Spo20562 (gene)

Overview
NameSpo20562
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionActin cytoskeleton-regulatory complex protein end3, putative isoform 9
LocationSpoScf_02426 : 40682 .. 41284 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGAAGACATGGTAGGAAATATGTGAAAGATGAAGAGTTTGAAGAAGAAGAAGTGTGGGGAGTTATGGAAGAAAATTCAAGCCCAAAACTCAGAAAATTACCCTTGAAATCTTCTTCTGCAACAAAACATTTTACTGCTGTTACTGGTGGTAATAATTCTGCTGCAAGAATGATACCAAGATCATCAACATCATCATCATCATTATTATCATCACCATCATCATGTGGAAAGCAGTCATCAGCACCAATGGATATTCCTGATTGGTCAAAAATCTATGGTAAGAAGAATAATGGTGCATCATCATGGGTTGATTATAATAATGCTGTTGTTACTACTCATGATGTGTATTATGGTCATGGGTGTCATGGTCATGTGAATCATGGTGATGGGAGTGATGAGGATGAGGATGGGGATAAGGATGATGATGATGATGATGATGATAACATGGTTCCACCACATGAGTACTTAGCAAAGAGGTTAGCAAGAAGTAAGATCTCATCTTTCTCTGTTTATGAAGGGATTGGAAGGACTCTCAAAGGGAGAGACCTTTGTAAAGTAAGAAATTCCATTTTGACTAAAACTGGTTTTCTAGAGTGA

mRNA sequence

ATGGCAGGAAGACATGGTAGGAAATATGTGAAAGATGAAGAGTTTGAAGAAGAAGAAGTGTGGGGAGTTATGGAAGAAAATTCAAGCCCAAAACTCAGAAAATTACCCTTGAAATCTTCTTCTGCAACAAAACATTTTACTGCTGTTACTGGTGGTAATAATTCTGCTGCAAGAATGATACCAAGATCATCAACATCATCATCATCATTATTATCATCACCATCATCATGTGGAAAGCAGTCATCAGCACCAATGGATATTCCTGATTGGTCAAAAATCTATGGTAAGAAGAATAATGGTGCATCATCATGGGTTGATTATAATAATGCTGTTGTTACTACTCATGATGTGTATTATGGTCATGGGTGTCATGGTCATGTGAATCATGGTGATGGGAGTGATGAGGATGAGGATGGGGATAAGGATGATGATGATGATGATGATGATAACATGGTTCCACCACATGAGTACTTAGCAAAGAGGTTAGCAAGAAGTAAGATCTCATCTTTCTCTGTTTATGAAGGGATTGGAAGGACTCTCAAAGGGAGAGACCTTTGTAAAGTAAGAAATTCCATTTTGACTAAAACTGGTTTTCTAGAGTGA

Coding sequence (CDS)

ATGGCAGGAAGACATGGTAGGAAATATGTGAAAGATGAAGAGTTTGAAGAAGAAGAAGTGTGGGGAGTTATGGAAGAAAATTCAAGCCCAAAACTCAGAAAATTACCCTTGAAATCTTCTTCTGCAACAAAACATTTTACTGCTGTTACTGGTGGTAATAATTCTGCTGCAAGAATGATACCAAGATCATCAACATCATCATCATCATTATTATCATCACCATCATCATGTGGAAAGCAGTCATCAGCACCAATGGATATTCCTGATTGGTCAAAAATCTATGGTAAGAAGAATAATGGTGCATCATCATGGGTTGATTATAATAATGCTGTTGTTACTACTCATGATGTGTATTATGGTCATGGGTGTCATGGTCATGTGAATCATGGTGATGGGAGTGATGAGGATGAGGATGGGGATAAGGATGATGATGATGATGATGATGATAACATGGTTCCACCACATGAGTACTTAGCAAAGAGGTTAGCAAGAAGTAAGATCTCATCTTTCTCTGTTTATGAAGGGATTGGAAGGACTCTCAAAGGGAGAGACCTTTGTAAAGTAAGAAATTCCATTTTGACTAAAACTGGTTTTCTAGAGTGA

Protein sequence

MAGRHGRKYVKDEEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMIPRSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYGHGCHGHVNHGDGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLKGRDLCKVRNSILTKTGFLE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20562.1Spo20562.1mRNA


Homology
BLAST of Spo20562.1 vs. NCBI nr
Match: gi|902186669|gb|KNA10757.1| (hypothetical protein SOVF_141420 [Spinacia oleracea])

HSP 1 Score: 386.7 bits (992), Expect = 2.400e-104
Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 1

		  

Query: 1   MAGRHGRKYVKDEEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMI 60
           MAGRHGRKYVKDEEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMI
Sbjct: 1   MAGRHGRKYVKDEEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMI 60

Query: 61  PRSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYG 120
           PRSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYG
Sbjct: 61  PRSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYG 120

Query: 121 HGCHGHVNHGDGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTL 180
           HGCHGHVNHGDGSDEDEDGDK  DDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTL
Sbjct: 121 HGCHGHVNHGDGSDEDEDGDK--DDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTL 180

Query: 181 KGRDLCKVRNSILTKTGFLE 201
           KGRDLCKVRNSILTKTGFLE
Sbjct: 181 KGRDLCKVRNSILTKTGFLE 198

BLAST of Spo20562.1 vs. NCBI nr
Match: gi|731351060|ref|XP_010686835.1| (PREDICTED: probable serine/threonine-protein kinase DDB_G0272282 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 228.4 bits (581), Expect = 1.100e-56
Identity = 145/215 (67.44%), Postives = 168/215 (78.14%), Query Frame = 1

		  

Query: 1   MAGRHGRKYVKDEEFEEEEVWGVMEE--NSSPKLRKLPLK-----SSSATKHFTAVTGGN 60
           MAGR+GRKY+KDE+FEE EVW VMEE  NSSPKL+K P K     SSSATKHFT +    
Sbjct: 1   MAGRYGRKYLKDEDFEEGEVWNVMEERENSSPKLKK-PFKNSSFLSSSATKHFTTMA--- 60

Query: 61  NSAARMIPRSSTSSSS-LLSSPSSCGKQSSAPMDIPDWSKIYGK----KNNG--ASSWVD 120
           ++A RMIPRSS+SSSS +++S SS  KQSSAP++IPDWSKIYGK    K NG  +SSWVD
Sbjct: 61  SAAPRMIPRSSSSSSSSVVASSSSSEKQSSAPVEIPDWSKIYGKTSKKKKNGTISSSWVD 120

Query: 121 YNNAVVTTHDVYYGHGCHGHVNHG-DGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARS 180
           YN      HD YYG+G + H +H  +G  +  DGD DD DDDDD+MVPPHEYLAK+LARS
Sbjct: 121 YN---AVNHDGYYGNGGNDHHHHHLNGYYDVGDGD-DDGDDDDDDMVPPHEYLAKKLARS 180

Query: 181 KISSFSVYEGIGRTLKGRDLCKVRNSILTKTGFLE 201
           +ISSFSVYEGIGRTLKGRDL KVRN+ILTKTGFLE
Sbjct: 181 QISSFSVYEGIGRTLKGRDLSKVRNAILTKTGFLE 207

BLAST of Spo20562.1 vs. NCBI nr
Match: gi|870852225|gb|KMT04169.1| (hypothetical protein BVRB_8g186170 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 152.9 bits (385), Expect = 5.900e-34
Identity = 90/128 (70.31%), Postives = 102/128 (79.69%), Query Frame = 1

		  

Query: 80  QSSAPMDIPDWSKIYGK----KNNG--ASSWVDYNNAVVTTHDVYYGHGCHGHVNHG-DG 139
           QSSAP++IPDWSKIYGK    K NG  +SSWVDYN      HD YYG+G + H +H  +G
Sbjct: 46  QSSAPVEIPDWSKIYGKTSKKKKNGTISSSWVDYN---AVNHDGYYGNGGNDHHHHHLNG 105

Query: 140 SDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLKGRDLCKVRNSI 199
             +  DGD DD DDDDD+MVPPHEYLAK+LARS+ISSFSVYEGIGRTLKGRDL KVRN+I
Sbjct: 106 YYDVGDGD-DDGDDDDDDMVPPHEYLAKKLARSQISSFSVYEGIGRTLKGRDLSKVRNAI 165

Query: 200 LTKTGFLE 201
           LTKTGFLE
Sbjct: 166 LTKTGFLE 169

BLAST of Spo20562.1 vs. NCBI nr
Match: gi|1009108364|ref|XP_015884356.1| (PREDICTED: zinc-regulated protein 8 [Ziziphus jujuba])

HSP 1 Score: 152.5 bits (384), Expect = 7.700e-34
Identity = 101/199 (50.75%), Postives = 134/199 (67.34%), Query Frame = 1

		  

Query: 6   GRKYVKDEEFEEEEVWGVMEEN--SSPKLRKLPLKSSSATKHFTAVTGGNNSAARMIPRS 65
           G   ++DE+FEEE+VWG ++E+  SSP  RK    SS+++  +       +SA RMIPR 
Sbjct: 9   GGTSMRDEDFEEEDVWGFVKESKDSSPITRKSKEYSSTSSSAWRI-----HSAPRMIPRV 68

Query: 66  STSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYGHGC 125
           +T ++       +  +QSSAP+DIPDWSKIYGK      SWV+ N       D ++G+  
Sbjct: 69  NTQTTI---EAKTHVQQSSAPVDIPDWSKIYGKNARNIGSWVNIN-------DDHHGNCA 128

Query: 126 --HGHVNHGDGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLK 185
             HG V + +G  +++  D DDDDDD D MVPPHE++A++LARS+ISSFSV EGIGRTLK
Sbjct: 129 DDHGGVVYENGHGDND--DDDDDDDDGDGMVPPHEWIARKLARSQISSFSVCEGIGRTLK 188

Query: 186 GRDLCKVRNSILTKTGFLE 201
           GRDL K+RN ILTKTGFLE
Sbjct: 189 GRDLSKMRNDILTKTGFLE 190

BLAST of Spo20562.1 vs. NCBI nr
Match: gi|743885691|ref|XP_011037628.1| (PREDICTED: uncharacterized protein LOC105134789 [Populus euphratica])

HSP 1 Score: 149.1 bits (375), Expect = 8.500e-33
Identity = 99/201 (49.25%), Postives = 130/201 (64.68%), Query Frame = 1

		  

Query: 3   GRHGRKYVKDEEFEEEEVWGVMEE-NSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMIP 62
           G +GR+ ++DE+FEEE+VW V++E   S    K P    S    F++     ++A RMIP
Sbjct: 16  GGYGRRSMRDEDFEEEDVWSVVKEMGDSSSSSKYPSSGPS----FSSAWHLPSTAPRMIP 75

Query: 63  RSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGA-SSWVDYNNAVVTTHDVYYG 122
            + T++++      +  +QSSAP++IPDWSKIYGK +    +SWVD +N +       YG
Sbjct: 76  ATKTTATN--HGGKAVHQQSSAPVNIPDWSKIYGKDSRVIMASWVDDHNGIA------YG 135

Query: 123 HGCHGHVNHG-DGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRT 182
            G   HVN   D  DED DGD          +VPPHE+LA++LARS+ISSFSV EGIGRT
Sbjct: 136 DGDDDHVNDDVDSCDEDGDGD----------IVPPHEWLARKLARSQISSFSVCEGIGRT 194

Query: 183 LKGRDLCKVRNSILTKTGFLE 201
           LKGRDL KVRN+ILTKTGFLE
Sbjct: 196 LKGRDLSKVRNAILTKTGFLE 194

BLAST of Spo20562.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTZ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_141420 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.700e-104
Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 1

		  

Query: 1   MAGRHGRKYVKDEEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMI 60
           MAGRHGRKYVKDEEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMI
Sbjct: 1   MAGRHGRKYVKDEEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMI 60

Query: 61  PRSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYG 120
           PRSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYG
Sbjct: 61  PRSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYG 120

Query: 121 HGCHGHVNHGDGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTL 180
           HGCHGHVNHGDGSDEDEDGDK  DDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTL
Sbjct: 121 HGCHGHVNHGDGSDEDEDGDK--DDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTL 180

Query: 181 KGRDLCKVRNSILTKTGFLE 201
           KGRDLCKVRNSILTKTGFLE
Sbjct: 181 KGRDLCKVRNSILTKTGFLE 198

BLAST of Spo20562.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVZ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g186170 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.100e-34
Identity = 90/128 (70.31%), Postives = 102/128 (79.69%), Query Frame = 1

		  

Query: 80  QSSAPMDIPDWSKIYGK----KNNG--ASSWVDYNNAVVTTHDVYYGHGCHGHVNHG-DG 139
           QSSAP++IPDWSKIYGK    K NG  +SSWVDYN      HD YYG+G + H +H  +G
Sbjct: 46  QSSAPVEIPDWSKIYGKTSKKKKNGTISSSWVDYN---AVNHDGYYGNGGNDHHHHHLNG 105

Query: 140 SDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLKGRDLCKVRNSI 199
             +  DGD DD DDDDD+MVPPHEYLAK+LARS+ISSFSVYEGIGRTLKGRDL KVRN+I
Sbjct: 106 YYDVGDGD-DDGDDDDDDMVPPHEYLAKKLARSQISSFSVYEGIGRTLKGRDLSKVRNAI 165

Query: 200 LTKTGFLE 201
           LTKTGFLE
Sbjct: 166 LTKTGFLE 169

BLAST of Spo20562.1 vs. UniProtKB/TrEMBL
Match: B9H111_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s01400g PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.700e-32
Identity = 94/199 (47.24%), Postives = 128/199 (64.32%), Query Frame = 1

		  

Query: 3   GRHGRKYVKDEEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMIPR 62
           G +GR+ ++DE+FEEE+VW V++E           K  S+   F++     ++A RMIP 
Sbjct: 16  GGYGRRSMRDEDFEEEDVWSVVKEMGDSSSNS---KYPSSGPSFSSAWHLPSTAPRMIPA 75

Query: 63  SSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGA-SSWVDYNNAVVTTHDVYYGH 122
           + T++++      +  +QSSAP++IPDWSKIYGK +    +SWVD +N +          
Sbjct: 76  TKTTATN--HGGKAAQQQSSAPVNIPDWSKIYGKDSRDIMASWVDDHNGIA--------- 135

Query: 123 GCHGHVNHGDGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLK 182
                  +GDG D   D   D D+D DD +VPPHE+LA++LARS+ISSFSV EGIGRTLK
Sbjct: 136 -------YGDGDDHVNDDVDDCDEDGDDGIVPPHEWLARKLARSQISSFSVCEGIGRTLK 193

Query: 183 GRDLCKVRNSILTKTGFLE 201
           GRDL KVRN+ILTKTGFLE
Sbjct: 196 GRDLSKVRNAILTKTGFLE 193

BLAST of Spo20562.1 vs. UniProtKB/TrEMBL
Match: B9RXK6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0904330 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.500e-32
Identity = 101/214 (47.20%), Postives = 141/214 (65.89%), Query Frame = 1

		  

Query: 3   GRHGRKYVKDEEFEEEEVWGVMEE--NSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMI 62
           G + R+ ++DE+FEEE++W V++E  +SSPK+RK   K +  +   ++     +SA RMI
Sbjct: 14  GGYSRRSMRDEDFEEEDIWSVVKEREDSSPKIRKS--KDNYCSSSPSSSAWRLHSAPRMI 73

Query: 63  PRSSTSSSSLLSSPSSCG------KQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTT 122
           PR++  S +    P++        +QSSAP++IPDWSKIYGK N    SW + ++     
Sbjct: 74  PRANIVSPTSAGVPATSTHEAKAVQQSSAPVNIPDWSKIYGK-NTRMGSWANNDDDDDDD 133

Query: 123 HD-----VYYGHGCHGHVNHGDG---SDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSK 182
            D     VY     HGHVN G+G   +  + + D + +DD++D MVPPHE++AK+LARS+
Sbjct: 134 DDDDDGIVYDDGEDHGHVN-GNGYYYNYNNNNVDVNGNDDEEDEMVPPHEWIAKKLARSQ 193

Query: 183 ISSFSVYEGIGRTLKGRDLCKVRNSILTKTGFLE 201
           ISSFSV EGIGRTLKGRDL KVRN+IL KTGFLE
Sbjct: 194 ISSFSVCEGIGRTLKGRDLSKVRNAILAKTGFLE 223

BLAST of Spo20562.1 vs. UniProtKB/TrEMBL
Match: I1KND2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G260700 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.600e-30
Identity = 93/196 (47.45%), Postives = 127/196 (64.80%), Query Frame = 1

		  

Query: 10  VKDEEFEEEEVWGVMEENS----SPKLRKLPLKSSSATKHFTAVTGGNNSAARMIPRS-S 69
           +++E+F+E +VWGV  E      SPKLR     S S++           ++ R IPR+ S
Sbjct: 19  MRNEDFDEGDVWGVAMERERNFLSPKLRVSKESSGSSSAWLLP------TSPRKIPRTNS 78

Query: 70  TSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYGHGCH 129
           T+ +SL S  S+  ++SSAPMDIPDWSKIYGK+              V+   +  G+G H
Sbjct: 79  TTPNSLESDSSNVVQRSSAPMDIPDWSKIYGKRGVEEG---------VSNKKLDCGYGDH 138

Query: 130 GHVNHGDGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLKGRD 189
               +GD  D+D+DG+      D+D+M+PPHE++A++LARS+ISSFSV EGIGRTLKGRD
Sbjct: 139 ----YGDDDDDDDDGE------DEDDMIPPHEWIARKLARSQISSFSVCEGIGRTLKGRD 189

Query: 190 LCKVRNSILTKTGFLE 201
           L KVRN+ILTKTGF+E
Sbjct: 199 LSKVRNAILTKTGFIE 189

BLAST of Spo20562.1 vs. TAIR (Arabidopsis)
Match: AT4G04630.1 (Protein of unknown function, DUF584)

HSP 1 Score: 120.9 bits (302), Expect = 8.700e-28
Identity = 85/192 (44.27%), Postives = 115/192 (59.90%), Query Frame = 1

		  

Query: 12  DEEFEEEEVWGVMEEN--SSPKLRKLPLKSSSATKHFTAVTGGNNSAARMIPRSSTSSSS 71
           DEEF+EE+VW V+ E   SSP++ K+P        HF++ +  ++S   +  R S   S 
Sbjct: 24  DEEFQEEDVWSVLREGETSSPEM-KIP------KSHFSSSSSSSSSPWNI--RRSKEVSG 83

Query: 72  LLSSPSSCGKQSSAPMDIPDWSKIYG-KKNNGASSWVDYNNAVVTTHDVYYGHGCHGHVN 131
           +        KQSSAPM++PDWSK+YG  K+N  SS                    H H +
Sbjct: 84  V--------KQSSAPMNVPDWSKVYGDSKSNRRSS--------------------HLHSH 143

Query: 132 HGDGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLKGRDLCKV 191
             D          DDD+DDD  MVPPHE++A++LAR++ISSFS+ EG+GRTLKGRDL KV
Sbjct: 144 AAD----------DDDEDDDGCMVPPHEWVARKLARTQISSFSMCEGVGRTLKGRDLSKV 168

Query: 192 RNSILTKTGFLE 201
           RN++L+KTGFLE
Sbjct: 204 RNAVLSKTGFLE 168

BLAST of Spo20562.1 vs. TAIR (Arabidopsis)
Match: AT4G21970.1 (Protein of unknown function, DUF584)

HSP 1 Score: 115.9 bits (289), Expect = 2.800e-26
Identity = 79/188 (42.02%), Postives = 105/188 (55.85%), Query Frame = 1

		  

Query: 13  EEFEEEEVWGVMEENSSPKLRKLPLKSSSATKHFTAVTGGNNSAARMIPRSSTSSSSLLS 72
           EEF+EEEVW V+ E+ +   +   +K S +   F+A    ++S+AR IP+ +  S     
Sbjct: 5   EEFQEEEVWSVLRESET---QGPEMKMSKSNNLFSA---SSSSSARYIPKGNEVSGG--- 64

Query: 73  SPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYGHGCHGHVNHGDG 132
                 KQSSAPM+IPDWSK+YG      SS +                       H   
Sbjct: 65  -----AKQSSAPMNIPDWSKVYGYSKKNTSSHL-----------------------HSWA 124

Query: 133 SDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLKGRDLCKVRNSI 192
            D+D++G            VPPHE +AKRLAR++ISSFS+ EGIGRTLKGRDL K RN++
Sbjct: 125 IDDDDEGSM----------VPPHELVAKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAV 145

Query: 193 LTKTGFLE 201
           LT+TGFLE
Sbjct: 185 LTRTGFLE 145

BLAST of Spo20562.1 vs. TAIR (Arabidopsis)
Match: AT3G45210.1 (Protein of unknown function, DUF584)

HSP 1 Score: 73.6 bits (179), Expect = 1.600e-13
Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 1

		  

Query: 142 DDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLKGRDLCKVRNSILTKTGFLE 201
           ++DDD  +  +PPHEYLAK    ++++SFSV+EGIGRTLKGRD+ +VRN+IL KTGFL+
Sbjct: 94  ENDDDGGEGKLPPHEYLAK----TRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

BLAST of Spo20562.1 vs. TAIR (Arabidopsis)
Match: AT5G03230.1 (Protein of unknown function, DUF584)

HSP 1 Score: 71.2 bits (173), Expect = 7.900e-13
Identity = 58/150 (38.67%), Postives = 72/150 (48.00%), Query Frame = 1

		  

Query: 62  RSSTSSSSLLSSPSSCG--------KQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVT 121
           + S S S L   P+  G        K  S P++IPDWSKI   +                
Sbjct: 50  KRSISISRLRRKPTKTGDSGNREITKTGSLPVNIPDWSKILKSE---------------- 109

Query: 122 THDVYYGHGCHGHVNHGDGSDEDEDGDKDDDDDDDDN-----MVPPHEYLAKRLARSKIS 181
               Y GH              D+D D DD+DDDD N     M+PPHEYLA+R      S
Sbjct: 110 ----YRGHAI-----------PDDDSDDDDEDDDDSNDGGRRMIPPHEYLARRRG----S 164

Query: 182 SFSVYEGIGRTLKGRDLCKVRNSILTKTGF 199
           SF+V+EGIG T KGRDL ++RN+I  K GF
Sbjct: 170 SFTVHEGIGGTAKGRDLRRLRNAIWEKIGF 164

BLAST of Spo20562.1 vs. TAIR (Arabidopsis)
Match: AT5G60680.1 (Protein of unknown function, DUF584)

HSP 1 Score: 70.9 bits (172), Expect = 1.000e-12
Identity = 51/137 (37.23%), Postives = 72/137 (52.55%), Query Frame = 1

		  

Query: 62  RSSTSSSSLLSSPSSCGKQSSAPMDIPDWSKIYGKKNNGASSWVDYNNAVVTTHDVYYGH 121
           RS   SS+  S+ SS    SS P+++PDWSKI                            
Sbjct: 58  RSGKKSSNRPSAASSAAAASSLPVNVPDWSKIL--------------------------- 117

Query: 122 GCHGHVNHGDGSDEDEDGDKDDDDDDDDNMVPPHEYLAKRLARSKISSFSVYEGIGRTLK 181
              G          +++ D DDD++D  + +PPHE+LAK    ++++SFSV+EG+GRTLK
Sbjct: 118 --RGEYRDNRRRSIEDNDDDDDDNEDGGDWLPPHEFLAK----TRMASFSVHEGVGRTLK 161

Query: 182 GRDLCKVRNSILTKTGF 199
           GRDL +VRN+I  K GF
Sbjct: 178 GRDLSRVRNAIFEKFGF 161

The following BLAST results are available for this feature:
BLAST of Spo20562.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902186669|gb|KNA10757.1|2.4e-10499.0hypothetical protein SOVF_1414... [more]
gi|731351060|ref|XP_010686835.1|1.1e-5667.4PREDICTED: probable serine/thr... [more]
gi|870852225|gb|KMT04169.1|5.9e-3470.3hypothetical protein BVRB_8g18... [more]
gi|1009108364|ref|XP_015884356.1|7.7e-3450.7PREDICTED: zinc-regulated prot... [more]
gi|743885691|ref|XP_011037628.1|8.5e-3349.2PREDICTED: uncharacterized pro... [more]
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BLAST of Spo20562.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QTZ4_SPIOL1.7e-10499.0Uncharacterized protein OS=Spi... [more]
A0A0J8BVZ4_BETVU4.1e-3470.3Uncharacterized protein OS=Bet... [more]
B9H111_POPTR1.7e-3247.2Uncharacterized protein OS=Pop... [more]
B9RXK6_RICCO8.5e-3247.2Putative uncharacterized prote... [more]
I1KND2_SOYBN3.6e-3047.4Uncharacterized protein OS=Gly... [more]
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BLAST of Spo20562.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20562.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G04630.18.7e-2844.2Protein of unknown function, D... [more]
AT4G21970.12.8e-2642.0Protein of unknown function, D... [more]
AT3G45210.11.6e-1361.0Protein of unknown function, D... [more]
AT5G03230.17.9e-1338.6Protein of unknown function, D... [more]
AT5G60680.11.0e-1237.2Protein of unknown function, D... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007608Senescence regulator S40PFAMPF04520Senescence_regcoord: 136..200
score: 8.9E-27coord: 13..103
score: 6.
NoneNo IPR availablePANTHERPTHR33083FAMILY NOT NAMEDcoord: 129..200
score: 6.0E-57coord: 6..102
score: 6.0
NoneNo IPR availablePANTHERPTHR33083:SF4SUBFAMILY NOT NAMEDcoord: 129..200
score: 6.0E-57coord: 6..102
score: 6.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010200 response to chitin
biological_process GO:0009744 response to sucrose
biological_process GO:0009750 response to fructose
biological_process GO:0009266 response to temperature stimulus
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0014070 response to organic cyclic compound
biological_process GO:0009725 response to hormone
biological_process GO:0001101 response to acid chemical
biological_process GO:0006457 protein folding
biological_process GO:0033358 UDP-L-arabinose biosynthetic process
biological_process GO:0006012 galactose metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0045227 capsule polysaccharide biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0009723 response to ethylene
biological_process GO:0009737 response to abscisic acid
biological_process GO:0045492 xylan biosynthetic process
biological_process GO:0009835 fruit ripening
biological_process GO:0006952 defense response
biological_process GO:0006520 cellular amino acid metabolic process
biological_process GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0007015 actin filament organization
biological_process GO:0006657 CDP-choline pathway
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0007033 vacuole organization
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007030 Golgi organization
biological_process GO:0000902 cell morphogenesis
biological_process GO:0010413 glucuronoxylan metabolic process
biological_process GO:0015706 nitrate transport
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0006972 hyperosmotic response
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0010155 regulation of proton transport
biological_process GO:0010207 photosystem II assembly
biological_process GO:0035970 peptidyl-threonine dephosphorylation
biological_process GO:0071482 cellular response to light stimulus
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0009414 response to water deprivation
biological_process GO:0009409 response to cold
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0005992 trehalose biosynthetic process
biological_process GO:0006833 water transport
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006096 glycolytic process
biological_process GO:0010167 response to nitrate
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0010091 trichome branching
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0051013 microtubule severing
biological_process GO:0043622 cortical microtubule organization
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0016049 cell growth
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006468 protein phosphorylation
biological_process GO:0045087 innate immune response
biological_process GO:0010029 regulation of seed germination
biological_process GO:0009693 ethylene biosynthetic process
biological_process GO:0030001 metal ion transport
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0033554 cellular response to stress
biological_process GO:0098542 defense response to other organism
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006464 cellular protein modification process
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0016310 phosphorylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0031347 regulation of defense response
biological_process GO:0043067 regulation of programmed cell death
biological_process GO:0009651 response to salt stress
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0009966 regulation of signal transduction
biological_process GO:0048510 regulation of timing of transition from vegetative to reproductive phase
biological_process GO:0005982 starch metabolic process
biological_process GO:0006816 calcium ion transport
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0010224 response to UV-B
biological_process GO:0010046 response to mycotoxin
biological_process GO:2000030 regulation of response to red or far red light
biological_process GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0006486 protein glycosylation
biological_process GO:0009630 gravitropism
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005737 cytoplasm
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005874 microtubule
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0017177 glucosidase II complex
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005634 nucleus
cellular_component GO:0031966 mitochondrial membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0000785 chromatin
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0004575 sucrose alpha-glucosidase activity
molecular_function GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0030554 adenyl nucleotide binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0000989 transcription factor activity, transcription factor binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003978 UDP-glucose 4-epimerase activity
molecular_function GO:0050373 UDP-arabinose 4-epimerase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0051087 chaperone binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0003939 L-iditol 2-dehydrogenase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0004713 protein tyrosine kinase activity
molecular_function GO:0019899 enzyme binding
molecular_function GO:0008374 O-acyltransferase activity
molecular_function GO:0004620 phospholipase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0004142 diacylglycerol cholinephosphotransferase activity
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0004712 protein serine/threonine/tyrosine kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo253200.83Barchart | Table
Spo223970.82Barchart | Table
Spo240400.79Barchart | Table
Spo007480.78Barchart | Table
Spo238520.78Barchart | Table
Spo070770.77Barchart | Table
Spo041290.77Barchart | Table
Spo142950.77Barchart | Table
Spo177130.76Barchart | Table
Spo259170.76Barchart | Table
Spo271650.75Barchart | Table
Spo077860.75Barchart | Table
Spo213620.75Barchart | Table
Spo217850.75Barchart | Table
Spo015140.74Barchart | Table
Spo083250.74Barchart | Table
Spo020910.74Barchart | Table
Spo188000.74Barchart | Table
Spo161710.74Barchart | Table
Spo271620.74Barchart | Table
Spo270310.74Barchart | Table
Spo207290.73Barchart | Table
Spo268990.73Barchart | Table
Spo260860.73Barchart | Table
Spo007080.73Barchart | Table
Spo251290.73Barchart | Table
Spo016290.73Barchart | Table
Spo160490.72Barchart | Table
Spo185890.72Barchart | Table
Spo176310.72Barchart | Table
Spo139520.72Barchart | Table
Spo076460.72Barchart | Table
Spo247690.72Barchart | Table
Spo248080.72Barchart | Table
Spo146820.72Barchart | Table
Spo260130.72Barchart | Table
Spo248180.72Barchart | Table
Spo013520.72Barchart | Table
Spo036300.72Barchart | Table
Spo173380.72Barchart | Table
Spo142940.71Barchart | Table
Spo093990.71Barchart | Table
Spo091520.71Barchart | Table
Spo246070.71Barchart | Table
Spo198680.71Barchart | Table
Spo128490.71Barchart | Table
Spo049010.71Barchart | Table
Spo140970.71Barchart | Table
Spo217840.71Barchart | Table
Spo240600.71Barchart | Table
Spo041220.71Barchart | Table
Spo250780.71Barchart | Table
Spo131840.71Barchart | Table
Spo132020.71Barchart | Table
Spo216760.71Barchart | Table
Spo184750.71Barchart | Table
Spo011370.70Barchart | Table
Spo197880.70Barchart | Table
Spo201740.70Barchart | Table
Spo215250.70Barchart | Table
Spo261990.70Barchart | Table
Spo024050.70Barchart | Table
Spo024060.70Barchart | Table
Spo042010.70Barchart | Table
Spo043790.70Barchart | Table
Spo253500.70Barchart | Table
Spo050470.70Barchart | Table
Spo069190.70Barchart | Table
Spo007820.70Barchart | Table
Spo075150.70Barchart | Table
Spo084940.70Barchart | Table
Spo113390.70Barchart | Table
Spo123220.70Barchart | Table
Spo166520.70Barchart | Table
Spo220330.70Barchart | Table
Spo237510.69Barchart | Table
Spo080340.69Barchart | Table
Spo031070.69Barchart | Table
Spo016160.69Barchart | Table
Spo237160.69Barchart | Table
Spo057810.69Barchart | Table
Spo158660.69Barchart | Table
Spo096350.69Barchart | Table
Spo036620.69Barchart | Table
Spo119750.69Barchart | Table
Spo002830.68Barchart | Table
Spo024440.68Barchart | Table
Spo238420.68Barchart | Table
Spo122180.68Barchart | Table
Spo097610.68Barchart | Table
Spo096360.68Barchart | Table
Spo093330.68Barchart | Table
Spo059280.68Barchart | Table
Spo045540.68Barchart | Table
Spo161900.68Barchart | Table
Spo165870.68Barchart | Table
Spo189970.68Barchart | Table
Spo172410.68Barchart | Table
Spo273520.67Barchart | Table
Spo012910.67Barchart | Table
Spo030190.67Barchart | Table
Spo036100.67Barchart | Table
Spo041300.67Barchart | Table
Spo051950.67Barchart | Table
Spo071990.67Barchart | Table
Spo078030.67Barchart | Table
Spo087250.67Barchart | Table
Spo107300.67Barchart | Table
Spo109330.67Barchart | Table
Spo127120.67Barchart | Table
Spo179590.67Barchart | Table
Spo199650.67Barchart | Table
Spo227720.67Barchart | Table
Spo231720.67Barchart | Table
Spo236640.67Barchart | Table
Spo247960.67Barchart | Table
Spo205950.66Barchart | Table
Spo166480.66Barchart | Table
Spo049070.66Barchart | Table
Spo048310.66Barchart | Table
Spo027970.66Barchart | Table
Spo024810.66Barchart | Table
Spo018760.66Barchart | Table
Spo012610.66Barchart | Table
Spo216020.66Barchart | Table
Spo215090.66Barchart | Table
Spo212140.66Barchart | Table
Spo228180.66Barchart | Table
Spo234900.66Barchart | Table
Spo139450.66Barchart | Table
Spo134820.66Barchart | Table
Spo123720.66Barchart | Table
Spo119180.66Barchart | Table
Spo117250.66Barchart | Table
Spo108610.66Barchart | Table
Spo095750.66Barchart | Table
Spo000670.66Barchart | Table
Spo093340.66Barchart | Table
Spo083720.66Barchart | Table
Spo050930.66Barchart | Table
Spo011840.65Barchart | Table
Spo067840.65Barchart | Table
Spo007220.65Barchart | Table
Spo054050.65Barchart | Table
Spo001720.65Barchart | Table
Spo169360.65Barchart | Table
Spo108260.65Barchart | Table
Spo249400.65Barchart | Table
Spo238430.65Barchart | Table