Spo20640 (gene) | SpinachBase

Overview


Name	Spo20640
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Conserved hypothetical plastid protein Ycf54
Location	chr3 : 51650409 .. 51660379 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGGTCTACAACAACACGTAATTAAGTAAATTAACTCAATTCTAGGTGCTCATTTCGTTACTTTGCTTCAGAATTTCTTATCAGTGATGGAAATAACTTGTCTGATACTTCATATCTCATCACCAAATTAGTGAATAAAATCTGTATGTTTTCCAGTTTTCGGTTCATGTTCTCTAACCTCATTGTTTAATTCTTTAACAATGGGCTTAATTTTCCTTTGTAATGAACTTGACATTTCTCTCTGAAAATTCAGTACTGAACTACTGCTAGTACATCAGTATCCAAAGTAGAGCTGTCAAAAATTGACCCGACCCGAGAAACCGACCTGAACCGACCTGTATTTTTAAGGACCCGGACCCGACCCAAGACTCGGAATTTTGTTAAAATAGGAAACCCATAACCTGACCGTATCAAACCCGTTAAAACCGACGACCGATTTCGACCCGTTAATGCATAAACCGGACCCGAACCTGACATCCGATCGAAATATAACCGATAACAAAGCTGAGTCAGCTTACCCGACCGAAAAATGACCCGAACCCGATTCAACACCCGATCCGATGTCAACCCGAAACCGATTATAACCCGATGAAACTTGTTATTGACTCAATTCGTGACAAACCATTTCCTTAATTTACGCGACCTCTTGACAACCCGATTTGTCATTGACCTAACTAAATAATAACTTAAATCAAGTTAATATTATTTTTTATAATTACATAATCTAGAACAAGTGAAAAACGTTAAACCAAATTTAACCAAATTTATAAAAGTTAATTATAAGGTTAAAACTTGACTAGACCTGATAGCTATCGTACCCGGTCTTAACCCGTGTCCGATGGTGAACCTGACCTGAATTTTAACCGACGCGATAATTATCCGATCCGAACTTGACCCGACTCGTTAAGACCCGAACCTGTAATTGTACCCGACTAGAAAAAGACCCGACCCGAATCCGAACCGAACCCGACCTATACCGAAATGGAAAAATAACTCGACATGACCCGACAAACTTTCAACCTGACCGAACCCGACCTGCACCCGGTGATAAAATGACCCGGCACGACCCGACCAGATCTTGACCCGTGACCCGAGATGACCAGACCCGGACCCGACTCGAGTAACCGTTTTGACAGCAGGAACTATCACCATAAGATGGTACTTTGACTAGATCCAAAGTACCATCTTATGGTTGTACTGCAGGAACTTTCAGAAGTACTACATCTTTTGTTAAGTACTGCTAATTTAAGAAGGTTGTTTTTTTGTGTTTTAAGTTCCAGCATACACAAACTAGTCATTCTTGTGGTACTTCTGTTACGCCTCGTGTATATATAGAGCTTGGTTATTGCGGTAGGAAATGCAACAATAACTTCGGGTTACTCCACAGTTTCCAAAAATTCGGTTCATATTAGGTCATACAGAGTGGGATCCGATCCTATGTTTTAGTTACCGGTCTTAAAAATAATATTGTTGGTAAGATTATTACTCTGTATTTTTCTATGTGTTGTTCTTTTGATTATTTTGGGAGGGATAGAAGCTGGGGAAGAGGCAGAGCATGAGATGGATCAATCAACAATGTAGATTATTGATGTTGTTGCTCCTCCCATGCACTGTCTCTTCCCTGGCATCTCCTTCATAGTTTCTCTTCTCTTGAATTTTCCTTTCCAAATATAGTAAAAAAAAAAAAGACTACCTCCGTTCTCGAATGTTAGTCATATTTGTAATCTTAACATTGTTCACAATTGAAAACTATCTTCTAATTTCTTTCCCAATGTATGTTTGAAAACATATTCATGTTGGATCTTGCTTTTTTTTGTCCCAATGTGTTGTTTCACAATATTAAATTTTTACGACTTTTCAGCATAGGGTATTTGGAGATATTTACGTTCAAATATTGAGCTAAAACAGGTGGTAAAGTAAATCTAACTGTGGAAGGAGTAGTAACATTGGCGGTTCCGACAATGCATACCCTGGACCTGACGATTGGAAATTCAACTACTTTTGCCGCCTTTTCAGCAGCTTTCAGCGTTAAGTGTAGAATAAGTTCAACTTGTTTAGGTTTTTAGATGATAAAGGAAGAAGAAAGGGGAAAAAAGAGGAGGAAGATGTTTTAGGGTTCTACTTCAAATAAAAGTGGTTTGTGTTTCTTTTTTCTTTTTTTCTTTTTTATTTTTTACCAATAGTTGACCGAAGTTAAAATATAACGAAAAAGTTCATCGTAATAACATTATAAGTGTATTGTTGGCAAGTCAAGTTTTATTTAGTGTATCGTTGGTAGAAGTCAATAGTACAAGTGTACTAATGGGAAATTTCTAATATTTTATTTGACATATTTTAATTTTCTTTTTTCCTCCCGAAGTCCTCCAATTTTGGGAGGAAAAGAAAAACTCGGGAGGAAAAGAAACTGAACCTTTTATAAAGGGAGCTTTATTTACAATTTCTTTCCTTTCCTTCCACTTCTCATATAATTTTTGGAACCAAGCACACGAAACATTATTATTTCTTTCCTTTTTTTTTTCTTCCTTCTAATTCCTCCCAACCAAATGCTCCCTCTGTATTTTATTAGGGGTCAAATTTACCATTTTCGGAAGTATTTTATTTGGAGTCACACTTCCATTTTTAGTTATTTTTCTAACCTACACCGTCTAATTAAATAATATATCTAATTTTACCTTATGACCCACCACCGCATTAAACAATTAATTTTATAAACCCCTCACCCTCCTTCCTCCAAAATCTAATGGTTCCCACTCATTTTATTTGATTGAAATATTTAACACAACCCCATTTGATTTATTATTTTATTCATTTTTTCTTAATGGAAGTGGGGATAACTCAGTTGGTTAGAGCTTCCCTCCCGATTCTAGAATCGATTCTCATCCCCGCCATTATTGCTCATTTACACCAAAAAAAAAATACCGTTTTTTCTTAATACTCGTATCCTGCCATGTATAACTTCTATTTAAATACTGACGGAGTAAACCCTTAATGATACTCATCCAAGTAAATATGATTTGGTGAAACAAAAAAACCCCTTTCTCTACTTCTGTCGGATACCCATAATAAGGATAAATGATAAGAAACCAGGATAAGATGTGATTTCCATTTTACAGAAAACTCAAGCAAACAAGCACACAAGCACACAAACTAGTTTAACTCCAAAAAAAACCAATCAAAATTGTCATCATCAAAGGTATGAATTCTTGATTCTATCAACCCAAATTCTCAATTGATAATTCTCAATTCAAACAATTAAAAACTTTGGTTTATTAAATTTGTGGGATGCTCAATTTCAGGTATTGGTTTATGCAAGTGTTAGATCAGCAAAAATGGTAGTTCTGGCAAGCAGCTGTATAACCATGAGTAGTACGACCACCCTTCTTCTTCATTCTCAGCAGCCGTACAAACCCTTGCTTCTTTTGCCAAGCAGCTGTAGAACCACCGCCACCGCCACCGCCACCGCCGCCGCTTTCCGTTCTCTTTCTCTCTCCTCCTTATCAATTGGTGGTTCTTCCTCCTCTCTCAGAACTCCTGTTTCCGCCGTCGCCATGGACACCAGTCAGCCTAGCCCTTCTTCTGATCAGGTTTGCTTCTGCTACTTTGCAATTCGGGTTTTAGAGGTATATTTCATTGAAGTTTTTGACTTTGGTGTCCATAGTTTTGACATAATTCCACTTTGGTACAGTATTTTCGTTAAGGCTCAGTTTGTTGGGTGTAAAATATTTCCAGTGTAAAATGAATTTCATGGAAAACAATTTACAATGGAAAACACAATTCCAAAACTAGTTTCCCGTTAATTGACGTAATTTGGATTATACACCCGAATGAACATTCTTTGAAAATCTAATGAACATGGAGAATGATTTCAATGTACAGGTACAAGTGAAATATTTGAACGATATGTTCTTTGGATTTGAACTATATGATCATTTGTTATATGTTCTTTGAATATGAACAATATGTTCTTTGTATTTGAACGATATGTTCATTTAAAAATAGGGTGCACAGTGAGCATTGTACAGCCGGTGTAAAAACCATATTTTGGTTATTTGGTTCCATGCCGTGTGAGGAATGTACAAGAGAGATTAGGAAAAGGAAGGAAAACAGTTTTCCCTTCCTTTCCAACAATGAGAGTGTAATTTTACTCTTAGGGAAAATGGTTTTACACTACTTTGCAAATCAAACAATGTAAAATTGAAAATAGAGGGAAATAGTTTTTCACGAAAAAAATTACGCCCTACCCAACGGAGCCTAATACCTCAATGAATTTTGATTAGAGTTGTACAAATAACAAATTTTCAACTTTGGAGTCCGGAGGTTTGACATAATTCCACTTTGTTACCGTGTTTTCACTGATTTCTTACTAAATTGTAAAATTGATTTTTGATAAACTTAGTTTTAATTATGAATGAACAAAATTTGATTTATTGACCCTTAACCATCACAAATTAGTTCGTTTATGGAAAACAAGTTGAAGCCAAGTTGGTTATTTTTTTTGGAAATCGTCTTTTCAAAAACTCTCACGTACTCTTCACGTGGGTACCGAGTAGAAGGAGGTTTTGGTTAGTGTATGAGCGGACATCGCCTAGAGAATTTGTAATAAGTTTTCTTCGTAAATAGGAAAGTGAGGAGTTATTTAGCCGACAAAACATGGGAAGATAATTCCGCTTGGTATAAATTTCGTATTTTCTACTGTTAACCAAACAATCTTCTACCGTCAACTTAACAATTTTGTGTACATTTGAATAGAACTACGAATATAGTCGCTTAAGCGATTATATCACTGTTGCCTTTGGTCAAAAGCTTAGTTGAATAATTTCATCCATCAAAAAGATGCTTTAATAGCCAAATTGTATGAGATAAATGGAGAGGAACTAGCACACCAGGTATTCTAGTAAATCAGCATTTCTTATTGTCGATGTCCCCAAGTCAATCAGCATTTCTTGTTGTCGATGTCTCCGAGTCAATCAGCATTTCTTATTGTCGATGTCCCCGAGTCAATCAGCATTTCTTGTTGTCGATGTCACCAAAACGGCTACACAACTAATACAAAGACTCGTGGAATCAACGTTCTTTGAATGTTACAATTGATATCGTTGTCCGTATTCAGAAAATATTGAAGGCTTCTGATATTAGTCGGATCAACTTTAGGTCTATTTATTCACTTACCACTCAAAAAAGCAGATATAACTTATCTAAGGATGTGAATTTGCTGCTCGTCATTCTTCCTTTAGAATTAGCCCTTGACTTAATCAAATGAAATTTTTGAGCCCTTATGTTTGAAATTGTACATTGTGTTTGAATAGTCTGAAAGAGGTACATGGATAGCTGAATCGAAAGTCTGAATAGATAGATGAGCACATTAGTTTTTTTTTCCCTTTCTGATAAAGACCAAAGGATGAGTCAGTGGGGCAACAGAATGTGTAGTTTGCACACTCTAGCCATTTTGTGATGTCACATTTGGAAACTAAATATGTGACAATTGAAACTAACGTTGTAATTGTAATGCACAAAATTTGCATATCTTTAACTGTAACGAACATATTTTTATTATTGTATTTGAGTTATGTTTCTCAAAGCACTAAAGCAAGTTGAAAAGATAATCTGATCACTCAAAGTATCCTTATTGCTTAAGAACTATAATAAATTGTTGCCTTGATTTTCGTTCATGGTTCAAAATCAGTGCAATATATGATCATACCAACCAGGAGAAAACCCTCCCTCCGTCGCTGCTACAATCAAAACAACTAAATTGCCTCAGAGATACACAGAAGACGACGAGTCAGGTTGACCCCGATGATGATACAACTCCTTGGAGTGTGCATAGCTACAATGTAACGACACTCTTTAGTCATAGATTAGTGAATACATGAGCAATTTGTCGCTAGACTCACTTGTCACGCCTCGTGTATTAGTTACTACTCTTTAAGTGAAGAAGGAAGGTTGAGTTGGAAGAGAACACGAGTGTTTTAGGTTGTGATTTTTTGTATTAAACTCTCAACTTGAATGTACAAATGAGACTTTATGCCTATTTATAGGTCACCATCCCGTAAGTCTAGAATATTCACACCCTATAATATTCTATACAATTCCTACAAGGAAATGTATACAAGTTTCTAGACCGTTCCCACCTTCAAGGGAACTTCCTATACAAGGAGGTACCTAGATCCTTCTAGAACCTTCAAGCTTCATCCATGCTAGAATGCCCAAGAACACCCTAGAAGGCTAGAACATTCTTGAAGCTTCCAGGCCAAACTGCTATTGCATATCGGGCTTTTGTGAGCCTGATCTGGGAAATCCAGCACAACCATCATCTTCAGTGGGTCAAAACTGATGGGACCCCCAAGTAAACCGAGCATTTGGCCCATTATTATGTTAAAGAAATGTGGGTGTTTACTTGAAATTTATGCCTTATTCAAAATAAAGCTCTTTAGGGGGAGAGCTGCTCCTGCACTGCCCATGGGCGCCCCTTAGGCCACCTCATTACCCAGTGATGCCAAGTCACGCATACGCCAATGCAATGGTGACTGGTGAGAGAGACGACCCGTGACAATCTGCTCATATGTTTTGTTCCCACATTGCACGTTCAGCACTTTACGTATATAGTAATATATCAACAAAAACATCTTTTGCTGAAATGACACCCAAAAAAGATGTTCACGAGTCTCCACTTCCATATTGCAGAATAGGCACATTTGACTGCACAGATCTGGCCAGTATGATTTGGGCCATTTGGCAAGTCTGTATTTTCTGTAATCTACGATGAACTGCAAATGTGCAGTTCGAGCAATGCTGTTGCTTAGCATTGCTTGGAAGTTGTCCAAGTTGGAACTGAGAATTTATAAGCTCTGTTGCTTGAGTAGTTGCCAACTCAGCCAACAGTTTGACATTGGTGTAACTGGAATCCAGGGTGAAGCTCCTCTATGATTTTACCTAAACTCTTCCATACCTAGCTTGCTTTTTTGGGTAGAGAACTAGTTATTTGCCTATGCAATGCCCCAAATCATTACATGTAATAGGGAGTAATAATTTTTTTGCAGAATGCAAATGTTGAATATAGTTTCTTGGGGGCATAATAGGTTGATGAGTAATAAAAGTATAATTGATTGATTATGTTATAAGTATGATGGATAAATAATGCTAAACATGTATGCGTTGCTCAAATTTCCTTTACATGATATTGTTGGTTGGTGTGATTAAATAAACACTAAAATTACAAACATAAGTTAGTAATTTCTTTGCTTTTTAAGTGAGAGGTTGTGAGTTTGAGTCTTGATTGACCATTGTTTTTGCGAGGAGGATTGGATGAACATTTGAAATGACACATGTGATGTGACACCATGTAAACGCAAGGGGAAGGCGGTATCACGTGGTGGGATAGCTTATCTTCACCTTGGGCTTTAGGAATAGTATAGATAGATGTTCATTTGTTCCAATGTTTCTGTTCCCTTTATTCTTTGCTTCCTACCCTTTTTACCATTGCAGTTATATACTGTATATCTTGTAGTTTTTTGGTGCACAAATATGGAGATTTGGGTTTTTTTTACAACATGACACGTTTTAATGTTTTATTTTCTAGCACTGCTTAATGATCCTAACCTGCTTTAGCTTGCCTGATCCAATCGCGATTTTCTCTTCATATGCAGGATCAAACAACTAAAAAGTACTATTTTGTGGTCGCAAATGCAAAGTTCATGCTTGACGAAGAAGAGCATTTCAAAGAGCTTATGGAAGAAAGGCTTCGCATGTTTGGAGAGCGTAAAATGGAACAAGACTTTTGGCTTGTTATTGAACCAAAGTTCCTGGATAAATTCCCTAATGTCACCAAGAGATTAAAGAGACCTGCTGTGGCTTTGGTCTCAACAAATGGCCCATGGATCACGTAAGAGGCACTTCACTTATGTTTTTCATTTCCTTCAGAATAGTCAAAATTATAATTTTGGTACTTGTTCTTACTCTTAAGGCCCGTTTGGTAGCCGGTAATAAATGGTGGGAATGGGAATAAATTTAAGTGTTATTTGACAAAAAAATTAACACTCCCCATATGGTAATGGATGATAATGGAAATTTATAAAGAAAAAGAGATAATTTTGAGTAAACTAGCATTACCATGGGAATGAGTATTGATATTCCTTACAAATTTACATCAAATTTATTCCCTTTGACACCATTTATGGCCGGCTACGAAATGGGCCATTAGTTGATATGTTTGTCATGTTTGCGTGATTGGTATGCGTGATTTAATCGGCTATTTGATACATAGGTAGTGCCATACTGGCATGTACTCGTACTTGACATCAGTAGCATTAGCCTTTTGAATGGAGAATAAGCATGTTTTCATGACGAGTTCCCCTCTTCTTGTTATGTGACTTTATGTGTGATTTTAGTTGGATTATGACATTATGTTATACTTTTATGCGATGTTGTTAGATTTTAATGTGAGGAATTCCAATTATCTCAAGGAATATTTCATATTTTAATTTATCTACAAGTATTTCTTGTAAGCACATAAATTAGGATATTAGAAAGAAGGGGATTGCTCGAATGTGAAATTACATATTAGACGCACGAATTTTTGGGAAGAAACCATTTTAAATAATTGTGGATTTGCCTTTCCTCCTAGAATGCGTAGAATCCATGACTTTCTTCCAGTTAGCTTTTCGTTCTTGCTTGTGTTAAGTATAATGCCGTGTTACAGATTTGCGAGTTCGCATGCTTTATACTCAGTATGTTGGAGACTGGAATGAGTTGCTTCTGAACATGCTGTTATCCTGCTAGGGCAAAAATTAAGAGTTATCGTCTGCTTTCGCATTGCCTCCTCTCCTCTGTGGCTCTATTGTGCAGACTCAAAAATCAAAACTTCCTGTCGTGCTGAAATCCAATCCTTACCTCTCCGTTTAAAGTCTTTGACATTAATGCTTGAAACTAGGGGTGGCAATTCGGGTCAATGGGTTAGGTTCGGGTTTGGTTTCGGGTTGTGTAAAAAACTATCAGAAATATTGTAAAACTTAATATTACTACAAAATATGATAAATGGGTCAAATCGGGTCGATTTCAGGTGATTCGAGTTCGGTTCAGGTCAGGTTTCTCTCAGTAACTTCAGGTTGGGTTCTCGGGTCGGGTCAAGGATTGAAACACTACCAATTCCTAACTATAGTACTCTGATACTCATTTTTGTTGATATGTTTTTTGTTACTTTGTATTATTCAGAATTCGACCTCATTCCACAATATGTCTTGGCAGGTACATGAAACTGAGATTAGACCGTGTTTTAGCCGAAAGCTATGAAGCCGACAGCTTAGAAGAAGCATTGGCCTCAAATCCCACTAAAATAGAGTTTGAGAAGCCGGAAAAGTGGGTCGCCCCATATCAAAAATACGATTATGGCTGGTGGGAGGCCTTCTTGCCTCCTGCATCCCAAGCTTGAAGTACAATGCCAACAAAATTCTGAGAGTTCTACTTGAAAGAACGATAATATTTAGCACGTATTCACATATATGGTTGAGGTTCTTCGGGTACCAAACCCTTCATGGGTCGAACAAAAGACTTGTTACCGTCTGATCTGGAAAAAACGGGATGGGTTATGAACCGGGTGCAATACAGTAGCAGCAGCGTAAAGCTCGTCGTTTGAGTACTGTGTGTTGTGTTGTGTTGTGTTGTTAATTGGTAGATTGTAGGTGTTGTTGTTATGTTTAGGTGTTGTACTGATTGTTTGAGGTTTTGCCCTCCATTTCTTGTATGCAGAAGATGAGGATTTTTTCAAAATATTAGGTAAATAGTGGAGTAAGTTATTAAGGAGTACTTATTTAGTATATGAGAATGCGCTCTATTCATCTATTTTAAACTTATTTTCCTGAACTTATTTATCAAATATTAGGTAAATTAGTGGAGGACAAGTTATTGAGGGATCTAGGTTATTACGGAGTACTTATAGTATATCATGGTGCTTTTGATTCACCTGATTCAC

mRNA sequence

ATGCTAGGTCTACAACAACACTTTAACTCCAAAAAAAACCAATCAAAATTGTCATCATCAAAGGTATTGGTTTATGCAAGTGTTAGATCAGCAAAAATGGTAGTTCTGGCAAGCAGCTGTATAACCATGAGTAGTACGACCACCCTTCTTCTTCATTCTCAGCAGCCGTACAAACCCTTGCTTCTTTTGCCAAGCAGCTGTAGAACCACCGCCACCGCCACCGCCACCGCCGCCGCTTTCCGTTCTCTTTCTCTCTCCTCCTTATCAATTGGTGGTTCTTCCTCCTCTCTCAGAACTCCTGTTTCCGCCGTCGCCATGGACACCAGTCAGCCTAGCCCTTCTTCTGATCAGGATCAAACAACTAAAAAGTACTATTTTGTGGTCGCAAATGCAAAGTTCATGCTTGACGAAGAAGAGCATTTCAAAGAGCTTATGGAAGAAAGGCTTCGCATGTTTGGAGAGCGTAAAATGGAACAAGACTTTTGGCTTGTTATTGAACCAAAGTTCCTGGATAAATTCCCTAATGTCACCAAGAGATTAAAGAGACCTGCTGTGGCTTTGGTCTCAACAAATGGCCCATGGATCACGTACATGAAACTGAGATTAGACCGTGTTTTAGCCGAAAGCTATGAAGCCGACAGCTTAGAAGAAGCATTGGCCTCAAATCCCACTAAAATAGAGTTTGAGAAGCCGGAAAAGTGGGTCGCCCCATATCAAAAATACGATTATGGCTGGTGGGAGGCCTTCTTGCCTCCTGCATCCCAAGCTTGAAGTACAATGCCAACAAAATTCTGAGAGTTCTACTTGAAAGAACGATAATATTTAGCACGTATTCACATATATGGTTGAGGTTCTTCGGGTACCAAACCCTTCATGGGTCGAACAAAAGACTTGTTACCGTCTGATCTGGAAAAAACGGGATGGGTTATGAACCGGGTGCAATACAGTAGCAGCAGCGTAAAGCTCGTCGTTTGAGTACTGTGTGTTGTGTTGTGTTGTGTTGTTAATTGGTAGATTGTAGGTGTTGTTGTTATGTTTAGGTGTTGTACTGATTGTTTGAGGTTTTGCCCTCCATTTCTTGTATGCAGAAGATGAGGATTTTTTCAAAATATTAGGTAAATAGTGGAGTAAGTTATTAAGGAGTACTTATTTAGTATATGAGAATGCGCTCTATTCATCTATTTTAAACTTATTTTCCTGAACTTATTTATCAAATATTAGGTAAATTAGTGGAGGACAAGTTATTGAGGGATCTAGGTTATTACGGAGTACTTATAGTATATCATGGTGCTTTTGATTCACCTGATTCAC

Coding sequence (CDS)

ATGCTAGGTCTACAACAACACTTTAACTCCAAAAAAAACCAATCAAAATTGTCATCATCAAAGGTATTGGTTTATGCAAGTGTTAGATCAGCAAAAATGGTAGTTCTGGCAAGCAGCTGTATAACCATGAGTAGTACGACCACCCTTCTTCTTCATTCTCAGCAGCCGTACAAACCCTTGCTTCTTTTGCCAAGCAGCTGTAGAACCACCGCCACCGCCACCGCCACCGCCGCCGCTTTCCGTTCTCTTTCTCTCTCCTCCTTATCAATTGGTGGTTCTTCCTCCTCTCTCAGAACTCCTGTTTCCGCCGTCGCCATGGACACCAGTCAGCCTAGCCCTTCTTCTGATCAGGATCAAACAACTAAAAAGTACTATTTTGTGGTCGCAAATGCAAAGTTCATGCTTGACGAAGAAGAGCATTTCAAAGAGCTTATGGAAGAAAGGCTTCGCATGTTTGGAGAGCGTAAAATGGAACAAGACTTTTGGCTTGTTATTGAACCAAAGTTCCTGGATAAATTCCCTAATGTCACCAAGAGATTAAAGAGACCTGCTGTGGCTTTGGTCTCAACAAATGGCCCATGGATCACGTACATGAAACTGAGATTAGACCGTGTTTTAGCCGAAAGCTATGAAGCCGACAGCTTAGAAGAAGCATTGGCCTCAAATCCCACTAAAATAGAGTTTGAGAAGCCGGAAAAGTGGGTCGCCCCATATCAAAAATACGATTATGGCTGGTGGGAGGCCTTCTTGCCTCCTGCATCCCAAGCTTGA

Protein sequence

MLGLQQHFNSKKNQSKLSSSKVLVYASVRSAKMVVLASSCITMSSTTTLLLHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSLSIGGSSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEADSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo20640.1	Spo20640.1	mRNA

Homology

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BLAST of Spo20640.1 vs. NCBI nr
Match: gi|902230999|gb|KNA22071.1| (hypothetical protein SOVF_037420 [Spinacia oleracea])

HSP 1 Score: 429.9 bits (1104), Expect = 3.200e-117
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1


		  
Query: 33  MVVLASSCITMSSTTTLLLHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSLSIGG 92
           MVVLASSCITMSSTTTLLLHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSLSIGG
Sbjct: 1   MVVLASSCITMSSTTTLLLHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSLSIGG 60

Query: 93  SSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMF 152
           SSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMF
Sbjct: 61  SSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMF 120

Query: 153 GERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEA 212
           GERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEA
Sbjct: 121 GERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEA 180

Query: 213 DSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQA 257
           DSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQA
Sbjct: 181 DSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQA 224

[Close]

BLAST of Spo20640.1 vs. NCBI nr
Match: gi|731339723|ref|XP_010681010.1| (PREDICTED: uncharacterized protein LOC104896030 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 302.4 bits (773), Expect = 7.700e-79
Identity = 171/230 (74.35%), Postives = 186/230 (80.87%), Query Frame = 1


		  
Query: 33  MVVLASSCITMSSTTTLL----LHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSL 92
           MVVLASS ++MSSTT ++    L SQQP KP  +LP S  TT           SLSLSSL
Sbjct: 1   MVVLASS-VSMSSTTAMMGSTFLCSQQPQKPFFILPKSRNTT----------HSLSLSSL 60

Query: 93  SIGG-SSSSLRTPVSAVAM--DTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELM 152
           SIGG   SSLRTP  AVA   DT+Q SPSS QDQTTKKYYFVVANAKFMLDEEEHF+E M
Sbjct: 61  SIGGIPPSSLRTPAVAVAATADTTQSSPSSTQDQTTKKYYFVVANAKFMLDEEEHFQEQM 120

Query: 153 EERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRV 212
            ERLR FGE+  EQDFWLVIEPKFL+KFPN+TKRLKRPAVALVSTNG WIT+MKLRLDRV
Sbjct: 121 FERLRYFGEQNKEQDFWLVIEPKFLEKFPNITKRLKRPAVALVSTNGTWITFMKLRLDRV 180

Query: 213 LAESYEADSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQ 256
           LAESYEADS+EEALASNPTK+EFE+PEKWVAPY KY  GWWE+FLPP SQ
Sbjct: 181 LAESYEADSIEEALASNPTKLEFEEPEKWVAPYTKYKSGWWESFLPPGSQ 219

[Close]

BLAST of Spo20640.1 vs. NCBI nr
Match: gi|1009116442|ref|XP_015874773.1| (PREDICTED: uncharacterized protein LOC107411662 [Ziziphus jujuba])

HSP 1 Score: 254.2 bits (648), Expect = 2.400e-64
Identity = 148/233 (63.52%), Postives = 172/233 (73.82%), Query Frame = 1


		  
Query: 30  SAKMVVLASSCITMSSTTTLLLHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLS--- 89
           SA    L   C+T S+      H+    K + L  S+ R +     T   F S  L+   
Sbjct: 2   SAAASSLGPGCLTASAKAKTHFHNSHNAKAVSLPVSANRNS---NHTFFPFNSKVLAFPP 61

Query: 90  SLSIGG-SSSSLRTPVSAVAMD---TSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFK 149
            LSI   SSSS++T V+AV  D   +S PS +S Q Q  K++YFVVANAKFMLDEEEHFK
Sbjct: 62  PLSISTKSSSSVKTAVAAVDSDQISSSDPSDNSKQ-QEAKRFYFVVANAKFMLDEEEHFK 121

Query: 150 ELMEERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRL 209
           EL+ ERLR++GER  EQDFWLVIEPKFLDKFPN+TKRLKRPAVALVSTNGPWIT+MKLRL
Sbjct: 122 ELLFERLRLYGERNKEQDFWLVIEPKFLDKFPNITKRLKRPAVALVSTNGPWITFMKLRL 181

Query: 210 DRVLAESYEADSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQ 256
           DRVL+ESY A+S+EEALASNPT IEFEKPEKWVAPY KY+YGWWEAFLPP S+
Sbjct: 182 DRVLSESYAAESIEEALASNPTNIEFEKPEKWVAPYPKYEYGWWEAFLPPGSK 230

[Close]

BLAST of Spo20640.1 vs. NCBI nr
Match: gi|703093475|ref|XP_010094941.1| (hypothetical protein L484_022691 [Morus notabilis])

HSP 1 Score: 252.3 bits (643), Expect = 9.100e-64
Identity = 128/184 (69.57%), Postives = 154/184 (83.70%), Query Frame = 1


		  
Query: 72  TATATAAAFRSLSLSSLSIGGSSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANA 131
           +A  T  +F S + +SL+   + SS +T V+AV  D    S +++ +Q  KKYYFVVANA
Sbjct: 35  SANYTHNSFFSFNSASLTPIAAKSSFKTAVAAVDSDGVTSSNAAENEQP-KKYYFVVANA 94

Query: 132 KFMLDEEEHFKELMEERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTN 191
           KFMLDEEEHFKEL+ ERLR++GER  EQDFWLVIEPKFLDKFPN+TKRLKRPAVALVSTN
Sbjct: 95  KFMLDEEEHFKELLSERLRLYGERNKEQDFWLVIEPKFLDKFPNITKRLKRPAVALVSTN 154

Query: 192 GPWITYMKLRLDRVLAESYEADSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLP 251
           GPWIT+MKLRLDRVL+ESYEA+SLE+AL+SNPT ++FEKPEKWVAPY KY++GWWE FLP
Sbjct: 155 GPWITFMKLRLDRVLSESYEAESLEKALSSNPTDLQFEKPEKWVAPYPKYEFGWWEPFLP 214

Query: 252 PASQ 256
           P S+
Sbjct: 215 PGSK 217

[Close]

BLAST of Spo20640.1 vs. NCBI nr
Match: gi|566201534|ref|XP_002319989.2| (hypothetical protein POPTR_0013s15690g [Populus trichocarpa])

HSP 1 Score: 250.0 bits (637), Expect = 4.500e-63
Identity = 123/162 (75.93%), Postives = 137/162 (84.57%), Query Frame = 1


		  
Query: 94  SSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMFG 153
           SSS +T V+AV  +    SP+    Q   KYYFVVANAKFMLDEEEHFKEL+ ERLR +G
Sbjct: 56  SSSFKTAVAAVDSNDLTSSPTPPDKQEANKYYFVVANAKFMLDEEEHFKELLFERLRNYG 115

Query: 154 ERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEAD 213
           ER  EQDFWLVIEPKFLDKFPN+TKRLKRPAVALVSTNG W+T+MKLRLDRVL++SYEAD
Sbjct: 116 ERNKEQDFWLVIEPKFLDKFPNITKRLKRPAVALVSTNGTWMTFMKLRLDRVLSDSYEAD 175

Query: 214 SLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQ 256
           +LEEALASNPT IEFEKPE WVAPY KY+YGWWEAFLP  S+
Sbjct: 176 TLEEALASNPTTIEFEKPENWVAPYSKYEYGWWEAFLPAESR 217

[Close]

BLAST of Spo20640.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRA4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_037420 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.200e-117
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1


		  
Query: 33  MVVLASSCITMSSTTTLLLHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSLSIGG 92
           MVVLASSCITMSSTTTLLLHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSLSIGG
Sbjct: 1   MVVLASSCITMSSTTTLLLHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSLSIGG 60

Query: 93  SSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMF 152
           SSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMF
Sbjct: 61  SSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMF 120

Query: 153 GERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEA 212
           GERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEA
Sbjct: 121 GERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEA 180

Query: 213 DSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQA 257
           DSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQA
Sbjct: 181 DSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQA 224

[Close]

BLAST of Spo20640.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9C6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g138620 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 5.300e-79
Identity = 171/230 (74.35%), Postives = 186/230 (80.87%), Query Frame = 1


		  
Query: 33  MVVLASSCITMSSTTTLL----LHSQQPYKPLLLLPSSCRTTATATATAAAFRSLSLSSL 92
           MVVLASS ++MSSTT ++    L SQQP KP  +LP S  TT           SLSLSSL
Sbjct: 1   MVVLASS-VSMSSTTAMMGSTFLCSQQPQKPFFILPKSRNTT----------HSLSLSSL 60

Query: 93  SIGG-SSSSLRTPVSAVAM--DTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELM 152
           SIGG   SSLRTP  AVA   DT+Q SPSS QDQTTKKYYFVVANAKFMLDEEEHF+E M
Sbjct: 61  SIGGIPPSSLRTPAVAVAATADTTQSSPSSTQDQTTKKYYFVVANAKFMLDEEEHFQEQM 120

Query: 153 EERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRV 212
            ERLR FGE+  EQDFWLVIEPKFL+KFPN+TKRLKRPAVALVSTNG WIT+MKLRLDRV
Sbjct: 121 FERLRYFGEQNKEQDFWLVIEPKFLEKFPNITKRLKRPAVALVSTNGTWITFMKLRLDRV 180

Query: 213 LAESYEADSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQ 256
           LAESYEADS+EEALASNPTK+EFE+PEKWVAPY KY  GWWE+FLPP SQ
Sbjct: 181 LAESYEADSIEEALASNPTKLEFEEPEKWVAPYTKYKSGWWESFLPPGSQ 219

[Close]

BLAST of Spo20640.1 vs. UniProtKB/TrEMBL
Match: W9R874_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022691 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.300e-64
Identity = 128/184 (69.57%), Postives = 154/184 (83.70%), Query Frame = 1


		  
Query: 72  TATATAAAFRSLSLSSLSIGGSSSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANA 131
           +A  T  +F S + +SL+   + SS +T V+AV  D    S +++ +Q  KKYYFVVANA
Sbjct: 35  SANYTHNSFFSFNSASLTPIAAKSSFKTAVAAVDSDGVTSSNAAENEQP-KKYYFVVANA 94

Query: 132 KFMLDEEEHFKELMEERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTN 191
           KFMLDEEEHFKEL+ ERLR++GER  EQDFWLVIEPKFLDKFPN+TKRLKRPAVALVSTN
Sbjct: 95  KFMLDEEEHFKELLSERLRLYGERNKEQDFWLVIEPKFLDKFPNITKRLKRPAVALVSTN 154

Query: 192 GPWITYMKLRLDRVLAESYEADSLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLP 251
           GPWIT+MKLRLDRVL+ESYEA+SLE+AL+SNPT ++FEKPEKWVAPY KY++GWWE FLP
Sbjct: 155 GPWITFMKLRLDRVLSESYEAESLEKALSSNPTDLQFEKPEKWVAPYPKYEFGWWEPFLP 214

Query: 252 PASQ 256
           P S+
Sbjct: 215 PGSK 217

[Close]

BLAST of Spo20640.1 vs. UniProtKB/TrEMBL
Match: B9I789_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s15690g PE=4 SV=2)

HSP 1 Score: 250.0 bits (637), Expect = 3.100e-63
Identity = 123/162 (75.93%), Postives = 137/162 (84.57%), Query Frame = 1


		  
Query: 94  SSSLRTPVSAVAMDTSQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMFG 153
           SSS +T V+AV  +    SP+    Q   KYYFVVANAKFMLDEEEHFKEL+ ERLR +G
Sbjct: 56  SSSFKTAVAAVDSNDLTSSPTPPDKQEANKYYFVVANAKFMLDEEEHFKELLFERLRNYG 115

Query: 154 ERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEAD 213
           ER  EQDFWLVIEPKFLDKFPN+TKRLKRPAVALVSTNG W+T+MKLRLDRVL++SYEAD
Sbjct: 116 ERNKEQDFWLVIEPKFLDKFPNITKRLKRPAVALVSTNGTWMTFMKLRLDRVLSDSYEAD 175

Query: 214 SLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPASQ 256
           +LEEALASNPT IEFEKPE WVAPY KY+YGWWEAFLP  S+
Sbjct: 176 TLEEALASNPTTIEFEKPENWVAPYSKYEYGWWEAFLPAESR 217

[Close]

BLAST of Spo20640.1 vs. UniProtKB/TrEMBL
Match: A5AMD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031633 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.000e-63
Identity = 122/161 (75.78%), Postives = 139/161 (86.34%), Query Frame = 1


		  
Query: 95  SSLRTPVSAVAMDT-SQPSPSSDQDQTTKKYYFVVANAKFMLDEEEHFKELMEERLRMFG 154
           +S +T V+++  D  S   P++ Q+Q + KYYFVVANAKFMLDEEEHFKEL+ ERLR +G
Sbjct: 61  ASFKTAVASIESDQLSSSDPANMQEQGSGKYYFVVANAKFMLDEEEHFKELLFERLRYYG 120

Query: 155 ERKMEQDFWLVIEPKFLDKFPNVTKRLKRPAVALVSTNGPWITYMKLRLDRVLAESYEAD 214
           ER  EQDFWLVIEPKFLDKFPN+TKRL+RPAVALVSTNGPWIT+MKLRLDRVL+ESYEA 
Sbjct: 121 ERSKEQDFWLVIEPKFLDKFPNITKRLRRPAVALVSTNGPWITFMKLRLDRVLSESYEAV 180

Query: 215 SLEEALASNPTKIEFEKPEKWVAPYQKYDYGWWEAFLPPAS 255
           SLEEALASNPT IEFEKPE WVAPY KY++GWWE FLPP S
Sbjct: 181 SLEEALASNPTDIEFEKPENWVAPYPKYEFGWWEPFLPPGS 221

[Close]

BLAST of Spo20640.1 vs. ExPASy Swiss-Prot
Match: YC54L_SYNY3 (Ycf54-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1780 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-13
Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 1


		  
Query: 124 YYFVVANAKFMLDEEEHFKELMEERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKRLKRP 183
           YY+ +A+ KF+L EEE F+E+++ER R +GE+  E DFW VI+P FL+       + K P
Sbjct: 31  YYYALASQKFLL-EEEPFEEVLKERRRDYGEKNKEIDFWQVIQPAFLNAPELAEAKAKAP 90

Query: 184 A--VALVSTNGPWITYMKLRLDRVLAESYEA--DSLEEALAS 222
              VA+VSTN  +I ++KLRL+ VL   +EA  D++ + LAS
Sbjct: 91  EKNVAIVSTNKSFIVWVKLRLEYVLTGEFEAPSDAIPDPLAS 131

[Close]

BLAST of Spo20640.1 vs. ExPASy Swiss-Prot
Match: YCF54_PORPU (Uncharacterized protein ycf54 OS=Porphyra purpurea GN=ycf54 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.400e-8
Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 1


		  
Query: 124 YYFVVANAKFMLDEEEHFKELMEERLRMFGERKMEQDFWLVIEPKFLDKFPNVTK---RL 183
           YYF +A+  F+L EE   +E+  ER+  +     E DFWL+  PKFL+K P + K    +
Sbjct: 4   YYFALASQNFLLSEEP-LEEVFRERINYYQSNNKEIDFWLIPNPKFLNK-PAMIKFKNLV 63

Query: 184 KRPAVALVSTNGPWITYMKLRLDRVLAESYEADSLE 217
              A+A++STN  +I ++KLR+  V    +E DSL+
Sbjct: 64  PNEAIAIISTNSIFINWLKLRIGYVCIGQFE-DSLK 96

[Close]

BLAST of Spo20640.1 vs. ExPASy Swiss-Prot
Match: YCF54_PYRYE (Uncharacterized protein ycf54 OS=Pyropia yezoensis GN=ycf54 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.000e-6
Identity = 31/95 (32.63%), Postives = 56/95 (58.95%), Query Frame = 1


		  
Query: 124 YYFVVANAKFMLDEEEHFKELMEERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKR--LK 183
           YYF +A+  F+L +E   +E+  ER+  +       DFWL+  P FL+K   ++ +  + 
Sbjct: 4   YYFALASQNFLLVQEP-LEEVFRERVNYYQSNNKAIDFWLIPNPSFLEKPEMISFKNLVP 63

Query: 184 RPAVALVSTNGPWITYMKLRLDRVLAESYEADSLE 217
           + AVA++STN  +I ++KLR+  +    +E D+L+
Sbjct: 64  KDAVAIISTNPIFINWLKLRIGYICIGQFE-DNLQ 96

[Close]

BLAST of Spo20640.1 vs. TAIR (Arabidopsis)
Match: AT5G58250.1 (unknown protein)

HSP 1 Score: 210.3 bits (534), Expect = 1.400e-54
Identity = 112/193 (58.03%), Postives = 141/193 (73.06%), Query Frame = 1


		  
Query: 65  SSCRTTATATATA--AAFRSLSLSSLSIGGSSSSLRTPVSAVAMDTSQPSPSSDQDQTTK 124
           ++CRT     +++     + L LSS S+   SS   +     A    Q S  +  + T  
Sbjct: 17  AACRTKPFLISSSFPKQTKKLHLSSPSLSLPSSHFSSSFKTAATSIEQQSSVNKGEST-- 76

Query: 125 KYYFVVANAKFMLDEEEHFKELMEERLRMFGERKMEQDFWLVIEPKFLDKFPNVTKRLKR 184
           KY+F+VANAKFMLDEEEHF+E + ERLR FGER++ QDFWLVIEPKFLD FP +T+RL+R
Sbjct: 77  KYHFLVANAKFMLDEEEHFQEQLFERLRYFGERELVQDFWLVIEPKFLDNFPKITQRLRR 136

Query: 185 PAVALVSTNGPWITYMKLRLDRVLAESYEADSLEEALASNPTKIEFEKPEKWVAPYQKYD 244
           PAVALVSTNG WIT+MKLRLDRVL +S+EA SL+EALASNPT +EF+KP+ WVAPY KY+
Sbjct: 137 PAVALVSTNGTWITFMKLRLDRVLYDSFEATSLDEALASNPTTLEFDKPKNWVAPYPKYE 196

Query: 245 YGWWEAFLPPASQ 256
            GWW+ FLP  +Q
Sbjct: 197 PGWWDTFLPKVTQ 207

The following BLAST results are available for this feature:

BLAST of Spo20640.1 vs. NCBI nr
BLAST of Spo20640.1 vs. UniProtKB/TrEMBL
BLAST of Spo20640.1 vs. ExPASy Swiss-Prot
BLAST of Spo20640.1 vs. TAIR (Arabidopsis)

BLAST of Spo20640.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230999\|gb\|KNA22071.1\|	3.2e-117	100.	hypothetical protein SOVF_0374...	[more]
gi\|731339723\|ref\|XP_010681010.1\|	7.7e-79	74.3	PREDICTED: uncharacterized pro...	[more]
gi\|1009116442\|ref\|XP_015874773.1\|	2.4e-64	63.5	PREDICTED: uncharacterized pro...	[more]
gi\|703093475\|ref\|XP_010094941.1\|	9.1e-64	69.5	hypothetical protein L484_0226...	[more]
gi\|566201534\|ref\|XP_002319989.2\|	4.5e-63	75.9	hypothetical protein POPTR_001...	[more]

BLAST of Spo20640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RRA4_SPIOL	2.2e-117	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C9C6_BETVU	5.3e-79	74.3	Uncharacterized protein OS=Bet...	[more]
W9R874_9ROSA	6.3e-64	69.5	Uncharacterized protein OS=Mor...	[more]
B9I789_POPTR	3.1e-63	75.9	Uncharacterized protein OS=Pop...	[more]
A5AMD2_VITVI	7.0e-63	75.7	Putative uncharacterized prote...	[more]

BLAST of Spo20640.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
YC54L_SYNY3	1.5e-13	45.1	Ycf54-like protein OS=Synechoc...	[more]
YCF54_PORPU	2.4e-8	38.5	Uncharacterized protein ycf54 ...	[more]
YCF54_PYRYE	3.0e-6	32.6	Uncharacterized protein ycf54 ...	[more]

BLAST of Spo20640.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G58250.1	1.4e-54	58.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019616	Uncharacterised protein family Ycf54	PFAM	PF10674	Ycf54	coord: 123..212 score: 1.6
None	No IPR available	PANTHER	PTHR35319	FAMILY NOT NAMED	coord: 42..255 score: 1.7E
None	No IPR available	PANTHER	PTHR35319:SF2	SUBFAMILY NOT NAMED	coord: 42..255 score: 1.7E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034641	cellular nitrogen compound metabolic process
biological_process	GO:0009306	protein secretion
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006725	cellular aromatic compound metabolic process
biological_process	GO:1901360	organic cyclic compound metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0006605	protein targeting
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0046483	heterocycle metabolic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005840	ribosome
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000166	nucleotide binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo26006	0.73	Barchart \| Table
Spo11369	0.71	Barchart \| Table
Spo19288	0.69	Barchart \| Table
Spo08824	0.69	Barchart \| Table
Spo10493	0.69	Barchart \| Table
Spo06060	0.68	Barchart \| Table
Spo03064	0.67	Barchart \| Table
Spo14906	0.67	Barchart \| Table
Spo26644	0.66	Barchart \| Table