Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGGTAGGAGCAACAGGTCTAAGGGTACAGGAGGGTGCAGAGCCTTATGTTGCACTGACTGCAGAACATCAATAGAAGGTGGTGAAAGCTCTAGGTCGTCAGACCGTTACGCATCAATCTCAACCATCTCACATTTCATGGTCCAAGAGAGATTGAATCAAATGATTAAGGAAAGCGAGGAAGATCAAGCAAGAAATTTAACTGAGGCAAGAAAAAGGAAGCAAAAGCAGGTAGTAAAAAAAGCCACTACTAGTAGTAGCAGCAACAGCAACAACAACAACAACAATAGAAGGTTACATCTGATGCTTGCTATGGAGACATCTTCTCATAATCCAAGGGAAGATTTTAGGCGGTCCATGGTGGAGGTGATACTAGCAAACCGTATAAAAGATCCAAAGGACCTCCGGTATATATTGAAGTGTTACACTTCAATGAATTCTGTTGAGTATAGAGGGATTATACTTGAGGTTTTCTACCAGGTTTGCACTGATATTTTCTTTTGCTGTAAATGCCACTGATGAGATGATATTGTACACATTAATAATTTTTCATTTCAGCCACCTAAATTATGTAAAATCTGAAAAACTGTATTTCTAAATGAAGAACTGTATTTCTTAATATACTGTTAAGTGTTAACGTCATCCTGTAGTAGGATTTGCAGTGTAGTATTTCCTGTAATGGAAGCACCGTGAAGCAGTCCATACAAACAGAGAGGTTTAATACAGGATTCCTGCATACGTGACTGCTAATTAAAAACGGAGGGAATAAAATAAAAGATCATAGAATTTGATGTACTACGTATTGATGTTTTTTATACTACAGTATAGTACATGAGTAACACTAACTTAGACGATTTTGTTACTTCATTTATAATTCAAAGTGAGATTAGGAGATTAGAAGTACCTGTATTATATATTATTCAAAGTGAAATCAGGAGATTTTATTAATGTGCTAGGAGGTCCAACTTCCAAGCCAGTTAAATAGAACTGACGTTTATACTACAGAGAAGGTTTTAAAGTTACCAAAACTGTAAGTAGGAAGTAGGAACTGTTATAGTGCAAAGGAAAGCTTTAAAATGCTTCCATGAAAGTCACTACAGCAAGTAGCTAGCCAGCATACGGCGTACCTGATTCAACCATGTATTATGATGAAGCATACCACATCCTTGATCAAATAATGCTCGGCTTGATGTTTATTACTCTCCTACATACATATGAGGCATTATTAACTCGCAATTCACAACAAAATAAATCCTTGAAAGGGGAACATGACACTTACAAACAGAGAGAAAAATGAACCTGTGTACCAAGTATAACTTGATTTTTACACTATCCATCTGGATTTAGTTGTCACATTACTAGTTCAAATTGCAAAATAAGTGTGATTATCAATTCCAAACGTCGGACGGATGGGAATAAATAAAAACCTCATCTTTCTTGTATTTGACTGACTGAAATTTACTGTATATAATCACTGAAAGCATATTACAGCATCTCTTTGAACTATATACATATACAAGTAGCAGTTCAACATATACAAGTAGCAGTTCAAGCTAGTTACCATTCTGTATAATCATTTGAACCAAATACGGGTGGCTTTATTGCGACTACATATATAGTATGTAACCCAGTCTAGATTGCAGTGTATACTAATTAATTAA ATGCAAGGTAGGAGCAACAGGTCTAAGGGTACAGGAGGGTGCAGAGCCTTATGTTGCACTGACTGCAGAACATCAATAGAAGGTGGTGAAAGCTCTAGGTCGTCAGACCGTTACGCATCAATCTCAACCATCTCACATTTCATGGTCCAAGAGAGATTGAATCAAATGATTAAGGAAAGCGAGGAAGATCAAGCAAGAAATTTAACTGAGGCAAGAAAAAGGAAGCAAAAGCAGGTAGTAAAAAAAGCCACTACTAGTAGTAGCAGCAACAGCAACAACAACAACAACAATAGAAGGTTACATCTGATGCTTGCTATGGAGACATCTTCTCATAATCCAAGGGAAGATTTTAGGCGGTCCATGGTGGAGGTGATACTAGCAAACCGTATAAAAGATCCAAAGGACCTCCGGTATATATTGAAGTGTTACACTTCAATGAATTCTGTTGAGTATAGAGGGATTATACTTGAGGTTTTCTACCAGTATGTAACCCAGTCTAGATTGCAGTGTATACTAATTAATTAA ATGCAAGGTAGGAGCAACAGGTCTAAGGGTACAGGAGGGTGCAGAGCCTTATGTTGCACTGACTGCAGAACATCAATAGAAGGTGGTGAAAGCTCTAGGTCGTCAGACCGTTACGCATCAATCTCAACCATCTCACATTTCATGGTCCAAGAGAGATTGAATCAAATGATTAAGGAAAGCGAGGAAGATCAAGCAAGAAATTTAACTGAGGCAAGAAAAAGGAAGCAAAAGCAGGTAGTAAAAAAAGCCACTACTAGTAGTAGCAGCAACAGCAACAACAACAACAACAATAGAAGGTTACATCTGATGCTTGCTATGGAGACATCTTCTCATAATCCAAGGGAAGATTTTAGGCGGTCCATGGTGGAGGTGATACTAGCAAACCGTATAAAAGATCCAAAGGACCTCCGGTATATATTGAAGTGTTACACTTCAATGAATTCTGTTGAGTATAGAGGGATTATACTTGAGGTTTTCTACCAGTATGTAACCCAGTCTAGATTGCAGTGTATACTAATTAATTAA MQGRSNRSKGTGGCRALCCTDCRTSIEGGESSRSSDRYASISTISHFMVQERLNQMIKESEEDQARNLTEARKRKQKQVVKKATTSSSSNSNNNNNNRRLHLMLAMETSSHNPREDFRRSMVEVILANRIKDPKDLRYILKCYTSMNSVEYRGIILEVFYQYVTQSRLQCILIN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20111.1 vs. NCBI nr
Match: gi|870852143|gb|KMT04087.1| (hypothetical protein BVRB_8g185410 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 210.3 bits (534), Expect = 2.700e-51 Identity = 123/163 (75.46%), Postives = 141/163 (86.50%), Query Frame = 1
BLAST of Spo20111.1 vs. NCBI nr
Match: gi|802563882|ref|XP_012067125.1| (PREDICTED: probable transcription repressor OFP9 [Jatropha curcas]) HSP 1 Score: 134.0 bits (336), Expect = 2.500e-28 Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = 1
BLAST of Spo20111.1 vs. NCBI nr
Match: gi|702331686|ref|XP_010054609.1| (PREDICTED: probable transcription repressor OFP9 [Eucalyptus grandis]) HSP 1 Score: 125.9 bits (315), Expect = 6.700e-26 Identity = 79/170 (46.47%), Postives = 106/170 (62.35%), Query Frame = 1
BLAST of Spo20111.1 vs. NCBI nr
Match: gi|566164177|ref|XP_006383849.1| (hypothetical protein POPTR_0004s00540g [Populus trichocarpa]) HSP 1 Score: 125.6 bits (314), Expect = 8.700e-26 Identity = 75/160 (46.88%), Postives = 107/160 (66.88%), Query Frame = 1
BLAST of Spo20111.1 vs. NCBI nr
Match: gi|255564854|ref|XP_002523421.1| (PREDICTED: transcription repressor OFP5 [Ricinus communis]) HSP 1 Score: 125.2 bits (313), Expect = 1.100e-25 Identity = 72/153 (47.06%), Postives = 100/153 (65.36%), Query Frame = 1
BLAST of Spo20111.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSF6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g185410 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.900e-51 Identity = 123/163 (75.46%), Postives = 141/163 (86.50%), Query Frame = 1
BLAST of Spo20111.1 vs. UniProtKB/TrEMBL
Match: A0A067LC45_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01853 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.700e-28 Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = 1
BLAST of Spo20111.1 vs. UniProtKB/TrEMBL
Match: F6HRE8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00380 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.700e-26 Identity = 80/161 (49.69%), Postives = 103/161 (63.98%), Query Frame = 1
BLAST of Spo20111.1 vs. UniProtKB/TrEMBL
Match: B9N8G2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s00540g PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 6.100e-26 Identity = 75/160 (46.88%), Postives = 107/160 (66.88%), Query Frame = 1
BLAST of Spo20111.1 vs. UniProtKB/TrEMBL
Match: B9SBQ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0344380 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 7.900e-26 Identity = 72/153 (47.06%), Postives = 100/153 (65.36%), Query Frame = 1
BLAST of Spo20111.1 vs. ExPASy Swiss-Prot
Match: OFP9_ARATH (Probable transcription repressor OFP9 OS=Arabidopsis thaliana GN=OFP9 PE=3 SV=2) HSP 1 Score: 90.1 bits (222), Expect = 2.500e-17 Identity = 54/128 (42.19%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of Spo20111.1 vs. ExPASy Swiss-Prot
Match: OFP3_ARATH (Transcription repressor OFP3 OS=Arabidopsis thaliana GN=OFP3 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.400e-7 Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 1
BLAST of Spo20111.1 vs. TAIR (Arabidopsis)
Match: AT5G58360.1 (ovate family protein 3) HSP 1 Score: 57.8 bits (138), Expect = 7.900e-9 Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 1
BLAST of Spo20111.1 vs. TAIR (Arabidopsis)
Match: AT1G06920.1 (ovate family protein 4) HSP 1 Score: 51.2 bits (121), Expect = 7.400e-7 Identity = 36/131 (27.48%), Postives = 65/131 (49.62%), Query Frame = 1
BLAST of Spo20111.1 vs. TAIR (Arabidopsis)
Match: AT2G36026.1 (Ovate family protein) HSP 1 Score: 50.1 bits (118), Expect = 1.600e-6 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 1
BLAST of Spo20111.1 vs. TAIR (Arabidopsis)
Match: AT3G52525.1 (ovate family protein 6) HSP 1 Score: 50.1 bits (118), Expect = 1.600e-6 Identity = 24/56 (42.86%), Postives = 39/56 (69.64%), Query Frame = 1
BLAST of Spo20111.1 vs. TAIR (Arabidopsis)
Match: AT5G01840.1 (ovate family protein 1) HSP 1 Score: 48.9 bits (115), Expect = 3.700e-6 Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20111.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20111.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20111.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo20111.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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