Spo20133 (gene)

Overview
NameSpo20133
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSplicing factor SF2-like protein
LocationSpoScf_02312 : 53159 .. 60313 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCTTTTTCAGGTAGTCCACCTGCTGTTTTCTTTTCTAATAAAAAAAAAAAACAAACGCTCTCACTAATGAGATCTCGACAAAATGGTTAAAAGTCTCAGCTTCAAAACCCCTCCACAAAAGCCGCTCTCAAGATGGTGGCGCGTGGATGAAAGCTTTAAGATCCCCAAAGATCAAACGTATGGTACACAATAAAAGCGTAGAGCAGTGAAGCACCGAACCAAGTCTCTACATTTTTGTCACATACTCCGTATTAATATAACCCTACTTTCTCTCTCCTCTCGAAACTACTTTCCAGAGACTTCCAATTTCTAATTTTTCACGGTACGCTCTACACGTCTTCTTCTCGTTTTTCCTGTTTTTCAATCTCCTCATTCTTTCGTGCTCAAAACTATAATTTCAACTTCGATATATTTTTTTTCCGATTATTTTTTTAAAAATTGATTAGTGATTCAGTTAACTCTTTCATCGTACTAGTAGTTTAGTTCGGTAATTTCTCTTCTGATTTATTGTCGGATGTTTGATTAACAATATTTGTAATTTGATTCCTCTGTTTCTTATCTTGGTTGCAGAAAAGTTAGGTTTTTTTTAATATCGTTGATTAGAATTAATCGGATTCTATGTCATATTTTGATTTGATTTTGTGATTTGTTTCTTGTACCTTGATTTCTATTTGATATATCATAATTTTCAATTTTTGGTGGTTAATTTTAATTTTTCAATTTTATTTGTTTATTGTAATTGGCTGAATTATGCAAATTTTTTATGTTTGAATTGATCTTTCTGAATGTGGATTGCCCAATTTATTACCCTTAAACCTAATAACATTAATTAGAATTACTGAGAACTAGTTTTCGACAAGAGCTTAGCTCCGAATATTGATACAAATGTATTCTTGGTTTTATTTTTGTTGGATTAACTTCCAGTTTTCGAATTTAAAATCGTAATAGGTAATTCGATTTTCGAACAATTAGTTTATTAAAAAATAAATTCTTTGAAGTTCTTTTAAATTTTGGTTTAAAGGATTTATTTCCCCGAAATGTAGTTTTTGTGGGAAAAAATTTCTCAGGATTCTGTCAAGTGTTCATTGCGGTTATAACATTAGTAGTATGTGTATAGAGGACTAGTGTTTTTTTTTCCTTCTTCCATGTCCCCTCTTGGAACTTTGCAATAGTTGACTGTATTTTTGTTGTGCAGCTTTTCTCAAGGTTGAAGACAGCTATGACGAAACGCATTTATCGTACTATTTATGTTGGAAATCTTCCCGGTGATATTCGGGAGAGAGAGGTGGAGGATATTTTTTACAAGGTTGGTCTTTATAATGTATTATGTGGTTCCTTTGTGGCGATTCCAGCCCGAACTGACAATGTAGTATTTTGTATGAGTGTTGGTCAATTTTGTTATGTGAATTGCTCTAGGTTTTGATAATGGTACCTGAAATGAAATATAATCTCTTACAAATTGAGAACTTCTTGCCCTTCATGTTAGACTTGAATACTTTATGATTTAGTTTCTTTGAGCTTGAGGATTGGGGATATGTATGACTTTATATACATGTGAAGTCCGTAGAAAAAAAAAAAATCCGTGCAGTAGGTTCATAATGCTTTGAGTACAATTTCAATAAGGAATGGCTGAATGATGATCCTACCTTTGCCAAAATAAAATAGAGAAGATTTGGGACCTTGCATCTCAATCAAGAAATTTTCAACATGAGAGACAAATTTATAGACTTATAGTGTGTACGCGGGTGTTTTTTTGGGTAGGTAGGGTTTGTTTGTGTTGGAGGGGGGGGGGGGAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGAATTACCTGTGTTAAGTTATTGTTCTTAGCATTAAAACATACCTGTTAGTGGCAGACCACCTCAGTATATAGAGTCTAGTTTGTGGTTCTTTATCAGACCTTCAATGATATAACTATTTTCTGGTAGCTGAGTAAAATAAGCTTCATCAGTGCCGCTAATTCTTTATGCTCTGATGCAGTATGGCCCAATCGTTGAAATTGATTTGAAGGTTCCGCCAAGGCCTCCAGGTTATGCTTTTGTTGAGGTGAGGACAATTATGAAAAGAAGATAAACATCTAGGATTAGATTGATGAATTGTTTGTGTAACTCATAGCTTCTTTCTCTAATTTGTTGGATTGTTATTGTTTATTTTTAACCATATTTTACAGTTTGAAGATGAACGAGATGCTGAAGATGCTGTGCATGGCCGAAATGGTTATGATTTTGATGGGCATCGTCTACGGGTAGGTATTCTTGGAACCTTGTTTCTGCTGCCTGTCTACATGTGCTTCTTTTTCTGGCTGATGAGACTTGCATCACTTACATTGGTGTTTTAAACTTCAGGTGGAATTCGCTCATGGTGGACGAGGTTCATCATCATCAGACCATCGCAGCAGTTACAGTGGTAGTAGTTATAGAGGGGGAGCACCCAAGCACACTGACTACAGAGGTTAGTCTTGCTTTGCTAGTGACATCTTTTTGGTTATTTCACAGCTATGCAAAATTCTTATATTGGTGTTTCTGCAGTTATGGTCACTGGACTGCCATCATCTGCTTCTTGGCAAGACCTGAAGGTCAGTGTTAACAGTCTTTTTAAACTAGAGGGAATTTGGGGATCATTGTGCTGTGCAGTTTGTGTCTCGCATGAGTTCGATGTTCCCATTCCCATTATATTTTTTCTATCTATTATTCATGTTGTTTTATTGATTTGTGTATTGTATCATAATCAGGATCACATGCGACGAGCTGGAGAAGTTTGTTTTTCAGATGTATTCAAGGATCGTCGTTATGGTGGTAAGTTGGCGCTTATGATGATCCTTGAGTTTCTTCTTACCTAGTGTTTCTTTCATTAGTGGCAGTGATTGATTGTTCAATATGTGGTTTGGCTATGTGTGTGATTTTTATTAATTTTTTCATATTGTTCTGTAAGTCTAGGTAGCAACTGTAAAGTTAAATCGACTTAAAAACTCTTTAGCATTTTGTGTTAGGTTTTGACATTTTCCTAGTATTATCTGGAATGCATCACGGTACTCAAGTTCCACAATGATAACTGCCTTTACTGGGTATATCCATCTTTCTACCCGTCCGATAAAGTCCCATAGTCCTTATGCAAGCTAGCATGTGACAGATGCTGACGACCATGCATATTGGAGATGAGCTAACTATCTTGCGGCATTAAGTTGATTCAAGCCTAAGTCTTGAAATTTGGACCAGAAAATCTGAAAGTTCACATTTTTTTTGAACTTATGTTGGTTGTCTAATATGTGGTGTAGGCCTTTAGGGTCATCCTCAAAAGTTGAGATGTTTTGTTCACTGCATACTTCTAGTTGTACAGTTGTGCCTTTTGACCTGATAAAGCGTTCTTTTTGCAGGCATGGCTGGAGTTGTCGAATATGCAAGTTATGATGATATGAAACGTGCTGTAAGATGTTTTGTTCTGTTTGTTGTTTAGTGGTAATTTTGTTTAGTGCCTTTTTTCCTTGTAGATTATGAGGCGTTCCCTTTTATGCAGGTCAGGAAGCTGGATGATTCTGAATTTCGTAATGCATTCTCTCGCGCTTATATCCGAGTACGTCTCAAAAAAAATTGATTCTCAAATTGAGCATTTACTGTTTTCTTATAGTTTTTCACATTAATTTTACATCTCCAGGTGAAGGAGGACTCGAGGAGTCTGAGTCCAGATGATAGGTCGAGAAGCAGAAGCAGAAGCTACAGCCGTGGCCGTAGTTATAGTCGAAGCCGCAGCCGCAGCCGCAGCCACAGGTGCTGTTATTTGTTTTAAGATGGATTTTGTGCTAAGGTTTTATGATAATGAAACTATGCTGAAAAGTCTCCTTTGATGCAGTATATCTCCGCGAAGAAACTCACGCCGTTCTTATTCTAGATCTCCTTCGAAGTCCCGCTCGAGATCTCCCTCTCGTTCTCGCTCTAGGTATGCTGTTGCTCCTGTTACTCTTGCTCATCAATCACCTTAAGGAAGTATAATGACTAATCATATATGGTTAACAAGATTGCATAATATTGCGTCATATATCTGGTTCATTTCCGTAAACTGCTTAGCTTATACCAACATCTGGTTATAGTTCATCAACGAAGCTAGGTTGTATATGTCTAGCTTCTATTGGCCATCCAGATTCATGTGGCTGCATTATTATGTATTTACGAAGTATCCCTGATTTAACCTCGGTTGAAGGATACATATGTTGTATGATTTAGCTTCTAGTGATGAGCCAGACGTACCAGTCATTTTACACTAATTGCCCCTGATTTGACCTTGGTTAAACATGTAATGTAATTTATTTTTTCCTGATATGCGGAGTAAGATCGTCCTATTATTTCCGGGAGTACAACAGCCGATTAACAGGAATACAGTAGGCCTTCTTACTTGTTTCTGTGTGAAAGATGTTAAGAGGGTATAATACCAGACAGCCAGTTACAGACTTACAGATAATGGAATAAACTAGACTGGAGCAGCAATTAAACCGTATGCACCTGTATATTAAAAGTGTTGGTCGTATTTTTTGGTCTTGGGTGCTGCAAGAGTGGATCGTCGAGAATACGTGGATCTTTTTACGAAGCCTTAGAGGAAGGGAGAAGTCAGAAAACCATTATTTAGCAATTCTTGCTAGATTGTTCCTATTTTTTGAAACCTCTTCCGAGGCTTCCCTCTTCATTTTGTCTATTTATGCTCACATTTTGTCCGACTTTATTTGGTAAATTTCCCTGTTCACATTTTTCTTCAAGCAACTGCATAATGGGTGCTTCTGGAGTGGAATATGGAAGATTATGTAGATTAGTTTTAAAGACTATAGAAGAATGATCGACCATTTTTATTGCCTTTTTTTTATCACTTGACTTCTGCATGGAATCAGTTTGCTTCCTCTTGTCTTTCCCCTTCTCGGATTATCTTCGTCCATTTTCAAAGCATGCCTGTTAGATGCGTTTATTTGCAGTTGGGTGGCTCTGTTGTAGTTTGGAGTCTGGTAGTTAAAGCGTTGACCTGTTAATGTTACCAATGGTTGCATTTCTTCTGTCAATAAGTAGAAAAGGCATAGGGAAGTGCCAAGTTACTTTTTGATGTCTTAACTTATTTTGTAGTGTAATACTATAATTGGTGAGAAAAGAGGGGTTATTGGAGACATGAAGGTAGTTCATTTGTATATGCCATACCAAACTATAAGCTGTGTCTGACACTTGGATGCATAGAGAGGGAGGAGGTTAGATGCTTAAAAACTTCATATTTGGGCAAAAATTAGGTAAAATTTAGACATTTCATATAAGATGCGTATCTGTCTCTGACACTTCTAGCTGCATTCGAGTAACATAGACGTGGCATGCATGTGCTACCGTATCTAATCACATTGTGCTTTCCCACTTCAGATCTGTTGAATTTGGAACTTAATTAAAAACAAAAACTTAGCCTCTTAATTCACGTTAGTTAGTGCAGAGTTCCCAAAATAAAAGCGTGTATTTCTAGGGATAAGTTGTAACTTGTAAGTGATCATATGGGGAAATCAGATAAATTTTCCCATATTAGATATATCAGGAATTAACCATGCCTTTTGATGGTTTTTGAGACACGATCGATCATATTTGAAACAGATGAGTGTTGCCAAATTGTTTTAACATGTTTATGAAGGCTGTCTTCTTTGTTTCTTTAATCCAGCTCTTTGCGGCAGTCTGGGGATTGGACAAAGGGGGCTTGGATCTCTTTGCACGTCAAACATGCTCATTTCCATCCAAGGTGGACAAATTTTAGTAAATATAACAAGACCCAGGCTGGTATTTTGTTATTTTTTGGACATGTTTAATATTGGGAAGCATGTCTGGATATGTGTTTAAGGTATAATATTTGGCGGAGGTTCTTGGGTGTTAGCTGACGGAATCTTTGGTTCAATAAGAAAGAGCCGGATTCTTCTCGTAACTCATAAGTGCTCTAGTGTCTTGGAACACAAAGCATATCATAGCCAAATTGCAAACTTAAAGGATATTGGTAGATACATTGTTCAGTGCATTTTAAGTGCGAAACTTGGTTTTGGGACTTGTTGCTTCTCTCGTTGGTGAACATGAGATTCCACTACGAGCTGACTTGATGGTAAGGTTGGGATTTCTTGCTCTGGTCCAAAATAGCTCTCCCCTCACTCCCCCTTCTGGTGTTTTCACTTATAATTTTGAGTGTGAAGGTCCAAAATCATCCTGTTGAATGCTTGTCAGAATGAATCATCATGACTATTTGGTAGAGCAGTCAATCCCTCAACACTGACTTTGGATTGTTTTGCTCTATTTTGTTTACAGATCCTTATCAAGATCCAGGTCCCCAGTTCGTCGCAGAGTTAGCAGGAGTGCTAGTCGATCACTTTCACCAGCTGTATGATACTTTTGTTGATGTTCCATATTAGTCTCTACTTGTGTTGTTTGTGTTTTTTAGTTCACTGAACAAACAATATGTTATGTGTATTGCAGGCTCGATCTGATAGGAGTCAATCTGTGAAGTCTGAGGAGCGTTGCTGAGTGAAGGAGATTATTGCCGGACAAACTAGTGGATGTCGTGTTACATTAAGTGTTATGTGGTAGGCGTATAATTGACGTAGATTTTCTCAGTTTAAGCTGATAATTCGGACCTCTGATTAGATATTGGTGTATTTATAATGCTGGCCGATTGTCCTTGATAATTTTCATAAATTTGTCTTTTGAGGACTAGAGTGAAAGCGGGTTCACGTATGAACTCAAAGTAGCGAATCTTTCATAGCTGCGCTGTGTAATTTGGGATCTGAATTTTATTGTTTTAGGGTTCTAGACTTCTAGTGTAATGTGACAATGAACTTTGAGGTTTAGCTTTCCTAGTAAAGAGCTCATAAGTGATATTCTCCGTAGTATGATTCATAGTATCTGAAATTATGCGTGGTTTTCAATTTTGAATAATGTTTTTTTTTTGTGCATTTTAGCTTTTAGA

mRNA sequence

ATGATGCTTTTTCAGTTTAGTTCGCTTTTCTCAAGGTTGAAGACAGCTATGACGAAACGCATTTATCGTACTATTTATGTTGGAAATCTTCCCGGTGATATTCGGGAGAGAGAGGTGGAGGATATTTTTTACAAGTATGGCCCAATCGTTGAAATTGATTTGAAGGTTCCGCCAAGGCCTCCAGGTTATGCTTTTGTTGAGTTTGAAGATGAACGAGATGCTGAAGATGCTGTGCATGGCCGAAATGGTTATGATTTTGATGGGCATCGTCTACGGGTGGAATTCGCTCATGGTGGACGAGGTTCATCATCATCAGACCATCGCAGCAGTTACAGTGGTAGTAGTTATAGAGGGGGAGCACCCAAGCACACTGACTACAGAGTTATGGTCACTGGACTGCCATCATCTGCTTCTTGGCAAGACCTGAAGGATCACATGCGACGAGCTGGAGAAGTTTGTTTTTCAGATGTATTCAAGGATCGTCGTTATGGTGGCATGGCTGGAGTTGTCGAATATGCAAGTTATGATGATATGAAACGTGCTGTCAGGAAGCTGGATGATTCTGAATTTCGTAATGCATTCTCTCGCGCTTATATCCGAGTGAAGGAGGACTCGAGGAGTCTGAGTCCAGATGATAGGTCGAGAAGCAGAAGCAGAAGCTACAGCCGTGGCCGTAGTTATAGTCGAAGCCGCAGCCGCAGCCGCAGCCACAGTATATCTCCGCGAAGAAACTCACGCCGTTCTTATTCTAGATCTCCTTCGAAGTCCCGCTCGAGATCTCCCTCTCGTTCTCGCTCTAGATCCTTATCAAGATCCAGGTCCCCAGTTCGTCGCAGAGTTAGCAGGAGTGCTAGTCGATCACTTTCACCAGCTGCTCGATCTGATAGGAGTCAATCTGTGAAGTCTGAGGAGCGTTGCTGAGTGAAGGAGATTATTGCCGGACAAACTAGTGGATGTCGTGTTACATTAAGTGTTATGTGGTAGGCGTATAATTGACGTAGATTTTCTCAGTTTAAGCTGATAATTCGGACCTCTGATTAGATATTGGTGTATTTATAATGCTGGCCGATTGTCCTTGATAATTTTCATAAATTTGTCTTTTGAGGACTAGAGTGAAAGCGGGTTCACGTATGAACTCAAAGTAGCGAATCTTTCATAGCTGCGCTGTGTAATTTGGGATCTGAATTTTATTGTTTTAGGGTTCTAGACTTCTAGTGTAATGTGACAATGAACTTTGAGGTTTAGCTTTCCTAGTAAAGAGCTCATAAGTGATATTCTCCGTAGTATGATTCATAGTATCTGAAATTATGCGTGGTTTTCAATTTTGAATAATGTTTTTTTTTTGTGCATTTTAGCTTTTAGA

Coding sequence (CDS)

ATGATGCTTTTTCAGTTTAGTTCGCTTTTCTCAAGGTTGAAGACAGCTATGACGAAACGCATTTATCGTACTATTTATGTTGGAAATCTTCCCGGTGATATTCGGGAGAGAGAGGTGGAGGATATTTTTTACAAGTATGGCCCAATCGTTGAAATTGATTTGAAGGTTCCGCCAAGGCCTCCAGGTTATGCTTTTGTTGAGTTTGAAGATGAACGAGATGCTGAAGATGCTGTGCATGGCCGAAATGGTTATGATTTTGATGGGCATCGTCTACGGGTGGAATTCGCTCATGGTGGACGAGGTTCATCATCATCAGACCATCGCAGCAGTTACAGTGGTAGTAGTTATAGAGGGGGAGCACCCAAGCACACTGACTACAGAGTTATGGTCACTGGACTGCCATCATCTGCTTCTTGGCAAGACCTGAAGGATCACATGCGACGAGCTGGAGAAGTTTGTTTTTCAGATGTATTCAAGGATCGTCGTTATGGTGGCATGGCTGGAGTTGTCGAATATGCAAGTTATGATGATATGAAACGTGCTGTCAGGAAGCTGGATGATTCTGAATTTCGTAATGCATTCTCTCGCGCTTATATCCGAGTGAAGGAGGACTCGAGGAGTCTGAGTCCAGATGATAGGTCGAGAAGCAGAAGCAGAAGCTACAGCCGTGGCCGTAGTTATAGTCGAAGCCGCAGCCGCAGCCGCAGCCACAGTATATCTCCGCGAAGAAACTCACGCCGTTCTTATTCTAGATCTCCTTCGAAGTCCCGCTCGAGATCTCCCTCTCGTTCTCGCTCTAGATCCTTATCAAGATCCAGGTCCCCAGTTCGTCGCAGAGTTAGCAGGAGTGCTAGTCGATCACTTTCACCAGCTGCTCGATCTGATAGGAGTCAATCTGTGAAGTCTGAGGAGCGTTGCTGA

Protein sequence

MMLFQFSSLFSRLKTAMTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAEDAVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSRAYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSLSPAARSDRSQSVKSEERC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20133.1Spo20133.1mRNA


Homology
[Close]
BLAST of Spo20133.1 vs. NCBI nr
Match: gi|902206684|gb|KNA15537.1| (hypothetical protein SOVF_097130 isoform B [Spinacia oleracea])

HSP 1 Score: 505.0 bits (1299), Expect = 9.300e-140
Identity = 284/318 (89.31%), Postives = 285/318 (89.62%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSL 307
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRSRSLSRSRSPVRRRVSRSASRSL
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSRSLSRSRSPVRRRVSRSASRSL 300
[Close]
BLAST of Spo20133.1 vs. NCBI nr
Match: gi|731326518|ref|XP_010674059.1| (PREDICTED: serine/arginine-rich splicing factor SR30 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 448.0 bits (1151), Expect = 1.400e-122
Identity = 252/291 (86.60%), Postives = 266/291 (91.41%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MT+RIYRTIYVGNLPGDIREREVEDIFYKYGPIV+IDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTRRIYRTIYVGNLPGDIREREVEDIFYKYGPIVDIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGR  SSSD  SSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRAYSSSDRHSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGM+GVV+YA+Y+DMKRA+RKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMSGVVDYANYEDMKRAIRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKS 256
           A+IRVKE SRS SPDDRSRSRS  YSRGRSYSRSRS    +SISPRRNSRRSYSRS ++S
Sbjct: 181 AFIRVKEYSRSPSPDDRSRSRS--YSRGRSYSRSRS----YSISPRRNSRRSYSRSLTRS 240

Query: 257 RSRSPSRSRSRSLSRS--RSPVRRRVSRSASRSLSPAARSDRSQSVKSEER 306
            SRS SRSRS S SRS  R  +RR VSRSAS+S SP ARSDRS+SV SEER
Sbjct: 241 PSRSRSRSRSPSSSRSPVRRVIRRSVSRSASQSRSPVARSDRSRSVNSEER 285
[Close]
BLAST of Spo20133.1 vs. NCBI nr
Match: gi|902206685|gb|KNA15538.1| (hypothetical protein SOVF_097130 isoform C [Spinacia oleracea])

HSP 1 Score: 446.0 bits (1146), Expect = 5.100e-122
Identity = 247/284 (86.97%), Postives = 249/284 (87.68%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRS 273
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRS SL +S
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSSSLRQS 282
[Close]
BLAST of Spo20133.1 vs. NCBI nr
Match: gi|902206683|gb|KNA15536.1| (hypothetical protein SOVF_097130 isoform A [Spinacia oleracea])

HSP 1 Score: 446.0 bits (1146), Expect = 5.100e-122
Identity = 247/284 (86.97%), Postives = 249/284 (87.68%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRS 273
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRS SL +S
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSSSLRQS 282
[Close]
BLAST of Spo20133.1 vs. NCBI nr
Match: gi|731326522|ref|XP_010674061.1| (PREDICTED: serine/arginine-rich splicing factor SR30 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 419.5 bits (1077), Expect = 5.100e-114
Identity = 227/256 (88.67%), Postives = 239/256 (93.36%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MT+RIYRTIYVGNLPGDIREREVEDIFYKYGPIV+IDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTRRIYRTIYVGNLPGDIREREVEDIFYKYGPIVDIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGR  SSSD  SSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRAYSSSDRHSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGM+GVV+YA+Y+DMKRA+RKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMSGVVDYANYEDMKRAIRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKS 256
           A+IRVKE SRS SPDDRSRSRS  YSRGRSYSRSRS    +SISPRRNSRRSYSRS ++S
Sbjct: 181 AFIRVKEYSRSPSPDDRSRSRS--YSRGRSYSRSRS----YSISPRRNSRRSYSRSLTRS 240

Query: 257 RSRSPSRSRSRSLSRS 273
            SRS SRSRS SL +S
Sbjct: 241 PSRSRSRSRSSSLRQS 250
[Close]
BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9T7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097130 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 6.500e-140
Identity = 284/318 (89.31%), Postives = 285/318 (89.62%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSL 307
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRSRSLSRSRSPVRRRVSRSASRSL
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSRSLSRSRSPVRRRVSRSASRSL 300
[Close]
BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQF1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g075880 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 9.400e-123
Identity = 252/291 (86.60%), Postives = 266/291 (91.41%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MT+RIYRTIYVGNLPGDIREREVEDIFYKYGPIV+IDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTRRIYRTIYVGNLPGDIREREVEDIFYKYGPIVDIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGR  SSSD  SSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRAYSSSDRHSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGM+GVV+YA+Y+DMKRA+RKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMSGVVDYANYEDMKRAIRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKS 256
           A+IRVKE SRS SPDDRSRSRS  YSRGRSYSRSRS    +SISPRRNSRRSYSRS ++S
Sbjct: 181 AFIRVKEYSRSPSPDDRSRSRS--YSRGRSYSRSRS----YSISPRRNSRRSYSRSLTRS 240

Query: 257 RSRSPSRSRSRSLSRS--RSPVRRRVSRSASRSLSPAARSDRSQSVKSEER 306
            SRS SRSRS S SRS  R  +RR VSRSAS+S SP ARSDRS+SV SEER
Sbjct: 241 PSRSRSRSRSPSSSRSPVRRVIRRSVSRSASQSRSPVARSDRSRSVNSEER 285
[Close]
BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7N0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097130 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.600e-122
Identity = 247/284 (86.97%), Postives = 249/284 (87.68%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRS 273
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRS SL +S
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSSSLRQS 282
[Close]
BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7R2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097130 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.600e-122
Identity = 247/284 (86.97%), Postives = 249/284 (87.68%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRS 273
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRS SL +S
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSSSLRQS 282
[Close]
BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QW99_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134010 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.700e-90
Identity = 201/297 (67.68%), Postives = 240/297 (80.81%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RT+YVGNLPGDIREREVED+FYKYGPI  IDLK+PPRPPGYAFVEFE+ R A+D
Sbjct: 1   MSSRSRRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARHAQD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           A+ GR+GYDFDGHRLRVE AHGGRG+SSS  R S S S  R G  KHT+YRV+++GLPSS
Sbjct: 61  AIDGRDGYDFDGHRLRVELAHGGRGNSSSTDRYS-SQSGGRRGVSKHTEYRVVISGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMR+AG+VCFS VF+D   GG  G+V+Y +Y+DMK A+RKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRKAGDVCFSQVFRDG--GGTTGIVDYTNYEDMKNAIRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKS 256
           +Y+RVKE   S SP  +SRSRSRS SRGRSYSRSRS S+    SP++ SRRS +RSPS+S
Sbjct: 181 SYVRVKEYKGSRSPRGKSRSRSRSRSRGRSYSRSRSPSK----SPKKASRRSPARSPSRS 240

Query: 257 RSRSPSRSRSRSL----SRSRSPV---RRRVSRSASRSLSPAARSDRSQSV-KSEER 306
           RSRSPSRSRSRSL    SRSRSPV   ++ +S+S  + +SP+ R +RS+S+ KS  R
Sbjct: 241 RSRSPSRSRSRSLSRSRSRSRSPVPAQKKNLSKSPKKVVSPSPRRNRSKSLSKSPSR 290
[Close]
BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SR34_ARATH (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana GN=SR34 PE=1 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 6.300e-80
Identity = 188/297 (63.30%), Postives = 221/297 (74.41%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RT+YVGNLPGDIREREVED+F KYGP+V+IDLKVPPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGA----------PKHTDY 136
           A+HGR+GYDFDGHRLRVE AHGGR  SS D R S++G    GG            + +++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 137 RVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLD 196
           RV+VTGLPSSASWQDLKDHMR+ G+VCFS V++D R  G  GVV+Y  Y+DMK A++KLD
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR--GTTGVVDYTCYEDMKYALKKLD 180

Query: 197 DSEFRNAFSRAYIRVKE-DSR--SLSPD-DRSRSRSRSYSRGRSYSRSRSRSRSHSISPR 256
           D+EFRNAFS  Y+RV+E DSR  S SP   RS S+SRS SRGRS SRSRSRSRS S SP+
Sbjct: 181 DTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPK 240

Query: 257 RNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSLSPAARSDRSQS 300
             S R   RSP+KS SRSP     RS SRS SP   R SRS SRS  P+ + + S+S
Sbjct: 241 AKSSR---RSPAKSTSRSPG---PRSKSRSPSP---RRSRSRSRSPLPSVQKEGSKS 285
[Close]
BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SR30_ARATH (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana GN=SR30 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.100e-76
Identity = 181/271 (66.79%), Postives = 212/271 (78.23%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RTIYVGNLPGDIR+ EVED+FYKYGPIV+IDLK+PPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           A++GR+GYDFDG RLRVE AHGGR  S S  R S S S+ R  + + +DYRV+VTGLP S
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPS-RRSDYRVLVTGLPPS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMR+AG+VCFS+VF DR+  GM+GVV+Y++YDDMK A+RKLD +EFRNAFS 
Sbjct: 121 ASWQDLKDHMRKAGDVCFSEVFPDRK--GMSGVVDYSNYDDMKYAIRKLDATEFRNAFSS 180

Query: 197 AYIRVKE-DSRSLS--PDDRSRSRSRSYSRGRSYS---RSRSRSRSHSISPRRNSRRSYS 256
           AYIRV+E +SRS+S  PDD    RSRS SRG S S   +SRS S + SISPR     S S
Sbjct: 181 AYIRVREYESRSVSRSPDDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPL-SRS 240

Query: 257 RSPSKSRSRSPSRSRSRSLSRSRSPVRRRVS 282
           RS   S SRS SRS+SRS SRS SPV   +S
Sbjct: 241 RSLYSSVSRSQSRSKSRSRSRSNSPVSPVIS 267
[Close]
BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SR34B_ARATH (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana GN=SR34B PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.500e-76
Identity = 181/273 (66.30%), Postives = 206/273 (75.46%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RTIYVGNLPGDIREREVED+F KYGP+V+IDLK+PPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRG-----------GAPKHTD 136
           A++GR+GYDFDGH LRVE AHGGR  SS D R SYSG    G           G  + ++
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSE 120

Query: 137 YRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKL 196
           YRV+V+GLPSSASWQDLKDHMR+ GEVCFS VF+D R  G  G+V+Y SY+DMK A   L
Sbjct: 121 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGR--GTTGIVDYTSYEDMKYA---L 180

Query: 197 DDSEFRNAFSRAYIRVKE-DSR--SLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPR 256
           DD+EFRNAFS  Y+RV+E DSR  S SP  R RS S+S SRGRS SRSRSRSRS S S R
Sbjct: 181 DDTEFRNAFSHEYVRVREYDSRRDSRSP-SRGRSYSKSRSRGRSPSRSRSRSRSRSKS-R 240

Query: 257 RNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSP 276
               +S  RSP+KS SRSP RSRSRS SRS SP
Sbjct: 241 SPKAKSLRRSPAKSTSRSP-RSRSRSKSRSLSP 264
[Close]
BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SR34A_ARATH (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana GN=SR34A PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.800e-74
Identity = 175/294 (59.52%), Postives = 211/294 (71.77%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  R+IYVGNLPGDIRE E+EDIFYKYG IV+I+LKVPPRPP Y FVEFE  RDAED
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGS------------SYRGGAPKHT 136
           A+ GR+GY+ DG RLRVE AHGGRG SSSD R  Y G             S R G  +H+
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 137 DYRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRK 196
           ++RV+V GLPSSASWQDLKDHMR+AG+VCF++V +D    G  GVV+Y +YDDMK A+RK
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDS--DGTYGVVDYTNYDDMKYAIRK 180

Query: 197 LDDSEFRNAFSRAYIRVKE----DSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSIS 256
           LDD+EFRN ++R +IRVK+     SRS SP   SRSRSRS SR RS  R RS SRS S+S
Sbjct: 181 LDDTEFRNPWARGFIRVKKYESSRSRSRSP---SRSRSRSRSRSRSRGRGRSHSRSRSLS 240

Query: 257 PRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVR---RRVSRSASRSLSPA 292
             ++ R+  S+SP +S SRS S+SRS S  + +SP R   R  SRS SRS SP+
Sbjct: 241 RSKSPRKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRAMSRSKSRSRSRSRSPS 289
[Close]
BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SRSF1_BOVIN (Serine/arginine-rich splicing factor 1 OS=Bos taurus GN=SRSF1 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.300e-52
Identity = 136/245 (55.51%), Postives = 163/245 (66.53%), Query Frame = 1 

		  

Query: 25  IYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAEDAVHGRNGY 84
           IYVGNLP DIR +++ED+FYKYG I +IDLK     P +AFVEFED RDAEDAV+GR+GY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 85  DFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAP--------KHTDYRVMVTGLPSS 144
           D+DG+RLRVEF   GRG+          G    GGAP        + ++ RV+V+GLP S
Sbjct: 78  DYDGYRLRVEFPRSGRGTGRG------GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPS 137

Query: 145 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFR-NAFS 204
            SWQDLKDHMR AG+VC++DV++D       GVVE+   +DM  AVRKLD+++FR +   
Sbjct: 138 GSWQDLKDHMREAGDVCYADVYRDG-----TGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 197

Query: 205 RAYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSK 261
            AYIRVK D     P   S  RSRS SR RS SRSRS SRS S SPRR SR S   SP  
Sbjct: 198 TAYIRVKVD----GPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRR-SRGSPRYSPRH 246
[Close]
BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT1G02840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 298.9 bits (764), Expect = 3.600e-81
Identity = 188/297 (63.30%), Postives = 221/297 (74.41%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RT+YVGNLPGDIREREVED+F KYGP+V+IDLKVPPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGA----------PKHTDY 136
           A+HGR+GYDFDGHRLRVE AHGGR  SS D R S++G    GG            + +++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 137 RVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLD 196
           RV+VTGLPSSASWQDLKDHMR+ G+VCFS V++D R  G  GVV+Y  Y+DMK A++KLD
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR--GTTGVVDYTCYEDMKYALKKLD 180

Query: 197 DSEFRNAFSRAYIRVKE-DSR--SLSPD-DRSRSRSRSYSRGRSYSRSRSRSRSHSISPR 256
           D+EFRNAFS  Y+RV+E DSR  S SP   RS S+SRS SRGRS SRSRSRSRS S SP+
Sbjct: 181 DTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPK 240

Query: 257 RNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSLSPAARSDRSQS 300
             S R   RSP+KS SRSP     RS SRS SP   R SRS SRS  P+ + + S+S
Sbjct: 241 AKSSR---RSPAKSTSRSPG---PRSKSRSPSP---RRSRSRSRSPLPSVQKEGSKS 285
[Close]
BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT1G09140.1 (SERINE-ARGININE PROTEIN 30)

HSP 1 Score: 288.1 bits (736), Expect = 6.300e-78
Identity = 181/271 (66.79%), Postives = 212/271 (78.23%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RTIYVGNLPGDIR+ EVED+FYKYGPIV+IDLK+PPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           A++GR+GYDFDG RLRVE AHGGR  S S  R S S S+ R  + + +DYRV+VTGLP S
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPS-RRSDYRVLVTGLPPS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMR+AG+VCFS+VF DR+  GM+GVV+Y++YDDMK A+RKLD +EFRNAFS 
Sbjct: 121 ASWQDLKDHMRKAGDVCFSEVFPDRK--GMSGVVDYSNYDDMKYAIRKLDATEFRNAFSS 180

Query: 197 AYIRVKE-DSRSLS--PDDRSRSRSRSYSRGRSYS---RSRSRSRSHSISPRRNSRRSYS 256
           AYIRV+E +SRS+S  PDD    RSRS SRG S S   +SRS S + SISPR     S S
Sbjct: 181 AYIRVREYESRSVSRSPDDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPL-SRS 240

Query: 257 RSPSKSRSRSPSRSRSRSLSRSRSPVRRRVS 282
           RS   S SRS SRS+SRS SRS SPV   +S
Sbjct: 241 RSLYSSVSRSQSRSKSRSRSRSNSPVSPVIS 267
[Close]
BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT4G02430.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.400e-77
Identity = 181/273 (66.30%), Postives = 206/273 (75.46%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RTIYVGNLPGDIREREVED+F KYGP+V+IDLK+PPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRG-----------GAPKHTD 136
           A++GR+GYDFDGH LRVE AHGGR  SS D R SYSG    G           G  + ++
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSE 120

Query: 137 YRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKL 196
           YRV+V+GLPSSASWQDLKDHMR+ GEVCFS VF+D R  G  G+V+Y SY+DMK A   L
Sbjct: 121 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGR--GTTGIVDYTSYEDMKYA---L 180

Query: 197 DDSEFRNAFSRAYIRVKE-DSR--SLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPR 256
           DD+EFRNAFS  Y+RV+E DSR  S SP  R RS S+S SRGRS SRSRSRSRS S S R
Sbjct: 181 DDTEFRNAFSHEYVRVREYDSRRDSRSP-SRGRSYSKSRSRGRSPSRSRSRSRSRSKS-R 240

Query: 257 RNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSP 276
               +S  RSP+KS SRSP RSRSRS SRS SP
Sbjct: 241 SPKAKSLRRSPAKSTSRSP-RSRSRSKSRSLSP 264
[Close]
BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT3G49430.1 (SER/ARG-rich protein 34A)

HSP 1 Score: 280.8 bits (717), Expect = 1.000e-75
Identity = 175/294 (59.52%), Postives = 211/294 (71.77%), Query Frame = 1 

		  

Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  R+IYVGNLPGDIRE E+EDIFYKYG IV+I+LKVPPRPP Y FVEFE  RDAED
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGS------------SYRGGAPKHT 136
           A+ GR+GY+ DG RLRVE AHGGRG SSSD R  Y G             S R G  +H+
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 137 DYRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRK 196
           ++RV+V GLPSSASWQDLKDHMR+AG+VCF++V +D    G  GVV+Y +YDDMK A+RK
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDS--DGTYGVVDYTNYDDMKYAIRK 180

Query: 197 LDDSEFRNAFSRAYIRVKE----DSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSIS 256
           LDD+EFRN ++R +IRVK+     SRS SP   SRSRSRS SR RS  R RS SRS S+S
Sbjct: 181 LDDTEFRNPWARGFIRVKKYESSRSRSRSP---SRSRSRSRSRSRSRGRGRSHSRSRSLS 240

Query: 257 PRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVR---RRVSRSASRSLSPA 292
             ++ R+  S+SP +S SRS S+SRS S  + +SP R   R  SRS SRS SP+
Sbjct: 241 RSKSPRKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRAMSRSKSRSRSRSRSPS 289
[Close]
BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33)

HSP 1 Score: 68.2 bits (165), Expect = 1.000e-11
Identity = 87/246 (35.37%), Postives = 117/246 (47.56%), Query Frame = 1 

		  

Query: 25  IYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAEDAVHGRNGY 84
           +YVG L    R R++E +F +YG + ++D+K       YAFVEF D RDA+DA H  +G 
Sbjct: 13  LYVGRLSSRTRTRDLERLFSRYGRVRDVDMK-----RDYAFVEFGDPRDADDARHYLDGR 72

Query: 85  DFDGHRLRVEFAHGG-RGSSSSDHRSSYSGSS--YRGGAPKHTDYRVMVTGLPSSASWQD 144
           DFDG R+ VEF+ G  RGS   D R    G+   +  G   H               W  
Sbjct: 73  DFDGSRITVEFSRGAPRGSRDFDSRGPPPGAGRCFNCGVDGH---------------W-- 132

Query: 145 LKDHMRRAGEVCFSDVFKDRRYG-GMAGVVEYASYDDMKRAVRKLDDSEFRNAFSRAYIR 204
                      C +  +K++ Y  G  G +E     + K + +KL  S    ++SR+ +R
Sbjct: 133 --------ARDCTAGDWKNKCYRCGERGHIE----RNCKNSPKKLRRS---GSYSRSPVR 192

Query: 205 VKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRS-RSHSISPRRN----SRRSYSRSPSK 262
            +   R  SP  RS SRSRSYSR RS  R R RS    S SP+R     S R+  RSP  
Sbjct: 193 SRSPRRRRSP-SRSLSRSRSYSRSRSPVRRRERSVEERSRSPKRMDDSLSPRARDRSPVL 220
The following BLAST results are available for this feature:
BLAST of Spo20133.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902206684|gb|KNA15537.1|9.3e-14089.3hypothetical protein SOVF_0971... [more]
gi|731326518|ref|XP_010674059.1|1.4e-12286.6PREDICTED: serine/arginine-ric... [more]
gi|902206685|gb|KNA15538.1|5.1e-12286.9hypothetical protein SOVF_0971... [more]
gi|902206683|gb|KNA15536.1|5.1e-12286.9hypothetical protein SOVF_0971... [more]
gi|731326522|ref|XP_010674061.1|5.1e-11488.6PREDICTED: serine/arginine-ric... [more]
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BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R9T7_SPIOL6.5e-14089.3Uncharacterized protein OS=Spi... [more]
A0A0J8CQF1_BETVU9.4e-12386.6Uncharacterized protein OS=Bet... [more]
A0A0K9R7N0_SPIOL3.6e-12286.9Uncharacterized protein OS=Spi... [more]
A0A0K9R7R2_SPIOL3.6e-12286.9Uncharacterized protein OS=Spi... [more]
A0A0K9QW99_SPIOL4.7e-9067.6Uncharacterized protein OS=Spi... [more]
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BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SR34_ARATH6.3e-8063.3Serine/arginine-rich-splicing ... [more]
SR30_ARATH1.1e-7666.7Serine/arginine-rich splicing ... [more]
SR34B_ARATH2.5e-7666.3Serine/arginine-rich splicing ... [more]
SR34A_ARATH1.8e-7459.5Serine/arginine-rich splicing ... [more]
SRSF1_BOVIN4.3e-5255.5Serine/arginine-rich splicing ... [more]
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BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G02840.13.6e-8163.3RNA-binding (RRM/RBD/RNP motif... [more]
AT1G09140.16.3e-7866.7SERINE-ARGININE PROTEIN 30[more]
AT4G02430.21.4e-7766.3RNA-binding (RRM/RBD/RNP motif... [more]
AT3G49430.11.0e-7559.5SER/ARG-rich protein 34A[more]
AT2G37340.11.0e-1135.3arginine/serine-rich zinc knuc... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 128..192
score: 1.3E-9coord: 25..92
score: 3.1
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 127..198
score: 2.7E-6coord: 24..94
score: 2.3
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 23..98
score: 18.973coord: 126..206
score: 9
IPR012677Nucleotide-binding alpha-beta plait domainGENE3D3.30.70.330coord: 17..103
score: 1.1E-26coord: 123..220
score: 1.4
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 23..200
score: 1.57
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 259..275
score: 5.9E-42coord: 1..213
score: 5.9
NoneNo IPR availablePANTHERPTHR24012:SF487SUBFAMILY NOT NAMEDcoord: 259..275
score: 5.9E-42coord: 1..213
score: 5.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006376 mRNA splice site selection
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:1902358 sulfate transmembrane transport
biological_process GO:0019538 protein metabolic process
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0048856 anatomical structure development
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0010214 seed coat development
biological_process GO:0009904 chloroplast accumulation movement
biological_process GO:0007018 microtubule-based movement
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0006857 oligopeptide transport
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0009611 response to wounding
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0009845 seed germination
biological_process GO:0030259 lipid glycosylation
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0010286 heat acclimation
biological_process GO:0015810 aspartate transmembrane transport
biological_process GO:0015804 neutral amino acid transport
biological_process GO:0015827 tryptophan transport
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0006950 response to stress
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006557 S-adenosylmethioninamine biosynthetic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0006597 spermine biosynthetic process
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006811 ion transport
biological_process GO:0048024 regulation of mRNA splicing, via spliceosome
biological_process GO:0051013 microtubule severing
biological_process GO:0006002 fructose 6-phosphate metabolic process
biological_process GO:0006012 galactose metabolic process
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0006574 valine catabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0006629 lipid metabolic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006810 transport
biological_process GO:0009688 abscisic acid biosynthetic process
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0006040 amino sugar metabolic process
biological_process GO:0009966 regulation of signal transduction
biological_process GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0065007 biological regulation
biological_process GO:0001101 response to acid chemical
biological_process GO:0009725 response to hormone
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006554 lysine catabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0006096 glycolytic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0042545 cell wall modification
biological_process GO:0015969 guanosine tetraphosphate metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0019260 1,2-dichloroethane catabolic process
biological_process GO:0046251 limonene catabolic process
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0006699 bile acid biosynthetic process
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006547 histidine metabolic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:0050896 response to stimulus
biological_process GO:0030001 metal ion transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0006537 glutamate biosynthetic process
biological_process GO:0055129 L-proline biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016310 phosphorylation
biological_process GO:0006833 water transport
biological_process GO:0042128 nitrate assimilation
biological_process GO:0009615 response to virus
biological_process GO:0006826 iron ion transport
biological_process GO:0034220 ion transmembrane transport
biological_process GO:0015793 glycerol transport
biological_process GO:0009992 cellular water homeostasis
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0009651 response to salt stress
biological_process GO:0009414 response to water deprivation
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0010106 cellular response to iron ion starvation
biological_process GO:0008152 metabolic process
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0009791 post-embryonic development
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0005992 trehalose biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0016567 protein ubiquitination
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009617 response to bacterium
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009408 response to heat
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009639 response to red or far red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0050789 regulation of biological process
cellular_component GO:0035061 interchromatin granule
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016607 nuclear speck
cellular_component GO:0005622 intracellular
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005874 microtubule
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005945 6-phosphofructokinase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0005618 cell wall
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005871 kinesin complex
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005576 extracellular region
cellular_component GO:0008352 katanin complex
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005773 vacuole
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005887 integral component of plasma membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005788 endoplasmic reticulum lumen
cellular_component GO:0016020 membrane
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0015172 acidic amino acid transmembrane transporter activity
molecular_function GO:0015175 neutral amino acid transmembrane transporter activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0043531 ADP binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000822 inositol hexakisphosphate binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0004014 adenosylmethionine decarboxylase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016161 beta-amylase activity
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0051087 chaperone binding
molecular_function GO:0004352 glutamate dehydrogenase (NAD+) activity
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0052663 antheraxanthin epoxidase activity
molecular_function GO:0052662 zeaxanthin epoxidase activity
molecular_function GO:0031418 L-ascorbic acid binding
molecular_function GO:0004805 trehalose-phosphatase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0003729 mRNA binding
molecular_function GO:0004656 procollagen-proline 4-dioxygenase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0009540 zeaxanthin epoxidase [overall] activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity
molecular_function GO:0050105 L-gulonolactone oxidase activity
molecular_function GO:0003885 D-arabinono-1,4-lactone oxidase activity
molecular_function GO:0047911 galacturan 1,4-alpha-galacturonidase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0004029 aldehyde dehydrogenase (NAD) activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008271 secondary active sulfate transmembrane transporter activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0004349 glutamate 5-kinase activity
molecular_function GO:0004350 glutamate-5-semialdehyde dehydrogenase activity
molecular_function GO:0003872 6-phosphofructokinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005488 binding
molecular_function GO:0015293 symporter activity
molecular_function GO:0008728 GTP diphosphokinase activity
molecular_function GO:0016906 sterol 3-beta-glucosyltransferase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0020037 heme binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0080048 GDP-D-glucose phosphorylase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0015250 water channel activity
molecular_function GO:0015254 glycerol channel activity
molecular_function GO:0046577 long-chain-alcohol oxidase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo176600.80Barchart | Table
Spo063300.79Barchart | Table
Spo136470.78Barchart | Table
Spo241560.77Barchart | Table
Spo078130.76Barchart | Table
Spo020770.76Barchart | Table
Spo010870.76Barchart | Table
Spo045920.76Barchart | Table
Spo030150.75Barchart | Table
Spo121080.75Barchart | Table
Spo167510.75Barchart | Table
Spo254440.75Barchart | Table
Spo263350.74Barchart | Table
Spo052570.74Barchart | Table
Spo011740.73Barchart | Table
Spo038990.73Barchart | Table
Spo046330.73Barchart | Table
Spo152930.73Barchart | Table
Spo035510.73Barchart | Table
Spo005000.73Barchart | Table
Spo017960.73Barchart | Table
Spo055480.73Barchart | Table
Spo126870.72Barchart | Table
Spo016070.72Barchart | Table
Spo156910.72Barchart | Table
Spo152560.72Barchart | Table
Spo017210.72Barchart | Table
Spo015820.72Barchart | Table
Spo213780.72Barchart | Table
Spo128890.71Barchart | Table
Spo219600.71Barchart | Table
Spo023540.71Barchart | Table
Spo089210.71Barchart | Table
Spo153070.71Barchart | Table
Spo094210.71Barchart | Table
Spo157030.71Barchart | Table
Spo069750.71Barchart | Table
Spo016970.71Barchart | Table
Spo217490.71Barchart | Table
Spo126560.71Barchart | Table
Spo160150.70Barchart | Table
Spo098460.70Barchart | Table
Spo102800.70Barchart | Table
Spo264390.70Barchart | Table
Spo149480.70Barchart | Table
Spo171570.70Barchart | Table
Spo130300.70Barchart | Table
Spo122830.70Barchart | Table
Spo265570.70Barchart | Table
Spo085950.70Barchart | Table
Spo067830.70Barchart | Table
Spo098210.70Barchart | Table
Spo255620.69Barchart | Table
Spo060120.69Barchart | Table
Spo016250.69Barchart | Table
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