Spo19966 (gene)

Overview
NameSpo19966
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_217 : 824648 .. 824966 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGCGCGTTGCAAACTATCAAGTTGATGACATATTTTGCCACTTAACTTCAGGTTTTATACGACGATTGTAAAATCATCCCAAACAACGAGCGAATGTGTGTTTTACAACTAGAACCGCATTTGAGAGTTGAGTCAAGTGACGACGCCCCATTGCCAAGAACCATCCTTCATCTTCACGATTCTCCATCGTCGTTTGTTGCATCGCCATTCCTTGACATTGACAGCTCGCCATCTTTCTCTCTCTTCCCCTGTTGTTCCCCCATTTCAATCACACCCTTATTCCACAGTTTCCGCCATTGCAGCACCTTTAACTTTTAA

mRNA sequence

CCGCGCGTTGCAAACTATCAAGTTGATGACATATTTTGCCACTTAACTTCAGGTTTTATACGACGATTGTAAAATCATCCCAAACAACGAGCGAATGTGTGTTTTACAACTAGAACCGCATTTGAGAGTTGAGTCAAGTGACGACGCCCCATTGCCAAGAACCATCCTTCATCTTCACGATTCTCCATCGTCGTTTGTTGCATCGCCATTCCTTGACATTGACAGCTCGCCATCTTTCTCTCTCTTCCCCTGTTGTTCCCCCATTTCAATCACACCCTTATTCCACAGTTTCCGCCATTGCAGCACCTTTAACTTTTAA

Coding sequence (CDS)

ATGTGTGTTTTACAACTAGAACCGCATTTGAGAGTTGAGTCAAGTGACGACGCCCCATTGCCAAGAACCATCCTTCATCTTCACGATTCTCCATCGTCGTTTGTTGCATCGCCATTCCTTGACATTGACAGCTCGCCATCTTTCTCTCTCTTCCCCTGTTGTTCCCCCATTTCAATCACACCCTTATTCCACAGTTTCCGCCATTGCAGCACCTTTAACTTTTAA

Protein sequence

MCVLQLEPHLRVESSDDAPLPRTILHLHDSPSSFVASPFLDIDSSPSFSLFPCCSPISITPLFHSFRHCSTFNF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19966.1Spo19966.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19966.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19966.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19966.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19966.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0016301 kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo248670.70Barchart | Table
Spo110560.69Barchart | Table
Spo066970.68Barchart | Table
Spo263110.67Barchart | Table
Spo272360.65Barchart | Table