Spo19958 (gene)

Overview
NameSpo19958
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionOxidoreductase/transition metal ion-binding protein
LocationSuper_scaffold_217 : 781728 .. 785665 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGATTAGATTCTTCATTAACAAATGGTTTAAGGACAATTTAATGGATTTTATTAAGTGACTTGACCCATCCCGAAATTCTCAATAAACCCCAACTGCCGTTTTATCCTTCCCACTTTTCATAGTGCTCCCCTCTACTCTCTCCTTCCACAAAAGGTAATTTCCGCGCTCATTTCTGGTTGAATTCTGTTGTTAATTTCCCTATGTTTCTTTTATCTTTGCTGAAAACCTTTGTAATTATGCATGTATGCATGTATGGTTGATAAATTTCTGATTATGTTTTCGAATTTGTTATTTGTGTACTTTTGACTAAAATTAGTTAAGAAGAGTATGAATTTATGCACTCTTAGACTATATCTGGGTTTTGGTTGTCCATTAAACTAATAAAACCCCATTTAATAGAGAAGTGTTGTGTATTTAGAGAGAGAAAGCGGGAGGCGAAAAGCAGGGTACATGGTATAACCCTCTTTATTTGATTGAGTTTCTTTTATACAAATTGAGCAAATACCCAATTCAAATCTCCTAAGAATACCCCTACCCACAAAAATTTGATACATTTGTTGTTGAGTTTGATGAGAATTTAGCTTGAATATTTATTTGTAATTGAAGATTAGTTGGTATAACAGTGAGGTTTTGTTCTCTGAAATTAATCAAATTTGAGATTAGTTAGTGTATAGAGGAATGGTATTGTAGTACTAAGACGATTTCTGAGTATGGGATAAAATGAGCTAGACTTTTCATGCTTAAGTTTGAACTTCAATTTAGTGTATTTTGTTGTTTGAATTGACAGCATGAAATTGATTGGGTAATTTGGGTAGCATTTGGGCTTTAATGTTGTGTTCCGTTGTTGTGTGTGATTTCATGCAGCAGTGAGTGATAAAAGTTCCAATGCTTGGTTGTTCGGGTTAATACGAAGATAACTTCTTTGTGAGTTCTTGGACTATAGAGTTCGTGATCATGTCATTCACAACTTCTATGTATCATGGCGGATGCCCACTAGAACAAGCCAAGACTACAGGATGCTTAGCATCCGCTCAACTTAGTAATTTCATACTTTTTCCGAACCTTGTTTATTCAAATTGGAAATGCTCAAAACCTAGATTTTATCAGGCCCGAAATGGGGGCTGTAGAATCATTTTCATGGACAAAGGGTGTAGGCAACAGCTTAGGGTCCGAAGTTCAGAGAGCGGATTTGAGGCACTGGATGTTGAGGTGCAAGATGATGGGGAGCTTGATGGACCTCAAAAGAGGTTTAGGGAAAGAGGAGACGAGAAAGATTACGACCGAGACCCAGAATTTGCTGAAATTCTTGGAAGCTGCCTCGATGACCCGGATAAGGCTCAGTCCAAAGTAAGATGTTTTTCTTAAAATGGTTAATGTATATAGCTTATAGTGTATGTTATACTGGGTGAATTTAGCTGATTAATCATTGTAGGGTTAACTAGTGAACGGGAAATAGTTCTAAGTGATAATTTTCAGATGGAAGAAAGGTTGAGGAAGAAAAGGAACAAAATACTGCATACAAAAACTGGTTCCGGCTCACCCATGAAAGTCACTTTCAACAAGTAAGTTCTGGCTTCCATCTTTGAAATTCGTGGCATCTGCTTATTAGTGACTGTTGGTGTTTTTTGAAGTGTATTATCTACACACAAATACATAGAAAGGGGAGTATCTAAAAATGAGTAAAATGTGTAATTACTAAGTCCGTAGACTGTGGAAACTATCAGATTGTAGGTGTAAGTCCGATCTGAATGTGCTGAGTCTGCCCCTTTTTGTTTTCCCTTGATTTGAGATAATTACTGGTAATCACATAACAATATTAGCTTTAGCTTTTGGTTATTAGTTTATTTCTCCTTCCATCTTTTAAAGTTCCTCCCCTTTATCCCGTTTATCGAATTGGTGTTTCTTTTTGTTCTTCCCATTTGGAAATCTATTTCATTTATGGCAAATAATTCTCCCTAAACTACTCTCACCCTAAAGTTCTAATTCCAACTCTATCCCACCTTTAATCCCCTAACCTACCTCACTTGCATTCTTTTTTAATACTTTCTCTCAGCTTCAATTACTGCCAAAGTACAATCTTTTGTTTTTTAAATACTTTTTATCCCCTTCAAGCAATGCAAAGTACAATGTTTTTGTTTTTAAAATAATTTCTCCCTCTTTCAATCATTGCAAGATTCATATTTTCTTAATTCCCTCCCTGATTGCAAATCTGAATATTATGGAACAGAGGGAGTAGTAATTTAGTATTGCCAATTTGCTTTTGGTTTTCTTGGATCTTTGAGTCCTTAAGATAATTCTGATCATACCTTAAAAAAGGCTGAAAGGTGCCTTCTGTTGCTATCTTGTTTTGTACGATAATGTCACTGTTTATGGAATAATAAAATGTTTTTAATTTGAGTGATTTGTTTTTGCTTCTTTTGGTGGTTTGCAGATTTGATTTCTCTAATTCATATATATGGTTCGAGTTTTACAATCCCCCGCTGCAGAAAGATGTTTCTTTGATTTGTGATGTAAGTCACTATTCTTCAAAAATTAGGATATACTTCATATGATGCTAAATGAATCAAATTTAATTGAACATAGGGTATAAAGTTAAAATAATATCACATACCCTTGCTGGCTTACAGGTGATCCGATCTTGGCATATAATTGGACGTCTTGGTGGTTGCAATTCATTGAATATGCAGGTAATGCTTTTCTTCACAAGTTTGTTCTTAGATGTAGTATCGAAAATTTGGAGATAAGGTATTGTTGAGCTTTGGCCCATATTTAGCAGATATACTTCTGCAAAAAATTGATGGTTCGGTAGTTCCTCATACTATTCTTTTCATCTATGATTGGACTACAAGTGAATGAGTGATTGTGCAACCTCTTAGTCCTATTGTTTTGGGGTGTATGTATACAAATTAGCACGATCATTTAGCTGCCTGAACTATCTGATAATGTTTATGCTCCTGGTTATTCTATGAATTCTCTGGTTAATGAACTTATGAACATCAGACAACATTTCATTGATTCGTGCATTGGAAAGGTATCTTTTTTTTGTATAATCAGCTCAATGCAATTAATCATCAAGTAGAAAGAAGGGGAGGAAACCAAGCCATCAAATAAATTGAATTTCTGTTGTTTCGGATTTCTTTATCTTTTGGCTGAAAGGTTTTGTTACTTGCTGAACCAGCTCAAGCCTAAAGGTCTTACCTATTTCCTTTCCTATATTTATGTATCAATATTAGCTTTTCTGGGATAAGAAGAAGTTGACAGTACCAAATCTATATGAAGATTAGATGTTTATGCTAGATTAATTTTCCATTAGACGAGGTTGGAAGAGAACTTGTGAAGAAGTGACACCATAAAAAAGCTAATTGCACTGCTCTACCTCACCCCTTTACGAGCATCCTATTTGTACATCATTTATTTCTGAGTAAAGAAATTACGTCCTTGGATTGTCATGTATTATCACGATTACTTTCTAAAGCAAAAGCATTCTGTGATTTGATGTAGTTATCACAATCCCCGTTCGACAAAAGACTAAGTTATGACGCTATTGAAGGAGCAAATGTTGATCCAACCACCTTTTATAACATTGGGGATCTTGAGATTCAAGACAATGTAGCAAGAATATGGTATGGAGTTCAATTTGAAATGAAAGTGATTTTTGCTTTGGTGACAATTTTTGGCTTCCAATTCACAGTTTCTTATTAACAAGTATTGGCCGTAAAAAGAAATGGTCAGGGTAACAAGTATTTTTCCCTTGATTTTGATTTTGACTTTGGTTTGGTAGTTACATAATGCAAGACAATAGTGTATGTATGGTTTGTTTCATTGCTCTTATTTATTTGATATATGATATATGGTGTCAGGGTTGATATTGGGACGAGTGAATCACTGTTGCTAGATGTCCTATTGAATGCATTGACACAGATAAGCTCTGAGTAA

mRNA sequence

GAGATTAGATTCTTCATTAACAAATGGTTTAAGGACAATTTAATGGATTTTATTAAGTGACTTGACCCATCCCGAAATTCTCAATAAACCCCAACTGCCGTTTTATCCTTCCCACTTTTCATAGTGCTCCCCTCTACTCTCTCCTTCCACAAAAGTGAGTGATAAAAGTTCCAATGCTTGGTTGTTCGGGTTAATACGAAGATAACTTCTTTGTGAGTTCTTGGACTATAGAGTTCGTGATCATGTCATTCACAACTTCTATGTATCATGGCGGATGCCCACTAGAACAAGCCAAGACTACAGGATGCTTAGCATCCGCTCAACTTAGTAATTTCATACTTTTTCCGAACCTTGTTTATTCAAATTGGAAATGCTCAAAACCTAGATTTTATCAGGCCCGAAATGGGGGCTGTAGAATCATTTTCATGGACAAAGGGTGTAGGCAACAGCTTAGGGTCCGAAGTTCAGAGAGCGGATTTGAGGCACTGGATGTTGAGGTGCAAGATGATGGGGAGCTTGATGGACCTCAAAAGAGGTTTAGGGAAAGAGGAGACGAGAAAGATTACGACCGAGACCCAGAATTTGCTGAAATTCTTGGAAGCTGCCTCGATGACCCGGATAAGGCTCAGTCCAAAATGGAAGAAAGGTTGAGGAAGAAAAGGAACAAAATACTGCATACAAAAACTGGTTCCGGCTCACCCATGAAAGTCACTTTCAACAAATTTGATTTCTCTAATTCATATATATGGTTCGAGTTTTACAATCCCCCGCTGCAGAAAGATGTTTCTTTGATTTGTGATGTGATCCGATCTTGGCATATAATTGGACGTCTTGGTGGTTGCAATTCATTGAATATGCAGTTATCACAATCCCCGTTCGACAAAAGACTAAGTTATGACGCTATTGAAGGAGCAAATGTTGATCCAACCACCTTTTATAACATTGGGGATCTTGAGATTCAAGACAATGTAGCAAGAATATGGGTTGATATTGGGACGAGTGAATCACTGTTGCTAGATGTCCTATTGAATGCATTGACACAGATAAGCTCTGAGTAA

Coding sequence (CDS)

ATGTCATTCACAACTTCTATGTATCATGGCGGATGCCCACTAGAACAAGCCAAGACTACAGGATGCTTAGCATCCGCTCAACTTAGTAATTTCATACTTTTTCCGAACCTTGTTTATTCAAATTGGAAATGCTCAAAACCTAGATTTTATCAGGCCCGAAATGGGGGCTGTAGAATCATTTTCATGGACAAAGGGTGTAGGCAACAGCTTAGGGTCCGAAGTTCAGAGAGCGGATTTGAGGCACTGGATGTTGAGGTGCAAGATGATGGGGAGCTTGATGGACCTCAAAAGAGGTTTAGGGAAAGAGGAGACGAGAAAGATTACGACCGAGACCCAGAATTTGCTGAAATTCTTGGAAGCTGCCTCGATGACCCGGATAAGGCTCAGTCCAAAATGGAAGAAAGGTTGAGGAAGAAAAGGAACAAAATACTGCATACAAAAACTGGTTCCGGCTCACCCATGAAAGTCACTTTCAACAAATTTGATTTCTCTAATTCATATATATGGTTCGAGTTTTACAATCCCCCGCTGCAGAAAGATGTTTCTTTGATTTGTGATGTGATCCGATCTTGGCATATAATTGGACGTCTTGGTGGTTGCAATTCATTGAATATGCAGTTATCACAATCCCCGTTCGACAAAAGACTAAGTTATGACGCTATTGAAGGAGCAAATGTTGATCCAACCACCTTTTATAACATTGGGGATCTTGAGATTCAAGACAATGTAGCAAGAATATGGGTTGATATTGGGACGAGTGAATCACTGTTGCTAGATGTCCTATTGAATGCATTGACACAGATAAGCTCTGAGTAA

Protein sequence

MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRIIFMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVARIWVDIGTSESLLLDVLLNALTQISSE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19958.1Spo19958.1mRNA


Homology
[Close]
BLAST of Spo19958.1 vs. NCBI nr
Match: gi|902239520|gb|KNA25636.1| (hypothetical protein SOVF_004710 [Spinacia oleracea])

HSP 1 Score: 557.0 bits (1434), Expect = 1.800e-155
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII 60
           MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII
Sbjct: 1   MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII 60

Query: 61  FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS 120
           FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS
Sbjct: 61  FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS 120

Query: 121 CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD 180
           CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD
Sbjct: 121 CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD 180

Query: 181 VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ 240
           VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ
Sbjct: 181 VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ 240

Query: 241 DNVARIWVDIGTSESLLLDVLLNALTQISSE 272
           DNVARIWVDIGTSESLLLDVLLNALTQISS+
Sbjct: 241 DNVARIWVDIGTSESLLLDVLLNALTQISSD 271
[Close]
BLAST of Spo19958.1 vs. NCBI nr
Match: gi|731349364|ref|XP_010685956.1| (PREDICTED: uncharacterized protein LOC104900270 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 431.8 bits (1109), Expect = 8.900e-118
Identity = 206/266 (77.44%), Postives = 238/266 (89.47%), Query Frame = 1 

		  

Query: 6   SMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRIIFMDKG 65
           +++  GCPLE AK  GCL   Q +NF L   +VYSN K SKP+  +A+N  CRI+ M++ 
Sbjct: 3   TIHQRGCPLELAKVAGCLTPIQHNNFSLLSTVVYSNRKLSKPKKCKAKNWDCRIMLMEQR 62

Query: 66  CRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDP 125
           CRQQLR + S++ +E LD E+QD+GELDGPQ+RFRER +EKDYD+DPEFAEILGSCLD+P
Sbjct: 63  CRQQLRAQYSDNQYEVLDDELQDEGELDGPQRRFREREEEKDYDKDPEFAEILGSCLDNP 122

Query: 126 DKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLIC 185
           DKAQSKMEERLRKKRNKIL TKTGSGSPMKVTFNKFD+SNSYIWFEF+NPPLQKDVSLIC
Sbjct: 123 DKAQSKMEERLRKKRNKILQTKTGSGSPMKVTFNKFDYSNSYIWFEFWNPPLQKDVSLIC 182

Query: 186 DVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVAR 245
           DVIRSWHIIGRLGGCNSLNMQL++SPFDKRLSYDAI+GANVDPTTFYNIGDLEIQDN+AR
Sbjct: 183 DVIRSWHIIGRLGGCNSLNMQLTESPFDKRLSYDAIQGANVDPTTFYNIGDLEIQDNLAR 242

Query: 246 IWVDIGTSESLLLDVLLNALTQISSE 272
           IWVDIGT++SL+LDVL+NALTQISS+
Sbjct: 243 IWVDIGTNDSLILDVLMNALTQISSD 268
[Close]
BLAST of Spo19958.1 vs. NCBI nr
Match: gi|731349362|ref|XP_010685955.1| (PREDICTED: uncharacterized protein LOC104900270 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 431.8 bits (1109), Expect = 8.900e-118
Identity = 206/266 (77.44%), Postives = 238/266 (89.47%), Query Frame = 1 

		  

Query: 6   SMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRIIFMDKG 65
           +++  GCPLE AK  GCL   Q +NF L   +VYSN K SKP+  +A+N  CRI+ M++ 
Sbjct: 27  TIHQRGCPLELAKVAGCLTPIQHNNFSLLSTVVYSNRKLSKPKKCKAKNWDCRIMLMEQR 86

Query: 66  CRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDP 125
           CRQQLR + S++ +E LD E+QD+GELDGPQ+RFRER +EKDYD+DPEFAEILGSCLD+P
Sbjct: 87  CRQQLRAQYSDNQYEVLDDELQDEGELDGPQRRFREREEEKDYDKDPEFAEILGSCLDNP 146

Query: 126 DKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLIC 185
           DKAQSKMEERLRKKRNKIL TKTGSGSPMKVTFNKFD+SNSYIWFEF+NPPLQKDVSLIC
Sbjct: 147 DKAQSKMEERLRKKRNKILQTKTGSGSPMKVTFNKFDYSNSYIWFEFWNPPLQKDVSLIC 206

Query: 186 DVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVAR 245
           DVIRSWHIIGRLGGCNSLNMQL++SPFDKRLSYDAI+GANVDPTTFYNIGDLEIQDN+AR
Sbjct: 207 DVIRSWHIIGRLGGCNSLNMQLTESPFDKRLSYDAIQGANVDPTTFYNIGDLEIQDNLAR 266

Query: 246 IWVDIGTSESLLLDVLLNALTQISSE 272
           IWVDIGT++SL+LDVL+NALTQISS+
Sbjct: 267 IWVDIGTNDSLILDVLMNALTQISSD 292
[Close]
BLAST of Spo19958.1 vs. NCBI nr
Match: gi|728830994|gb|KHG10437.1| (dna-directed rna polymerase i subunit rpa2 [Gossypium arboreum])

HSP 1 Score: 318.9 bits (816), Expect = 8.400e-84
Identity = 157/210 (74.76%), Postives = 181/210 (86.19%), Query Frame = 1 

		  

Query: 62  MDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSC 121
           M K  R++  + S     E +D E  DD E    +  FR R +EK+YD+DPEFAEILGSC
Sbjct: 51  MLKAKRREEDISSQPFDIE-MDDEYDDDNEGYEARSGFRGREEEKNYDKDPEFAEILGSC 110

Query: 122 LDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDV 181
           LDDP+KA+SKME+RLRKKRNKILHTKTGSG+PMKVTFNKFDFSNSYIWFEFYN PL+KD+
Sbjct: 111 LDDPEKARSKMEDRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDI 170

Query: 182 SLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQD 241
           SLICD IRSWHIIGRLGGCNS+NMQLSQSP +KR SYDAI+GANV+PTTFYNIGDLE+QD
Sbjct: 171 SLICDTIRSWHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQD 230

Query: 242 NVARIWVDIGTSESLLLDVLLNALTQISSE 272
           N+ARIWVDIGT+E L+LDVL+NALTQISS+
Sbjct: 231 NLARIWVDIGTTEPLILDVLINALTQISSD 259
[Close]
BLAST of Spo19958.1 vs. NCBI nr
Match: gi|731406641|ref|XP_010656233.1| (PREDICTED: uncharacterized protein LOC100257820 [Vitis vinifera])

HSP 1 Score: 318.2 bits (814), Expect = 1.400e-83
Identity = 159/209 (76.08%), Postives = 179/209 (85.65%), Query Frame = 1 

		  

Query: 67  RQQLRVRSSESGFE-ALDVEVQDDGELDG---PQKRFRERGDEKDYDRDPEFAEILGSCL 126
           RQ+L  +S  +  E A D  V +DG+ D    P+  F  R +E DYDR+PEFAEILGSCL
Sbjct: 52  RQRLNTQSLNTEIEEAADEGVGEDGDEDDEFLPRSGFGGREEEMDYDRNPEFAEILGSCL 111

Query: 127 DDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVS 186
           DDP KA+SKMEERLR+KRNKILHTKTGS  PMKVTFNKFDFSN+YIWFEFYN PL KD+S
Sbjct: 112 DDPQKARSKMEERLRRKRNKILHTKTGSALPMKVTFNKFDFSNTYIWFEFYNTPLAKDIS 171

Query: 187 LICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDN 246
           LICD +RSWHI+GRLGGCNSLNMQLSQSPFDKR SYDAI+GANV+PTTFYNIGDLEIQDN
Sbjct: 172 LICDALRSWHIVGRLGGCNSLNMQLSQSPFDKRPSYDAIQGANVNPTTFYNIGDLEIQDN 231

Query: 247 VARIWVDIGTSESLLLDVLLNALTQISSE 272
           +ARIWVDIGTSE LLLD+L+NALTQISS+
Sbjct: 232 LARIWVDIGTSEPLLLDILINALTQISSD 260
[Close]
BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1M0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_004710 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 1.300e-155
Identity = 270/271 (99.63%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII 60
           MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII
Sbjct: 1   MSFTTSMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRII 60

Query: 61  FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS 120
           FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS
Sbjct: 61  FMDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGS 120

Query: 121 CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD 180
           CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD
Sbjct: 121 CLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKD 180

Query: 181 VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ 240
           VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ
Sbjct: 181 VSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQ 240

Query: 241 DNVARIWVDIGTSESLLLDVLLNALTQISSE 272
           DNVARIWVDIGTSESLLLDVLLNALTQISS+
Sbjct: 241 DNVARIWVDIGTSESLLLDVLLNALTQISSD 271
[Close]
BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZI6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175610 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 6.200e-118
Identity = 206/266 (77.44%), Postives = 238/266 (89.47%), Query Frame = 1 

		  

Query: 6   SMYHGGCPLEQAKTTGCLASAQLSNFILFPNLVYSNWKCSKPRFYQARNGGCRIIFMDKG 65
           +++  GCPLE AK  GCL   Q +NF L   +VYSN K SKP+  +A+N  CRI+ M++ 
Sbjct: 3   TIHQRGCPLELAKVAGCLTPIQHNNFSLLSTVVYSNRKLSKPKKCKAKNWDCRIMLMEQR 62

Query: 66  CRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDP 125
           CRQQLR + S++ +E LD E+QD+GELDGPQ+RFRER +EKDYD+DPEFAEILGSCLD+P
Sbjct: 63  CRQQLRAQYSDNQYEVLDDELQDEGELDGPQRRFREREEEKDYDKDPEFAEILGSCLDNP 122

Query: 126 DKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLIC 185
           DKAQSKMEERLRKKRNKIL TKTGSGSPMKVTFNKFD+SNSYIWFEF+NPPLQKDVSLIC
Sbjct: 123 DKAQSKMEERLRKKRNKILQTKTGSGSPMKVTFNKFDYSNSYIWFEFWNPPLQKDVSLIC 182

Query: 186 DVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVAR 245
           DVIRSWHIIGRLGGCNSLNMQL++SPFDKRLSYDAI+GANVDPTTFYNIGDLEIQDN+AR
Sbjct: 183 DVIRSWHIIGRLGGCNSLNMQLTESPFDKRLSYDAIQGANVDPTTFYNIGDLEIQDNLAR 242

Query: 246 IWVDIGTSESLLLDVLLNALTQISSE 272
           IWVDIGT++SL+LDVL+NALTQISS+
Sbjct: 243 IWVDIGTNDSLILDVLMNALTQISSD 268
[Close]
BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NCN4_GOSAR (Dna-directed rna polymerase i subunit rpa2 OS=Gossypium arboreum GN=F383_09136 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.800e-84
Identity = 157/210 (74.76%), Postives = 181/210 (86.19%), Query Frame = 1 

		  

Query: 62  MDKGCRQQLRVRSSESGFEALDVEVQDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSC 121
           M K  R++  + S     E +D E  DD E    +  FR R +EK+YD+DPEFAEILGSC
Sbjct: 51  MLKAKRREEDISSQPFDIE-MDDEYDDDNEGYEARSGFRGREEEKNYDKDPEFAEILGSC 110

Query: 122 LDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDV 181
           LDDP+KA+SKME+RLRKKRNKILHTKTGSG+PMKVTFNKFDFSNSYIWFEFYN PL+KD+
Sbjct: 111 LDDPEKARSKMEDRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDI 170

Query: 182 SLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQD 241
           SLICD IRSWHIIGRLGGCNS+NMQLSQSP +KR SYDAI+GANV+PTTFYNIGDLE+QD
Sbjct: 171 SLICDTIRSWHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQD 230

Query: 242 NVARIWVDIGTSESLLLDVLLNALTQISSE 272
           N+ARIWVDIGT+E L+LDVL+NALTQISS+
Sbjct: 231 NLARIWVDIGTTEPLILDVLINALTQISSD 259
[Close]
BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S7D3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G283500 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.900e-83
Identity = 153/203 (75.37%), Postives = 176/203 (86.70%), Query Frame = 1 

		  

Query: 73  RSSESGFEALDVEVQDDGELDGP----QKRFRERGDEKDYDRDPEFAEILGSCLDDPDKA 132
           R  +   +  D+E+ DD   D         FR R +EK+YD+DPEFAEILGSCLDDP+KA
Sbjct: 57  REEDISSQPFDIEMDDDYGDDNEGYEASSGFRGREEEKNYDKDPEFAEILGSCLDDPEKA 116

Query: 133 QSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLICDVI 192
           +SKME+RLRKKRNKILHTKTGSG+PMKVTFNKFDFSNSYIWFEFYN PL+KD+SLICD I
Sbjct: 117 RSKMEDRLRKKRNKILHTKTGSGTPMKVTFNKFDFSNSYIWFEFYNTPLEKDISLICDTI 176

Query: 193 RSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVARIWV 252
           RSWHIIGRLGGCNS+NMQLSQSP +KR SYDAI+GANV+PTTFYNIGDLE+QDN+ARIWV
Sbjct: 177 RSWHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNPTTFYNIGDLEVQDNLARIWV 236

Query: 253 DIGTSESLLLDVLLNALTQISSE 272
           DIGT+E L+LDVL+NALTQISS+
Sbjct: 237 DIGTTEPLILDVLINALTQISSD 259
[Close]
BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Match: A0A061GKX7_THECC (Ribonuclease P protein component 3 OS=Theobroma cacao GN=TCM_037715 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.400e-83
Identity = 154/201 (76.62%), Postives = 177/201 (88.06%), Query Frame = 1 

		  

Query: 73  RSSESGFEALDVEV--QDDGELDGPQKRFRERGDEKDYDRDPEFAEILGSCLDDPDKAQS 132
           RS E   + L++E+  ++D E    +  FR R +EK+YD+DPEFAEILGSCLDDP KA+S
Sbjct: 42  RSHEMSAQNLEIEMDEEEDNEEYEARSGFRGREEEKNYDKDPEFAEILGSCLDDPQKARS 101

Query: 133 KMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLICDVIRS 192
           KME+RLRKKRNKILHTKTGS +PMKVTFNKFDFSNSYIWFEFYN PL+KD+SLICD IRS
Sbjct: 102 KMEDRLRKKRNKILHTKTGSATPMKVTFNKFDFSNSYIWFEFYNAPLEKDISLICDTIRS 161

Query: 193 WHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVARIWVDI 252
           WHIIGRLGGCNS+NMQLSQSP +KR SYDAI+GANV+ TTFYNIGDLE+QDNVARIWVDI
Sbjct: 162 WHIIGRLGGCNSMNMQLSQSPLEKRPSYDAIQGANVNATTFYNIGDLEVQDNVARIWVDI 221

Query: 253 GTSESLLLDVLLNALTQISSE 272
           GT+E LLLDVL+NALTQISS+
Sbjct: 222 GTTEPLLLDVLINALTQISSD 242
[Close]
BLAST of Spo19958.1 vs. TAIR (Arabidopsis)
Match: AT4G29400.1 (Protein of unknown function (DUF3531))

HSP 1 Score: 284.6 bits (727), Expect = 6.200e-77
Identity = 142/205 (69.27%), Postives = 170/205 (82.93%), Query Frame = 1 

		  

Query: 73  RSSESGFEALD-VEVQDDGELD---GPQKR--FRERGDEKDYDRDPEFAEILGSCLDDPD 132
           R  E G E  + V+  DD E++     +KR  +R + ++ DYD+DPEFA+ILG CLD+PD
Sbjct: 65  REMEEGVEEFEEVDDGDDDEVEDEFSAKKRGVYRAKKEKIDYDKDPEFADILGDCLDNPD 124

Query: 133 KAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWFEFYNPPLQKDVSLICD 192
           KAQ KMEERLRKKRNKILHTKTGS + M VTFNKF++SNSY+W EFYN PL KD++LI D
Sbjct: 125 KAQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWLEFYNTPLDKDIALISD 184

Query: 193 VIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTTFYNIGDLEIQDNVARI 252
            IRSWHI+GRLGG NS+NMQLSQ+P DKR +YDAI GANV+PTTFYNIGDLE+QDNVARI
Sbjct: 185 TIRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTTFYNIGDLEVQDNVARI 244

Query: 253 WVDIGTSESLLLDVLLNALTQISSE 272
           W+DIGTSE L+LDVL+NALTQISS+
Sbjct: 245 WLDIGTSEPLILDVLINALTQISSD 269
[Close]
BLAST of Spo19958.1 vs. TAIR (Arabidopsis)
Match: AT5G08400.1 (Protein of unknown function (DUF3531))

HSP 1 Score: 148.7 bits (374), Expect = 5.300e-36
Identity = 73/161 (45.34%), Postives = 104/161 (64.60%), Query Frame = 1 

		  

Query: 111 DPEFAEILGSCLDDPDKAQSKMEERLRKKRNKILHTKTGSGSPMKVTFNKFDFSNSYIWF 170
           D E   +LG  + +P+  + K+EER+RKK       KTGS    KV F  F+  +S+IWF
Sbjct: 140 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWF 199

Query: 171 EFYNPPLQKDVSLICDVIRSWHIIGRLGGCNSLNMQLSQSPFDKRLSYDAIEGANVDPTT 230
           E Y  P  +DV LI  VI++W+++GRLG  N+ N+QL+ +  +    YDA +G  V P++
Sbjct: 200 ELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSS 259

Query: 231 FYNIGDLEIQDNVARIWVDIGTSESLLLDVLLNALTQISSE 272
           F++I D+E QDN  R+WVD+GTS+   LDVLLN LT +SSE
Sbjct: 260 FHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSE 300
The following BLAST results are available for this feature:
BLAST of Spo19958.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902239520|gb|KNA25636.1|1.8e-15599.6hypothetical protein SOVF_0047... [more]
gi|731349364|ref|XP_010685956.1|8.9e-11877.4PREDICTED: uncharacterized pro... [more]
gi|731349362|ref|XP_010685955.1|8.9e-11877.4PREDICTED: uncharacterized pro... [more]
gi|728830994|gb|KHG10437.1|8.4e-8474.7dna-directed rna polymerase i ... [more]
gi|731406641|ref|XP_010656233.1|1.4e-8376.0PREDICTED: uncharacterized pro... [more]
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BLAST of Spo19958.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S1M0_SPIOL1.3e-15599.6Uncharacterized protein OS=Spi... [more]
A0A0J8BZI6_BETVU6.2e-11877.4Uncharacterized protein OS=Bet... [more]
A0A0B0NCN4_GOSAR5.8e-8474.7Dna-directed rna polymerase i ... [more]
A0A0D2S7D3_GOSRA2.9e-8375.3Uncharacterized protein OS=Gos... [more]
A0A061GKX7_THECC8.4e-8376.6Ribonuclease P protein compone... [more]
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BLAST of Spo19958.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19958.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G29400.16.2e-7769.2Protein of unknown function (D... [more]
AT5G08400.15.3e-3645.3Protein of unknown function (D... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021920Protein of unknown function DUF3531PFAMPF12049DUF3531coord: 154..271
score: 7.8
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 58..270
score: 1.8E
NoneNo IPR availablePANTHERPTHR33102:SF2SUBFAMILY NOT NAMEDcoord: 58..270
score: 1.8E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009657 plastid organization
biological_process GO:0007015 actin filament organization
biological_process GO:0032880 regulation of protein localization
biological_process GO:0010119 regulation of stomatal movement
biological_process GO:0051301 cell division
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006479 protein methylation
biological_process GO:0010628 positive regulation of gene expression
biological_process GO:0009058 biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0001510 RNA methylation
biological_process GO:0015721 bile acid and bile salt transport
biological_process GO:0035725 sodium ion transmembrane transport
biological_process GO:0016070 RNA metabolic process
biological_process GO:0032502 developmental process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0046686 response to cadmium ion
biological_process GO:0000373 Group II intron splicing
biological_process GO:0000372 Group I intron splicing
biological_process GO:0032365 intracellular lipid transport
biological_process GO:0090617 mitochondrial mRNA 5'-end processing
biological_process GO:0006606 protein import into nucleus
biological_process GO:0009987 cellular process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0030154 cell differentiation
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0006281 DNA repair
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0044238 primary metabolic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0048481 plant ovule development
biological_process GO:0006450 regulation of translational fidelity
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0018160 peptidyl-pyrromethane cofactor linkage
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0015031 protein transport
biological_process GO:0042450 arginine biosynthetic process via ornithine
biological_process GO:0006560 proline metabolic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0008610 lipid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006429 leucyl-tRNA aminoacylation
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0006334 nucleosome assembly
biological_process GO:0015684 ferrous iron transport
biological_process GO:0009157 deoxyribonucleoside monophosphate biosynthetic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0006950 response to stress
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0016075 rRNA catabolic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0009451 RNA modification
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0048366 leaf development
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0006486 protein glycosylation
biological_process GO:0009156 ribonucleoside monophosphate biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0016556 mRNA modification
biological_process GO:0010275 NAD(P)H dehydrogenase complex assembly
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0000741 karyogamy
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009642 response to light intensity
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006364 rRNA processing
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0006265 DNA topological change
biological_process GO:0006897 endocytosis
biological_process GO:0010468 regulation of gene expression
biological_process GO:0070475 rRNA base methylation
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0030488 tRNA methylation
biological_process GO:0030150 protein import into mitochondrial matrix
biological_process GO:0090351 seedling development
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0044208 'de novo' AMP biosynthetic process
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0042793 plastid transcription
biological_process GO:0009658 chloroplast organization
biological_process GO:0007018 microtubule-based movement
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0042545 cell wall modification
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0019748 secondary metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0009902 chloroplast relocation
biological_process GO:0051607 defense response to virus
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0051604 protein maturation
biological_process GO:0006508 proteolysis
biological_process GO:0035304 regulation of protein dephosphorylation
cellular_component GO:0005730 nucleolus
cellular_component GO:0019031 viral envelope
cellular_component GO:0000785 chromatin
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009295 nucleoid
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0034457 Mpp10 complex
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0009513 etioplast
cellular_component GO:0009508 plastid chromosome
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005732 small nucleolar ribonucleoprotein complex
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005694 chromosome
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009501 amyloplast
cellular_component GO:0009509 chromoplast
cellular_component GO:0009537 proplastid
cellular_component GO:0042646 plastid nucleoid
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005768 endosome
cellular_component GO:0005874 microtubule
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005871 kinesin complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0048046 apoplast
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005887 integral component of plasma membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
molecular_function GO:0004056 argininosuccinate lyase activity
molecular_function GO:0017111 nucleoside-triphosphatase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0004749 ribose phosphate diphosphokinase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0004418 hydroxymethylbilane synthase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0002161 aminoacyl-tRNA editing activity
molecular_function GO:0004823 leucine-tRNA ligase activity
molecular_function GO:0005543 phospholipid binding
molecular_function GO:0005319 lipid transporter activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0003677 DNA binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008276 protein methyltransferase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008508 bile acid:sodium symporter activity
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
molecular_function GO:0003779 actin binding
molecular_function GO:0070626 (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0016987 sigma factor activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0015093 ferrous iron transmembrane transporter activity
molecular_function GO:0003917 DNA topoisomerase type I activity
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0019136 deoxynucleoside kinase activity
molecular_function GO:0043022 ribosome binding
molecular_function GO:0016491 oxidoreductase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo208890.81Barchart | Table
Spo239330.80Barchart | Table
Spo266710.78Barchart | Table
Spo150250.78Barchart | Table
Spo206990.77Barchart | Table
Spo210740.76Barchart | Table
Spo144830.76Barchart | Table
Spo039720.75Barchart | Table
Spo157930.75Barchart | Table
Spo127780.75Barchart | Table
Spo169040.75Barchart | Table
Spo106230.75Barchart | Table
Spo009210.75Barchart | Table
Spo029640.75Barchart | Table
Spo049950.74Barchart | Table
Spo211360.74Barchart | Table
Spo241530.74Barchart | Table
Spo224560.74Barchart | Table
Spo112210.74Barchart | Table
Spo100090.73Barchart | Table
Spo155520.73Barchart | Table
Spo240490.73Barchart | Table
Spo081650.73Barchart | Table
Spo090940.73Barchart | Table
Spo258460.72Barchart | Table
Spo165630.72Barchart | Table
Spo240540.72Barchart | Table
Spo075380.72Barchart | Table
Spo253950.72Barchart | Table
Spo112690.72Barchart | Table
Spo016150.72Barchart | Table
Spo127640.72Barchart | Table
Spo020150.72Barchart | Table
Spo143100.72Barchart | Table
Spo173670.71Barchart | Table
Spo020010.71Barchart | Table
Spo151220.71Barchart | Table
Spo185980.71Barchart | Table
Spo067750.71Barchart | Table
Spo247500.71Barchart | Table
Spo006850.71Barchart | Table
Spo009040.71Barchart | Table
Spo208060.71Barchart | Table
Spo088790.71Barchart | Table
Spo188600.71Barchart | Table
Spo184780.71Barchart | Table
Spo257730.71Barchart | Table
Spo181500.70Barchart | Table
Spo133740.70Barchart | Table
Spo114450.70Barchart | Table
Spo087290.70Barchart | Table
Spo158410.70Barchart | Table
Spo024400.70Barchart | Table
Spo226050.70Barchart | Table
Spo030570.69Barchart | Table
Spo022140.69Barchart | Table
Spo000270.69Barchart | Table
Spo046220.69Barchart | Table
Spo076440.69Barchart | Table
Spo089030.69Barchart | Table
Spo118300.69Barchart | Table
Spo128220.69Barchart | Table
Spo151350.69Barchart | Table
Spo182960.69Barchart | Table
Spo184790.69Barchart | Table
Spo259130.69Barchart | Table
Spo272910.69Barchart | Table
Spo154820.68Barchart | Table
Spo045800.68Barchart | Table
Spo267270.68Barchart | Table
Spo266730.68Barchart | Table
Spo164100.68Barchart | Table
Spo094410.68Barchart | Table
Spo156370.68Barchart | Table
Spo038350.68Barchart | Table
Spo148570.68Barchart | Table
Spo261950.67Barchart | Table
Spo119450.67Barchart | Table
Spo158780.67Barchart | Table
Spo107440.67Barchart | Table
Spo106190.67Barchart | Table
Spo183980.67Barchart | Table
Spo189080.67Barchart | Table
Spo206650.67Barchart | Table
Spo086250.67Barchart | Table
Spo207720.67Barchart | Table
Spo070650.67Barchart | Table
Spo231270.67Barchart | Table
Spo239780.67Barchart | Table
Spo034760.67Barchart | Table
Spo018310.67Barchart | Table
Spo149990.67Barchart | Table
Spo209580.66Barchart | Table
Spo072930.66Barchart | Table
Spo092820.66Barchart | Table
Spo090270.66Barchart | Table
Spo161360.66Barchart | Table
Spo008850.66Barchart | Table
Spo267750.66Barchart | Table
Spo083120.66Barchart | Table
Spo055100.66Barchart | Table
Spo148480.66Barchart | Table
Spo149410.66Barchart | Table
Spo044380.66Barchart | Table
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Spo266440.65Barchart | Table
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Spo085330.65Barchart | Table
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