Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCAAAAAAATCAAAAAAATCTCACCCTCACGTTAGATCACCAAACTTGTGTGTTGTGACTTGTGAGTAGTTAGTCGTCATGGGTGGGCTATTTCTGACGGGTCATTAATGGTAGACGCTTGACAAAACTAAATTCTACGGAGTAAATAATAAGTAAACAACTACATAGTGTGTTGTATTTATATTGATGAGTAATTGAGTAGTGTGAGTGTCTATATATATATGTAACCTTTCTGCCTCAAACACAATCACACCCATTAACACAATTCCTTTGATTTTCTCTGTTTAACTTAATCACTTAATTAAGTTACTAATTAAACAACTAAACATGGCAACGGATTTGAACAAGATCAAGGAGAAGACCATCCTCAACACCCCAGCTCTTGTTGAGGTCAGTCAATCTTATCATTGTTCTTAAATTTTTGTATTTATTAACTAATACATGCCGAATTAACGATAATTTTGATGATTTAATAGTATGATTAAATTTGTGTTGATTTTGTATCAACAGTATATTTTGGAGACGAGTGCTTACCCAAATGAGCATCAACAATTGAAGGAAATTAGAGCTGCCACTCTTGAGAAATACAAGCACATGTACTTCTTCTTACTTTCACTTCCCCGTAATTAATCATTTCACTTCTTCCAAGGAAATCATCATTTTTTCAAAAGCGATTTCTTTGTCGGTTAGCTAATTTTGCGTGTACAGGAGTATTATGAATGCATCGGCGGATGAAGCACAATTCCTTTCATTGTTGTTGAAGCTCATGAACGCTAAAAACACCTTAGAGATCGGTGTTTTCACTGGCTACTCACTTCTTGCTACTGCACTCGCTCTACCTGAAGATGGCAAGGTGAAGTTTTTCCACATGTAAAATGTTGAAATGTCCAAATTTTTGACTGGTTAAAAGTATTTTTAGCTTGCTAATTGTGAAATTAAAAGAACAATTTATTGTAATTGACATTTTAATTAAGACACTAATTAATCATTAATTTTGTGATGATTGTAGGTTCTAGCCGTTGATCCTGATAGAGAGGCGTATGAGGTTGGACTACCTGCCATTAAAAAGGCTGGAGTTGAACACAAAATCGACTTTGTTGAAGGTTCTGCCACGCCGTTTTTGAATGATCTCGTAAACAAGGTAATTCATACAGAGTACTAATTTTAAGTCATTGATTTAAATCAGCGGCTAGGCCAGGATTTTTATATCAATGTGTTTACATTTTAATAAAATAATTATCTGAACCATACTACCTCCGTTTCGCAATAGATGCATCATTTTTTTTTACGTAACCCAACATGCTTCTTTCAACATTAATATCTCTTATTGCGTGTAAGTAAAAATTGATATTTGGAATCCTCACATTGATACGAATTTAACAAGATCTCACTTGACTATGTTTGTTTTTACATAATGTGAAAAAATAATTGTCAAAGTTAGTTAATGAATAGTGTCCAAAAGAGAAACGATGCATCTATTGTGGAACGGAGGAAGTGTTAATTTACCTATTTTAATAAATATAAAAAGATATAAACGTTTTCCTCTCAAAAACATAAAAAAGTTTAGGGTGGCGAGCCGACCACCCTTGTAAGTTGTAACCTGTTTAAACAACTCGGTTGATGGATCACCCTAACGGGAACCAACTCTGTACGACAACTCTAAAATAATTACACAAAATTATAATGTAAGGAGAGTTACAGGCAAGAATCAATCCTGATAGATAAGAAGAAGTTACATTAGGAGACCCTCCACTGGTAAATTAATAAATTATGTATGGTAGAATATTTGTAACATGGGTTTGGTACTAAAAATGCAGGGTAAGGAAGGAATATTTGATTTCGCATTTGTTGACGCCGATAAGGAAAACTACATCAACTACCATGAACCATTGTTGAAATTGGTTAAGGTAGGAGGAACAATAGCCTATGACAACACTCTTTGGTTCGGTTCCGTTGCGTATGCTGAAGATGATGAGATATTCAAGAATGATCCAGTGATGGGTTTTGTTAAGAAGAATGGATATGAAGCTATTAGGAAACTCAATACCTTTCTTGCAAACGACCCTCGAATCGAGTCGAGCCTTCTTTCGATTGGTGATGGTGTTACACTTTGCAGGCGCAAGTACTGAAGTAACTTATTATTGTTGTTGTGTTCTCTTATCATAAACAAAACTACTCTTTAAGTATGGGTTTTGGAAGGGATGAATGTGCCTTGTTAACTTGTTAATTAAGATCAATAAAGTGTGTTGAACTTTTCAGCATATTTCAATTTGTGCAATTTTAGCACACTACAATTTTATAATTTTCTTCGCCCGGCCCTATGAAACCACGCCGAACAACACTGGAAAAAAAAAGTAAAAATAAATTCCTTGTCTGGACAATCTGAAAAGAACGTAATGCCTATGTTTTCAACCAAGCCACATTAGCACAAAATTAGCATAAAATACAATACAGGACCCTCAAGCGAATTTATGTGTAATGCTTGCTGGGAATCCAAAGCCAGAATGATATTACTCCAACCTTTTTGTTGTATAATCAACAAACCTGTTCGCAGAGCCATCAATTCCCCCATAAGGTTTCATTGCACATAACACTTTCTCTGGAAACCAAGCACCCA AACCAAAAAAATCAAAAAAATCTCACCCTCACGTTAGATCACCAAACTTGTGTGTTGTGACTTGTGAGTAGTTAGTCGTCATGGGTGGGCTATTTCTGACGGGTCATTAATGGTAGACGCTTGACAAAACTAAATTCTACGGAGTAAATAATAAGTAAACAACTACATAGTGTGTTGTATTTATATTGATGAGTAATTGAGTAGTGTGAGTGTCTATATATATATGTAACCTTTCTGCCTCAAACACAATCACACCCATTAACACAATTCCTTTGATTTTCTCTGTTTAACTTAATCACTTAATTAAGTTACTAATTAAACAACTAAACATGGCAACGGATTTGAACAAGATCAAGGAGAAGACCATCCTCAACACCCCAGCTCTTGTTGAGTATATTTTGGAGACGAGTGCTTACCCAAATGAGCATCAACAATTGAAGGAAATTAGAGCTGCCACTCTTGAGAAATACAAGCACATGAGTATTATGAATGCATCGGCGGATGAAGCACAATTCCTTTCATTGTTGTTGAAGCTCATGAACGCTAAAAACACCTTAGAGATCGGTGTTTTCACTGGCTACTCACTTCTTGCTACTGCACTCGCTCTACCTGAAGATGGCAAGGTTCTAGCCGTTGATCCTGATAGAGAGGCGTATGAGGTTGGACTACCTGCCATTAAAAAGGCTGGAGTTGAACACAAAATCGACTTTGTTGAAGGTTCTGCCACGCCGTTTTTGAATGATCTCGTAAACAAGGGTAAGGAAGGAATATTTGATTTCGCATTTGTTGACGCCGATAAGGAAAACTACATCAACTACCATGAACCATTGTTGAAATTGGTTAAGGTAGGAGGAACAATAGCCTATGACAACACTCTTTGGTTCGGTTCCGTTGCGTATGCTGAAGATGATGAGATATTCAAGAATGATCCAGTGATGGGTTTTGTTAAGAAGAATGGATATGAAGCTATTAGGAAACTCAATACCTTTCTTGCAAACGACCCTCGAATCGAGTCGAGCCTTCTTTCGATTGGTGATGGTGTTACACTTTGCAGGCGCAAGTACTGAAGTAACTTATTATTGTTGTTGTGTTCTCTTATCATAAACAAAACTACTCTTTAAGTATGGGTTTTGGAAGGGATGAATGTGCCTTGTTAACTTGTTAATTAAGATCAATAAAGTGTGTTGAACTTTTCAGCATATTTCAATTTGTGCAATTTTAGCACACTACAATTTTATAATTTTCTTCGCCCGGCCCTATGAAACCACGCCGAACAACACTGGAAAAAAAAAGTAAAAATAAATTCCTTGTCTGGACAATCTGAAAAGAACGTAATGCCTATGTTTTCAACCAAGCCACATTAGCACAAAATTAGCATAAAATACAATACAGGACCCTCAAGCGAATTTATGTGTAATGCTTGCTGGGAATCCAAAGCCAGAATGATATTACTCCAACCTTTTTGTTGTATAATCAACAAACCTGTTCGCAGAGCCATCAATTCCCCCATAAGGTTTCATTGCACATAACACTTTCTCTGGAAACCAAGCACCCA ATGGCAACGGATTTGAACAAGATCAAGGAGAAGACCATCCTCAACACCCCAGCTCTTGTTGAGTATATTTTGGAGACGAGTGCTTACCCAAATGAGCATCAACAATTGAAGGAAATTAGAGCTGCCACTCTTGAGAAATACAAGCACATGAGTATTATGAATGCATCGGCGGATGAAGCACAATTCCTTTCATTGTTGTTGAAGCTCATGAACGCTAAAAACACCTTAGAGATCGGTGTTTTCACTGGCTACTCACTTCTTGCTACTGCACTCGCTCTACCTGAAGATGGCAAGGTTCTAGCCGTTGATCCTGATAGAGAGGCGTATGAGGTTGGACTACCTGCCATTAAAAAGGCTGGAGTTGAACACAAAATCGACTTTGTTGAAGGTTCTGCCACGCCGTTTTTGAATGATCTCGTAAACAAGGGTAAGGAAGGAATATTTGATTTCGCATTTGTTGACGCCGATAAGGAAAACTACATCAACTACCATGAACCATTGTTGAAATTGGTTAAGGTAGGAGGAACAATAGCCTATGACAACACTCTTTGGTTCGGTTCCGTTGCGTATGCTGAAGATGATGAGATATTCAAGAATGATCCAGTGATGGGTTTTGTTAAGAAGAATGGATATGAAGCTATTAGGAAACTCAATACCTTTCTTGCAAACGACCCTCGAATCGAGTCGAGCCTTCTTTCGATTGGTGATGGTGTTACACTTTGCAGGCGCAAGTACTGA MATDLNKIKEKTILNTPALVEYILETSAYPNEHQQLKEIRAATLEKYKHMSIMNASADEAQFLSLLLKLMNAKNTLEIGVFTGYSLLATALALPEDGKVLAVDPDREAYEVGLPAIKKAGVEHKIDFVEGSATPFLNDLVNKGKEGIFDFAFVDADKENYINYHEPLLKLVKVGGTIAYDNTLWFGSVAYAEDDEIFKNDPVMGFVKKNGYEAIRKLNTFLANDPRIESSLLSIGDGVTLCRRKY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19595.1 vs. NCBI nr
Match: gi|902155639|gb|KNA05927.1| (hypothetical protein SOVF_185800 [Spinacia oleracea]) HSP 1 Score: 486.1 bits (1250), Expect = 3.600e-134 Identity = 243/245 (99.18%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo19595.1 vs. NCBI nr
Match: gi|731343221|ref|XP_010682786.1| (PREDICTED: flavonoid 3',5'-methyltransferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 423.7 bits (1088), Expect = 2.200e-115 Identity = 212/242 (87.60%), Postives = 227/242 (93.80%), Query Frame = 1
BLAST of Spo19595.1 vs. NCBI nr
Match: gi|902181023|gb|KNA09655.1| (hypothetical protein SOVF_151580 [Spinacia oleracea]) HSP 1 Score: 416.4 bits (1069), Expect = 3.500e-113 Identity = 199/245 (81.22%), Postives = 226/245 (92.24%), Query Frame = 1
BLAST of Spo19595.1 vs. NCBI nr
Match: gi|902202070|gb|KNA14162.1| (hypothetical protein SOVF_110060 [Spinacia oleracea]) HSP 1 Score: 406.0 bits (1042), Expect = 4.700e-110 Identity = 202/245 (82.45%), Postives = 220/245 (89.80%), Query Frame = 1
BLAST of Spo19595.1 vs. NCBI nr
Match: gi|902237157|gb|KNA24667.1| (hypothetical protein SOVF_013540 [Spinacia oleracea]) HSP 1 Score: 335.1 bits (858), Expect = 1.000e-88 Identity = 165/237 (69.62%), Postives = 201/237 (84.81%), Query Frame = 1
BLAST of Spo19595.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QF85_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185800 PE=4 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 2.500e-134 Identity = 243/245 (99.18%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo19595.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C131_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g150930 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 1.500e-115 Identity = 212/242 (87.60%), Postives = 227/242 (93.80%), Query Frame = 1
BLAST of Spo19595.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR22_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151580 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 2.400e-113 Identity = 199/245 (81.22%), Postives = 226/245 (92.24%), Query Frame = 1
BLAST of Spo19595.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5U3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110060 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 3.300e-110 Identity = 202/245 (82.45%), Postives = 220/245 (89.80%), Query Frame = 1
BLAST of Spo19595.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0N3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_013540 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 7.100e-89 Identity = 165/237 (69.62%), Postives = 201/237 (84.81%), Query Frame = 1
BLAST of Spo19595.1 vs. ExPASy Swiss-Prot
Match: FAOMT_VITVI (Flavonoid 3',5'-methyltransferase OS=Vitis vinifera GN=FAOMT PE=1 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.200e-81 Identity = 153/242 (63.22%), Postives = 190/242 (78.51%), Query Frame = 1
BLAST of Spo19595.1 vs. ExPASy Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 8.700e-72 Identity = 140/233 (60.09%), Postives = 175/233 (75.11%), Query Frame = 1
BLAST of Spo19595.1 vs. ExPASy Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 8.100e-70 Identity = 139/238 (58.40%), Postives = 172/238 (72.27%), Query Frame = 1
BLAST of Spo19595.1 vs. ExPASy Swiss-Prot
Match: CAMT_EUCGU (Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gunnii PE=2 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.100e-69 Identity = 138/238 (57.98%), Postives = 175/238 (73.53%), Query Frame = 1
BLAST of Spo19595.1 vs. ExPASy Swiss-Prot
Match: CAMT1_EUCGL (Caffeoyl-CoA O-methyltransferase 1 OS=Eucalyptus globulus GN=CCOMT PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.200e-68 Identity = 137/238 (57.56%), Postives = 175/238 (73.53%), Query Frame = 1
BLAST of Spo19595.1 vs. TAIR (Arabidopsis)
Match: AT1G67980.1 (caffeoyl-CoA 3-O-methyltransferase) HSP 1 Score: 265.0 bits (676), Expect = 4.600e-71 Identity = 139/238 (58.40%), Postives = 172/238 (72.27%), Query Frame = 1
BLAST of Spo19595.1 vs. TAIR (Arabidopsis)
Match: AT4G34050.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 253.4 bits (646), Expect = 1.400e-67 Identity = 133/239 (55.65%), Postives = 174/239 (72.80%), Query Frame = 1
BLAST of Spo19595.1 vs. TAIR (Arabidopsis)
Match: AT1G67990.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 248.4 bits (633), Expect = 4.400e-66 Identity = 126/237 (53.16%), Postives = 175/237 (73.84%), Query Frame = 1
BLAST of Spo19595.1 vs. TAIR (Arabidopsis)
Match: AT4G26220.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 231.9 bits (590), Expect = 4.300e-61 Identity = 128/241 (53.11%), Postives = 166/241 (68.88%), Query Frame = 1
BLAST of Spo19595.1 vs. TAIR (Arabidopsis)
Match: AT1G24735.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 212.6 bits (540), Expect = 2.700e-55 Identity = 129/284 (45.42%), Postives = 159/284 (55.99%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19595.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19595.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19595.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19595.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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