Spo20225 (gene)

Overview
NameSpo20225
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSulfite exporter TauE/SafE family protein
LocationSpoScf_00073 : 356777 .. 358310 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATTTCCGGCGCTCCCTTTTCTCTCTCCTCGCGAGTTCCTATCAGGAGCTCCTTATTATCTCTCCTCCATTTTTTCTCTCCTTCGTGATTCTCTCTCCTCACTTGCTGCAACCACCGCGCCACCACCTTCTCCACGCTTCCACCATCCACCGTGCCGGAACTATCACCACCCTTCCATTTCCGACCGCCACCATATCTACGCCTTCTCCTATTGTGAGTTAATTTTAGGGTTTTATTAAATTTTAGGGTTGTAGTTCCTCTCAAAATTTGATGCAATTATTCACTTGTTATATATGATTAGGGAGGATTGAAGAAATTGTGAAAATTTTCTCGCAAAATCCACTACTCCGCGCGCCGCCACCACTCCGCTGACCGCCATCATATCTACGCCTTCTCCTCTGGTGAGTTATTTTTAGTGTTTCCTTAAAATTTTAGGGTTAGATAATGTGTTTTACTTATGTTTAATTGTAGTTCCTGTCGAAATTTGTTGCAATTGAGTAGGCTGTTGATAGTTATTTCCTGTGATATGGGTTGATAATTACAGTGTTGTTTAGTTAAATTGGTTAAATTGATTAAATTGAAGCTCCTCAAATGTTTGCTAATTTTGGATTGTTGACATGGATGAGCAAATACTTTTATAATTCTTTCATGTCCTGCTTCTGCTCATTGTGTTGTAGCTGCAATTATTATAGAAGGATATGCATGTTAAGTTTATGTTTATTTGTTCGAATTATGGGGATACTTCCTTTTCAGAGTTCTGATTTCAAACTGCAACTGCTATATCAAAATGTAAGGTTTTAACCTTATTATATTGCCTTCCATAAATCCTAGGAGTACGCTGACAACTGTGAAATGTTACAAGGAATCTTGGTCAAATTTTTATGAACTTTGATCCTTCCTGCATGATGGAATATAAGTTGGATTCTTCTATTTACTAAAAGTCACCTTTTTGTATTTCCAGTGTTTTGTGTTTGCGGGTATTTTCTTGTTCGATAATAAGGTACGCGATATTGTAGCAGTTGAATATGATGTTAGAGTGATTCTGTTTAATCTTCAGGTATGATAATGGGTAATGCAGCCTCAAATGTGTTCTACAATCTGAAACTAAGGCATCCAACACTTGATATGCCGATCATTGATTATGACTTAGCTCTGTTTTTTCAGCCTATGCTCATGCTAGGAATTAGTGCTGGTGTTACTTCTAATGTGATTTTTGCTGACTGGATGGTCATTGTCCTGCTGATCATTCTTTTCTTTGGTAATATTTGTAGTGTTGTTACCTAGTTTTGTATGTTTTTGTTCTGATTGCATGGCGGCCTTATGAGCTGACTATCCGTAGGCACATATTTTAAGGCGGTTGTCATCTTGTTGTTGATTCGTCTCTTTTTTAGATTTTGGAGCTCACTAAATTACTGTATTACTATTAACTTTGTTGTTTATGGTAGATTTTGATTCGTTGTTTAGTCAAGATAACTGACAGTTGTAGATTAGGCCTCAGGTCGAGTCCTTGACTTAGCTAGTGATTAGGGGGGG

mRNA sequence

TGATTTCCGGCGCTCCCTTTTCTCTCTCCTCGCGAGTTCCTATCAGGAGCTCCTTATTATCTCTCCTCCATTTTTTCTCTCCTTCGTGATTCTCTCTCCTCACTTGCTGCAACCACCGCGCCACCACCTTCTCCACGCTTCCACCATCCACCGTGCCGGAACTATCACCACCCTTCCATTTCCGACCGCCACCATATCTACGCCTTCTCCTATTGGAGGATTGAAGAAATTGTGAAAATTTTCTCGCAAAATCCACTACTCCGCGCGCCGCCACCACTCCGCTGACCGCCATCATATCTACGCCTTCTCCTCTGATGATAATGGGTAATGCAGCCTCAAATGTGTTCTACAATCTGAAACTAAGGCATCCAACACTTGATATGCCGATCATTGATTATGACTTAGCTCTGTTTTTTCAGCCTATGCTCATGCTAGGAATTAGTGCTGGTGTTACTTCTAATGTGATTTTTGCTGACTGGATGGTCATTGTCCTGCTGATCATTCTTTTCTTTGGTAATATTTGTAGTGTTGTTACCTAGTTTTGTATGTTTTTGTTCTGATTGCATGGCGGCCTTATGAGCTGACTATCCGTAGGCACATATTTTAAGGCGGTTGTCATCTTGTTGTTGATTCGTCTCTTTTTTAGATTTTGGAGCTCACTAAATTACTGTATTACTATTAACTTTGTTGTTTATGGTAGATTTTGATTCGTTGTTTAGTCAAGATAACTGACAGTTGTAGATTAGGCCTCAGGTCGAGTCCTTGACTTAGCTAGTGATTAGGGGGGG

Coding sequence (CDS)

ATGATAATGGGTAATGCAGCCTCAAATGTGTTCTACAATCTGAAACTAAGGCATCCAACACTTGATATGCCGATCATTGATTATGACTTAGCTCTGTTTTTTCAGCCTATGCTCATGCTAGGAATTAGTGCTGGTGTTACTTCTAATGTGATTTTTGCTGACTGGATGGTCATTGTCCTGCTGATCATTCTTTTCTTTGGTAATATTTGTAGTGTTGTTACCTAG

Protein sequence

MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVLLIILFFGNICSVVT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20225.1Spo20225.1mRNA


Homology
[Close]
BLAST of Spo20225.1 vs. NCBI nr
Match: gi|902230183|gb|KNA21758.1| (hypothetical protein SOVF_040540 [Spinacia oleracea])

HSP 1 Score: 114.4 bits (285), Expect = 8.600e-23
Identity = 59/67 (88.06%), Postives = 60/67 (89.55%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG AA+ VFYNLKLRHPTLDMPIIDYDLAL FQPMLMLGIS GVT NVIFADWMV VL
Sbjct: 102 MIMGAAAATVFYNLKLRHPTLDMPIIDYDLALLFQPMLMLGISVGVTFNVIFADWMVTVL 161

Query: 61  LIILFFG 68
           LIILF G
Sbjct: 162 LIILFIG 168
[Close]
BLAST of Spo20225.1 vs. NCBI nr
Match: gi|731317148|ref|XP_010667904.1| (PREDICTED: uncharacterized protein LOC104884897 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 113.2 bits (282), Expect = 1.900e-22
Identity = 58/67 (86.57%), Postives = 60/67 (89.55%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG AAS VFYN+KL+HPTLDMPIIDYDLAL FQPMLMLGIS GVT NVIFADWMV VL
Sbjct: 132 MIMGAAASTVFYNMKLKHPTLDMPIIDYDLALLFQPMLMLGISIGVTFNVIFADWMVTVL 191

Query: 61  LIILFFG 68
           LIILF G
Sbjct: 192 LIILFIG 198
[Close]
BLAST of Spo20225.1 vs. NCBI nr
Match: gi|731317150|ref|XP_010667910.1| (PREDICTED: uncharacterized protein LOC104884897 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 113.2 bits (282), Expect = 1.900e-22
Identity = 58/67 (86.57%), Postives = 60/67 (89.55%), Query Frame = 1 

		  

Query: 1  MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
          MIMG AAS VFYN+KL+HPTLDMPIIDYDLAL FQPMLMLGIS GVT NVIFADWMV VL
Sbjct: 1  MIMGAAASTVFYNMKLKHPTLDMPIIDYDLALLFQPMLMLGISIGVTFNVIFADWMVTVL 60

Query: 61 LIILFFG 68
          LIILF G
Sbjct: 61 LIILFIG 67
[Close]
BLAST of Spo20225.1 vs. NCBI nr
Match: gi|719980182|ref|XP_010249715.1| (PREDICTED: uncharacterized protein LOC104592187 [Nelumbo nucifera])

HSP 1 Score: 112.1 bits (279), Expect = 4.200e-22
Identity = 58/67 (86.57%), Postives = 59/67 (88.06%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG AAS V+YNLKLRHPTLDMPIIDYDLAL FQPMLMLGIS GV  NVIFADWMV VL
Sbjct: 127 MIMGAAASTVYYNLKLRHPTLDMPIIDYDLALLFQPMLMLGISIGVAFNVIFADWMVTVL 186

Query: 61  LIILFFG 68
           LIILF G
Sbjct: 187 LIILFIG 193
[Close]
BLAST of Spo20225.1 vs. NCBI nr
Match: gi|976913628|gb|KVH99877.1| (hypothetical protein Ccrd_021881 [Cynara cardunculus var. scolymus])

HSP 1 Score: 111.3 bits (277), Expect = 7.200e-22
Identity = 58/67 (86.57%), Postives = 59/67 (88.06%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG AAS VFYNLKLRHPTLDMPIIDYDLAL  QPMLMLGIS GV+ NVIFADWMV VL
Sbjct: 122 MIMGAAASTVFYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVSFNVIFADWMVTVL 181

Query: 61  LIILFFG 68
           LIILF G
Sbjct: 182 LIILFIG 188
[Close]
BLAST of Spo20225.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQK0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040540 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.000e-23
Identity = 59/67 (88.06%), Postives = 60/67 (89.55%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG AA+ VFYNLKLRHPTLDMPIIDYDLAL FQPMLMLGIS GVT NVIFADWMV VL
Sbjct: 102 MIMGAAAATVFYNLKLRHPTLDMPIIDYDLALLFQPMLMLGISVGVTFNVIFADWMVTVL 161

Query: 61  LIILFFG 68
           LIILF G
Sbjct: 162 LIILFIG 168
[Close]
BLAST of Spo20225.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1W9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g031870 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.300e-22
Identity = 58/67 (86.57%), Postives = 60/67 (89.55%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG AAS VFYN+KL+HPTLDMPIIDYDLAL FQPMLMLGIS GVT NVIFADWMV VL
Sbjct: 132 MIMGAAASTVFYNMKLKHPTLDMPIIDYDLALLFQPMLMLGISIGVTFNVIFADWMVTVL 191

Query: 61  LIILFFG 68
           LIILF G
Sbjct: 192 LIILFIG 198
[Close]
BLAST of Spo20225.1 vs. UniProtKB/TrEMBL
Match: A0A118JZF0_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021881 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.100e-22
Identity = 58/67 (86.57%), Postives = 59/67 (88.06%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG AAS VFYNLKLRHPTLDMPIIDYDLAL  QPMLMLGIS GV+ NVIFADWMV VL
Sbjct: 122 MIMGAAASTVFYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVSFNVIFADWMVTVL 181

Query: 61  LIILFFG 68
           LIILF G
Sbjct: 182 LIILFIG 188
[Close]
BLAST of Spo20225.1 vs. UniProtKB/TrEMBL
Match: W1NTQ6_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00109p00047950 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.100e-22
Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG A S V+YNLKLRHPTLD+PIIDYDLAL FQPMLMLGIS GV  NVIFADWMV VL
Sbjct: 124 MIMGAAGSTVYYNLKLRHPTLDVPIIDYDLALLFQPMLMLGISIGVAFNVIFADWMVTVL 183

Query: 61  LIILFFG 68
           LIILFFG
Sbjct: 184 LIILFFG 190
[Close]
BLAST of Spo20225.1 vs. UniProtKB/TrEMBL
Match: W1NPH2_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00109p00049700 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.100e-22
Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG A S V+YNLKLRHPTLD+PIIDYDLAL FQPMLMLGIS GVT NVIFADWMV VL
Sbjct: 124 MIMGAAGSTVYYNLKLRHPTLDLPIIDYDLALLFQPMLMLGISIGVTFNVIFADWMVTVL 183

Query: 61  LIILFFG 68
           LIILF G
Sbjct: 184 LIILFIG 190
[Close]
BLAST of Spo20225.1 vs. TAIR (Arabidopsis)
Match: AT2G25737.1 (Sulfite exporter TauE/SafE family protein)

HSP 1 Score: 102.4 bits (254), Expect = 1.200e-22
Identity = 51/67 (76.12%), Postives = 56/67 (83.58%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG + S V+YNL+LRHPTLDMPIIDYDLAL  QPMLMLGIS GV  NVIF DW+V VL
Sbjct: 127 MIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTVL 186

Query: 61  LIILFFG 68
           LI+LF G
Sbjct: 187 LIVLFLG 193
[Close]
BLAST of Spo20225.1 vs. TAIR (Arabidopsis)
Match: AT2G36630.1 (Sulfite exporter TauE/SafE family protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.400e-18
Identity = 41/67 (61.19%), Postives = 58/67 (86.57%), Query Frame = 1 

		  

Query: 1   MIMGNAASNVFYNLKLRHPTLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIVL 60
           MIMG +AS+V+YN+++RHPT ++PI+DYDLAL FQPML+LGI+ GV+ +V+F  W++ VL
Sbjct: 107 MIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITVGVSLSVVFPYWLITVL 166

Query: 61  LIILFFG 68
           +IILF G
Sbjct: 167 IIILFVG 173
[Close]
BLAST of Spo20225.1 vs. TAIR (Arabidopsis)
Match: AT1G11540.1 (Sulfite exporter TauE/SafE family protein)

HSP 1 Score: 53.1 bits (126), Expect = 8.300e-8
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 1 

		  

Query: 1  MIMGNAASNVFYNLKLRHP-TLDMPIIDYDLALFFQPMLMLGISAGVTSNVIFADWMVIV 60
          M+ G + +NV  NL LR+P + D  +ID+DLAL  QP L+LG+S GV  N +F +W+V+ 
Sbjct: 19 MVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLGVSIGVICNRMFPNWLVLF 78

Query: 61 LLII 64
          L  +
Sbjct: 79 LFAV 82
The following BLAST results are available for this feature:
BLAST of Spo20225.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902230183|gb|KNA21758.1|8.6e-2388.0hypothetical protein SOVF_0405... [more]
gi|731317148|ref|XP_010667904.1|1.9e-2286.5PREDICTED: uncharacterized pro... [more]
gi|731317150|ref|XP_010667910.1|1.9e-2286.5PREDICTED: uncharacterized pro... [more]
gi|719980182|ref|XP_010249715.1|4.2e-2286.5PREDICTED: uncharacterized pro... [more]
gi|976913628|gb|KVH99877.1|7.2e-2286.5hypothetical protein Ccrd_0218... [more]
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BLAST of Spo20225.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RQK0_SPIOL6.0e-2388.0Uncharacterized protein OS=Spi... [more]
A0A0J8D1W9_BETVU1.3e-2286.5Uncharacterized protein OS=Bet... [more]
A0A118JZF0_CYNCS5.1e-2286.5Uncharacterized protein OS=Cyn... [more]
W1NTQ6_AMBTC5.1e-2285.0Uncharacterized protein OS=Amb... [more]
W1NPH2_AMBTC5.1e-2285.0Uncharacterized protein OS=Amb... [more]
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BLAST of Spo20225.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20225.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G25737.11.2e-2276.1Sulfite exporter TauE/SafE fam... [more]
AT2G36630.11.4e-1861.1Sulfite exporter TauE/SafE fam... [more]
AT1G11540.18.3e-845.3Sulfite exporter TauE/SafE fam... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14255ATP-DEPENDENT PROTEASE CEREBLONcoord: 1..67
score: 6.3
NoneNo IPR availablePANTHERPTHR14255:SF6SUBFAMILY NOT NAMEDcoord: 1..67
score: 6.3

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
RNA-Seq Expression