Spo20326 (gene)

Overview
NameSpo20326
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionF-box protein SKIP31
LocationSpoScf_00060 : 211917 .. 212384 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCACACAGAGCAGCAATGATGTCCGGTTCCTCAAATGTTGTCTTTATGTCAAGTATTCTGGGTCAGGATGGGACAAACCCGGGTCACAAGTGTGATTGGAAATGTCAAAACGAGCACGTCTGTGGAAATATGTTCCGATGCAGGCTTACCGGACAGACCCATATTTGTGACAAAAACTGTAACCAGCGAATTCTGTACGGTAATCACAACTCACTGTGCAGAGTCAGTGGACAGATTTTCCCACTTACACCTACGGAGCAGCAAGCAACTAGAGGTGTTCGTAAGAAGTTTGAAGCCGAGGCTTCCTCTTCCGAGACCTGTTCTTTCAAGCGTCGGCGTGATTCAAATTTACATCCTTCGCCTTTCGAGAGATCATTTTCTGCTGTCAGCCCTATCTGCAGTCAAGTTGGAGATGGAATGCTGAGATATGGCTATTTATTGTGTTCTATGAAGGTGTCTTAA

mRNA sequence

ATGGAGGCACACAGAGCAGCAATGATGTCCGGTTCCTCAAATGTTGTCTTTATGTCAAGTATTCTGGGTCAGGATGGGACAAACCCGGGTCACAAGTGTGATTGGAAATGTCAAAACGAGCACGTCTGTGGAAATATGTTCCGATGCAGGCTTACCGGACAGACCCATATTTGTGACAAAAACTGTAACCAGCGAATTCTGTACGGTAATCACAACTCACTGTGCAGAGTCAGTGGACAGATTTTCCCACTTACACCTACGGAGCAGCAAGCAACTAGAGGTGTTCGTAAGAAGTTTGAAGCCGAGGCTTCCTCTTCCGAGACCTGTTCTTTCAAGCGTCGGCGTGATTCAAATTTACATCCTTCGCCTTTCGAGAGATCATTTTCTGCTGTCAGCCCTATCTGCAGTCAAGTTGGAGATGGAATGCTGAGATATGGCTATTTATTGTGTTCTATGAAGGTGTCTTAA

Coding sequence (CDS)

ATGGAGGCACACAGAGCAGCAATGATGTCCGGTTCCTCAAATGTTGTCTTTATGTCAAGTATTCTGGGTCAGGATGGGACAAACCCGGGTCACAAGTGTGATTGGAAATGTCAAAACGAGCACGTCTGTGGAAATATGTTCCGATGCAGGCTTACCGGACAGACCCATATTTGTGACAAAAACTGTAACCAGCGAATTCTGTACGGTAATCACAACTCACTGTGCAGAGTCAGTGGACAGATTTTCCCACTTACACCTACGGAGCAGCAAGCAACTAGAGGTGTTCGTAAGAAGTTTGAAGCCGAGGCTTCCTCTTCCGAGACCTGTTCTTTCAAGCGTCGGCGTGATTCAAATTTACATCCTTCGCCTTTCGAGAGATCATTTTCTGCTGTCAGCCCTATCTGCAGTCAAGTTGGAGATGGAATGCTGAGATATGGCTATTTATTGTGTTCTATGAAGGTGTCTTAA

Protein sequence

MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDKNCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLHPSPFERSFSAVSPICSQVGDGMLRYGYLLCSMKVS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20326.1Spo20326.1mRNA


Homology
BLAST of Spo20326.1 vs. NCBI nr
Match: gi|902146699|gb|KNA05092.1| (hypothetical protein SOVF_193580 [Spinacia oleracea])

HSP 1 Score: 327.4 bits (838), Expect = 1.300e-86
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1

		  

Query: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60
           MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK
Sbjct: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60

Query: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH 120
           NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH
Sbjct: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH 120

Query: 121 PSPFERSFSAVSPICSQVGDGMLRYGYLLCSMKVS 156
           PSPFERSFSAVSPICSQVGDGMLRYGYLLCSMKVS
Sbjct: 121 PSPFERSFSAVSPICSQVGDGMLRYGYLLCSMKVS 155

BLAST of Spo20326.1 vs. NCBI nr
Match: gi|902233960|gb|KNA23274.1| (hypothetical protein SOVF_026460 [Spinacia oleracea])

HSP 1 Score: 297.7 bits (761), Expect = 1.100e-77
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 1

		  

Query: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60
           MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK
Sbjct: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60

Query: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH 120
           NCNQRILYGNHNSLCRVSGQIFPLTPTEQQA RGVR+KFEAEASSSETCSFKRRRDSNLH
Sbjct: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQAARGVRRKFEAEASSSETCSFKRRRDSNLH 120

Query: 121 PSPFERSFSAVSPICSQVGDGM 143
           PSPFERSFSAVSPICSQVGDGM
Sbjct: 121 PSPFERSFSAVSPICSQVGDGM 142

BLAST of Spo20326.1 vs. NCBI nr
Match: gi|870865374|gb|KMT16430.1| (hypothetical protein BVRB_3g050560 isoform A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 285.8 bits (730), Expect = 4.500e-74
Identity = 133/148 (89.86%), Postives = 139/148 (93.92%), Query Frame = 1

		  

Query: 8   MMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDKNCNQRIL 67
           MM+GSSNVVFMSSILGQDG NPGHKCDWKCQNEHVCGNM+RCRLTG THICDKNCNQRIL
Sbjct: 1   MMTGSSNVVFMSSILGQDGPNPGHKCDWKCQNEHVCGNMYRCRLTGLTHICDKNCNQRIL 60

Query: 68  YGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLHPSPFERS 127
           YGNHNSLCRVSGQ+FPLTP EQQA RGVR+KFEAEA  SE+CSFKRRRD+NLHPSPFERS
Sbjct: 61  YGNHNSLCRVSGQMFPLTPMEQQAARGVRRKFEAEACPSESCSFKRRRDANLHPSPFERS 120

Query: 128 FSAVSPICSQVGDGMLRYGYLLCSMKVS 156
           FSAVSPICSQVGD M RYGYL CSMKVS
Sbjct: 121 FSAVSPICSQVGDEMQRYGYLWCSMKVS 148

BLAST of Spo20326.1 vs. NCBI nr
Match: gi|731321298|ref|XP_010671276.1| (PREDICTED: uncharacterized protein LOC104888109 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 280.4 bits (716), Expect = 1.900e-72
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 1

		  

Query: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60
           MEAHRAAMM+GSSNVVFMSSILGQDG NPGHKCDWKCQNEHVCGNM+RCRLTG THICDK
Sbjct: 1   MEAHRAAMMTGSSNVVFMSSILGQDGPNPGHKCDWKCQNEHVCGNMYRCRLTGLTHICDK 60

Query: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH 120
           NCNQRILYGNHNSLCRVSGQ+FPLTP EQQA RGVR+KFEAEA  SE+CSFKRRRD+NLH
Sbjct: 61  NCNQRILYGNHNSLCRVSGQMFPLTPMEQQAARGVRRKFEAEACPSESCSFKRRRDANLH 120

Query: 121 PSPFERSFSAVSPICSQVGDGM 143
           PSPFERSFSAVSPICSQVGDGM
Sbjct: 121 PSPFERSFSAVSPICSQVGDGM 142

BLAST of Spo20326.1 vs. NCBI nr
Match: gi|870865375|gb|KMT16431.1| (hypothetical protein BVRB_3g050560 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 266.9 bits (681), Expect = 2.200e-68
Identity = 123/135 (91.11%), Postives = 129/135 (95.56%), Query Frame = 1

		  

Query: 8   MMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDKNCNQRIL 67
           MM+GSSNVVFMSSILGQDG NPGHKCDWKCQNEHVCGNM+RCRLTG THICDKNCNQRIL
Sbjct: 1   MMTGSSNVVFMSSILGQDGPNPGHKCDWKCQNEHVCGNMYRCRLTGLTHICDKNCNQRIL 60

Query: 68  YGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLHPSPFERS 127
           YGNHNSLCRVSGQ+FPLTP EQQA RGVR+KFEAEA  SE+CSFKRRRD+NLHPSPFERS
Sbjct: 61  YGNHNSLCRVSGQMFPLTPMEQQAARGVRRKFEAEACPSESCSFKRRRDANLHPSPFERS 120

Query: 128 FSAVSPICSQVGDGM 143
           FSAVSPICSQVGDGM
Sbjct: 121 FSAVSPICSQVGDGM 135

BLAST of Spo20326.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCU7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193580 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 9.400e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1

		  

Query: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60
           MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK
Sbjct: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60

Query: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH 120
           NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH
Sbjct: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH 120

Query: 121 PSPFERSFSAVSPICSQVGDGMLRYGYLLCSMKVS 156
           PSPFERSFSAVSPICSQVGDGMLRYGYLLCSMKVS
Sbjct: 121 PSPFERSFSAVSPICSQVGDGMLRYGYLLCSMKVS 155

BLAST of Spo20326.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWI5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026460 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 8.000e-78
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 1

		  

Query: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60
           MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK
Sbjct: 1   MEAHRAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDK 60

Query: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLH 120
           NCNQRILYGNHNSLCRVSGQIFPLTPTEQQA RGVR+KFEAEASSSETCSFKRRRDSNLH
Sbjct: 61  NCNQRILYGNHNSLCRVSGQIFPLTPTEQQAARGVRRKFEAEASSSETCSFKRRRDSNLH 120

Query: 121 PSPFERSFSAVSPICSQVGDGM 143
           PSPFERSFSAVSPICSQVGDGM
Sbjct: 121 PSPFERSFSAVSPICSQVGDGM 142

BLAST of Spo20326.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRM5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050560 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.100e-74
Identity = 133/148 (89.86%), Postives = 139/148 (93.92%), Query Frame = 1

		  

Query: 8   MMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDKNCNQRIL 67
           MM+GSSNVVFMSSILGQDG NPGHKCDWKCQNEHVCGNM+RCRLTG THICDKNCNQRIL
Sbjct: 1   MMTGSSNVVFMSSILGQDGPNPGHKCDWKCQNEHVCGNMYRCRLTGLTHICDKNCNQRIL 60

Query: 68  YGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLHPSPFERS 127
           YGNHNSLCRVSGQ+FPLTP EQQA RGVR+KFEAEA  SE+CSFKRRRD+NLHPSPFERS
Sbjct: 61  YGNHNSLCRVSGQMFPLTPMEQQAARGVRRKFEAEACPSESCSFKRRRDANLHPSPFERS 120

Query: 128 FSAVSPICSQVGDGMLRYGYLLCSMKVS 156
           FSAVSPICSQVGD M RYGYL CSMKVS
Sbjct: 121 FSAVSPICSQVGDEMQRYGYLWCSMKVS 148

BLAST of Spo20326.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKI9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050560 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.500e-68
Identity = 123/135 (91.11%), Postives = 129/135 (95.56%), Query Frame = 1

		  

Query: 8   MMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDKNCNQRIL 67
           MM+GSSNVVFMSSILGQDG NPGHKCDWKCQNEHVCGNM+RCRLTG THICDKNCNQRIL
Sbjct: 1   MMTGSSNVVFMSSILGQDGPNPGHKCDWKCQNEHVCGNMYRCRLTGLTHICDKNCNQRIL 60

Query: 68  YGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLHPSPFERS 127
           YGNHNSLCRVSGQ+FPLTP EQQA RGVR+KFEAEA  SE+CSFKRRRD+NLHPSPFERS
Sbjct: 61  YGNHNSLCRVSGQMFPLTPMEQQAARGVRRKFEAEACPSESCSFKRRRDANLHPSPFERS 120

Query: 128 FSAVSPICSQVGDGM 143
           FSAVSPICSQVGDGM
Sbjct: 121 FSAVSPICSQVGDGM 135

BLAST of Spo20326.1 vs. UniProtKB/TrEMBL
Match: K4Q0G5_BETVU (Uncharacterized protein OS=Beta vulgaris PE=4 SV=2)

HSP 1 Score: 240.0 bits (611), Expect = 2.000e-60
Identity = 110/122 (90.16%), Postives = 116/122 (95.08%), Query Frame = 1

		  

Query: 9   MSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDKNCNQRILY 68
           M+GSSNVVFMSSILGQDG NPGHKCDWKCQNEHVCGNM+RCRLTG THICDKNCNQRILY
Sbjct: 1   MTGSSNVVFMSSILGQDGPNPGHKCDWKCQNEHVCGNMYRCRLTGLTHICDKNCNQRILY 60

Query: 69  GNHNSLCRVSGQIFPLTPTEQQATRGVRKKFEAEASSSETCSFKRRRDSNLHPSPFERSF 128
           GNHNSLCRVSGQ+FPLTP EQQA RGVR+KFEAEA  SE+CSFKRRRD+NLHPSPFERSF
Sbjct: 61  GNHNSLCRVSGQMFPLTPMEQQAARGVRRKFEAEACPSESCSFKRRRDANLHPSPFERSF 120

Query: 129 SA 131
           SA
Sbjct: 121 SA 122

BLAST of Spo20326.1 vs. TAIR (Arabidopsis)
Match: AT5G24610.1 (unknown protein)

HSP 1 Score: 197.6 bits (501), Expect = 5.700e-51
Identity = 92/140 (65.71%), Postives = 117/140 (83.57%), Query Frame = 1

		  

Query: 5   RAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDKNCNQ 64
           ++ M+  S+NV+++S+ILG+D    GHKCDWKC+NE+VCGNM+RC+LTG TH+CDKNCNQ
Sbjct: 6   KSPMVVTSANVIYLSAILGRDCD--GHKCDWKCENENVCGNMYRCKLTGLTHVCDKNCNQ 65

Query: 65  RILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKFE-AEASSSETCSFK-RRRDSNLHPS 124
           RILY NH+SLCR SG+IFPL+  E+QA +GVR+K + AE+  SE+CSFK RRRD+  H S
Sbjct: 66  RILYDNHSSLCRASGRIFPLSSVEEQAVKGVRRKLDAAESHPSESCSFKRRRRDAQFHAS 125

Query: 125 PFERSFSAVSPICSQVGDGM 143
           PFERSF+AVSPICS  GDGM
Sbjct: 126 PFERSFTAVSPICSPAGDGM 143

BLAST of Spo20326.1 vs. TAIR (Arabidopsis)
Match: AT3G49550.1 (unknown protein)

HSP 1 Score: 194.1 bits (492), Expect = 6.300e-50
Identity = 89/141 (63.12%), Postives = 115/141 (81.56%), Query Frame = 1

		  

Query: 5   RAAMMSGSSNVVFMSSILGQDGTNPGHKCDWKCQNEHVCGNMFRCRLTGQTHICDKNCNQ 64
           ++ ++ GS+NV+++S+ILG +G  P HKCDWKC+NE+VCGNM+RC+LTG TH+CDKNCNQ
Sbjct: 6   KSHVVVGSANVIYLSAILGHEG--PNHKCDWKCENENVCGNMYRCKLTGLTHVCDKNCNQ 65

Query: 65  RILYGNHNSLCRVSGQIFPLTPTEQQATRGVRKKF--EAEASSSETCSFKRRRDSNLHPS 124
           RILY NHNSLCR SG+IFPL+  E+QA +GVR+K   E++   SE+C  +RRRD+  H S
Sbjct: 66  RILYDNHNSLCRASGRIFPLSLVEEQAVKGVRRKLDDESQQQPSESCVKRRRRDAQFHSS 125

Query: 125 PFERSFSAVSPICSQV-GDGM 143
           PFERSF+AVSP CSQ  GDGM
Sbjct: 126 PFERSFAAVSPFCSQAGGDGM 144

The following BLAST results are available for this feature:
BLAST of Spo20326.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902146699|gb|KNA05092.1|1.3e-86100.hypothetical protein SOVF_1935... [more]
gi|902233960|gb|KNA23274.1|1.1e-7798.5hypothetical protein SOVF_0264... [more]
gi|870865374|gb|KMT16430.1|4.5e-7489.8hypothetical protein BVRB_3g05... [more]
gi|731321298|ref|XP_010671276.1|1.9e-7291.5PREDICTED: uncharacterized pro... [more]
gi|870865375|gb|KMT16431.1|2.2e-6891.1hypothetical protein BVRB_3g05... [more]
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BLAST of Spo20326.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QCU7_SPIOL9.4e-87100.Uncharacterized protein OS=Spi... [more]
A0A0K9RWI5_SPIOL8.0e-7898.5Uncharacterized protein OS=Spi... [more]
A0A0J8CRM5_BETVU3.1e-7489.8Uncharacterized protein OS=Bet... [more]
A0A0J8FKI9_BETVU1.5e-6891.1Uncharacterized protein OS=Bet... [more]
K4Q0G5_BETVU2.0e-6090.1Uncharacterized protein OS=Bet... [more]
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BLAST of Spo20326.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20326.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G24610.15.7e-5165.7unknown protein[more]
AT3G49550.16.3e-5063.1unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36372FAMILY NOT NAMEDcoord: 2..145
score: 4.0
NoneNo IPR availablePANTHERPTHR36372:SF1SUBFAMILY NOT NAMEDcoord: 2..145
score: 4.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042742 defense response to bacterium
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0000741 karyogamy
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006950 response to stress
biological_process GO:0006979 response to oxidative stress
biological_process GO:0010167 response to nitrate
biological_process GO:0009408 response to heat
biological_process GO:0015706 nitrate transport
biological_process GO:0006826 iron ion transport
biological_process GO:0010106 cellular response to iron ion starvation
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0050896 response to stimulus
biological_process GO:0048507 meristem development
biological_process GO:0005982 starch metabolic process
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0009723 response to ethylene
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0009733 response to auxin
biological_process GO:0009414 response to water deprivation
biological_process GO:0006012 galactose metabolic process
biological_process GO:0009611 response to wounding
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0032259 methylation
biological_process GO:0006364 rRNA processing
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006457 protein folding
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0046786 viral replication complex formation and maintenance
biological_process GO:0006914 autophagy
biological_process GO:0042176 regulation of protein catabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009651 response to salt stress
biological_process GO:0006606 protein import into nucleus
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006310 DNA recombination
biological_process GO:0042128 nitrate assimilation
biological_process GO:0016310 phosphorylation
biological_process GO:0071215 cellular response to abscisic acid stimulus
biological_process GO:0042256 mature ribosome assembly
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0042273 ribosomal large subunit biogenesis
biological_process GO:0006281 DNA repair
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0051301 cell division
biological_process GO:0048825 cotyledon development
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0032264 IMP salvage
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0098655 cation transmembrane transport
biological_process GO:0009308 amine metabolic process
biological_process GO:0009640 photomorphogenesis
biological_process GO:0030488 tRNA methylation
biological_process GO:0000338 protein deneddylation
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0043687 post-translational protein modification
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0042753 positive regulation of circadian rhythm
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0016567 protein ubiquitination
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0009933 meristem structural organization
biological_process GO:0019915 lipid storage
biological_process GO:0016571 histone methylation
biological_process GO:0009909 regulation of flower development
biological_process GO:0010114 response to red light
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0007155 cell adhesion
biological_process GO:0045010 actin nucleation
biological_process GO:0006396 RNA processing
biological_process GO:0070475 rRNA base methylation
biological_process GO:0006833 water transport
biological_process GO:0016579 protein deubiquitination
biological_process GO:0010093 specification of floral organ identity
biological_process GO:0010162 seed dormancy process
biological_process GO:0006972 hyperosmotic response
biological_process GO:0006102 isocitrate metabolic process
biological_process GO:0006739 NADP metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0006508 proteolysis
biological_process GO:0009853 photorespiration
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009845 seed germination
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0007030 Golgi organization
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0051049 regulation of transport
biological_process GO:0006096 glycolytic process
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0050826 response to freezing
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0009705 plant-type vacuole membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0031307 integral component of mitochondrial outer membrane
cellular_component GO:0000502 proteasome complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0048046 apoplast
cellular_component GO:0016607 nuclear speck
cellular_component GO:0005737 cytoplasm
cellular_component GO:0017177 glucosidase II complex
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005777 peroxisome
cellular_component GO:0016020 membrane
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0044464 cell part
cellular_component GO:0031012 extracellular matrix
cellular_component GO:0005730 nucleolus
molecular_function GO:0016887 ATPase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0043424 protein histidine kinase binding
molecular_function GO:0003876 AMP deaminase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0004197 cysteine-type endopeptidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0005488 binding
molecular_function GO:0030234 enzyme regulator activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0016629 12-oxophytodienoate reductase activity
molecular_function GO:0004558 alpha-1,4-glucosidase activity
molecular_function GO:0008324 cation transmembrane transporter activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016174 NAD(P)H oxidase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0043023 ribosomal large subunit binding
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0016740 transferase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004450 isocitrate dehydrogenase (NADP+) activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0032450 maltose alpha-glucosidase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0016874 ligase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo236900.77Barchart | Table
Spo223230.77Barchart | Table
Spo124030.77Barchart | Table
Spo081240.76Barchart | Table
Spo238500.75Barchart | Table
Spo087850.74Barchart | Table
Spo265440.74Barchart | Table
Spo232920.73Barchart | Table
Spo037390.73Barchart | Table
Spo220230.73Barchart | Table
Spo096190.73Barchart | Table
Spo243270.72Barchart | Table
Spo006370.72Barchart | Table
Spo245030.72Barchart | Table
Spo180520.72Barchart | Table
Spo059080.72Barchart | Table
Spo189860.71Barchart | Table
Spo189070.71Barchart | Table
Spo013140.71Barchart | Table
Spo031050.71Barchart | Table
Spo035270.71Barchart | Table
Spo150070.71Barchart | Table
Spo087560.70Barchart | Table
Spo102690.70Barchart | Table
Spo268510.70Barchart | Table
Spo250990.70Barchart | Table
Spo022390.70Barchart | Table
Spo164600.70Barchart | Table
Spo063430.69Barchart | Table
Spo268500.69Barchart | Table
Spo257480.69Barchart | Table
Spo111950.69Barchart | Table
Spo184490.69Barchart | Table
Spo189470.69Barchart | Table
Spo246350.68Barchart | Table
Spo013080.68Barchart | Table
Spo044300.68Barchart | Table
Spo052300.68Barchart | Table
Spo153880.68Barchart | Table
Spo197730.68Barchart | Table
Spo212790.68Barchart | Table
Spo212800.68Barchart | Table
Spo227120.68Barchart | Table
Spo249310.68Barchart | Table
Spo258860.68Barchart | Table
Spo019330.67Barchart | Table
Spo187400.67Barchart | Table
Spo034730.67Barchart | Table
Spo201840.67Barchart | Table
Spo244530.67Barchart | Table
Spo116030.67Barchart | Table
Spo042420.67Barchart | Table
Spo197520.66Barchart | Table
Spo200530.66Barchart | Table
Spo257570.66Barchart | Table
Spo010880.66Barchart | Table
Spo215420.66Barchart | Table
Spo143800.66Barchart | Table
Spo228380.66Barchart | Table
Spo011140.66Barchart | Table
Spo176280.66Barchart | Table
Spo163210.66Barchart | Table
Spo002420.65Barchart | Table
Spo163670.65Barchart | Table
Spo022750.65Barchart | Table
Spo143660.65Barchart | Table
Spo224100.65Barchart | Table
Spo168170.65Barchart | Table
Spo082000.65Barchart | Table
Spo120640.65Barchart | Table
Spo018060.65Barchart | Table