Spo19601 (gene)

Overview
NameSpo19601
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01863 : 32311 .. 33702 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTGGTAGGAATTTGCATGATAGAGAATTACCGAGTCTCTGGTGGACTATTAGCTTTTGATCGCACTGGTGGGATAGAGAATAGGCAATGTCTTAATTTTTTCCTTTCTGTTGTGCATTTCCAGGTCAAATAATAATCCCTGTATTGAGTTTTTTTTTCCTGTGTTTATATCCCCTTATATGTCAATGTTGGGTGGTCATTGAACTTCTTTTTGTAGCGTCGCTGATCTTAGGTCTTTTCTCTTTCTTTTTTTCCTTTTTTTTTTCCTTTTTTTCTTTTTCTCCCGAGTGCTGGGTCTGTTACTTTTGATACACAGGTACAGGCTTAACAATGGTGGCTTCTTGTTAGGGCTTTTCCAAATGAAAATGGAAGGACATGTCTGTGATTTTATACTGAGGTATGCCACCAAGAGAGTCATTTTTGTATTAAGGGGTTGATTGTTAGGTGTTATATAGCCATCTTTCCCGCTGTTGGTTCACCAATGTTTGGTTTATGTCCTTTTGTCTAACTAGTTTGTAATTGTTTTGTTTTTCCTTTTTCAATTTCCTCTTTTGATGTCTTTCTTTTTCCTCCCTTTTCTATTTCCCCTGCTATTCTATTTCCAGAAATTTATTCCATTAGCTAAGCTACTAAGGTCAAGGAGAAGTAGATGTGCAGTGCATGAAAAAAGGAATTTATTGAGCAAAGCAAAGCAAAGCAGCCTGGATGGTAGATTGAATTTGTCGAATCTTGGACCAATAATTGGTTATCTAGGATAAGTCGATACGAGTTTGAGAGATTAATAATACACATTATGCACTTATAATACCTTATGCATTGGTTCAGTCTGTCTTGTTTATGTCTGTTTTCTGGGTAAACCATCGTTGTTTATTTTATGTTTTTCCCTTCATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGTTAATCACCCGCCTTATTGTCCCTCTTTTCTCCCCTTTTTGTCATTTGTACTAGGTCAAGCAGTGTGAATTGGACGCTGAAGCATGTTGGGCCCATTTTTGGGTAAATCTATCATAATTTCGATATTTTTTTTGGGAAGGGGGGTTATGTGCCTTAACGTTTATTGAAATGGCTATGATGAATTGGTGATTGTCTCTTTTAATTCATTAGATAAAGTACGTAACGACAGATTATTTACTTTCAGTGTTCTCTGTTGTTGCTTGCTGGAAGTATAACTAAATATTGATCGAGTACAAGCTTCCTTCAAAAAAATACATTACGTTCGTACAACTTCAGATTGTCACTGGTTCGATATCCAGTGAATTTGAATGTCAATACTTACCTCCTAATTTTAGGGACTGCATGTTTTATCACCACATTTATTACTCTTAAGATCAATTTGAACTTACCATGATACTTCTGTAAAG

mRNA sequence

ATGTCTTTGAGAATAGGCAATGTCTTAATTTTTTCCTTTCTGTTGTGCATTTCCAGGTCAAATAATAATCCCTGTATTGAGTTTTTTTTTCCTGTGTTTATATCCCCTTATATGTCAATGTACAGGCTTAACAATGGTGGCTTCTTGTTAGGGCTTTTCCAAATGAAAATGGAAGGACATGTCTGTGATTTTATACTGAGGTCAAGCAGTGTGAATTGGACGCTGAAGCATGTTGGGCCCATTTTTGGGTAAATCTATCATAATTTCGATATTTTTTTTGGGAAGGGGGGTTATGTGCCTTAACGTTTATTGAAATGGCTATGATGAATTGGTGATTGTCTCTTTTAATTCATTAGATAAAGTACGTAACGACAGATTATTTACTTTCAGTGTTCTCTGTTGTTGCTTGCTGGAAGTATAACTAAATATTGATCGAGTACAAGCTTCCTTCAAAAAAATACATTACGTTCGTACAACTTCAGATTGTCACTGGTTCGATATCCAGTGAATTTGAATGTCAATACTTACCTCCTAATTTTAGGGACTGCATGTTTTATCACCACATTTATTACTCTTAAGATCAATTTGAACTTACCATGATACTTCTGTAAAG

Coding sequence (CDS)

ATGTCTTTGAGAATAGGCAATGTCTTAATTTTTTCCTTTCTGTTGTGCATTTCCAGGTCAAATAATAATCCCTGTATTGAGTTTTTTTTTCCTGTGTTTATATCCCCTTATATGTCAATGTACAGGCTTAACAATGGTGGCTTCTTGTTAGGGCTTTTCCAAATGAAAATGGAAGGACATGTCTGTGATTTTATACTGAGGTCAAGCAGTGTGAATTGGACGCTGAAGCATGTTGGGCCCATTTTTGGGTAA

Protein sequence

MSLRIGNVLIFSFLLCISRSNNNPCIEFFFPVFISPYMSMYRLNNGGFLLGLFQMKMEGHVCDFILRSSSVNWTLKHVGPIFG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19601.1Spo19601.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19601.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19601.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19601.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19601.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0006572 tyrosine catabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0001510 RNA methylation
biological_process GO:0006651 diacylglycerol biosynthetic process
biological_process GO:0008219 cell death
biological_process GO:0051017 actin filament bundle assembly
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:1902000 homogentisate catabolic process
biological_process GO:0042207 styrene catabolic process
biological_process GO:0006474 N-terminal protein amino acid acetylation
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0048868 pollen tube development
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0006687 glycosphingolipid metabolic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
cellular_component GO:0005829 cytosol
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0044464 cell part
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0031248 protein acetyltransferase complex
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004334 fumarylacetoacetase activity
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0003779 actin binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016707 gibberellin 3-beta-dioxygenase activity
molecular_function GO:0008195 phosphatidate phosphatase activity
molecular_function GO:0047874 dolichyldiphosphatase activity
molecular_function GO:0008233 peptidase activity
RNA-Seq Expression