGAPTVSFQVSMSIVNLKKKNLWILLFDCCFFKRGRWWWGSILQLSRDCAELVVVVVVDWLLLSV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20933.1Spo20933.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo20933.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20933.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20933.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20933.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008643 carbohydrate transport
biological_process GO:0006096 glycolytic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0015693 magnesium ion transport
biological_process GO:0007165 signal transduction
biological_process GO:0006508 proteolysis
biological_process GO:0006857 oligopeptide transport
biological_process GO:0015031 protein transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009060 aerobic respiration
biological_process GO:0016567 protein ubiquitination
biological_process GO:0019521 D-gluconate metabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0018149 peptide cross-linking
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0033587 shikimate biosynthetic process
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0006085 acetyl-CoA biosynthetic process
biological_process GO:0009733 response to auxin
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0050832 defense response to fungus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0044237 cellular metabolic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0008152 metabolic process
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0010337 regulation of salicylic acid metabolic process
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0055085 transmembrane transport
biological_process GO:0006730 one-carbon metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0015976 carbon utilization
biological_process GO:0010200 response to chitin
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0006629 lipid metabolic process
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
biological_process GO:0061025 membrane fusion
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0010014 meristem initiation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0006914 autophagy
biological_process GO:0046786 viral replication complex formation and maintenance
biological_process GO:0009611 response to wounding
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0000165 MAPK cascade
biological_process GO:0007033 vacuole organization
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0009264 deoxyribonucleotide catabolic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0016120 carotene biosynthetic process
biological_process GO:0006486 protein glycosylation
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0009630 gravitropism
biological_process GO:0006816 calcium ion transport
biological_process GO:0043407 negative regulation of MAP kinase activity
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0005768 endosome
cellular_component GO:0090406 pollen tube
cellular_component GO:0032580 Golgi cisterna membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005797 Golgi medial cisterna
cellular_component GO:0009705 plant-type vacuole membrane
cellular_component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005773 vacuole
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0009346 citrate lyase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005622 intracellular
cellular_component GO:0009507 chloroplast
cellular_component GO:0005576 extracellular region
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005737 cytoplasm
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0042709 succinate-CoA ligase complex
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0004775 succinate-CoA ligase (ADP-forming) activity
molecular_function GO:0003878 ATP citrate synthase activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0003856 3-dehydroquinate synthase activity
molecular_function GO:0051996 squalene synthase activity
molecular_function GO:0005488 binding
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0004310 farnesyl-diphosphate farnesyltransferase activity
molecular_function GO:0008081 phosphoric diester hydrolase activity
molecular_function GO:0004089 carbonate dehydratase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0045435 lycopene epsilon cyclase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0004325 ferrochelatase activity
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0051920 peroxiredoxin activity
molecular_function GO:0035673 oligopeptide transmembrane transporter activity
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity
molecular_function GO:0050661 NADP binding
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0015095 magnesium ion transmembrane transporter activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0000989 transcription factor activity, transcription factor binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005198 structural molecule activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo197130.75Barchart | Table
Spo088500.74Barchart | Table
Spo173290.73Barchart | Table
Spo071840.73Barchart | Table
Spo146610.73Barchart | Table
Spo053410.73Barchart | Table
Spo055570.73Barchart | Table
Spo069620.72Barchart | Table
Spo046620.72Barchart | Table
Spo134240.72Barchart | Table
Spo031960.72Barchart | Table
Spo195580.72Barchart | Table
Spo216910.72Barchart | Table
Spo089690.72Barchart | Table
Spo233460.72Barchart | Table
Spo108150.72Barchart | Table
Spo242940.71Barchart | Table
Spo028130.71Barchart | Table
Spo140080.71Barchart | Table
Spo119180.71Barchart | Table
Spo249850.71Barchart | Table
Spo199650.71Barchart | Table
Spo087260.70Barchart | Table
Spo059900.70Barchart | Table
Spo160760.70Barchart | Table
Spo154200.69Barchart | Table
Spo019340.69Barchart | Table
Spo022800.69Barchart | Table
Spo035610.69Barchart | Table
Spo076090.69Barchart | Table
Spo093500.69Barchart | Table
Spo206130.69Barchart | Table
Spo231230.69Barchart | Table
Spo271020.69Barchart | Table
Spo155290.68Barchart | Table
Spo170320.68Barchart | Table
Spo032510.68Barchart | Table
Spo300130.68Barchart | Table
Spo109400.68Barchart | Table
Spo065060.68Barchart | Table
Spo018400.68Barchart | Table
Spo271980.68Barchart | Table
Spo251070.68Barchart | Table
Spo089990.67Barchart | Table
Spo187140.67Barchart | Table
Spo205440.67Barchart | Table
Spo109230.67Barchart | Table
Spo096710.67Barchart | Table
Spo060300.67Barchart | Table
Spo122020.67Barchart | Table
Spo147770.67Barchart | Table
Spo088730.67Barchart | Table
Spo245980.67Barchart | Table
Spo158650.67Barchart | Table
Spo217230.67Barchart | Table
Spo165550.67Barchart | Table
Spo086200.67Barchart | Table
Spo056550.67Barchart | Table
Spo050930.67Barchart | Table
Spo149650.67Barchart | Table
Spo173860.67Barchart | Table
Spo031970.66Barchart | Table
Spo003440.66Barchart | Table
Spo100190.66Barchart | Table
Spo050860.66Barchart | Table
Spo049850.66Barchart | Table
Spo047020.66Barchart | Table
Spo140960.66Barchart | Table
Spo038670.66Barchart | Table
Spo149800.66Barchart | Table
Spo001750.66Barchart | Table
Spo166910.66Barchart | Table
Spo169110.66Barchart | Table
Spo031770.66Barchart | Table
Spo024070.66Barchart | Table
Spo021150.66Barchart | Table
Spo225790.66Barchart | Table
Spo233290.66Barchart | Table
Spo235800.66Barchart | Table
Spo008630.66Barchart | Table
Spo245490.66Barchart | Table
Spo061640.66Barchart | Table
Spo068050.66Barchart | Table
Spo246130.65Barchart | Table
Spo144020.65Barchart | Table
Spo235490.65Barchart | Table
Spo235770.65Barchart | Table
Spo056270.65Barchart | Table
Spo062940.65Barchart | Table
Spo059280.65Barchart | Table
Spo181470.65Barchart | Table
Spo214650.65Barchart | Table
Spo124230.65Barchart | Table
Spo033820.65Barchart | Table
Spo041460.65Barchart | Table
Spo227600.65Barchart | Table
Spo147120.65Barchart | Table