Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTTTTATTAAAGAAAATAACAGAAAGAAATAAAATGAAACCGTGGGCAAAACTAGTTAATTGACTAAAGTTGAAGAAAAGTCTGGATTGATGAATTGATCAATCGGCAAGGTGGTAGTTGTAGTTATCAATGAAGACTTATAAGTTCCTTCAATTCGGCCCTTTGTCTCTCTCTGTATCTTCCCAGTTTTTCATCCAAAAGCGAAAGGAGTAGGTACGTCATCCCTGTCGCAAGCTTTCGCCATGGCCGCAGCGTAAGAAAATTACTCAAAATTTTCCATTTTCCCTCAATTATTCACGTATTTCGATGTTTTTCTTTGTAATTTTGAGTTATATTTTGCGAATTTACTCCGAGATTATGTATGATTCATGATGTTTTACGATGGTCTGTTTTTCAGAGACACTAAAGTTGGTCTCCCACCAACACTGGATTCAAAATCGGCGCAACCTCCTTTTCTCGACGGAACTACTAGGTGCTTCTCTTTCTTATTATTATTTTAATGTTGGATTTTTTGTTAATTATTGTTAATTCATAGTGTGCGGATTATTTAATTTCCAGCAGTTGTTTGGTAGTGTCAAGCATTATTTATTTGAGATATAATATCATAGCTTACGCTTTTAACCTAGCTATGAAGTTTTTGATTTATTAGTTTATCTCTAAGTATATAAAATTCCAAGGATCGTGAGGTTTGGATCGGGGTAAGTTGATTTTGGTCATATTTCGTACTAGATTTTAGCCCGTGCGATGCACGGATTCTATTAAATTGTTATGTTTAAATAAAAATACTATGTATATACCACTTTTATATATTAGATTAGATTAGTTTTTGATTTTGCATTGAATTTCGTTTTAGATTTTTTTAATTTTATTACGAGAGTGTTTGTTTTTGGATGAAATTGTATATGCGTAATATTAATAATTAATTAATAAAAAATAACTACGTGACACTTAATCATTTCTTTACGCGACACTCGACTTTTTTTAATTCAAAATCAATTTTGAAATATTATTTTTCATTGGCCGAAACCATTAGATTTTTCTACGTGGCGCTCTAATATTGGATTAATGTTTGATTTTAAATTGAATTTTATTTATTTTATTTTAGATTATTGTTTGATTTTGGATGAATTTTATTTTAGATTTATTTTTTAATTATTAGAGTGTTTGATTTTAGATGGAGTTGTATATATTTGTAATAATTAATTAATTAATTAATTAAAATATCTATGTGGCACCTAATTAATTATGTACGGGGCAATCGATCATTTTTAATTATTAGAGTGTTTGATTTTCGATGGAGTTGTATATATTAATAATTAATTAATTAAAATATCTACGTGGCACCTAATTAATTATCTACGTGGCACTTGATTTTTTTAATTCAAAAAGAAATTAGAAATCTTATTTTTCATTGGCCGAAATCATTAGTAATCCTAGGTGGCGCTCTAATCTTTCAGCAAATATGCCTCCTTTATATATGTATATTAGATTCGCTTGGGTACTTGGGAATTGATTTAGAATCGTAACAATAATAAATTAATGATGGTGAGATTCCTGTGAGTTACCTTCTTACGGTGAAAAACTCCTTTTATCTTAAGAAACTTTGCCTATTATTCGAATGATATGTGCGTAGTTTTCGAACTATGTGTGCATATTTTTTTAGATAATTTTGCAAAAAAGAAAATTGCGAGAATATAAATTTTAATTTCCTGAAACACATAAAAAAAAAATACGCACAAATATTTGAGACAAATAATATGCACATATAGTTCAAAAAGTATGCATATTTAATTATTTACATATTTTCATAGTAAAAATATTGCATTGAATAGCCTACGTGGCACCTATATGTACCAATTAAATTCTGACATGTAAGATTGCGACAACTAAATGTTGTTACAACTTGCGACCTTTATCACCACCCTTTTACTTATTGTTGAGATAGGGATACACCGATTATGTAATCCACCAACCCAAAGCTTAATAATAAGAAACATAAAAGAGTATACAGACCCTAACAATGATGCACTTTAACTTTGAATCGATGTGCAAATGGTGAAATACAAGACTCGTTTACCACTCAAACTCACAAGAGTAATAAATCTTGCCCAAACATGGTTCTTTTTAGCAAAATGAACTTTTTTCCTAACTGATTGTGTTAAACTATAAACACTCAAACAAGTTACCCTAGGGAAATTATACTTAGAATATGAAACAATCGTCTAGGTTGGTTAGCACCCCATTTGCGCGGGAACACTATAGCATGGGTTGCAAAGTCTTACACACTCGGGCATATATGTTTGAAGTCAACTTTTCACAATGGCTTGCCATCCGTGGCATGCTTTCATATACCCTTGTCCTTTGCCTCTGACAATATGTCACACCATTTCACTTGTGCGTTCATGTTGATCTTACTGAACACCGGACGTTTGTTGTCAAGCCTATGGCCTACCTATTGCCACGAGCATTCTCCCTAACCCCCTAAACACTTCAACAGGCTCCATATTTAAATACACACAAACGACAGTCTCCACTTATAAATTTTGACAACAGTAACGACTATTGATATAATTTAGAATCTACACTTTGTAGAAGAATGTTCAAAGATAAATTTGACAAATGCTCCATAGATATTTACATTATATTACAATATGCTTTTTAAGAAAATTGATGGTTGATGTTGTGAACAAAGAAAAGAATAAACGAGGTTCTAATGTTCAATGAAGAGTAAGTACTAGATCGAGGGAGAATTAAACTTTAGGATATTTGTCTTTGCTCCCTTTTTGAACTAACTAGATTCTCAAGTTGAAACTTGGCTTACTTATTATGCATGGAGTGCACGCATATAATAATCGGTGGCAATATATTATTGAGATTTGCGCACAACATTGTACAATGTAGACATCAAACTAAGACCCTGTTGTTTTTCTATTTGTTTTGATGAGAAGAAAATATATAATTTTATGTTTTGTACTTTAATTTATCAGGTTGTACACTGCCTACACCTGTCCTTATGCCCAGCGTGTCTGGATTGCTCTAAATTACAAGGTATGTTTTCCCGTATTCTTCCATTATTTTATACTTAATGTCAAATGTAATTCAGCTATAGCTTTGTTAACTAGCCTCCTCCTTGTGCATCTTGTTGATTTTCTTCAATGTTGAGCATTCTTGTGGATGAGTTTGAAGAATAATTCCTAATTATTACACGGATTTTTTTTTCTGACTTTACAGGGATTGCAGGATAAAATCCAATTGGTCCCCATTAATTTAGGTGATAAACCGGCGTGGTACAAGGATGTTTACCCGCCTTCTAAGGTAAGGTGTTTCACTGACCAAGCCACCAAAGTCTATTTGATGGATTGCAGTATACTACTTGATTTTTTGGCTATGCTGCATTGCTGCATAATAAATTAAATGTTTAGCACTTTGTTTGACAGAAGGAAATGCTTATTTATTGAAGGGCGTGGTAAACTGGTAATAGTCTAAAGTGATTAAAAATGTTTGACTAGCTGGTTAATTGCTAGCTCACTTTCACTTCGTGGGCTTTTGGTTTGTTTAACAGTGTTAACAAAGAGCCTTCAAGTGAGGATGTCAGGGGCTAGAACTGAAGTAATTTAACTTTGGTTCAGTCTTTCCCAGCTAAAGAATATATGATCAACTTGTTGTTTCTTAGTTAGAAACTCGACATGTTTGTCTTTTGGACTAGGGTGGTAACTGGCGTTATATGCACGTACTGATCTTTGCTATCAAAAGTTTTAGTTTGTCATTATTTATATAGGTTCCTGCTCTGGAGCACAACAATGAGGTCAAGGGGGAGAGCCTCGATTTGCTGAAATATCTAGATAGCCACTTTGAAGGACCAAAACTTTTCCCTGATGTAAGTCGGCCTCTTTGCACATTATAGGTTGTTTGAAATTTTATTCCTACTTTACTTTGTATTATTAATTTCATGAAAATATCTGCAGGATCCTGCTAAGAAAGAATTTGCAGAGGAGATGTTGGCCTATGCTGGCACATTTGGTGGAGCTGTTCTGTCTCATCTCAAAGGGGGTCCTGAGAGTGAAACGAGTATGGATTGAGAGCCTCTGTTTTTTAATCTTTAGAAGTTTCTTAGTATTACCTGATGCGATGTAATTAAATGCTTTGCTTTCTTCTCTTTGCAGTTGCTGGCTTTGACAAATTAGAAGTGGCTCTTTCTAAATTTGATGATGGGCCTTTCTTCCTTGGCCAATTTAGTGCGGTAAGTTACAGTAACAGTGCTCCTCAGTCCTCACTGGTTTAG CTTTTTTTTATTAAAGAAAATAACAGAAAGAAATAAAATGAAACCGTGGGCAAAACTAGTTAATTGACTAAAGTTGAAGAAAAGTCTGGATTGATGAATTGATCAATCGGCAAGGTGGTAGTTGTAGTTATCAATGAAGACTTATAAGTTCCTTCAATTCGGCCCTTTGTCTCTCTCTGTATCTTCCCAGTTTTTCATCCAAAAGCGAAAGGAGTAGGTACGTCATCCCTGTCGCAAGCTTTCGCCATGGCCGCAGCAGACACTAAAGTTGGTCTCCCACCAACACTGGATTCAAAATCGGCGCAACCTCCTTTTCTCGACGGAACTACTAGGTTGTACACTGCCTACACCTGTCCTTATGCCCAGCGTGTCTGGATTGCTCTAAATTACAAGGGATTGCAGGATAAAATCCAATTGGTCCCCATTAATTTAGGTGATAAACCGGCGTGGTACAAGGATGTTTACCCGCCTTCTAAGGTTCCTGCTCTGGAGCACAACAATGAGGTCAAGGGGGAGAGCCTCGATTTGCTGAAATATCTAGATAGCCACTTTGAAGGACCAAAACTTTTCCCTGATGATCCTGCTAAGAAAGAATTTGCAGAGGAGATGTTGGCCTATGCTGGCACATTTGGTGGAGCTGTTCTGTCTCATCTCAAAGGGGGTCCTGAGAGTGAAACGATTGCTGGCTTTGACAAATTAGAAGTGGCTCTTTCTAAATTTGATGATGGGCCTTTCTTCCTTGGCCAATTTAGTGCGGTAAGTTACAGTAACAGTGCTCCTCAGTCCTCACTGGTTTAG ATGGCCGCAGCAGACACTAAAGTTGGTCTCCCACCAACACTGGATTCAAAATCGGCGCAACCTCCTTTTCTCGACGGAACTACTAGGTTGTACACTGCCTACACCTGTCCTTATGCCCAGCGTGTCTGGATTGCTCTAAATTACAAGGGATTGCAGGATAAAATCCAATTGGTCCCCATTAATTTAGGTGATAAACCGGCGTGGTACAAGGATGTTTACCCGCCTTCTAAGGTTCCTGCTCTGGAGCACAACAATGAGGTCAAGGGGGAGAGCCTCGATTTGCTGAAATATCTAGATAGCCACTTTGAAGGACCAAAACTTTTCCCTGATGATCCTGCTAAGAAAGAATTTGCAGAGGAGATGTTGGCCTATGCTGGCACATTTGGTGGAGCTGTTCTGTCTCATCTCAAAGGGGGTCCTGAGAGTGAAACGATTGCTGGCTTTGACAAATTAGAAGTGGCTCTTTCTAAATTTGATGATGGGCCTTTCTTCCTTGGCCAATTTAGTGCGGTAAGTTACAGTAACAGTGCTCCTCAGTCCTCACTGGTTTAG MAAADTKVGLPPTLDSKSAQPPFLDGTTRLYTAYTCPYAQRVWIALNYKGLQDKIQLVPINLGDKPAWYKDVYPPSKVPALEHNNEVKGESLDLLKYLDSHFEGPKLFPDDPAKKEFAEEMLAYAGTFGGAVLSHLKGGPESETIAGFDKLEVALSKFDDGPFFLGQFSAVSYSNSAPQSSLV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20529.1 vs. NCBI nr
Match: gi|902205606|gb|KNA15210.1| (hypothetical protein SOVF_100390, partial [Spinacia oleracea]) HSP 1 Score: 356.3 bits (913), Expect = 3.200e-95 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Spo20529.1 vs. NCBI nr
Match: gi|731360550|ref|XP_010691882.1| (PREDICTED: protein IN2-1 homolog B-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 282.0 bits (720), Expect = 7.700e-73 Identity = 132/171 (77.19%), Postives = 146/171 (85.38%), Query Frame = 1
BLAST of Spo20529.1 vs. NCBI nr
Match: gi|359479025|ref|XP_003632205.1| (PREDICTED: glutathione S-transferase L3-like isoform X1 [Vitis vinifera]) HSP 1 Score: 250.0 bits (637), Expect = 3.200e-63 Identity = 118/172 (68.60%), Postives = 140/172 (81.40%), Query Frame = 1
BLAST of Spo20529.1 vs. NCBI nr
Match: gi|297746174|emb|CBI16230.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 248.1 bits (632), Expect = 1.200e-62 Identity = 116/163 (71.17%), Postives = 137/163 (84.05%), Query Frame = 1
BLAST of Spo20529.1 vs. NCBI nr
Match: gi|731392421|ref|XP_010651090.1| (PREDICTED: glutathione S-transferase L3-like isoform X2 [Vitis vinifera]) HSP 1 Score: 248.1 bits (632), Expect = 1.200e-62 Identity = 116/163 (71.17%), Postives = 137/163 (84.05%), Query Frame = 1
BLAST of Spo20529.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6S5_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_100390 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 2.200e-95 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Spo20529.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJN5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016480 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 5.300e-73 Identity = 132/171 (77.19%), Postives = 146/171 (85.38%), Query Frame = 1
BLAST of Spo20529.1 vs. UniProtKB/TrEMBL
Match: D7SKQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03690 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 8.500e-63 Identity = 116/163 (71.17%), Postives = 137/163 (84.05%), Query Frame = 1
BLAST of Spo20529.1 vs. UniProtKB/TrEMBL
Match: D7T492_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03470 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 9.500e-62 Identity = 117/172 (68.02%), Postives = 138/172 (80.23%), Query Frame = 1
BLAST of Spo20529.1 vs. UniProtKB/TrEMBL
Match: B9HM14_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04660g PE=1 SV=2) HSP 1 Score: 243.8 bits (621), Expect = 1.600e-61 Identity = 119/172 (69.19%), Postives = 135/172 (78.49%), Query Frame = 1
BLAST of Spo20529.1 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.400e-58 Identity = 110/172 (63.95%), Postives = 131/172 (76.16%), Query Frame = 1
BLAST of Spo20529.1 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.400e-58 Identity = 110/172 (63.95%), Postives = 131/172 (76.16%), Query Frame = 1
BLAST of Spo20529.1 vs. ExPASy Swiss-Prot
Match: GSTL3_ARATH (Glutathione S-transferase L3 OS=Arabidopsis thaliana GN=GSTL3 PE=2 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 8.000e-54 Identity = 100/162 (61.73%), Postives = 122/162 (75.31%), Query Frame = 1
BLAST of Spo20529.1 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.000e-53 Identity = 102/168 (60.71%), Postives = 122/168 (72.62%), Query Frame = 1
BLAST of Spo20529.1 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.700e-51 Identity = 98/170 (57.65%), Postives = 121/170 (71.18%), Query Frame = 1
BLAST of Spo20529.1 vs. TAIR (Arabidopsis)
Match: AT5G02790.1 (Glutathione S-transferase family protein) HSP 1 Score: 211.5 bits (537), Expect = 4.500e-55 Identity = 100/162 (61.73%), Postives = 122/162 (75.31%), Query Frame = 1
BLAST of Spo20529.1 vs. TAIR (Arabidopsis)
Match: AT5G02780.1 (glutathione transferase lambda 1) HSP 1 Score: 199.9 bits (507), Expect = 1.400e-51 Identity = 96/160 (60.00%), Postives = 119/160 (74.38%), Query Frame = 1
BLAST of Spo20529.1 vs. TAIR (Arabidopsis)
Match: AT3G55040.1 (glutathione transferase lambda 2) HSP 1 Score: 196.4 bits (498), Expect = 1.500e-50 Identity = 96/161 (59.63%), Postives = 119/161 (73.91%), Query Frame = 1
BLAST of Spo20529.1 vs. TAIR (Arabidopsis)
Match: AT1G19570.1 (dehydroascorbate reductase) HSP 1 Score: 66.6 bits (161), Expect = 1.800e-11 Identity = 52/143 (36.36%), Postives = 71/143 (49.65%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20529.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20529.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20529.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo20529.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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