Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTGTGCCTCAGGTTATGTGGTTTGGGTGGGTTACTGTTGCTTTAGGGGAATCTGGGGTTGGGCAGAACTAGCATTGACGCAACACATAAAGTTGCTAGCAGATGATGAGTTTTTGAGCAAGTACTTTGGGACCAGAACTCTGAAAAGCGAATAAGATTTCAGTTACTGAAGCTCCTTTTTGCACCATGCATCCATACTGTTTCCCTCCATTGTCGATTTATATTGTGAACTTTGGCTTTTATTTTGTCCATTTGTTTGGAACTAGGTCTTACTCTAACTAATATTACTTTCTATAATTCATCTATGCGTAGTTTTCTAAACAATGTGATCATTTTTTTTTTGGATTCTTTTGTACTAATATTGTTATTGATATAACCCCCAATTGATATTTTAGACACGTCTCTCTAATAGGGGATTAATCTAATTTCTACACCATTATAATGTGTGTATTGAGATAAGACATTGCTCCTTCACTCTACTCTATGAGTTTGCTGTGCAATATTATAGAGTATGGTCCTTGCCTCCTTGCTGTTGAGTTACGCGGTTTCTTTTACATTATTGTTCATTTTTGTTTAAAACTGTTTTTGGTAGTTGAACAACTGATGCACCTTTGTTTTGTTGATAGCTTTCTCACTGAACAGTTTGTTATAATGTTATGCTGCGAGTAATATGTTTTTTGTCTTGTGCGAGACTTCTATGGAGCGGGCTTAATGTGCTACACTGATACTTGACGACTAGGTTTGTTATACCTTTCGGAATTTTAAAACTGAAAACCCAATTGGAAGTTTATAATAGGTATCTTGAGTATCTGTTCGGTTTGACATTCTGTCTCTTTTGTTGTTCATCCTCCTTATTTGTGTTAGGTTTATAAAAGATATAAAATGTACTGCCAACAAATGCAATCAGTTGTTACATCATTTGAATCTGTCGCGGGCCTTGGAAATGCTGCCCCATTTTTATGCTTTGCTCTTAGAGCCATGTTTAGGCATTTCCAGTGCTTAAAGAATGCCATTCTAGATCAAATTCGCGTTACTAGTTTTTCAATCACTGAAGCATAGATTCTATACAGGATCTTGTTAATATTCCATTCCTCAGTTTTAAATAAGTATGTCCCTTATGTTTTAGTCTTTTCACCTTGATTTGTGGATGCACTGTTGTGGACTTGTGGGGACTGCTGATTTGAGATCAATTTTGTAGTCAAATGGGTAAAGTGCTGCTTAGTAGAAACCTAGAGGGAGTGTGTGCTCTATTGTGAGTTTTTCCCAATAACATCTGAAATACTGAAACTATTTTGTTTATAAAAACTAAAGGGTTTTTGTTTGATTAATTCGGTGATAAAAAATGTCTGGTATACTTTAGTTAATAAAATAAGCTTAACTGATTTTTAATTTTGTTTACATGAACCCCAGTTGCCTAGCACATTGTCAGAGCATAGTTTGAAGTTCTTTTGTTTTTTCTTCTTTCTTGTGTGACTTGCAGAAAGTAAACAGGAGAATCGCATTGTGTCACCTGCCAAAGGAGAAGAGTTACATTCTGAAACAGCTCAAACTGAAGATGATCGTGATATACAAAAGGAAAATCAAGGATCGGATAACTTTGAATATCAATATGATGTGAAACTAAAAACTTGGATGCAGACCACTGATTTAGGCAATAATCACGAAGGGAGAAGTAGAAAATCGGTGTGCATATCCTTAATTTAAGTGATGATGAGAGAGTGAAGAAGAGAATCAGAAGGTATGCACCTGTAGAAGCCGAACAAAATGAATGGTATTGTATGGGTCCACTTGGAGACATCAGGGGACCCTATAAAATGTCAATGCTCAAGCAATAGAATGAATTAGCTGCTCCATTTGCTAACAAGTTCAAAGTTTGGAAGATAGGGCAGTGTGAAAACGACAGACTCCCGTTGCCAGATGCTTGTCACTTAGTATCCACAAGTAAGTAATTGTATCTTCCCAATATGTACAGAGAAAGTAGATAATTGTTCTTGCTGGCTTAACTACTTGATGCAAGTTTTTGCTCTAACTCTAATTTGTTGACCATTCAAAATCCAGAACATTACAACGTAGGTAAGAAGAAGTCGCCATTCCTTTAAATACCTAATTTATCTAATGAGCTTACTACTCACATAAGGTTATTTTGGATTCGCCTATTTTTTCCGAGATTGTGACTTGTGTGTTCCTTTAGTTACTTTCCTGCGATCAAATCATGTAAAATCTCTTCAATCAAGTGAAAACAGGTCTAGAGATCCCAAATGAAGTCTCTCTAGTGGCTTTGAGGACGCCTTCCACCATATACATGAGATTTCTCAAAAGCGAAGGGGCATATCTGTACATGTTGGCATATATGTACTTGTTGGCATATCTGTACCTGTTAGCATATCTGTACCTGTTGGCATAGTTGTACCTGTTGGCATACCAGCCTATTACTACTCTTTTACACAAGGAGTATCTGTTGGAAGACGTGTTTTCTTTCTTTCTTCAAGTAGAAGCAGTTAGCATTTGCCTGCTTTCTTTCTTTCTTCAAGCAGAAGTAGTTAGCATTATCCTGATTTCTTTCTTTCTTCAAGTAGTTAGCACTAGCTTGCTTTCTCTCTTTCTTCAAGCACAAGCAGTTTGCACTAGCCCTTCTTTTAGAAGTAGCAGCAATTGGCAGAATATGGAGTACATGTATCAAATAGTTTTACCCGGATTACAAAGTATTAGTAATATGGAAGAGGTACGTGTATGTGTATTTATGTTATTATAGATTTATCTCATTTTTTACTAAATATGCGCTAGGTTTTATCCAAACTTTACTAATTAATACATAATTTTGTTGAAGTACAGATATTTTCTCCAAATCCGTACACTCAAGAGGAGATCGACGATGTTCGAGAAAAACGGCGTAGATATTTTATTAGTAGTTGTTTGTAGTCATTTTCTATTTTTTAGAGATAGATATTAAACTATAATAAATTGTAGGTTATTTTTTGGGATACAATTTTTTGTACTTGTTGAACCAACTTTCTTGTTTGAATTAATACAATTTTGTTTTTGCAATTCTGCAA ATGGAGTGTGCCTCAGGTTATGTGGTTTGGGTGGGTTACTGTTGCTTTAGGGGAATCTGGGGTTGGGCAGAACTAGCATTGACGCAACACATAAAGTTGCTAGCAGATGATGAGTTTTTGAGCAAATATAAAATGTACTGCCAACAAATGCAATCAGTTGTTACATCATTTGAATCTGTCGCGGGCCTTGGAAATGCTGCCCCATTTTTATGCTTTGCTCTTAGAGCCATGTTTAGGCATTTCCAGTGCTTAAAGAATGCCATTCTAGATCAAATTCGCGTTACTAAAAGTAAACAGGAGAATCGCATTGTGTCACCTGCCAAAGGAGAAGAGTTACATTCTGAAACAGCTCAAACTGAAGATGATCGTGATATACAAAAGGAAAATCAAGGATCGGATAACTTTGAATATCAATATGATGTGAAACTAAAAACTTGGATGCAGACCACTGATTTAGGCAATAATCACGAAGGGAGAAGTAGAAAATCGAATGAATTAGCTGCTCCATTTGCTAACAAGTTCAAAGTTTGGAAGATAGGGCAGTGTGAAAACGACAGACTCCCGTTGCCAGATGCTTGTCACTTAGTATCCACAATTAGCACTAGCTTGCTTTCTCTCTTTCTTCAAGCACAAGCAGTTTGCACTAGCCCTTCTTTTAGAAGTAGCAGCAATTGGCAGAATATGGAGTACATGTATCAAATAGTTTTACCCGGATTACAAAGTATTAGTAATATGGAAGAGATATTTTCTCCAAATCCGTACACTCAAGAGGAGATCGACGATGTTCGAGAAAAACGGCGTAGATATTTTATTAGTAGTTGTTTGTAGTCATTTTCTATTTTTTAGAGATAGATATTAAACTATAATAAATTGTAGGTTATTTTTTGGGATACAATTTTTTGTACTTGTTGAACCAACTTTCTTGTTTGAATTAATACAATTTTGTTTTTGCAATTCTGCAA ATGGAGTGTGCCTCAGGTTATGTGGTTTGGGTGGGTTACTGTTGCTTTAGGGGAATCTGGGGTTGGGCAGAACTAGCATTGACGCAACACATAAAGTTGCTAGCAGATGATGAGTTTTTGAGCAAATATAAAATGTACTGCCAACAAATGCAATCAGTTGTTACATCATTTGAATCTGTCGCGGGCCTTGGAAATGCTGCCCCATTTTTATGCTTTGCTCTTAGAGCCATGTTTAGGCATTTCCAGTGCTTAAAGAATGCCATTCTAGATCAAATTCGCGTTACTAAAAGTAAACAGGAGAATCGCATTGTGTCACCTGCCAAAGGAGAAGAGTTACATTCTGAAACAGCTCAAACTGAAGATGATCGTGATATACAAAAGGAAAATCAAGGATCGGATAACTTTGAATATCAATATGATGTGAAACTAAAAACTTGGATGCAGACCACTGATTTAGGCAATAATCACGAAGGGAGAAGTAGAAAATCGAATGAATTAGCTGCTCCATTTGCTAACAAGTTCAAAGTTTGGAAGATAGGGCAGTGTGAAAACGACAGACTCCCGTTGCCAGATGCTTGTCACTTAGTATCCACAATTAGCACTAGCTTGCTTTCTCTCTTTCTTCAAGCACAAGCAGTTTGCACTAGCCCTTCTTTTAGAAGTAGCAGCAATTGGCAGAATATGGAGTACATGTATCAAATAGTTTTACCCGGATTACAAAGTATTAGTAATATGGAAGAGATATTTTCTCCAAATCCGTACACTCAAGAGGAGATCGACGATGTTCGAGAAAAACGGCGTAGATATTTTATTAGTAGTTGTTTGTAG MECASGYVVWVGYCCFRGIWGWAELALTQHIKLLADDEFLSKYKMYCQQMQSVVTSFESVAGLGNAAPFLCFALRAMFRHFQCLKNAILDQIRVTKSKQENRIVSPAKGEELHSETAQTEDDRDIQKENQGSDNFEYQYDVKLKTWMQTTDLGNNHEGRSRKSNELAAPFANKFKVWKIGQCENDRLPLPDACHLVSTISTSLLSLFLQAQAVCTSPSFRSSSNWQNMEYMYQIVLPGLQSISNMEEIFSPNPYTQEEIDDVREKRRRYFISSCL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20209.1 vs. NCBI nr
Match: gi|902233968|gb|KNA23276.1| (hypothetical protein SOVF_026430 [Spinacia oleracea]) HSP 1 Score: 135.2 bits (339), Expect = 1.700e-28 Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 1
BLAST of Spo20209.1 vs. NCBI nr
Match: gi|902150993|gb|KNA05474.1| (hypothetical protein SOVF_190000, partial [Spinacia oleracea]) HSP 1 Score: 135.2 bits (339), Expect = 1.700e-28 Identity = 69/76 (90.79%), Postives = 70/76 (92.11%), Query Frame = 1
BLAST of Spo20209.1 vs. NCBI nr
Match: gi|902233884|gb|KNA23237.1| (hypothetical protein SOVF_025930, partial [Spinacia oleracea]) HSP 1 Score: 108.6 bits (270), Expect = 1.700e-20 Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 1
BLAST of Spo20209.1 vs. NCBI nr
Match: gi|902212084|gb|KNA16868.1| (hypothetical protein SOVF_085250 [Spinacia oleracea]) HSP 1 Score: 108.6 bits (270), Expect = 1.700e-20 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 1
BLAST of Spo20209.1 vs. NCBI nr
Match: gi|731353152|ref|XP_010687910.1| (PREDICTED: BEL1-like homeodomain protein 9 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 102.8 bits (255), Expect = 9.600e-19 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1
BLAST of Spo20209.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUR7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026430 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.200e-28 Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 1
BLAST of Spo20209.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDX8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_190000 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.200e-28 Identity = 69/76 (90.79%), Postives = 70/76 (92.11%), Query Frame = 1
BLAST of Spo20209.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWL9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_025930 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.200e-20 Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 1
BLAST of Spo20209.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_085250 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.200e-20 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 1
BLAST of Spo20209.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EIF0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g193660 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.700e-19 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1
BLAST of Spo20209.1 vs. ExPASy Swiss-Prot
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.700e-12 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 1
BLAST of Spo20209.1 vs. ExPASy Swiss-Prot
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.800e-9 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1
BLAST of Spo20209.1 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=1 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 1.500e-8 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 1
BLAST of Spo20209.1 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=3) HSP 1 Score: 60.1 bits (144), Expect = 4.500e-8 Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 1
BLAST of Spo20209.1 vs. ExPASy Swiss-Prot
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana GN=BLH10 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.800e-8 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1
BLAST of Spo20209.1 vs. TAIR (Arabidopsis)
Match: AT5G02030.1 (POX (plant homeobox) family protein) HSP 1 Score: 72.4 bits (176), Expect = 4.900e-13 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 1
BLAST of Spo20209.1 vs. TAIR (Arabidopsis)
Match: AT1G75410.1 (BEL1-like homeodomain 3) HSP 1 Score: 64.7 bits (156), Expect = 1.000e-10 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1
BLAST of Spo20209.1 vs. TAIR (Arabidopsis)
Match: AT2G23760.1 (BEL1-like homeodomain 4) HSP 1 Score: 61.6 bits (148), Expect = 8.600e-10 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 1
BLAST of Spo20209.1 vs. TAIR (Arabidopsis)
Match: AT4G36870.1 (BEL1-like homeodomain 2) HSP 1 Score: 60.1 bits (144), Expect = 2.500e-9 Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 1
BLAST of Spo20209.1 vs. TAIR (Arabidopsis)
Match: AT1G19700.1 (BEL1-like homeodomain 10) HSP 1 Score: 59.7 bits (143), Expect = 3.300e-9 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20209.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20209.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20209.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo20209.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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