Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCACCAGAAAACCCCAAATCAATTGGGCGGTGACGCAAAACCCAGCCACTCAACCCTTGCAGCGCCGGCGTAATCGCTTATACCCTCACCGTCGACCACCGGCCTGCTCTTTCATCTCTGTTCGTCAGCGGGACCAGCACCTCAGCCAGCCACCAGCACGAAGCTGAGTAACCACGAAGCATCCCACGCAACACTTGCGTGATCCCGCGCGCTTTCCTTGCTTGTGCAGCCTTGCTCGACAACCCAGAACCTCTCGCCCTCCCTCGCAGCAGGCCACATACGCCAAAACTACCGCCGCAACACTTGCTTACCCGTTTCTCCCACTCGATTCGTGCAACAATTTGCGTGGATTTGGTAAGATTTCAAGCAACAATTTAATTGAATTTGGGGGTGTGTAATTTTCATAAAATTAGGGTTCGTAGAAGAATTGCGCATAAAACGATTTTGTGCCCTATTTATCACTGTTTTTGGCATAAATTAGGTAAGAAATCGAAATTAAATTAGATAAATAATCAGATTATTTACCTAAAAGTTCGAAGTGTTATAGGCAATTTTCGGATTTGTATATACACAAAATCAAATATTTTCAACGTGTTATAAATTTATAAAATTAATCATATACTAGTTGCATAAATTTAAATATTTAAATCGAAAAATTTGGGATAATTTAAGCATAAAATCAGATTTTATTGTGAAGCTTTCGGGTACGACTGTTGGTTTATACGAGCATACAAGTGTATAGAATCAATATTTTATACAGTAAAACCAGAATCAATATTTTAATTTTGCATATTAATTCATGAAACTTGTAGCATGTAAAGGTTGAGTGAGAGACAATATGGGAAAAGATTCAAAGAACAACAGACAACCTTCTCACTTGCTCTTAAAAGATCAAGCAAAGAATCGGATTGAGGATCTTCAGTCAGTGATCAATGAAATTCAGGTTGCCAGGAAGGAGAGTCGGGCTGGTGACGTTGTTACACTGGAAGAGCAAGTTAACCAAATACTTCGTGAATGGAAAGATGATCTTGAAAAATCAACCCCAGCTTCTTCGTTGAATGTGCGTACTCAATCTGTATCATTTTCTTTTGCTGTTTCTTATCTGCACCGCTTAAGAATGAATATAAAATTTCATATGCTATGCAGGAAGACAGTCTTGGGTCATTTTCTAAAGAACTTGGTCAGCTGTTGCAGCAGTTTGATGTAGAAGATGATGCAACAAGTCCATTAACAGTACCACATAACATGAGGCATGGTGATGCCACCGGCGCTTTTGCGGTGTCAAACTCTGGAAGAGACGAAGAGGTTTACTTTCCTCTTGCCAATGTTGAAATAAGAAAATAGAATAAATTGGAAAAAAGAAAAGAAGCCATTGTTTAGGATCCACCTTTTAAAGTTCAGATTGGTTTGATGTACTTTAACATGCCGAAATCGCAACCCCCCTTTCCCAATCTATTTTTAAAAATGTTCAGGCCAAATATTTGGTGAACTCTTCAGGATTAGGTTCATTCAATTTAAACACTCCAAGAACATGCAATGGCCTTTCCCATTATATTCTGGAAGAGTACTTAGTAATGTTTATTCAATTTCATAGACCATCAGAAATCACCATTTGCTGCATTGCAATTATATGCGAAGTATGTATTCTTCATGACATGACTCTAATTCTTGTGTTTTTACAGGTCTGCTACTTGAATTTTACACCTCAGCAACAAAATTTTCAAGGTTTTCAGGATCATACACCTCAGCAGCATGAATTCCAAGGTTTTCAGAGTCATATACCACAACATGAGTTTCCTGGCTTTGACAGTCATCCACCTCAGCATCATGAACTTCCAGGTTTTGAGAATCATAAGCCAGAGTCTCAGGACTATCAAGGTTTTGAGAATTGCAATGGTGTTGCGACTACTGTGCAAGGTAGTATGATCAATAACTTTGAACCTTCAGATGTACACAACATGGTGCCTAATAACTTTAGTATGATGACTCAACTGGATTTCCTCCCCTTGGATGAACACCAGAACCTTGACAGTGAGATATTTATCAGTTCGAGTGGTATTGAGAATTGGGGAATGGATGTATTTTCTGATTTCTCGTCAAATGTCAACCCTCCACCATCCGCATTCTTAGGACCAAAATGCGCCCTATGGGATTGTGTAAGACCTGCTAAGTCAACAGAAATTTGTAGAAACTATTGCAGTGGATTTCATGCGGAGTTAGCAGTAAAGGAATGCCCTCCAGGAAGTTGTCCTATTCTGAGGCCTGGAGGTATTGGTTTGAAAGATGGTCCACTTTTTGTAGCACTCAAGTCAAAGCTGGAGGGAAAAGATGTGGGCATCCCAGAATGTCTTGGTGCTGCTTCTGCAAAATCTCCATGGAATACTCCTGGTAAGCATATTATAGTGATTAAGAAGATGTTGAGAATATGAATATAGGATATTGTTAATTTATATTATGATATGATTGTTGGTCTTTTAATTTGGGGTTGCAGAACTATTTGATATTTCCATATCAGAAGGTGAAAAGATAAGGGAATGGCTGTTTTTTGATAAACCTAGAAAAGCATTTGAGACTGGAAACAGAAAGCAGAGGTCGTTGCCAGACCATGAGGGGCGTGGTTGGCATGAGTCAAGGAAGCAAAATGCAAATGAATATAATGGGCAGAAGAGGTCTTACTATGCTGATCCCCAGCCACAAAAGGAGTTAGAATGGCATTTGTTTGAGTACGAGATTAATAAGTGTAATACAATTGCATTGTACCGTTTAGAACTAAAAGTAGCAGAGGAGAAGAAGAGTCCAAAGACAAAAGTAACAACAAATGATCCCCTTGGTGATCTACAAAAGCAGATGGGTAGGCTTACAGCTCAAGGATCGGCTGAGAACAAGCGCTCTGGGAAGGGCAAGGCAAAGGTCAATGTGAACTCAGACCATGGAAATGGAAATGGAAATGGAAATGGAAAAGGTGAAAGACATTTCACTGACAATGAGTGAAGGACTATTGAAAGGATATACTACTTGGTATTATCTTAAATATTAACGAATTTACTGACACTATTGTAATTTTTATCAATATAGAGATAGAGATGTAGTTAGGACTAAGCAGCATCTTGTGCCTTTTATCTCCCTTGGTTTTGTTGGTATCATTTTTGTACATTGCTTTCGTCCATTTACTCGGGGTACCGGCCAGGTTGTCTTTTTGGTGTGAAATATGAAATATCTCTTCTTACAATGTGTGATACACCGCCCGCTGCCTTGCCCCTCTCTAGCTATAAGTCTTTAACCCGGTTATTGAGGTCACTCTGCCATCATATATCATTATAGTAATACATTAATACTCATTCGTGGCGTGGCATACATCTTTCAGGAATAATTCCCAACTGCTAAACAAACTAACCCCGTCCATAGTTCCATGCTGTTCCTTAATGTATATATTAC CAGCACCAGAAAACCCCAAATCAATTGGGCGGTGACGCAAAACCCAGCCACTCAACCCTTGCAGCGCCGGCGTAATCGCTTATACCCTCACCGTCGACCACCGGCCTGCTCTTTCATCTCTGTTCGTCAGCGGGACCAGCACCTCAGCCAGCCACCAGCACGAAGCTGAGTAACCACGAAGCATCCCACGCAACACTTGCGTGATCCCGCGCGCTTTCCTTGCTTGTGCAGCCTTGCTCGACAACCCAGAACCTCTCGCCCTCCCTCGCAGCAGGCCACATACGCCAAAACTACCGCCGCAACACTTGCTTACCCGTTTCTCCCACTCGATTCGTGCAACAATTTGCGTGGATTTGCATGTAAAGGTTGAGTGAGAGACAATATGGGAAAAGATTCAAAGAACAACAGACAACCTTCTCACTTGCTCTTAAAAGATCAAGCAAAGAATCGGATTGAGGATCTTCAGTCAGTGATCAATGAAATTCAGGTTGCCAGGAAGGAGAGTCGGGCTGGTGACGTTGTTACACTGGAAGAGCAAGTTAACCAAATACTTCGTGAATGGAAAGATGATCTTGAAAAATCAACCCCAGCTTCTTCGTTGAATGAAGACAGTCTTGGGTCATTTTCTAAAGAACTTGGTCAGCTGTTGCAGCAGTTTGATGTAGAAGATGATGCAACAAGTCCATTAACAGTACCACATAACATGAGGCATGGTGATGCCACCGGCGCTTTTGCGGTGTCAAACTCTGGAAGAGACGAAGAGGTCTGCTACTTGAATTTTACACCTCAGCAACAAAATTTTCAAGGTTTTCAGGATCATACACCTCAGCAGCATGAATTCCAAGGTTTTCAGAGTCATATACCACAACATGAGTTTCCTGGCTTTGACAGTCATCCACCTCAGCATCATGAACTTCCAGGTTTTGAGAATCATAAGCCAGAGTCTCAGGACTATCAAGGTTTTGAGAATTGCAATGGTGTTGCGACTACTGTGCAAGGTAGTATGATCAATAACTTTGAACCTTCAGATGTACACAACATGGTGCCTAATAACTTTAGTATGATGACTCAACTGGATTTCCTCCCCTTGGATGAACACCAGAACCTTGACAGTGAGATATTTATCAGTTCGAGTGGTATTGAGAATTGGGGAATGGATGTATTTTCTGATTTCTCGTCAAATGTCAACCCTCCACCATCCGCATTCTTAGGACCAAAATGCGCCCTATGGGATTGTGTAAGACCTGCTAAGTCAACAGAAATTTGTAGAAACTATTGCAGTGGATTTCATGCGGAGTTAGCAGTAAAGGAATGCCCTCCAGGAAGTTGTCCTATTCTGAGGCCTGGAGGTATTGGTTTGAAAGATGGTCCACTTTTTGTAGCACTCAAGTCAAAGCTGGAGGGAAAAGATGTGGGCATCCCAGAATGTCTTGGTGCTGCTTCTGCAAAATCTCCATGGAATACTCCTGAACTATTTGATATTTCCATATCAGAAGGTGAAAAGATAAGGGAATGGCTGTTTTTTGATAAACCTAGAAAAGCATTTGAGACTGGAAACAGAAAGCAGAGGTCGTTGCCAGACCATGAGGGGCGTGGTTGGCATGAGTCAAGGAAGCAAAATGCAAATGAATATAATGGGCAGAAGAGGTCTTACTATGCTGATCCCCAGCCACAAAAGGAGTTAGAATGGCATTTGTTTGAGTACGAGATTAATAAGTGTAATACAATTGCATTGTACCGTTTAGAACTAAAAGTAGCAGAGGAGAAGAAGAGTCCAAAGACAAAAGTAACAACAAATGATCCCCTTGGTGATCTACAAAAGCAGATGGGTAGGCTTACAGCTCAAGGATCGGCTGAGAACAAGCGCTCTGGGAAGGGCAAGGCAAAGGTCAATGTGAACTCAGACCATGGAAATGGAAATGGAAATGGAAATGGAAAAGGTGAAAGACATTTCACTGACAATGAGTGAAGGACTATTGAAAGGATATACTACTTGGTATTATCTTAAATATTAACGAATTTACTGACACTATTGTAATTTTTATCAATATAGAGATAGAGATGTAGTTAGGACTAAGCAGCATCTTGTGCCTTTTATCTCCCTTGGTTTTGTTGGTATCATTTTTGTACATTGCTTTCGTCCATTTACTCGGGGTACCGGCCAGGTTGTCTTTTTGGTGTGAAATATGAAATATCTCTTCTTACAATGTGTGATACACCGCCCGCTGCCTTGCCCCTCTCTAGCTATAAGTCTTTAACCCGGTTATTGAGGTCACTCTGCCATCATATATCATTATAGTAATACATTAATACTCATTCGTGGCGTGGCATACATCTTTCAGGAATAATTCCCAACTGCTAAACAAACTAACCCCGTCCATAGTTCCATGCTGTTCCTTAATGTATATATTAC ATGGGAAAAGATTCAAAGAACAACAGACAACCTTCTCACTTGCTCTTAAAAGATCAAGCAAAGAATCGGATTGAGGATCTTCAGTCAGTGATCAATGAAATTCAGGTTGCCAGGAAGGAGAGTCGGGCTGGTGACGTTGTTACACTGGAAGAGCAAGTTAACCAAATACTTCGTGAATGGAAAGATGATCTTGAAAAATCAACCCCAGCTTCTTCGTTGAATGAAGACAGTCTTGGGTCATTTTCTAAAGAACTTGGTCAGCTGTTGCAGCAGTTTGATGTAGAAGATGATGCAACAAGTCCATTAACAGTACCACATAACATGAGGCATGGTGATGCCACCGGCGCTTTTGCGGTGTCAAACTCTGGAAGAGACGAAGAGGTCTGCTACTTGAATTTTACACCTCAGCAACAAAATTTTCAAGGTTTTCAGGATCATACACCTCAGCAGCATGAATTCCAAGGTTTTCAGAGTCATATACCACAACATGAGTTTCCTGGCTTTGACAGTCATCCACCTCAGCATCATGAACTTCCAGGTTTTGAGAATCATAAGCCAGAGTCTCAGGACTATCAAGGTTTTGAGAATTGCAATGGTGTTGCGACTACTGTGCAAGGTAGTATGATCAATAACTTTGAACCTTCAGATGTACACAACATGGTGCCTAATAACTTTAGTATGATGACTCAACTGGATTTCCTCCCCTTGGATGAACACCAGAACCTTGACAGTGAGATATTTATCAGTTCGAGTGGTATTGAGAATTGGGGAATGGATGTATTTTCTGATTTCTCGTCAAATGTCAACCCTCCACCATCCGCATTCTTAGGACCAAAATGCGCCCTATGGGATTGTGTAAGACCTGCTAAGTCAACAGAAATTTGTAGAAACTATTGCAGTGGATTTCATGCGGAGTTAGCAGTAAAGGAATGCCCTCCAGGAAGTTGTCCTATTCTGAGGCCTGGAGGTATTGGTTTGAAAGATGGTCCACTTTTTGTAGCACTCAAGTCAAAGCTGGAGGGAAAAGATGTGGGCATCCCAGAATGTCTTGGTGCTGCTTCTGCAAAATCTCCATGGAATACTCCTGAACTATTTGATATTTCCATATCAGAAGGTGAAAAGATAAGGGAATGGCTGTTTTTTGATAAACCTAGAAAAGCATTTGAGACTGGAAACAGAAAGCAGAGGTCGTTGCCAGACCATGAGGGGCGTGGTTGGCATGAGTCAAGGAAGCAAAATGCAAATGAATATAATGGGCAGAAGAGGTCTTACTATGCTGATCCCCAGCCACAAAAGGAGTTAGAATGGCATTTGTTTGAGTACGAGATTAATAAGTGTAATACAATTGCATTGTACCGTTTAGAACTAAAAGTAGCAGAGGAGAAGAAGAGTCCAAAGACAAAAGTAACAACAAATGATCCCCTTGGTGATCTACAAAAGCAGATGGGTAGGCTTACAGCTCAAGGATCGGCTGAGAACAAGCGCTCTGGGAAGGGCAAGGCAAAGGTCAATGTGAACTCAGACCATGGAAATGGAAATGGAAATGGAAATGGAAAAGGTGAAAGACATTTCACTGACAATGAGTGA MGKDSKNNRQPSHLLLKDQAKNRIEDLQSVINEIQVARKESRAGDVVTLEEQVNQILREWKDDLEKSTPASSLNEDSLGSFSKELGQLLQQFDVEDDATSPLTVPHNMRHGDATGAFAVSNSGRDEEVCYLNFTPQQQNFQGFQDHTPQQHEFQGFQSHIPQHEFPGFDSHPPQHHELPGFENHKPESQDYQGFENCNGVATTVQGSMINNFEPSDVHNMVPNNFSMMTQLDFLPLDEHQNLDSEIFISSSGIENWGMDVFSDFSSNVNPPPSAFLGPKCALWDCVRPAKSTEICRNYCSGFHAELAVKECPPGSCPILRPGGIGLKDGPLFVALKSKLEGKDVGIPECLGAASAKSPWNTPELFDISISEGEKIREWLFFDKPRKAFETGNRKQRSLPDHEGRGWHESRKQNANEYNGQKRSYYADPQPQKELEWHLFEYEINKCNTIALYRLELKVAEEKKSPKTKVTTNDPLGDLQKQMGRLTAQGSAENKRSGKGKAKVNVNSDHGNGNGNGNGKGERHFTDNE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19616.1 vs. NCBI nr
Match: gi|902236858|gb|KNA24564.1| (hypothetical protein SOVF_014540 [Spinacia oleracea]) HSP 1 Score: 1063.5 bits (2749), Expect = 1.200e-307 Identity = 526/528 (99.62%), Postives = 526/528 (99.62%), Query Frame = 1
BLAST of Spo19616.1 vs. NCBI nr
Match: gi|731356600|ref|XP_010689762.1| (PREDICTED: transcription factor VOZ1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 768.8 bits (1984), Expect = 6.000e-219 Identity = 398/555 (71.71%), Postives = 456/555 (82.16%), Query Frame = 1
BLAST of Spo19616.1 vs. NCBI nr
Match: gi|920687604|gb|KOM31587.1| (hypothetical protein LR48_Vigan01g114200 [Vigna angularis]) HSP 1 Score: 430.3 bits (1105), Expect = 5.000e-117 Identity = 255/524 (48.66%), Postives = 317/524 (60.50%), Query Frame = 1
BLAST of Spo19616.1 vs. NCBI nr
Match: gi|224079155|ref|XP_002305772.1| (hypothetical protein POPTR_0004s05030g [Populus trichocarpa]) HSP 1 Score: 424.5 bits (1090), Expect = 2.800e-115 Identity = 253/517 (48.94%), Postives = 309/517 (59.77%), Query Frame = 1
BLAST of Spo19616.1 vs. NCBI nr
Match: gi|720014037|ref|XP_010260370.1| (PREDICTED: transcription factor VOZ1 [Nelumbo nucifera]) HSP 1 Score: 417.5 bits (1072), Expect = 3.400e-113 Identity = 247/517 (47.78%), Postives = 300/517 (58.03%), Query Frame = 1
BLAST of Spo19616.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S044_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_014540 PE=4 SV=1) HSP 1 Score: 1063.5 bits (2749), Expect = 8.200e-308 Identity = 526/528 (99.62%), Postives = 526/528 (99.62%), Query Frame = 1
BLAST of Spo19616.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPM7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g209290 PE=4 SV=1) HSP 1 Score: 768.8 bits (1984), Expect = 4.200e-219 Identity = 398/555 (71.71%), Postives = 456/555 (82.16%), Query Frame = 1
BLAST of Spo19616.1 vs. UniProtKB/TrEMBL
Match: A0A0L9TMC5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g114200 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 3.500e-117 Identity = 255/524 (48.66%), Postives = 317/524 (60.50%), Query Frame = 1
BLAST of Spo19616.1 vs. UniProtKB/TrEMBL
Match: B9H2N9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s05030g PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 1.900e-115 Identity = 253/517 (48.94%), Postives = 309/517 (59.77%), Query Frame = 1
BLAST of Spo19616.1 vs. UniProtKB/TrEMBL
Match: F6H4X2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02670 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 1.300e-108 Identity = 239/506 (47.23%), Postives = 295/506 (58.30%), Query Frame = 1
BLAST of Spo19616.1 vs. ExPASy Swiss-Prot
Match: VOZ1_ARATH (Transcription factor VOZ1 OS=Arabidopsis thaliana GN=VOZ1 PE=1 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 2.200e-88 Identity = 165/259 (63.71%), Postives = 193/259 (74.52%), Query Frame = 1
BLAST of Spo19616.1 vs. ExPASy Swiss-Prot
Match: VOZ2_ARATH (Transcription factor VOZ2 OS=Arabidopsis thaliana GN=VOZ2 PE=1 SV=2) HSP 1 Score: 301.6 bits (771), Expect = 1.700e-80 Identity = 187/470 (39.79%), Postives = 254/470 (54.04%), Query Frame = 1
BLAST of Spo19616.1 vs. TAIR (Arabidopsis)
Match: AT1G28520.1 (vascular plant one zinc finger protein) HSP 1 Score: 327.8 bits (839), Expect = 1.200e-89 Identity = 165/259 (63.71%), Postives = 193/259 (74.52%), Query Frame = 1
BLAST of Spo19616.1 vs. TAIR (Arabidopsis)
Match: AT2G42400.1 (vascular plant one zinc finger protein 2) HSP 1 Score: 301.6 bits (771), Expect = 9.500e-82 Identity = 187/470 (39.79%), Postives = 254/470 (54.04%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19616.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19616.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19616.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo19616.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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