Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATCTAAAAAGAGAGGAATAATTTCTTTTGAGACCACCATGCTTTTTCTACCATCTTTAAGCCAGCCAAAACTAGCTTTTTAAGGGTTATATGCTATGCTACTATCTCATCTCCAAAAACTAGTCAAACTCAAAAACAACTTGCAAACCTACTCTCTGCTTTTCTCTGCATTAATTTGCATTCACAAAACAACTAAACAAGCTTAGCCGAATTAGAAGAAATGGGCTTCTTTGATCATATGTTGGACTGTTGTGACGCTTCTATCCCCAAGCATAAGAAACGTAAGCCAATGCAGGTGACCCTTCTCATTTTTATTTTATTTTATTTTATTTTATCATATCAATGTTCCTAATTATAATTTCTTCTTCATCTTTTATTTGTTGTCTGATTTCTCTAGCTATTTGATGTTACTTACCTATTGTTTTTATATCTGAGAAGTCATAGTAATGGTATCACATATTAACAGAGGTAACTGGGAGTACAAGTACATTACTTATATTGTCTATAGAGTCTGACAATCCATGTGTCATAGTAATTGAACTAAGTTTTGTTTTCATTGATCAACAGACTGTTGAGATTAAGGTGAAAATGGACTGTGATGGTTGTGAAAGAAGAGTTAGGAACTCTGTCATCCATATCAAAGGTAAAACACTTACTGTTCACTAATTTCATTCTTCCATTTTTCTTTTCTGAATTTCTCTCATGTACGTACCACAAAATATCAGAAATTTTGATGTACACATTTTATAATTTGTCCCAAAAGTTGCTAAATTATAAGTAGTGATTCTTGAGAATTTTTATTATAAATAAGAGAAAGAGAACAAGTATATAAGCACATTCCGAGTCAGATAGTTTGTAATTTACAAGTCTTTTAAAGTGCTTTTTTTTTTGGCATACTTTACATTACCATAACTTTAAATTTAAATGTAATAATATGTGTGTATATGCTGATATACATATAGGAGTGAAATCCGTGGACGTGAATCGTAAGCTGAGTAAAGTAACGGTGACCGGAAACATAGAGCCAAATAGAGTGTTAAACAGAGTGAAGAGCACAGGGAAGAGAGCAGAGTTTTGGCCATATGTTCCATTCAATGTGGTGTCTTACCCTTATGTTGCTCAAGCCTACGACAAGAAAGCACCTTCTGGCTATGTCAAGAATGCACCTCAAGCTTATGCTGGTCCCACTGATGGACCTCACGAAAAATACACTCAAATATTTAGTGACGATAACCCTAATGCTTCTTGTTCTATCATGTAATCAATCGCCCATTGTATTGGGGTTATTATTAATTTATCACTTAGATTTTTGACACTATATATATGAGGACCGATCATTTAATAAATAATGTTTCTTACACATTTTGC GTATCTAAAAAGAGAGGAATAATTTCTTTTGAGACCACCATGCTTTTTCTACCATCTTTAAGCCAGCCAAAACTAGCTTTTTAAGGGTTATATGCTATGCTACTATCTCATCTCCAAAAACTAGTCAAACTCAAAAACAACTTGCAAACCTACTCTCTGCTTTTCTCTGCATTAATTTGCATTCACAAAACAACTAAACAAGCTTAGCCGAATTAGAAGAAATGGGCTTCTTTGATCATATGTTGGACTGTTGTGACGCTTCTATCCCCAAGCATAAGAAACGTAAGCCAATGCAGACTGTTGAGATTAAGGTGAAAATGGACTGTGATGGTTGTGAAAGAAGAGTTAGGAACTCTGTCATCCATATCAAAGGAGTGAAATCCGTGGACGTGAATCGTAAGCTGAGTAAAGTAACGGTGACCGGAAACATAGAGCCAAATAGAGTGTTAAACAGAGTGAAGAGCACAGGGAAGAGAGCAGAGTTTTGGCCATATGTTCCATTCAATGTGGTGTCTTACCCTTATGTTGCTCAAGCCTACGACAAGAAAGCACCTTCTGGCTATGTCAAGAATGCACCTCAAGCTTATGCTGGTCCCACTGATGGACCTCACGAAAAATACACTCAAATATTTAGTGACGATAACCCTAATGCTTCTTGTTCTATCATGTAATCAATCGCCCATTGTATTGGGGTTATTATTAATTTATCACTTAGATTTTTGACACTATATATATGAGGACCGATCATTTAATAAATAATGTTTCTTACACATTTTGC ATGGGCTTCTTTGATCATATGTTGGACTGTTGTGACGCTTCTATCCCCAAGCATAAGAAACGTAAGCCAATGCAGACTGTTGAGATTAAGGTGAAAATGGACTGTGATGGTTGTGAAAGAAGAGTTAGGAACTCTGTCATCCATATCAAAGGAGTGAAATCCGTGGACGTGAATCGTAAGCTGAGTAAAGTAACGGTGACCGGAAACATAGAGCCAAATAGAGTGTTAAACAGAGTGAAGAGCACAGGGAAGAGAGCAGAGTTTTGGCCATATGTTCCATTCAATGTGGTGTCTTACCCTTATGTTGCTCAAGCCTACGACAAGAAAGCACCTTCTGGCTATGTCAAGAATGCACCTCAAGCTTATGCTGGTCCCACTGATGGACCTCACGAAAAATACACTCAAATATTTAGTGACGATAACCCTAATGCTTCTTGTTCTATCATGTAA MGFFDHMLDCCDASIPKHKKRKPMQTVEIKVKMDCDGCERRVRNSVIHIKGVKSVDVNRKLSKVTVTGNIEPNRVLNRVKSTGKRAEFWPYVPFNVVSYPYVAQAYDKKAPSGYVKNAPQAYAGPTDGPHEKYTQIFSDDNPNASCSIM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19664.1 vs. NCBI nr
Match: gi|902083451|gb|KNA03174.1| (hypothetical protein SOVF_211740 isoform B, partial [Spinacia oleracea]) HSP 1 Score: 311.6 bits (797), Expect = 7.400e-82 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of Spo19664.1 vs. NCBI nr
Match: gi|731320231|ref|XP_010670695.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 260.0 bits (663), Expect = 2.500e-66 Identity = 122/149 (81.88%), Postives = 133/149 (89.26%), Query Frame = 1
BLAST of Spo19664.1 vs. NCBI nr
Match: gi|902083450|gb|KNA03173.1| (hypothetical protein SOVF_211740 isoform A, partial [Spinacia oleracea]) HSP 1 Score: 242.7 bits (618), Expect = 4.200e-61 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Spo19664.1 vs. NCBI nr
Match: gi|976920683|gb|KVI05397.1| (hypothetical protein Ccrd_016254 [Cynara cardunculus var. scolymus]) HSP 1 Score: 213.4 bits (542), Expect = 2.700e-52 Identity = 100/149 (67.11%), Postives = 119/149 (79.87%), Query Frame = 1
BLAST of Spo19664.1 vs. NCBI nr
Match: gi|1012335628|gb|KYP46952.1| (hypothetical protein KK1_031434 [Cajanus cajan]) HSP 1 Score: 212.6 bits (540), Expect = 4.700e-52 Identity = 106/149 (71.14%), Postives = 122/149 (81.88%), Query Frame = 1
BLAST of Spo19664.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7H7_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_211740 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 5.100e-82 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of Spo19664.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXJ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043150 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 1.800e-66 Identity = 122/149 (81.88%), Postives = 133/149 (89.26%), Query Frame = 1
BLAST of Spo19664.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q913_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_211740 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 2.900e-61 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Spo19664.1 vs. UniProtKB/TrEMBL
Match: A0A103YA96_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016254 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.900e-52 Identity = 100/149 (67.11%), Postives = 119/149 (79.87%), Query Frame = 1
BLAST of Spo19664.1 vs. UniProtKB/TrEMBL
Match: A0A151RWM9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_031434 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 3.200e-52 Identity = 106/149 (71.14%), Postives = 122/149 (81.88%), Query Frame = 1
BLAST of Spo19664.1 vs. ExPASy Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 1.900e-45 Identity = 88/151 (58.28%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Spo19664.1 vs. ExPASy Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.300e-41 Identity = 81/134 (60.45%), Postives = 104/134 (77.61%), Query Frame = 1
BLAST of Spo19664.1 vs. ExPASy Swiss-Prot
Match: HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN=HIPP22 PE=2 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.200e-39 Identity = 81/137 (59.12%), Postives = 106/137 (77.37%), Query Frame = 1
BLAST of Spo19664.1 vs. ExPASy Swiss-Prot
Match: HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 6.700e-35 Identity = 79/154 (51.30%), Postives = 102/154 (66.23%), Query Frame = 1
BLAST of Spo19664.1 vs. ExPASy Swiss-Prot
Match: HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN=HIPP27 PE=1 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.000e-34 Identity = 81/140 (57.86%), Postives = 96/140 (68.57%), Query Frame = 1
BLAST of Spo19664.1 vs. TAIR (Arabidopsis)
Match: AT5G17450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 183.3 bits (464), Expect = 1.100e-46 Identity = 88/151 (58.28%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Spo19664.1 vs. TAIR (Arabidopsis)
Match: AT1G71050.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 170.6 bits (431), Expect = 7.100e-43 Identity = 81/134 (60.45%), Postives = 104/134 (77.61%), Query Frame = 1
BLAST of Spo19664.1 vs. TAIR (Arabidopsis)
Match: AT1G22990.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 164.1 bits (414), Expect = 6.700e-41 Identity = 81/137 (59.12%), Postives = 106/137 (77.37%), Query Frame = 1
BLAST of Spo19664.1 vs. TAIR (Arabidopsis)
Match: AT4G39700.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 156.4 bits (394), Expect = 1.400e-38 Identity = 78/141 (55.32%), Postives = 103/141 (73.05%), Query Frame = 1
BLAST of Spo19664.1 vs. TAIR (Arabidopsis)
Match: AT4G38580.1 (farnesylated protein 6) HSP 1 Score: 148.3 bits (373), Expect = 3.800e-36 Identity = 79/154 (51.30%), Postives = 102/154 (66.23%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19664.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19664.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19664.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19664.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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