Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTAAACAACGACAAAACTTAACACATCTCCATTTTTACTTCCATGACTACTTTAAAGGGCCTAACCAAAGTGCGTTCCGCATCGCCCAAGCCCCGAACACGGACAAAACTCCCAGTGGTTTTGGGGCGCTTGTTATGATTGATGATCCCTTGAAAGAAGGCCCCGAAAACGACTCGAAAACTATTGGATATGCGCAAGGAATGTATGGGTTCGCAGACCAAAAGCAACAAGGAATCTTGATGGTCATGAATTTAGTGTTTATTGAGGGTCAATATAATGGAAGTACAATAAGTGTGTTAGGGAGGAATGAAGTTATGAGTAAGGTTAGAGAAATGGGTGTTGTGGGTGGAAGTGGTGTATTTAGGTTTGCTACAGGGTATGCACAAGCCAAGACTATTACAATGTTGGATAAATTTGGTGCTAGTGTTGTTGAATATGATGTTTATGTTCAACATTAG ATGGGGATTAAACAACGACAAAACTTAACACATCTCCATTTTTACTTCCATGACTACTTTAAAGGGCCTAACCAAAGTGCGTTCCGCATCGCCCAAGCCCCGAACACGGACAAAACTCCCAGTGGTTTTGGGGCGCTTGTTATGATTGATGATCCCTTGAAAGAAGGCCCCGAAAACGACTCGAAAACTATTGGATATGCGCAAGGAATGTATGGGTTCGCAGACCAAAAGCAACAAGGAATCTTGATGGTCATGAATTTAGTGTTTATTGAGGGTCAATATAATGGAAGTACAATAAGTGTGTTAGGGAGGAATGAAGTTATGAGTAAGGTTAGAGAAATGGGTGTTGTGGGTGGAAGTGGTGTATTTAGGTTTGCTACAGGGTATGCACAAGCCAAGACTATTACAATGTTGGATAAATTTGGTGCTAGTGTTGTTGAATATGATGTTTATGTTCAACATTAG ATGGGGATTAAACAACGACAAAACTTAACACATCTCCATTTTTACTTCCATGACTACTTTAAAGGGCCTAACCAAAGTGCGTTCCGCATCGCCCAAGCCCCGAACACGGACAAAACTCCCAGTGGTTTTGGGGCGCTTGTTATGATTGATGATCCCTTGAAAGAAGGCCCCGAAAACGACTCGAAAACTATTGGATATGCGCAAGGAATGTATGGGTTCGCAGACCAAAAGCAACAAGGAATCTTGATGGTCATGAATTTAGTGTTTATTGAGGGTCAATATAATGGAAGTACAATAAGTGTGTTAGGGAGGAATGAAGTTATGAGTAAGGTTAGAGAAATGGGTGTTGTGGGTGGAAGTGGTGTATTTAGGTTTGCTACAGGGTATGCACAAGCCAAGACTATTACAATGTTGGATAAATTTGGTGCTAGTGTTGTTGAATATGATGTTTATGTTCAACATTAG MGIKQRQNLTHLHFYFHDYFKGPNQSAFRIAQAPNTDKTPSGFGALVMIDDPLKEGPENDSKTIGYAQGMYGFADQKQQGILMVMNLVFIEGQYNGSTISVLGRNEVMSKVREMGVVGGSGVFRFATGYAQAKTITMLDKFGASVVEYDVYVQH Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20523.1 vs. NCBI nr
Match: gi|902191898|gb|KNA11943.1| (hypothetical protein SOVF_130500 [Spinacia oleracea]) HSP 1 Score: 314.3 bits (804), Expect = 1.200e-82 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of Spo20523.1 vs. NCBI nr
Match: gi|731364202|ref|XP_010693845.1| (PREDICTED: dirigent protein 21-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 265.8 bits (678), Expect = 4.800e-68 Identity = 124/154 (80.52%), Postives = 141/154 (91.56%), Query Frame = 1
BLAST of Spo20523.1 vs. NCBI nr
Match: gi|870846209|gb|KMS98804.1| (hypothetical protein BVRB_3g068790 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 265.8 bits (678), Expect = 4.800e-68 Identity = 124/154 (80.52%), Postives = 141/154 (91.56%), Query Frame = 1
BLAST of Spo20523.1 vs. NCBI nr
Match: gi|731364204|ref|XP_010693846.1| (PREDICTED: dirigent protein 22-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 227.3 bits (578), Expect = 1.900e-56 Identity = 107/151 (70.86%), Postives = 127/151 (84.11%), Query Frame = 1
BLAST of Spo20523.1 vs. NCBI nr
Match: gi|902191899|gb|KNA11944.1| (hypothetical protein SOVF_130510 [Spinacia oleracea]) HSP 1 Score: 216.1 bits (549), Expect = 4.300e-53 Identity = 100/147 (68.03%), Postives = 122/147 (82.99%), Query Frame = 1
BLAST of Spo20523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ19_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_130500 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 8.200e-83 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of Spo20523.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBR2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g068790 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 3.300e-68 Identity = 124/154 (80.52%), Postives = 141/154 (91.56%), Query Frame = 1
BLAST of Spo20523.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E6H2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g068800 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.300e-56 Identity = 107/151 (70.86%), Postives = 127/151 (84.11%), Query Frame = 1
BLAST of Spo20523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXD4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_130510 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.000e-53 Identity = 100/147 (68.03%), Postives = 122/147 (82.99%), Query Frame = 1
BLAST of Spo20523.1 vs. UniProtKB/TrEMBL
Match: A0A058ZW22_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02472 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.000e-45 Identity = 94/154 (61.04%), Postives = 116/154 (75.32%), Query Frame = 1
BLAST of Spo20523.1 vs. ExPASy Swiss-Prot
Match: DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana GN=DIR21 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.900e-38 Identity = 73/146 (50.00%), Postives = 102/146 (69.86%), Query Frame = 1
BLAST of Spo20523.1 vs. ExPASy Swiss-Prot
Match: DIR2_ARATH (Dirigent protein 2 OS=Arabidopsis thaliana GN=DIR2 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.700e-36 Identity = 72/145 (49.66%), Postives = 98/145 (67.59%), Query Frame = 1
BLAST of Spo20523.1 vs. ExPASy Swiss-Prot
Match: DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana GN=DIR11 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.100e-35 Identity = 69/146 (47.26%), Postives = 100/146 (68.49%), Query Frame = 1
BLAST of Spo20523.1 vs. ExPASy Swiss-Prot
Match: DIR1_ARATH (Dirigent protein 1 OS=Arabidopsis thaliana GN=DIR1 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.700e-33 Identity = 73/150 (48.67%), Postives = 96/150 (64.00%), Query Frame = 1
BLAST of Spo20523.1 vs. ExPASy Swiss-Prot
Match: DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana GN=DIR3 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.200e-33 Identity = 76/154 (49.35%), Postives = 100/154 (64.94%), Query Frame = 1
BLAST of Spo20523.1 vs. TAIR (Arabidopsis)
Match: AT1G65870.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 159.1 bits (401), Expect = 2.200e-39 Identity = 73/146 (50.00%), Postives = 102/146 (69.86%), Query Frame = 1
BLAST of Spo20523.1 vs. TAIR (Arabidopsis)
Match: AT5G42500.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 153.7 bits (387), Expect = 9.300e-38 Identity = 72/145 (49.66%), Postives = 98/145 (67.59%), Query Frame = 1
BLAST of Spo20523.1 vs. TAIR (Arabidopsis)
Match: AT1G22900.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 147.9 bits (372), Expect = 5.100e-36 Identity = 69/146 (47.26%), Postives = 100/146 (68.49%), Query Frame = 1
BLAST of Spo20523.1 vs. TAIR (Arabidopsis)
Match: AT5G42510.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 143.7 bits (361), Expect = 9.700e-35 Identity = 73/150 (48.67%), Postives = 96/150 (64.00%), Query Frame = 1
BLAST of Spo20523.1 vs. TAIR (Arabidopsis)
Match: AT5G49040.1 (Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 143.3 bits (360), Expect = 1.300e-34 Identity = 76/154 (49.35%), Postives = 100/154 (64.94%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20523.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20523.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20523.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo20523.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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