Spo20780 (gene) | SpinachBase

Overview


Name	Spo20780
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Location	chr3 : 39183004 .. 39190008 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAACATGAATTCTCCCTATCAAGTTCAGCGTCAATCACCAATTAACCAAAAAACAATTGGTTATGAGAGCTGAGAATATTATATCACCATTAGTCTTGTTGATTTGCATCTTTTTTGCAAAGAAGCGCGAAAATGGTGACACTAACACTATCCTTGAGCTCAACTCTATCATCATCTCCAATCTCTCCCCCATTCCCTCCAAACCCAAAACACTCAAATTCTTTCTCCTACAAATCCTCCAATGCCGTCATTTCTCGACGAGGCACCGCGATTCTCCTCACAATTGCCCCTTTTCTTCTCCAAATCCCATCTCCAGCATTTGCATTCGACCTAGGCATCTGTGCGTAATCTTCTTTTCTGCTTTACTCGATTTCAATCGTAGCTCAAATTTGTTTTTTCATCTATATTTGTACTTACAAATGATTATTTCAATCTGACAAAACCCTAATTTTTGGATTTCGTCCTGATTTTTTTGCAGCAGGACCAAAAGATTGGCTCAGGGAGCAGAAGAAGAAGTCGATTAAGTATGTTTTAGCCCCAATTGACGCTTCGCAAGAAATTCTTCGCCATGCTTATCAGTTGCTCAGTATGTTAAATTTTCTTCCTTGCATTTACTTTCTTAGATTTTGGTAGCTTATCTAGTTTATTTTTACATTTCTGCCGTTTTATTTTGAAAATTTTGCATAAATAGTGGCAAAGGATTCTAGTTTTGAGCAAAAGGATTTGGAGGAAATTCGGGGAATGTTGACATCTGCTGCTAGGGATTGTGTTACTGAAGATAGGAATTCTTTGGTTGCATTTCAAGCTAGAACTGGCGTCGAGGTCTGATTTTCTTGTATTTTACATTTTCATTGACTAGAATTCTTGGACATACAGTCGATTTGAAAATATGTTCTGCCCCTTTTCTTATTTCTGGAAGTTTGTCTTCCCTGTAAGGGTCATATGGAATTAATTTTCTTATTTTGTGGCGAAATTCAACTCTGGACTTTTGGGATGGAGTAATTACTCATTGGAATATGTGTATTACTTGTTCAAGTAAGTAAAGTGATGAAAAAATGTATTTTGCAAGTTAGCAACTTAGAAAGTCCAATTTGTAAATGAAAAGGAATTGTATTGGTTCATGGTTGTTAAACTGTAAACCATTATGAGGCGGTTGTTGGAGGCATAATCTTAAAATATATTCTTTAATTTTTTTATGATTTTGCTAATGTTACATTGTACTGAGGTTGTCTAGAGAGGGTTTGTTTGTGTGTCTAAAGCTCCTAACTTCTATTTGCGTTGATAACAGGTTTGCACGTTTAAATTAGTCGTGACTAATGCAGCATCATTACTTGATGATGATGACTCTGCCAAGTTGGAAGCTGAAGCCAGGCTAAGCGATCTTATAAGGTAGTTGATATATGATTTTTTTTTCGTACCAAACTTATATCTGTTCTTTTTTATACTTCGTGTTGTTTAGTGATCGGATGTCGAAAATCGAAAGTGCCCCTTTCTTGTCTTTTGAAAATAAGCGTAGTGCTTTCTATCTCTATCCTTCCTGTTATTTCCCTTCTATGGCCTGGACAAAGGGAATTAGGTAGGAAAATGGTCCACGGGGGGATGGGGAAAAGTCTGAGATGGGACTATTTTCATGATAGTATCTTCTTCAAAGAGGCCGTTGTTAGTCCTTGACTCCTTGGCACTGCTTCACTTCATCTTTGGAGGGAGCCTATGCAGTCCCTATCTCCACAGAAGGGTTCCTCCTGCTGTTGCTGTGTAATAAATGGCGATGTAATACATTTGATGAACAAAATTATCGAAGCTTTATATTGTAAGAAATGTGGCCGGTTTGGAGTCTCTACTCTCTAGTGTACTCTATCAAGGGTTCTTCTCCCAAAATTTTGGTTGGCTAGTGTTTCAATACACTTGTATCAAGAGCTCCTTATGCATTGTAGGTGTCTTGAGTTGCACATTTAAAGCGGGAGATGTAAGAAAGATAGAAAATTCAGTTTAAGTTTGCTGAGAGGAGCTTTTTGTTGCATTTAAATTTGTAGCAGATGCTATATTTTTCTATGTTGTGATATTGATGTTTATGATGTTTAGGAACCATGTGACACGGGTACTAGCGTCGGACACGGTTAGGTTCAATGGGTAATGGGTAATCCAGAACTCCTGAAAACTTAGTGAAGCCTTTTTCTCCCTCTTGATAGTTTGTTGTATTCTTCTTCATAGACTTTTGAATGCATGGAGGTCTCACACTCTGACACAACCATTTCAAGTTGCAATTTCACCTTTGTTGGATGTTATGGGCGTCTTTGTGGGTTACTAACTTGAAATATGTTGGAATTCTCATTATTTCTGTTGTTTAGGTGTGTGAATATGTGATTGATCTTCTTATTAATTGCATATTGATACATCTATGACTGATTTAGTTATTTATTGGGTTAGATCATTCACCTTTCTAAATGGTGTGGCCAAGGAAGCAGATTTTCAGCTTGTCCCAGATAGGTATGTTGATTTCCACTTTGAGTTTATGGGCAACAATCTATGTCCTAAAATACGATGTTGAATCTCCAAAGTGTCGCACATCTAAATGAGTTGGGCAGTGAGAAATAACTTTGAAAAGACAAAGGTATAGGAGAATGCAGCCTCACTTTAAAAGGAATTTTATCTGAAATACATTTGGACCTGGTGTAAGCTCTATTTTCTTGTTTATGAAATTTATGATGTCAACAGATGTCTTGCCATATTATGGAATTACAAGATAAGTTTCACTTTTGTTTACAACGGTTACATTGTTCCTATTAATATCCTGTGCCTTTTCACCCATAAACATACATTGATTTCACCCCTTTACCAAGAGACACGTACATATGTTTGGAGCAAGTAGTATTTAGTTTTGTATATGGTAAATTGGAGAACTTGAGAAATTACCTGCATGCTTTTGCTTCTGATATGTTTGTTGTTATGTAAAGCAGACAAAAGGTTGCAAACGCTGTGATGGATTCATTGTCGTCTCTCAATAATTTTGAACAAAGTATCAAGGGATGCATTGAAGTTTGACTTCCAACTGGATGGAAATCTTGTATGTATATCTAAGAGTTGATGGCTGTGAAACAGTAGATTTCTGTCTGGAACTTCATGCAATTATTCTTGTCTGAGATGCTAATACGTTGGTTCTTTTTTCCTAAACTGCAATAGAGAAACAAGAGCTTGAATTTGTTTTTACTGGCAGTTTGTTTTTTTTATTTTTTTTAAATTGATGGTTAATGGGTGCTGTTTGCTTGAGAAACTGTGAATTGACAATTTTTTTTTTTGAGACAAGTGATGATTGGAGTCAATCACGAGTCTTTCGGAGGATGCATTAGCATTAAATGCAACTATGAGCTTCGATTTATACTTTTGTAGTCTAATTTGACATATGATGTCCTGTGCTATTAGGTAGATAATGGATGTCATTTCTTGAATCCCAGATGATATAAGTCGTGTTTTATGTGTCTTTTGATGTCATACCAATTATTCTGAGGGTTGGTTTCTGTGGAGAGATGCATATTTGAATCTTAGTGTACATTAACTTATACAGAGTATTATGTTTAAATGTTTATTAGAAATTGTTTTCTACTCCTGATCCCATAAATGAGACCATGTACTGTTTATTATATTTTTTGGTTTCTTAGTAAGGGGGGATGTGAGCGTAGATGAATGACGGGGGCTACATTTCTCATGTTTTAAAAAATTGTTTATCTTTTATATATGATCTTCATGTTTCACCGTCACTACATCAAATGGATTCCTGTCGGTTATTCGCAATGGGCTGGCAAATTCGAAAGTTTTGATGGTAAATGTTATACTAGATGTTCTTTTCTATGCTTGTACGGATATTGAGGTTGTTCTGAAGCGGATTAGTTTTATCATTGCAATTCACTGCAGTTTGTGCCATAAGGAGGAAGAGTTTGTTTATCTTTTACTCTCCTATCTATTGATCCTCTCAATTTGGCACTTTCTCATTAGCCTTGTTAGGGTTAAACTGGGTTCAACTTTGTTCTGTAACAGACGTGCTGTTTTCCTGGAAAAGAAGCATGATAAAAGGCTAGTTTACTGCAATTTAGAAAATGGTTAGTGGTGCACTTGGAAAGGAAAAAAACTAACATAATTTTGAGGGTTTTCGTTCTTCATGGTTTCAAATTCCAATATGCGAGGCTTTTGTTTATCTGGAATCAAGTTTGTCTTGTGCCCGCTGCTTCTTGATTTGTAGATAAATTACTTAATGATAGATTGAGAGCATGAGCTTGTTTATCCGTAGCCTTCTTTTTGTGGACGGGTGTCACCCCTTGGTGCCTTAATAATACAATCCTGTATTACCTTCATTGGAAAAAAGAAAGAAAAAAAAAGACACTAGAGTGGTAGATGATTCCATATGTTTTTTATTCTTCTTTTGCATACTTCATGCACTGACTGATTTCAGTCCATCAAGGTACCATTACCTTTGTTCAACGTACTTAGGTTGTAAATGATCAAATTCAAAAACTTATCCATGTAGACTTCGGTCACCAGTTTGGTACTTGGTATATGAATGACATAGAAACTCATCTGTTTGTATATTGATTTACAATAAGGAGATCAATTGGTTGTTCAAATCGGAAATCCAGAAGCTTGTACAAGATACAGGCGACAGCATGGTGTTCCATCCTCTGGGTCTATTTCGATTGACCTTGGTATGGTGCGGAGTTTGTCAAACATATTCAACGGATCATTCAGGAGCCCAAAATGTGCGTCTGGATCACCAATTTGTGATAGCTTTACATCTGAAAATCCTAGAGAAGGTAGGAGTTCATCTGGCCAATCACAGTAAAATTGAAAAGTGGACTTTGAAAGCATGGTTGATTGTTTGTTCATGAAATCTGCCAGTACCACAGTTGTAGTAAGGGTACTTTGGGAAGCTATGGTCCTTAGCACGTGGATGGCATCGCAATTGGATAGGTAGTAGAGAAGCCCTTCAAGAATCCACACAGTATTCTTCTCAGGCACAAATCCAGAATTCTGAAGCTTTTCCAGCCAATCCTGACCTGTGATGTCAGCTTCGACTCTGGTTAGCATCTTAGCTTTCATTTCTATTTCTTGCTGGTTATCTCTGGGTACTGTGGCTTCCTGTAGAAGAGATGCTTTCACTTGTAGGACTTGAGGAAAATCTACTTCAAAGACATGACTATTTGTCAAGCATTCTAACCGATATGCTCTAGTGTCCATACCTGTAAATCATTAAGAACCAATGGAACTTGATATTGAAAGAAACCATAAAACAGTTATGTTAAATTGAACAACAACGTTGACTTACTGCAGGTAGTTGTAGGTTCATTGGGAGAAAACACATTATTGTCAATGAAGAACCATCTCTCTTATGACTTGCATTTTTATGTTACCAAGCATTGAAGCCTTATTTGTTGTCTTTCTCTAATAGTTGTTGCAGAACTTGCAGTTACTGCAATTTGCTTCGAATTATAAATGTGATTGGTAGTGTTTGGGTTCACATTATGTGCGATAATTATTTTATTAAATGATGCTCTTTCGTCTACAAGGGTTTTTTTAGTGTCGTATTGTAGTTTCCATTTCTTTGGGTCTTCGTCTTCTCTGAGTTTTGCTAAGCTCCTGGTTCATTTCTCGGGATATAGATTAAACAGAATTATTCTATCTGATTTGTAGATCCATTGATGGCCATTTGAATCATTAACTTCATGATCAAACGAATAAAGGTGAGTGGTAGACTGGTAGCTATAGCTTATTGGACCGTGTTTCTAATCAGTCAACATTTACTATTTTCGCCGCCCTGTCCCCTTAAATAGGAAAGCAACAGCAGATGGCTTTGATTATGATGCATTAGATGAGAATATTAGGTTTTAGGTGGGTAAACTATACTCATAAATCTGTAGTCTAGAATCACTTCGAGTTTATATATTTGATTCCAATATCAAATATAACTGATCATTATTGTTGGAAAATAATAGCTTATTGAAAATAAGTGAATATAACTGCAGGGCATGAGAGGAAATTAGTACTATTATTTTGTTTTTGTATACAATCAGTTTGCAGAATGAGGTAGCAAAACAAGCATTTATGTGGCTGACCTGCACCAAGAAGAACAACTTGCAACATTTCCTTATCATTGAGGAAAGTAACTGCAGCTTCAAGTTTTGAATCAAACCAGAGGGTTCGAACTGCAAGTATGACGCCAGAAACTTCACGGGCTTGTTTGAGGCAATCTTTTTGTATCTTCTGGTAAAAACTAGTGAGTTGAGTCTCTCCTGCAAGTAATTCTGCTAGCATGTCATTAGTCACATGCTTCCACAGGGCTCTCCCAGCTGCAGTTTGGCATGCTGTACGCTGTAGGGGATTCCAATCAGTCTCAATTGCTGCATGAAGTTTCTGAACTTTATCAACAGAGAGTAAGCTCGGAAGCCTTAGCTCTGACCAGAATGGAGGGGCTTCTGATAATCTATTGTCTTCATTAGTCATGCTTCGAAACCACCGAGTTTTTTTAGGTAGTAACAGGGGAAATGTACTAACACAAAACCATTTGTAATTATATTCTTAAAGTTAGAGGTGGATGGGTGTACTTTGCTCATTCTCATTTTAGGTAGGGATAAGATGAAAAGGGAACCACACACTAAACTCAAATCTTTTAAATCAATTTGGTTCATGTATATAGGACGTAGTGACCAGAGTCCACGACTACCACAAGTGCTTGGCTTCAGGGTTAAGCTTTCTACTTAAGGAGTTGTACTCTTATACATATATGCTCCAATAGGGAAAATAATAAAATAAAGGAACAATTGGACTTTTGTATACGGAGTATATCGTTTGCATTTTCTTTTTCTTTTTTTTTTGGTGGCGAAAATTGATCCTATGTTTAAAAATATTTTCTATAAATTATATTAGTGAAAAATGGTAACGACCTATTTGATAGACAGTAATCTTGACCCATTTAATGGTAATTGATATATGCAAGCTTTTGTAACTCTTTATTTTA

mRNA sequence

CCGAACATGAATTCTCCCTATCAAGTTCAGCGTCAATCACCAATTAACCAAAAAACAATTGGTTATGAGAGCTGAGAATATTATATCACCATTAGTCTTGTTGATTTGCATCTTTTTTGCAAAGAAGCGCGAAAATGGTGACACTAACACTATCCTTGAGCTCAACTCTATCATCATCTCCAATCTCTCCCCCATTCCCTCCAAACCCAAAACACTCAAATTCTTTCTCCTACAAATCCTCCAATGCCGTCATTTCTCGACGAGGCACCGCGATTCTCCTCACAATTGCCCCTTTTCTTCTCCAAATCCCATCTCCAGCATTTGCATTCGACCTAGGCATCTCAGGACCAAAAGATTGGCTCAGGGAGCAGAAGAAGAAGTCGATTAAGTATGTTTTAGCCCCAATTGACGCTTCGCAAGAAATTCTTCGCCATGCTTATCAGTTGCTCATGGCAAAGGATTCTAGTTTTGAGCAAAAGGATTTGGAGGAAATTCGGGGAATGTTGACATCTGCTGCTAGGGATTGTGTTACTGAAGATAGGAATTCTTTGGTTGCATTTCAAGCTAGAACTGGCGTCGAGGTTTGCACGTTTAAATTAGTCGTGACTAATGCAGCATCATTACTTGATGATGATGACTCTGCCAAGTTGGAAGCTGAAGCCAGGCTAAGCGATCTTATAAGATCATTCACCTTTCTAAATGGTGTGGCCAAGGAAGCAGATTTTCAGCTTGTCCCAGATAGACAAAAGGTTGCAAACGCTGTGATGGATTCATTGTCGTCTCTCAATAATTTTGAACAAAGTATCAAGGGATGCATTGAAGTTTGACTTCCAACTGGATGGAAATCTTGTATGTATATCTAAGAGTTGATGGCTGTGAAACAGTAGATTTCTGTCTGGAACTTCATGCAATTATTCTTGTCTGAGATGCTAATACGTTGGTTCTTTTTTCCTAAACTGCAATAGAGAAACAAGAGCTTGAATTTGTTTTTACTGGCAGTTTGTTTTTTTTATTTTTTTTAAATTGATGGTTAATGGGTGCTGTTTGCTTGAGAAACTGTGAATTGACAATTTTTTTTTTTGAGACAAGTGATGATTGGAGTCAATCACGAGTCTTTCGGAGGATGCATTAGCATTAAATGCAACTATGAGCTTCGATTTATACTTTTGTAGTCTAATTTGACATATGATGTCCTGTGCTATTAGGTAGATAATGGATGTCATTTCTTGAATCCCAGATGATATAAGTCGTGTTTTATGTGTCTTTTGATGTCATACCAATTATTCTGAGGGTTGGTTTCTGTGGAGAGATGCATATTTGAATCTTAGTGTACATTAACTTATACAGAGTATTATGTTTAAATGTTTATTAGAAATTGTTTTCTACTCCTGATCCCATAAATGAGACCATGTACTGTTTATTATATTTTTTGGTTTCTTAGTAAGGGGGGATGTGAGCGTAGATGAATGACGGGGGCTACATTTCTCATGTTTTAAAAAATTGTTTATCTTTTATATATGATCTTCATGTTTCACCGTCACTACATCAAATGGATTCCTGTCGGTTATTCGCAATGGGCTGGCAAATTCGAAAGTTTTGATGGTAAATGTTATACTAGATGTTCTTTTCTATGCTTGTACGGATATTGAGGTTGTTCTGAAGCGGATTAGTTTTATCATTGCAATTCACTGCAGTTTGTGCCATAAGGAGGAAGAGTTTGTTTATCTTTTACTCTCCTATCTATTGATCCTCTCAATTTGGCACTTTCTCATTAGCCTTGTTAGGGTTAAACTGGGTTCAACTTTGTTCTGTAACAGACGTGCTGTTTTCCTGGAAAAGAAGCATGATAAAAGGCTAGTTTACTGCAATTTAGAAAATGGTTAGTGGTGCACTTGGAAAGGAAAAAAACTAACATAATTTTGAGGGTTTTCGTTCTTCATGGTTTCAAATTCCAATATGCGAGGCTTTTGTTTATCTGGAATCAAGTTTGTCTTGTGCCCGCTGCTTCTTGATTTGTAGATAAATTACTTAATGATAGATTGAGAGCATGAGCTTGTTTATCCGTAGCCTTCTTTTTGTGGACGGGTGTCACCCCTTGGTGCCTTAATAATACAATCCTGTATTACCTTCATTGGAAAAAAGAAAGAAAAAAAAAGACACTAGAGTGGTAGATGATTCCATATGTTTTTTATTCTTCTTTTGCATACTTCATGCACTGACTGATTTCAGTCCATCAAGGTACCATTACCTTTGTTCAACGTACTTAGGTTGTAAATGATCAAATTCAAAAACTTATCCATGTAGACTTCGGTCACCAGTTTGGTACTTGGTATATGAATGACATAGAAACTCATCTGTTTGTATATTGATTTACAATAAGGAGATCAATTGGTTGTTCAAATCGGAAATCCAGAAGCTTGTACAAGATACAGGCGACAGCATGGTGTTCCATCCTCTGGGTCTATTTCGATTGACCTTGGTATGGTGCGGAGTTTGTCAAACATATTCAACGGATCATTCAGGAGCCCAAAATGTGCGTCTGGATCACCAATTTGTGATAGCTTTACATCTGAAAATCCTAGAGAAGGTAGGAGTTCATCTGGCCAATCACAGTAAAATTGAAAAGTGGACTTTGAAAGCATGGTTGATTGTTTGTTCATGAAATCTGCCAGTACCACAGTTGTAGTAAGGGTACTTTGGGAAGCTATGGTCCTTAGCACGTGGATGGCATCGCAATTGGATAGGTAGTAGAGAAGCCCTTCAAGAATCCACACAGTATTCTTCTCAGGCACAAATCCAGAATTCTGAAGCTTTTCCAGCCAATCCTGACCTGTGATGTCAGCTTCGACTCTGGTTAGCATCTTAGCTTTCATTTCTATTTCTTGCTGGTTATCTCTGGGTACTGTGGCTTCCTGTAGAAGAGATGCTTTCACTTGTAGGACTTGAGGAAAATCTACTTCAAAGACATGACTATTTGTCAAGCATTCTAACCGATATGCTCTAGTGTCCATACCTGTAAATCATTAAGAACCAATGGAACTTGATATTGAAAGAAACCATAAAACAGTTATGTTAAATTGAACAACAACGTTGACTTACTGCAGGTAGTTGTAGGTTCATTGGGAGAAAACACATTATTGTCAATGAAGAACCATCTCTCTTATGACTTGCATTTTTATGTTACCAAGCATTGAAGCCTTATTTGTTGTCTTTCTCTAATAGTTGTTGCAGAACTTGCAGTTACTGCAATTTGCTTCGAATTATAAATGTGATTGGTAGTGTTTGGGTTCACATTATGTGCGATAATTATTTTATTAAATGATGCTCTTTCGTCTACAAGGGTTTTTTTAGTGTCGTATTGTAGTTTCCATTTCTTTGGGTCTTCGTCTTCTCTGAGTTTTGCTAAGCTCCTGGTTCATTTCTCGGGATATAGATTAAACAGAATTATTCTATCTGATTTGTAGATCCATTGATGGCCATTTGAATCATTAACTTCATGATCAAACGAATAAAGGTGAGTGGTAGACTGGTAGCTATAGCTTATTGGACCGTGTTTCTAATCAGTCAACATTTACTATTTTCGCCGCCCTGTCCCCTTAAATAGGAAAGCAACAGCAGATGGCTTTGATTATGATGCATTAGATGAGAATATTAGGTTTTAGGTGGGTAAACTATACTCATAAATCTGTAGTCTAGAATCACTTCGAGTTTATATATTTGATTCCAATATCAAATATAACTGATCATTATTGTTGGAAAATAATAGCTTATTGAAAATAAGTGAATATAACTGCAGGGCATGAGAGGAAATTAGTACTATTATTTTGTTTTTGTATACAATCAGTTTGCAGAATGAGGTAGCAAAACAAGCATTTATGTGGCTGACCTGCACCAAGAAGAACAACTTGCAACATTTCCTTATCATTGAGGAAAGTAACTGCAGCTTCAAGTTTTGAATCAAACCAGAGGGTTCGAACTGCAAGTATGACGCCAGAAACTTCACGGGCTTGTTTGAGGCAATCTTTTTGTATCTTCTGGTAAAAACTAGTGAGTTGAGTCTCTCCTGCAAGTAATTCTGCTAGCATGTCATTAGTCACATGCTTCCACAGGGCTCTCCCAGCTGCAGTTTGGCATGCTGTACGCTGTAGGGGATTCCAATCAGTCTCAATTGCTGCATGAAGTTTCTGAACTTTATCAACAGAGAGTAAGCTCGGAAGCCTTAGCTCTGACCAGAATGGAGGGGCTTCTGATAATCTATTGTCTTCATTAGTCATGCTTCGAAACCACCGAGTTTTTTTAGGTAGTAACAGGGGAAATGTACTAACACAAAACCATTTGTAATTATATTCTTAAAGTTAGAGGTGGATGGGTGTACTTTGCTCATTCTCATTTTAGGTAGGGATAAGATGAAAAGGGAACCACACACTAAACTCAAATCTTTTAAATCAATTTGGTTCATGTATATAGGACGTAGTGACCAGAGTCCACGACTACCACAAGTGCTTGGCTTCAGGGTTAAGCTTTCTACTTAAGGAGTTGTACTCTTATACATATATGCTCCAATAGGGAAAATAATAAAATAAAGGAACAATTGGACTTTTGTATACGGAGTATATCGTTTGCATTTTCTTTTTCTTTTTTTTTTGGTGGCGAAAATTGATCCTATGTTTAAAAATATTTTCTATAAATTATATTAGTGAAAAATGGTAACGACCTATTTGATAGACAGTAATCTTGACCCATTTAATGGTAATTGATATATGCAAGCTTTTGTAACTCTTTATTTTA

Coding sequence (CDS)

ATGGTGACACTAACACTATCCTTGAGCTCAACTCTATCATCATCTCCAATCTCTCCCCCATTCCCTCCAAACCCAAAACACTCAAATTCTTTCTCCTACAAATCCTCCAATGCCGTCATTTCTCGACGAGGCACCGCGATTCTCCTCACAATTGCCCCTTTTCTTCTCCAAATCCCATCTCCAGCATTTGCATTCGACCTAGGCATCTCAGGACCAAAAGATTGGCTCAGGGAGCAGAAGAAGAAGTCGATTAAGTATGTTTTAGCCCCAATTGACGCTTCGCAAGAAATTCTTCGCCATGCTTATCAGTTGCTCATGGCAAAGGATTCTAGTTTTGAGCAAAAGGATTTGGAGGAAATTCGGGGAATGTTGACATCTGCTGCTAGGGATTGTGTTACTGAAGATAGGAATTCTTTGGTTGCATTTCAAGCTAGAACTGGCGTCGAGGTTTGCACGTTTAAATTAGTCGTGACTAATGCAGCATCATTACTTGATGATGATGACTCTGCCAAGTTGGAAGCTGAAGCCAGGCTAAGCGATCTTATAAGATCATTCACCTTTCTAAATGGTGTGGCCAAGGAAGCAGATTTTCAGCTTGTCCCAGATAGACAAAAGGTTGCAAACGCTGTGATGGATTCATTGTCGTCTCTCAATAATTTTGAACAAAGTATCAAGGGATGCATTGAAGTTTGA

Protein sequence

MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPSPAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEIRGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSDLIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo20780.1	Spo20780.1	mRNA

Homology

[Close]

BLAST of Spo20780.1 vs. NCBI nr
Match: gi|902111673|gb|KNA03768.1| (hypothetical protein SOVF_205960 [Spinacia oleracea])

HSP 1 Score: 437.6 bits (1124), Expect = 1.400e-119
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


		  
Query: 1   MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS 60
           MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS
Sbjct: 1   MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS 60

Query: 61  PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI 120
           PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI
Sbjct: 61  PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI 120

Query: 121 RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD 180
           RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD
Sbjct: 121 RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD 180

Query: 181 LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
           LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV
Sbjct: 181 LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 230

[Close]

BLAST of Spo20780.1 vs. NCBI nr
Match: gi|731314133|ref|XP_010684332.1| (PREDICTED: uncharacterized protein LOC104898898 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 317.0 bits (811), Expect = 2.700e-83
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1


		  
Query: 1   MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS 60
           M+TLTL LSSTLSS+ ISPP P N K   S S  +S   ISRR T+ LL+I+PFLL +P 
Sbjct: 10  MMTLTLCLSSTLSSTSISPPLPSNLKTPISHS-NNSQVFISRRYTSFLLSISPFLLSLPP 69

Query: 61  PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI 120
           PAFAF++GISGPKDWLREQKKKSIKY+LAPIDASQ+ILRH YQLL+A+D+    KDLEEI
Sbjct: 70  PAFAFNIGISGPKDWLREQKKKSIKYLLAPIDASQQILRHVYQLLLAEDNVLNPKDLEEI 129

Query: 121 RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD 180
           + +L SA RDCV EDRNS+VAFQA+TGVEVCTFKL+VTNA+SLLDD DSAKLEAEARLS+
Sbjct: 130 QELLKSAGRDCVLEDRNSIVAFQAKTGVEVCTFKLIVTNASSLLDDGDSAKLEAEARLSN 189

Query: 181 LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
           LIRSFT LNGV KEA+ QL   RQK+A+AVMDSLSSL+ FEQ IKGCIEV
Sbjct: 190 LIRSFTLLNGVVKEANLQLASQRQKIADAVMDSLSSLDKFEQGIKGCIEV 238

[Close]

BLAST of Spo20780.1 vs. NCBI nr
Match: gi|870868497|gb|KMT19322.1| (hypothetical protein BVRB_1g013260 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 317.0 bits (811), Expect = 2.700e-83
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1


		  
Query: 1   MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS 60
           M+TLTL LSSTLSS+ ISPP P N K   S S  +S   ISRR T+ LL+I+PFLL +P 
Sbjct: 1   MMTLTLCLSSTLSSTSISPPLPSNLKTPISHS-NNSQVFISRRYTSFLLSISPFLLSLPP 60

Query: 61  PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI 120
           PAFAF++GISGPKDWLREQKKKSIKY+LAPIDASQ+ILRH YQLL+A+D+    KDLEEI
Sbjct: 61  PAFAFNIGISGPKDWLREQKKKSIKYLLAPIDASQQILRHVYQLLLAEDNVLNPKDLEEI 120

Query: 121 RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD 180
           + +L SA RDCV EDRNS+VAFQA+TGVEVCTFKL+VTNA+SLLDD DSAKLEAEARLS+
Sbjct: 121 QELLKSAGRDCVLEDRNSIVAFQAKTGVEVCTFKLIVTNASSLLDDGDSAKLEAEARLSN 180

Query: 181 LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
           LIRSFT LNGV KEA+ QL   RQK+A+AVMDSLSSL+ FEQ IKGCIEV
Sbjct: 181 LIRSFTLLNGVVKEANLQLASQRQKIADAVMDSLSSLDKFEQGIKGCIEV 229

[Close]

BLAST of Spo20780.1 vs. NCBI nr
Match: gi|1000986460|ref|XP_015575030.1| (PREDICTED: uncharacterized protein LOC8288928 [Ricinus communis])

HSP 1 Score: 238.8 bits (608), Expect = 9.400e-60
Identity = 132/227 (58.15%), Postives = 165/227 (72.69%), Query Frame = 1


		  
Query: 12  LSSSPISPP-FPPNPKHSNS------FSYKSSNAVISRRGTAILLTIAPFL-LQIPSPAF 71
           L+S+ ISPP FPP P  SN         +  S   ISRR  A+L  +A    L  P+PA 
Sbjct: 7   LTSTSISPPPFPPKPSISNHNLLSKCHHHLPSPIEISRRDAALLSVLALVSSLSQPAPAT 66

Query: 72  AFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEIRGM 131
           AF +GISGPKDWL+EQKKKS K++LAPIDAS+EILR AY LL A +S +  K+L+E++ +
Sbjct: 67  AFSIGISGPKDWLKEQKKKSSKFLLAPIDASREILRSAYLLLTASESGYSNKELQEVQTL 126

Query: 132 LTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSDLIR 191
           L SAARDCV +DRNS VAFQA TGVEVCTF+L+V NAASLLD  D  KLEAE  L+DLIR
Sbjct: 127 LRSAARDCVPQDRNSFVAFQANTGVEVCTFRLIVKNAASLLDKKDPVKLEAEVMLNDLIR 186

Query: 192 SFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
           SFT L G+A EA+  +  DR+++A+A+M +LSSLN FEQ +K C+EV
Sbjct: 187 SFTSLTGLANEANILIASDRKEIADALMKTLSSLNKFEQGVKDCLEV 233

[Close]

BLAST of Spo20780.1 vs. NCBI nr
Match: gi|802593280|ref|XP_012071850.1| (PREDICTED: uncharacterized protein LOC105633793 [Jatropha curcas])

HSP 1 Score: 235.0 bits (598), Expect = 1.400e-58
Identity = 122/193 (63.21%), Postives = 150/193 (77.72%), Query Frame = 1


		  
Query: 40  ISRRGTAIL--LTIAPFLLQIPSPAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEI 99
           ISRR  A+L  L + P L Q PSPA AF +GISGPKDWL+EQK+KS K++LAPIDAS+EI
Sbjct: 49  ISRRDAALLSFLALVPLLSQ-PSPALAFSIGISGPKDWLKEQKRKSSKFLLAPIDASREI 108

Query: 100 LRHAYQLLMAKDSSFEQKDLEEIRGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVV 159
           LR AY LL A +     K+LEE++G+L SAARDCV ++RNS VAFQA TGVEVCTF+L+V
Sbjct: 109 LRSAYLLLTANELEHTDKELEEVQGLLRSAARDCVPQERNSFVAFQANTGVEVCTFRLIV 168

Query: 160 TNAASLLDDDDSAKLEAEARLSDLIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSL 219
            NA+SLLD  D  KLEAEA L DLIRSFT LNG+A E D Q    R+KVA+A+M+++SSL
Sbjct: 169 KNASSLLDKKDPTKLEAEAMLDDLIRSFTSLNGLANEPDIQAASSRKKVADALMNTISSL 228

Query: 220 NNFEQSIKGCIEV 231
           N FE+ +K C+EV
Sbjct: 229 NKFEERVKDCLEV 240

[Close]

BLAST of Spo20780.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAQ1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_205960 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 9.600e-120
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


		  
Query: 1   MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS 60
           MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS
Sbjct: 1   MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS 60

Query: 61  PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI 120
           PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI
Sbjct: 61  PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI 120

Query: 121 RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD 180
           RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD
Sbjct: 121 RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD 180

Query: 181 LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
           LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV
Sbjct: 181 LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 230

[Close]

BLAST of Spo20780.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D0K4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g013260 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.900e-83
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1


		  
Query: 1   MVTLTLSLSSTLSSSPISPPFPPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPS 60
           M+TLTL LSSTLSS+ ISPP P N K   S S  +S   ISRR T+ LL+I+PFLL +P 
Sbjct: 1   MMTLTLCLSSTLSSTSISPPLPSNLKTPISHS-NNSQVFISRRYTSFLLSISPFLLSLPP 60

Query: 61  PAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEI 120
           PAFAF++GISGPKDWLREQKKKSIKY+LAPIDASQ+ILRH YQLL+A+D+    KDLEEI
Sbjct: 61  PAFAFNIGISGPKDWLREQKKKSIKYLLAPIDASQQILRHVYQLLLAEDNVLNPKDLEEI 120

Query: 121 RGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSD 180
           + +L SA RDCV EDRNS+VAFQA+TGVEVCTFKL+VTNA+SLLDD DSAKLEAEARLS+
Sbjct: 121 QELLKSAGRDCVLEDRNSIVAFQAKTGVEVCTFKLIVTNASSLLDDGDSAKLEAEARLSN 180

Query: 181 LIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
           LIRSFT LNGV KEA+ QL   RQK+A+AVMDSLSSL+ FEQ IKGCIEV
Sbjct: 181 LIRSFTLLNGVVKEANLQLASQRQKIADAVMDSLSSLDKFEQGIKGCIEV 229

[Close]

BLAST of Spo20780.1 vs. UniProtKB/TrEMBL
Match: A0A067L327_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04429 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 9.400e-59
Identity = 122/193 (63.21%), Postives = 150/193 (77.72%), Query Frame = 1


		  
Query: 40  ISRRGTAIL--LTIAPFLLQIPSPAFAFDLGISGPKDWLREQKKKSIKYVLAPIDASQEI 99
           ISRR  A+L  L + P L Q PSPA AF +GISGPKDWL+EQK+KS K++LAPIDAS+EI
Sbjct: 49  ISRRDAALLSFLALVPLLSQ-PSPALAFSIGISGPKDWLKEQKRKSSKFLLAPIDASREI 108

Query: 100 LRHAYQLLMAKDSSFEQKDLEEIRGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVV 159
           LR AY LL A +     K+LEE++G+L SAARDCV ++RNS VAFQA TGVEVCTF+L+V
Sbjct: 109 LRSAYLLLTANELEHTDKELEEVQGLLRSAARDCVPQERNSFVAFQANTGVEVCTFRLIV 168

Query: 160 TNAASLLDDDDSAKLEAEARLSDLIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSL 219
            NA+SLLD  D  KLEAEA L DLIRSFT LNG+A E D Q    R+KVA+A+M+++SSL
Sbjct: 169 KNASSLLDKKDPTKLEAEAMLDDLIRSFTSLNGLANEPDIQAASSRKKVADALMNTISSL 228

Query: 220 NNFEQSIKGCIEV 231
           N FE+ +K C+EV
Sbjct: 229 NKFEERVKDCLEV 240

[Close]

BLAST of Spo20780.1 vs. UniProtKB/TrEMBL
Match: V4SKH3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002305mg PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.000e-57
Identity = 129/224 (57.59%), Postives = 159/224 (70.98%), Query Frame = 1


		  
Query: 18  SPPFPPN---------PKHSNSFSYKSSNAVISRRGTAIL--LTIAPFLLQIPSPAFAFD 77
           S  FPP          PKH N+         ISRR   +L  LT+AP L  +P PA AF 
Sbjct: 20  SSNFPPKLPISKQNLLPKHQNNQQSYRIEFEISRRDAFLLSFLTLAPSLA-LPDPANAFS 79

Query: 78  LGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEIRGMLTS 137
           +GISGPKDWL+EQKKKS K++LAPIDAS++IL  AY LLM K S +  KDLEE++ M  S
Sbjct: 80  IGISGPKDWLKEQKKKSSKFLLAPIDASRQILNSAYLLLMDKQSDYTNKDLEEVQKMFRS 139

Query: 138 AARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSDLIRSFT 197
           AARDCV ++RNS VAFQA TGVEVCTF+L+V NA+SLLD+ D AKL+AEA L DLIRSF 
Sbjct: 140 AARDCVPQERNSFVAFQANTGVEVCTFRLIVKNASSLLDNKDPAKLQAEAILDDLIRSFA 199

Query: 198 FLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
            LNG+A +   +L   R+K+A+A+MD++SSLN FEQ IK C+EV
Sbjct: 200 SLNGLAGDTAIELSSRREKLADALMDTISSLNKFEQGIKDCLEV 242

[Close]

BLAST of Spo20780.1 vs. UniProtKB/TrEMBL
Match: B9R7U3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1594350 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.400e-57
Identity = 132/237 (55.70%), Postives = 165/237 (69.62%), Query Frame = 1


		  
Query: 12  LSSSPISPP-FPPNPKHSNS------FSYKSSNAVISRRGTAILLTIAPFL-LQIPSPAF 71
           L+S+ ISPP FPP P  SN         +  S   ISRR  A+L  +A    L  P+PA 
Sbjct: 7   LTSTSISPPPFPPKPSISNHNLLSKCHHHLPSPIEISRRDAALLSVLALVSSLSQPAPAT 66

Query: 72  AFDLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKD----------SSFE 131
           AF +GISGPKDWL+EQKKKS K++LAPIDAS+EILR AY LL  +D          S + 
Sbjct: 67  AFSIGISGPKDWLKEQKKKSSKFLLAPIDASREILRSAYLLLSERDLFSLLIAASESGYS 126

Query: 132 QKDLEEIRGMLTSAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLE 191
            K+L+E++ +L SAARDCV +DRNS VAFQA TGVEVCTF+L+V NAASLLD  D  KLE
Sbjct: 127 NKELQEVQTLLRSAARDCVPQDRNSFVAFQANTGVEVCTFRLIVKNAASLLDKKDPVKLE 186

Query: 192 AEARLSDLIRSFTFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
           AE  L+DLIRSFT L G+A EA+  +  DR+++A+A+M +LSSLN FEQ +K C+EV
Sbjct: 187 AEVMLNDLIRSFTSLTGLANEANILIASDRKEIADALMKTLSSLNKFEQGVKDCLEV 243

[Close]

BLAST of Spo20780.1 vs. TAIR (Arabidopsis)
Match: AT5G42765.1 (INVOLVED IN: biological_process unknown)

HSP 1 Score: 197.2 bits (500), Expect = 1.100e-50
Identity = 111/225 (49.33%), Postives = 152/225 (67.56%), Query Frame = 1


		  
Query: 16  PISPPF-------PPNPKHSNSFSYKSSNAVISRRGTAILLTIAPFLLQIPSP---AFAF 75
           PIS PF       PP P  + +        +ISRR   +LL+ A  LL   SP   AFAF
Sbjct: 6   PISQPFFSSNTKPPPPPPIAAAQISDHLPQIISRRDATVLLSSATSLLLTLSPTNPAFAF 65

Query: 76  DLGISGPKDWLREQKKKSIKYVLAPIDASQEILRHAYQLLMAKDSSFEQKDLEEIRGMLT 135
            LGISGPK+WL++QKKKS +++LAPIDA+++ L+ AY L +  +S + +KDLE ++ +  
Sbjct: 66  SLGISGPKEWLKDQKKKSSRFLLAPIDATRQALQSAY-LSLTSESDYTEKDLENLQNLFK 125

Query: 136 SAARDCVTEDRNSLVAFQARTGVEVCTFKLVVTNAASLLDDDDSAKLEAEARLSDLIRSF 195
           S+ARDCV ++R+SLV FQ+++GVEVCTFKLVV NAASLLDD D  KLEAE  L DL+RSF
Sbjct: 126 SSARDCVPKERSSLVDFQSKSGVEVCTFKLVVKNAASLLDDKDPVKLEAENILDDLVRSF 185

Query: 196 TFLNGVAKEADFQLVPDRQKVANAVMDSLSSLNNFEQSIKGCIEV 231
             L  +    D  L  DR+KVA+ V +++S L+ FE+ +K C+E+
Sbjct: 186 GSLIVLTNGVDMNLPSDRKKVADGVTETISYLDKFEKGVKDCLEI 229

The following BLAST results are available for this feature:

BLAST of Spo20780.1 vs. NCBI nr
BLAST of Spo20780.1 vs. UniProtKB/TrEMBL
BLAST of Spo20780.1 vs. ExPASy Swiss-Prot
BLAST of Spo20780.1 vs. TAIR (Arabidopsis)

BLAST of Spo20780.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902111673\|gb\|KNA03768.1\|	1.4e-119	100.	hypothetical protein SOVF_2059...	[more]
gi\|731314133\|ref\|XP_010684332.1\|	2.7e-83	73.4	PREDICTED: uncharacterized pro...	[more]
gi\|870868497\|gb\|KMT19322.1\|	2.7e-83	73.4	hypothetical protein BVRB_1g01...	[more]
gi\|1000986460\|ref\|XP_015575030.1\|	9.4e-60	58.1	PREDICTED: uncharacterized pro...	[more]
gi\|802593280\|ref\|XP_012071850.1\|	1.4e-58	63.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo20780.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QAQ1_SPIOL	9.6e-120	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D0K4_BETVU	1.9e-83	73.4	Uncharacterized protein OS=Bet...	[more]
A0A067L327_JATCU	9.4e-59	63.2	Uncharacterized protein OS=Jat...	[more]
V4SKH3_9ROSI	1.0e-57	57.5	Uncharacterized protein OS=Cit...	[more]
B9R7U3_RICCO	1.4e-57	55.7	Putative uncharacterized prote...	[more]

BLAST of Spo20780.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo20780.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G42765.1	1.1e-50	49.3	INVOLVED IN: biological_proces...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36398	FAMILY NOT NAMED	coord: 35..230 score: 1.0
None	No IPR available	PANTHER	PTHR36398:SF1	SUBFAMILY NOT NAMED	coord: 35..230 score: 1.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0015031	protein transport
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006412	translation
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010239	chloroplast mRNA processing
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0042793	plastid transcription
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0009537	proplastid
cellular_component	GO:0009513	etioplast
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0009501	amyloplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0042586	peptide deformylase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10106	0.74	Barchart \| Table
Spo08824	0.70	Barchart \| Table
Spo18184	0.69	Barchart \| Table
Spo11238	0.68	Barchart \| Table
Spo06775	0.67	Barchart \| Table
Spo24016	0.66	Barchart \| Table
Spo09777	0.66	Barchart \| Table
Spo05841	0.66	Barchart \| Table