Spo20186 (gene)

Overview
NameSpo20186
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 23812780 .. 23815420 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATTGGCCTCCCAAAAGCTATGATTGCTTCTTCTGTCATGACAGGAGCTCTTGGTGGTTCTCAGACTGGTCAGGTAAATCAAAACAGTTTGCAAAATCGGTCAATTATTGGTAATGACCCTTTAACGCATCATCTAGCCAACATGTCTAGGAGTCAACTGAATCAAGTTATACATGAAATGAAGGTAAATACTGCAAAAGAGATGTTCACAGGAATTATTTTACATGTGAATGTATTTCCTGTCAATCTGGTTCCATATGCTTTCTATGCAAAACAAGGACCTTATGTCAACTTTTTCTTGTGAGCCCACAGCTTTTAAAAGCTCTCTTCCGGGTTCTCTTCAACTCCGAGCTGCTTCCATTTATTTGTAAAATTACTTAAGTTTGTCCTTAATTTCTCTTTGGGTGTAGCAACAAATTTAACCTCCAGGCTTCAGTTTATGGTAGTGACCTTACGTGAATAGAAGCAAGGAAATTGGAGGGGGGGATGATATCCTCTGTATATATAGAAGCAGAAATATCATTGTTGATCAAGCTTTTGATGGTTAATTTACTATGATTATGATATAGTTTGGTCGCAAAAGCAGAAATATCATTGTTGATCAAGGTTGAATATGTCTATGATTGGGAATTTGTGATCGTCTTGACTCTCAGCTCTACCAGTGTTACCCATAGAGCGGTGTTGTGGGGACCTATTATGCAAGTTGGCATGTTCTGTGGTTCATGCAGTAGATAATGTGATATGCTTTTGGTTTTTGGTATACGGTATTTTACAGTTCATACCATTATAAGTTCTTATGTTAATATTAATTTTTTATATTTTATATATTTTTTATATGATATATGATATATGTTAATAGTAGTACCTAGGAATCATCTGGAAAAATTGATTTACTTTTTTATTTTATTTTTGTGATCAATCTGATCATGTGTTAATCTCACGTACTTAAAATCTTCTTATTGTGTTTGTATTCTATATGAAGTTGGTGTTTTCGAAAGACTAAAAGTTCGTATTTTCTTTTGTGAGGTGTGATTTAAGGATGCAACGACATCTTTCCGACTCTTACTGCATACCGTGCTCCAGTTTTTCAAATACGCTTGTCTGCGTAATCATCTTCTTGTCGTCTTAGCTATCATGAATCTGCAGCTTCAGTAGACCTTCATACTTTAGTGTAATCACTTATGACCAAGCTCTGATGGTGCAGACCCAAGTGATGCAGACAAAGTGGTGCAGACCCAAGTGATGCAGACCCACGTGATGCAAATCCAAAGTGGTGCAGACCCAAGTGATGCAGATCCAAAGTGGTGCAGACCCAAGTGATGCAAACCTTCGTGAAAATTCATGTGGTGTAGACCCAAGTGATGCAAATAAAGTGGTGAGGACACAAGGTGGTGCAGATCCAAAGTGATTTGTTAGTCTTCCTTTATTATGGACCTGAGTGAGATATTCATCTAGTTTTTCATGCAAGCATGGCATCTTTTGTTTTCTCCTTTGTCATCCTCTTTAGAATTAAATATTTTTATTGATTAAATATGACGATTTTGAATTATTGAAAGTAATGTTAGTTTATTTTCTTAAATTTTAGGTGGTAAACTGAGTTTTAGGGAGCTAATTGATGATGATGATGATATTTTTGGGTCGGAAAAGGTACATCTACTTGTTTGTGATACTAAACTATATTGATTTTTGGAGAATTTTTTAATAGAATCCAATTGGTGTTAGGGTGACTGAATTTACATGTATTGCAACAATTATGTTCCCTAATTTTGTTTTAATAGGATATGATTAGGTTTTGATTGAATATGCTGTGTTGTGGATGTTGGTGTCTATTGCTACTCTTTTGTATTGGTAATTATGTTGTTGTTTTATTGCTCTAGTTTCTGTTTTGTTCTACTAAAATTTGTTAGTTAGTGATGAAGTTCATTTTGGCGGTGGGTTAATCAATTCCTTTTTCCGCTACAAATTTTCTACTTGATTAATTAATGTCTGCATGTGAATGAAGTTAAAGTGGTTCACTTTTTTTTATTTTTGGAGCTTCTGGTAATTAATTAATTGAGGCAGTGTGCATCTGCCAAAGTATTTTTTGCGTTGTTGCAAATTATTTGACGTGGCCTCTACAGGCTCTGATGGTGTAGACCCAAGTGATGCAAACAAAGTGGTTCAGACCCACCAAGTGATGCAGATCCAAAGCGGTGCATACCCAAGTGATGTTGATCCAAATTGGTTAAACCGAATACATAAGCTGGATTATGAATCCCCATAATCTATTATCCGGTTATGACTCGCTCATATGATTGACCGTGCCCCAACAGGATAATCTATTATACCTTGAGAGATCTATTTGAGTTAAAGACAATAATAAGTGAATAACAATTCAAAGAATGGTGAGGTTAAGGTATGTTTTTCTTCTTATTGAGGATCGTAGTTTCTAGGATTCTTTACTCAAAAATATAATTAGGGATTTATGAATTTACTTAAATTTGACAGGAAGCAGATGAAGCTGATGATAATACCTATTATCTAAATTTCTGTAAGGTTTGGAGTTTGTCTGATTTGCTTAATTGGTATAGAATTCATAGGTTTATTGTTTTGTTTTGTAGGTTTCTATGTGTTTTCTCAACTGGGATGTTGATTAG

mRNA sequence

ATGCCAATTGGCCTCCCAAAAGCTATGATTGCTTCTTCTGTCATGACAGGAGCTCTTGGTGGTTCTCAGACTGGTCAGACCCAAGTGATGCAGATCCAAAGTGGTGCAGACCCAAGTGATGCAAACCTTCGTGAAAATTCATGTGGTGTAGACCCAAGTGATGCAAATAAAGTGGTGAGGACACAAGGTGGTAAACTGAGTTTTAGGGAGCTAATTGATGATGATGATGATATTTTTGGGTCGGAAAAGGAAGCAGATGAAGCTGATGATAATACCTATTATCTAAATTTCTGTAAGGTTTCTATGTGTTTTCTCAACTGGGATGTTGATTAG

Coding sequence (CDS)

ATGCCAATTGGCCTCCCAAAAGCTATGATTGCTTCTTCTGTCATGACAGGAGCTCTTGGTGGTTCTCAGACTGGTCAGACCCAAGTGATGCAGATCCAAAGTGGTGCAGACCCAAGTGATGCAAACCTTCGTGAAAATTCATGTGGTGTAGACCCAAGTGATGCAAATAAAGTGGTGAGGACACAAGGTGGTAAACTGAGTTTTAGGGAGCTAATTGATGATGATGATGATATTTTTGGGTCGGAAAAGGAAGCAGATGAAGCTGATGATAATACCTATTATCTAAATTTCTGTAAGGTTTCTATGTGTTTTCTCAACTGGGATGTTGATTAG

Protein sequence

MPIGLPKAMIASSVMTGALGGSQTGQTQVMQIQSGADPSDANLRENSCGVDPSDANKVVRTQGGKLSFRELIDDDDDIFGSEKEADEADDNTYYLNFCKVSMCFLNWDVD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20186.1Spo20186.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo20186.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20186.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20186.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20186.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006996 organelle organization
biological_process GO:0043933 protein-containing complex subunit organization
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo038780.68Barchart | Table
Spo213940.68Barchart | Table
Spo166790.67Barchart | Table
Spo258080.67Barchart | Table
Spo216290.66Barchart | Table
Spo218590.65Barchart | Table