Spo19588 (gene) | SpinachBase

Overview


Name	Spo19588
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Thioredoxin
Location	SpoScf_00508 : 193061 .. 195878 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAATAACAAACGACTTTGAATATATTCCCAAAAAGCATTAAAAAAAATAGAATACATTCTTATACTTCCTTGTGTGCGACTGCGCAATTGTTCATCCGTCAAAGCTTAAACAAACCAAATTACAGAAAGAGAAGCCCTCAAAGCTACTGAGAGAGAGAATGGGAGCAATACTGTCATCATTATTTGGCACCGGTGAGGCATATGCGGCGGAAGGCCCGGCGGAGGGTTCGTCGGAATCTCGCGTACTCACTTTCCACTCAGCCAATCGCTGGCAGCTGCACTACAATTCCTTGAAAGATTCCAACCAATTGGTTCGACAATTCTTTTCTCTAACCCTAATTTCTTCAATTTTTCAGTATTGAATGTTTAAAAAATTTGATCGGCGATTTGGAAAATTGCAGTTGGTTGTGGATTTTGCGGCGTCCTGGTGTGGGCCCTGCAAAGTCATTGAGCCGGCGGTGAAGGCCATTGCTAATAAGTTTCCCAGTGTCGAATTCGCCAAAATCGACGTCGATGAACTGCCGGTAATCACCTATTGTTCAACCTTTCTTCATCGTTTTTTTTTTTTTGTCAAATGCGATTTTGTGTGAATTTATTTACCTGTGACGTGTAATTAGTTTTACGATTAAGAGCTAAAGTCTGAGTGTGATGAGAAATGGTTGCGTTCAACTTTCCGGAACAGTCCAGAATTATGTTAGCAATTAGCAGCCTCCTTTAGGAAATGAAACAATGGAATCGTAATGGACTCTATGTCTACTTTTATATGGATTGTTAGACTTCGAATTTCCATGTATGCATTTTCAGTAGCAGTAGCAGTACCAGACGATTTTGTGAGTGGCAGTGGAAATTAACCCAGAGAAACAAATGTTTGTTACTTGAAATGCATTGTGTTCGACATTCATAAACTATTAAACTGCACCTAAATATTATAGGTACAAATAATTGAATATGCTCTAAATTCATTGTGCTTCCTTGCATTTAAAGGACCAAGGATGTACCAATGATGTCTTGGCCTAGCGGTTAAGACTTATTAATTGGTCACAAGTTCAAATCCCTCTTCCCCCATTTATGACTTGTAATACATTATGGCTCATTCGCACCAAAAAGGACTGACAATGTAAGAGATTGTTTTGTGGAAGGATGAGCCTAATTGGTTCATAGAAATCCGAGTTATTTCTAGATACATCATCTTTTCAACCTTTCACCTCCTCAGTGCTAGTTGCGGGATCATGTTGTTGTAGTAGTCAAAGTATGTATGCTGGTTAACTAAATCATTTTTTAGGAGTATGTCTCCTGCATAAACTTTCTAAGGATTCAAACTTTCAATTATTCTTGTAGCATATCAGAAGCTTAGTTTGAAGTGTTGCTTCTGTGAATTGTAAGTGATGATGGCATAAAGGAAATTGCATGTTTCTTGTTTGTGCAAACACACAATTCCATTGAGTTGAAAGGGACAGTTAATTAAACTAAATTATCAATTCATATTGTCCTGTTGCGTTGAATTGTATGTACGTGATCTTCATGGAATATGCTGTATTTTTGCAACTGAATGCTGACATGTTCCTGAAATAAAAGTTCGACTTGGATATACGTCTAACTCAGTTGTCCAATGTCTGAGTATGCTGTTGTGGATGAGTGTGAAACTTTTGTGCTTCCTTTGACAAATTACTTGTTTTTGGAATCTGGATCATTGTTGAATAGTACTCCTTGCATTCAGAATTATCTGTCACATCATCTTAACCACTCAAAATTAGGATATAGTATTGTTTTACAAAAAGATATTTTATAGTTGGGGTATTTCTATTCTATTCCCATAATTTAGTCAAGCTGGTGGCGTATTTGAAAATCTAATTATAACCCATTCGTATATCAAGGAGTGTTATGTTTTTCAATTCTGGATAGAGGGGGTAATATTTACATTATCGCTTGAGAAAGAGAATTTGGGGAATATACAGTTATGAGAAATGAATGAAATTGATGGTAAGAAAAGAAGATTTTACCTTCCAGTTCGCTGCATCTTACACCTGGTAATGGCTTGGTAATGCATAGCATAGTGTCTACTTCATTTTGATTTAGCACCGTTGTAGAACGTTTACAATTTGCCAAAAATGAAACTGGAGGGATGCATGACCATTGTAATTGTGGAGATTTCGTGGACTTAAAGATTAACAAATGGGAATAACAATTTATAGTGAGTTATTCTCATGTTTTTCTTAATTGCAAAAGTGGTACTGAAGTCCAAAGTTTCTTTAAATGCACAATAGGACGTGGCGCGAGAATTTGAGGTGCAAGCAATGCCGACATTCATCTTTATTAAACAGGGAAAGGTGGTGGACAAGGTGGTTGGTGCCAAAAAGGATGAACTTGAGAAGAAGATTGCAAATTACACATCATCGTAATCAATATCCTACTTTGGAGTAACAGGCAGTAGAAGCTGCCCCTAAGGCAATGTTCTTTGAATTGTGGCAAGATTATTATCTCTAGTTTGATGAAGACGTTGTTTATGAGCTTTTGTTATGCACATCTTGTCTATACGTTTACATCCTTGATATCGCAGCATGTTATTGATTATGCAACTGCTGTCTGTATGATAACAATGGCTGATATATTCTGTCATACTCTCTTCTTCATCTTCCTGTTATGCTCGAATCTTTATTCATTTTGAACTTTACCTCGCACCAATGTGATGGATTTGATTAATTTGCTCGTCTTCTATGTGCTTGCCATTTTAGATGTGTTTGCATTTAATCATTCATGGGCCAGCTAGGAAATTTTGTTGGAGAAGGTTAAGGATAGCGCAAATTTTTGGCTATACC

mRNA sequence

TAAAATAACAAACGACTTTGAATATATTCCCAAAAAGCATTAAAAAAAATAGAATACATTCTTATACTTCCTTGTGTGCGACTGCGCAATTGTTCATCCGTCAAAGCTTAAACAAACCAAATTACAGAAAGAGAAGCCCTCAAAGCTACTGAGAGAGAGAATGGGAGCAATACTGTCATCATTATTTGGCACCGGTGAGGCATATGCGGCGGAAGGCCCGGCGGAGGGTTCGTCGGAATCTCGCGTACTCACTTTCCACTCAGCCAATCGCTGGCAGCTGCACTACAATTCCTTGAAAGATTCCAACCAATTGTTGGTTGTGGATTTTGCGGCGTCCTGGTGTGGGCCCTGCAAAGTCATTGAGCCGGCGGTGAAGGCCATTGCTAATAAGTTTCCCAGTGTCGAATTCGCCAAAATCGACGTCGATGAACTGCCGGACGTGGCGCGAGAATTTGAGGTGCAAGCAATGCCGACATTCATCTTTATTAAACAGGGAAAGGTGGTGGACAAGGTGGTTGGTGCCAAAAAGGATGAACTTGAGAAGAAGATTGCAAATTACACATCATCGTAATCAATATCCTACTTTGGAGTAACAGGCAGTAGAAGCTGCCCCTAAGGCAATGTTCTTTGAATTGTGGCAAGATTATTATCTCTAGTTTGATGAAGACGTTGTTTATGAGCTTTTGTTATGCACATCTTGTCTATACGTTTACATCCTTGATATCGCAGCATGTTATTGATTATGCAACTGCTGTCTGTATGATAACAATGGCTGATATATTCTGTCATACTCTCTTCTTCATCTTCCTGTTATGCTCGAATCTTTATTCATTTTGAACTTTACCTCGCACCAATGTGATGGATTTGATTAATTTGCTCGTCTTCTATGTGCTTGCCATTTTAGATGTGTTTGCATTTAATCATTCATGGGCCAGCTAGGAAATTTTGTTGGAGAAGGTTAAGGATAGCGCAAATTTTTGGCTATACC

Coding sequence (CDS)

ATGGGAGCAATACTGTCATCATTATTTGGCACCGGTGAGGCATATGCGGCGGAAGGCCCGGCGGAGGGTTCGTCGGAATCTCGCGTACTCACTTTCCACTCAGCCAATCGCTGGCAGCTGCACTACAATTCCTTGAAAGATTCCAACCAATTGTTGGTTGTGGATTTTGCGGCGTCCTGGTGTGGGCCCTGCAAAGTCATTGAGCCGGCGGTGAAGGCCATTGCTAATAAGTTTCCCAGTGTCGAATTCGCCAAAATCGACGTCGATGAACTGCCGGACGTGGCGCGAGAATTTGAGGTGCAAGCAATGCCGACATTCATCTTTATTAAACAGGGAAAGGTGGTGGACAAGGTGGTTGGTGCCAAAAAGGATGAACTTGAGAAGAAGATTGCAAATTACACATCATCGTAA

Protein sequence

MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASWCGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVGAKKDELEKKIANYTSS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19588.1	Spo19588.1	mRNA

Homology

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BLAST of Spo19588.1 vs. NCBI nr
Match: gi|902184971|gb|KNA10408.1| (hypothetical protein SOVF_144660 [Spinacia oleracea])

HSP 1 Score: 270.8 bits (691), Expect = 1.300e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW
Sbjct: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG
Sbjct: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120

Query: 121 AKKDELEKKIANYTSS 137
           AKKDELEKKIANYTSS
Sbjct: 121 AKKDELEKKIANYTSS 136

[Close]

BLAST of Spo19588.1 vs. NCBI nr
Match: gi|731319542|ref|XP_010670327.1| (PREDICTED: thioredoxin H2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 214.5 bits (545), Expect = 1.100e-52
Identity = 106/135 (78.52%), Postives = 119/135 (88.15%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG+ILS+L+G G A AAE   E   ESR+++FHSANRW+LHYNSLKDSNQLLVVDFAASW
Sbjct: 1   MGSILSALYGGGRAEAAEDSGE---ESRIISFHSANRWELHYNSLKDSNQLLVVDFAASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCK IEPA+KA+ANKF  VEFAKIDVDELPDVAR+FEVQAMPTFI +K GKVVDKVVG
Sbjct: 61  CGPCKFIEPAIKAMANKFSDVEFAKIDVDELPDVARQFEVQAMPTFILLKNGKVVDKVVG 120

Query: 121 AKKDELEKKIANYTS 136
           AKKDELEKKIA + +
Sbjct: 121 AKKDELEKKIAKHAA 132

[Close]

BLAST of Spo19588.1 vs. NCBI nr
Match: gi|452916780|gb|AGG19195.1| (thioredoxin H-type 4, partial [Tamarix hispida])

HSP 1 Score: 183.7 bits (465), Expect = 2.100e-43
Identity = 91/135 (67.41%), Postives = 107/135 (79.26%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG++LS++ G G A AAE  +  S  S V++FHSANRWQLH NS K+SNQLLVVDF ASW
Sbjct: 1   MGSVLSAILGGGAAAAAEDSSTPSDSSLVMSFHSANRWQLHLNSAKESNQLLVVDFTASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCK +EPAV  +A+KF  V FAKI VDELPDVA+ F VQAMPTF+ +KQGK VD+VVG
Sbjct: 61  CGPCKFMEPAVHGMASKFTDVGFAKIGVDELPDVAQGFGVQAMPTFVLLKQGKEVDRVVG 120

Query: 121 AKKDELEKKIANYTS 136
           AKKDELE KIA + S
Sbjct: 121 AKKDELENKIAKHRS 135

[Close]

BLAST of Spo19588.1 vs. NCBI nr
Match: gi|702465786|ref|XP_010029282.1| (PREDICTED: thioredoxin H2-like [Eucalyptus grandis])

HSP 1 Score: 180.6 bits (457), Expect = 1.800e-42
Identity = 89/134 (66.42%), Postives = 110/134 (82.09%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSE-SRVLTFHSANRWQLHYNSLKDSNQLLVVDFAAS 60
           MG+ LSSL G   A AA+G  E SSE SRV  FHS  RWQLH+N +KD++QL+V+DFAAS
Sbjct: 1   MGSYLSSLLG---APAADGSPESSSEPSRVQAFHSTPRWQLHFNKVKDTSQLMVIDFAAS 60

Query: 61  WCGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVV 120
           WCGPC+++EPAV A+A+KF  VEFAKIDVDEL DVAREF VQAMPTF+ +K+GK VD++V
Sbjct: 61  WCGPCRMMEPAVSAMASKFADVEFAKIDVDELSDVAREFSVQAMPTFVLVKKGKEVDRIV 120

Query: 121 GAKKDELEKKIANY 134
           GAKKDELE+K+  +
Sbjct: 121 GAKKDELERKVQKH 131

[Close]

BLAST of Spo19588.1 vs. NCBI nr
Match: gi|593332361|ref|XP_007139606.1| (hypothetical protein PHAVU_008G044000g [Phaseolus vulgaris])

HSP 1 Score: 179.5 bits (454), Expect = 4.000e-42
Identity = 84/135 (62.22%), Postives = 108/135 (80.00%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG I+S++FG G     + P+    +SRV +FHS+ RWQLH+N LKD+++L+VVDF+ASW
Sbjct: 1   MGGIISTIFGAG----GDAPSYSEEDSRVTSFHSSARWQLHFNELKDTSKLVVVDFSASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCK IEPA+ A+A K+  V+F KIDVDEL DVA EF+VQAMPTF+ +K+GKV+DKVVG
Sbjct: 61  CGPCKFIEPAIHAMAEKYTDVDFVKIDVDELSDVAGEFQVQAMPTFVLLKKGKVIDKVVG 120

Query: 121 AKKDELEKKIANYTS 136
           AKKDELEKKI  + S
Sbjct: 121 AKKDELEKKIEKHRS 131

[Close]

BLAST of Spo19588.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUL5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_144660 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 9.200e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW
Sbjct: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG
Sbjct: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120

Query: 121 AKKDELEKKIANYTSS 137
           AKKDELEKKIANYTSS
Sbjct: 121 AKKDELEKKIANYTSS 136

[Close]

BLAST of Spo19588.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FMS2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040490 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 7.800e-53
Identity = 106/135 (78.52%), Postives = 119/135 (88.15%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG+ILS+L+G G A AAE   E   ESR+++FHSANRW+LHYNSLKDSNQLLVVDFAASW
Sbjct: 1   MGSILSALYGGGRAEAAEDSGE---ESRIISFHSANRWELHYNSLKDSNQLLVVDFAASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCK IEPA+KA+ANKF  VEFAKIDVDELPDVAR+FEVQAMPTFI +K GKVVDKVVG
Sbjct: 61  CGPCKFIEPAIKAMANKFSDVEFAKIDVDELPDVARQFEVQAMPTFILLKNGKVVDKVVG 120

Query: 121 AKKDELEKKIANYTS 136
           AKKDELEKKIA + +
Sbjct: 121 AKKDELEKKIAKHAA 132

[Close]

BLAST of Spo19588.1 vs. UniProtKB/TrEMBL
Match: M1QS37_9CARY (Thioredoxin H-type 4 (Fragment) OS=Tamarix hispida GN=Trx4 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.500e-43
Identity = 91/135 (67.41%), Postives = 107/135 (79.26%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG++LS++ G G A AAE  +  S  S V++FHSANRWQLH NS K+SNQLLVVDF ASW
Sbjct: 1   MGSVLSAILGGGAAAAAEDSSTPSDSSLVMSFHSANRWQLHLNSAKESNQLLVVDFTASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCK +EPAV  +A+KF  V FAKI VDELPDVA+ F VQAMPTF+ +KQGK VD+VVG
Sbjct: 61  CGPCKFMEPAVHGMASKFTDVGFAKIGVDELPDVAQGFGVQAMPTFVLLKQGKEVDRVVG 120

Query: 121 AKKDELEKKIANYTS 136
           AKKDELE KIA + S
Sbjct: 121 AKKDELENKIAKHRS 135

[Close]

BLAST of Spo19588.1 vs. UniProtKB/TrEMBL
Match: V7B216_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G044000g PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.800e-42
Identity = 84/135 (62.22%), Postives = 108/135 (80.00%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG I+S++FG G     + P+    +SRV +FHS+ RWQLH+N LKD+++L+VVDF+ASW
Sbjct: 1   MGGIISTIFGAG----GDAPSYSEEDSRVTSFHSSARWQLHFNELKDTSKLVVVDFSASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCK IEPA+ A+A K+  V+F KIDVDEL DVA EF+VQAMPTF+ +K+GKV+DKVVG
Sbjct: 61  CGPCKFIEPAIHAMAEKYTDVDFVKIDVDELSDVAGEFQVQAMPTFVLLKKGKVIDKVVG 120

Query: 121 AKKDELEKKIANYTS 136
           AKKDELEKKI  + S
Sbjct: 121 AKKDELEKKIEKHRS 131

[Close]

BLAST of Spo19588.1 vs. UniProtKB/TrEMBL
Match: A0A068U1P6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039510001 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.600e-42
Identity = 88/133 (66.17%), Postives = 108/133 (81.20%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG++LSS FG GE  AA   AE S  SRV TFHS+NRWQLH+NS K  N+L+VVDFAASW
Sbjct: 1   MGSVLSSFFG-GEGAAAA--AESSEPSRVTTFHSSNRWQLHFNSSKQLNKLMVVDFAASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPCK++EP VK ++ K+  ++F KIDVDELPDVA+E +VQAMPTF+ +KQGK VD++VG
Sbjct: 61  CGPCKLMEPLVKDMSGKYTDIDFVKIDVDELPDVAQEHKVQAMPTFLLLKQGKEVDRIVG 120

Query: 121 AKKDELEKKIANY 134
           AKKDELEKKI  +
Sbjct: 121 AKKDELEKKILKH 130

[Close]

BLAST of Spo19588.1 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.800e-42
Identity = 80/131 (61.07%), Postives = 107/131 (81.68%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG  LS++FG+GE   A G    S  SRVL F S+ RWQLH+N +K+SN+LLVVDF+ASW
Sbjct: 1   MGGALSTVFGSGEDATAAGTE--SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPC++IEPA+ A+A+KF  V+F K+DVDELPDVA+EF V AMPTF+ +K+GK +++++G
Sbjct: 61  CGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIG 120

Query: 121 AKKDELEKKIA 132
           AKKDELEKK++
Sbjct: 121 AKKDELEKKVS 129

[Close]

BLAST of Spo19588.1 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.700e-29
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 1


		  
Query: 25  SESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASWCGPCKVIEPAVKAIANKFPSVEFA 84
           +E  V   HS   W+       D+ +L+ VDF A+WCGPC+VI P    ++ KFP + F 
Sbjct: 2   AEGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFL 61

Query: 85  KIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVGAKKDELEKKIA 132
           K+DVDEL DVA+E++V+AMPTFIFIK GK VDKVVGAKKD+LE+K+A
Sbjct: 62  KVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVA 108

[Close]

BLAST of Spo19588.1 vs. ExPASy Swiss-Prot
Match: TRH22_ORYSJ (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica GN=Os03g0800700 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.300e-29
Identity = 66/137 (48.18%), Postives = 93/137 (67.88%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDS-NQLLVVDFAAS 60
           MG+  S++F    A      A+   +SRV+  HS   W   + + K + N+L+V+DF+A+
Sbjct: 1   MGSFFSTMFTPPPA------ADDGGDSRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSAT 60

Query: 61  WCGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVV 120
           WCGPC+ IEPA K +A +F    F KIDVDEL +VAR+++V+AMPTF+ IK GK V +VV
Sbjct: 61  WCGPCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVV 120

Query: 121 GAKKDELEKKIANYTSS 137
           GAKKDELE+K+  + SS
Sbjct: 121 GAKKDELERKVNMFISS 131

[Close]

BLAST of Spo19588.1 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.600e-29
Identity = 55/108 (50.93%), Postives = 80/108 (74.07%), Query Frame = 1


		  
Query: 24  SSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASWCGPCKVIEPAVKAIANKFPSVEF 83
           + E++V+  H+   W   +   KDS +L+V+DF ASWCGPC+VI P V  +A KFP V F
Sbjct: 2   AEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAF 61

Query: 84  AKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVGAKKDELEKKIA 132
            K+DVD+L DVA E++V+AMP+F+ +K+G+ V+++VGA+KDEL  KIA
Sbjct: 62  FKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIA 109

[Close]

BLAST of Spo19588.1 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.100e-28
Identity = 59/113 (52.21%), Postives = 79/113 (69.91%), Query Frame = 1


		  
Query: 24  SSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASWCGPCKVIEPAVKAIANKFPSVEF 83
           + E +V+  H+ + W  H     D  +L+VVDF ASWCGPCK I      +A K P+V F
Sbjct: 2   AEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTF 61

Query: 84  AKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVGAKKDELEKKIANYTSS 137
            K+DVDEL  VA ++ V+AMPTF+F+K+GK+VDKVVGAKKDEL++ IA + SS
Sbjct: 62  LKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISS 114

[Close]

BLAST of Spo19588.1 vs. TAIR (Arabidopsis)
Match: AT5G39950.1 (thioredoxin 2)

HSP 1 Score: 173.3 bits (438), Expect = 1.000e-43
Identity = 80/131 (61.07%), Postives = 107/131 (81.68%), Query Frame = 1


		  
Query: 1   MGAILSSLFGTGEAYAAEGPAEGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASW 60
           MG  LS++FG+GE   A G    S  SRVL F S+ RWQLH+N +K+SN+LLVVDF+ASW
Sbjct: 1   MGGALSTVFGSGEDATAAGTE--SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASW 60

Query: 61  CGPCKVIEPAVKAIANKFPSVEFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVG 120
           CGPC++IEPA+ A+A+KF  V+F K+DVDELPDVA+EF V AMPTF+ +K+GK +++++G
Sbjct: 61  CGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIG 120

Query: 121 AKKDELEKKIA 132
           AKKDELEKK++
Sbjct: 121 AKKDELEKKVS 129

[Close]

BLAST of Spo19588.1 vs. TAIR (Arabidopsis)
Match: AT3G51030.1 (thioredoxin H-type 1)

HSP 1 Score: 122.5 bits (306), Expect = 2.000e-28
Identity = 55/110 (50.00%), Postives = 74/110 (67.27%), Query Frame = 1


		  
Query: 24  SSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASWCGPCKVIEPAVKAIANKFPSVEF 83
           S E +V+  H+   W        +S  L+VVDF ASWCGPC+ I P    +A K P+V F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 84  AKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVGAKKDELEKKIANY 134
            K+D DEL  VA ++ +QAMPTF+F+K+GK++DKVVGAKKDEL+  IA +
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Spo19588.1 vs. TAIR (Arabidopsis)
Match: AT1G19730.1 (Thioredoxin superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.300e-27
Identity = 56/112 (50.00%), Postives = 80/112 (71.43%), Query Frame = 1


		  
Query: 24  SSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASWCGPCKVIEPAVKAIANKF-PSVE 83
           + E +V+  H+ + W +  +  K+SN+L+V+DF ASWC PC++I P    +A KF  S  
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 84  FAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVGAKKDELEKKIANYT 135
           F K+DVDEL  VA+EF V+AMPTF+FIK G+VVDK+VGA K++L+ KI  +T
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of Spo19588.1 vs. TAIR (Arabidopsis)
Match: AT1G69880.1 (thioredoxin H-type 8)

HSP 1 Score: 119.8 bits (299), Expect = 1.300e-27
Identity = 52/108 (48.15%), Postives = 75/108 (69.44%), Query Frame = 1


		  
Query: 29  VLTFHSANRWQLHYNSLKDSNQLLVVDFAASWCGPCKVIEPAVKAIANKFPSVEFAKIDV 88
           ++   + N+W+   N+LKD+N+LLV++F A WCGPCK +EP ++ +A K+  VEF KIDV
Sbjct: 39  IVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKIDV 98

Query: 89  DELPDVAREFEVQAMPTFIFIKQGKVVDKVVGAKKDELEKKIANYTSS 137
           D L  V  EF +  +P  +F+K+G+ VD VVG K DELE+K+  YT S
Sbjct: 99  DVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKLNKYTQS 146

[Close]

BLAST of Spo19588.1 vs. TAIR (Arabidopsis)
Match: AT1G59730.1 (thioredoxin H-type 7)

HSP 1 Score: 117.5 bits (293), Expect = 6.600e-27
Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 1


		  
Query: 22  EGSSESRVLTFHSANRWQLHYNSLKDSNQLLVVDFAASWCGPCKVIEPAVKAIANKFPSV 81
           E +S   V+   S  +W+  ++S+K SN+LLV+DF A WCGPCK +EP V+ IA+K+   
Sbjct: 16  EITSNGFVVEIESRRQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEA 75

Query: 82  EFAKIDVDELPDVAREFEVQAMPTFIFIKQGKVVDKVVGAKKDELEKKIANY 134
            FA++DVD L DVA  +    +P F+F+K+G+ +D+VVGAK DEL KKI  +
Sbjct: 76  VFARVDVDRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPDELVKKIEQH 127

The following BLAST results are available for this feature:

BLAST of Spo19588.1 vs. NCBI nr
BLAST of Spo19588.1 vs. UniProtKB/TrEMBL
BLAST of Spo19588.1 vs. ExPASy Swiss-Prot
BLAST of Spo19588.1 vs. TAIR (Arabidopsis)

BLAST of Spo19588.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902184971\|gb\|KNA10408.1\|	1.3e-69	100.	hypothetical protein SOVF_1446...	[more]
gi\|731319542\|ref\|XP_010670327.1\|	1.1e-52	78.5	PREDICTED: thioredoxin H2 [Bet...	[more]
gi\|452916780\|gb\|AGG19195.1\|	2.1e-43	67.4	thioredoxin H-type 4, partial ...	[more]
gi\|702465786\|ref\|XP_010029282.1\|	1.8e-42	66.4	PREDICTED: thioredoxin H2-like...	[more]
gi\|593332361\|ref\|XP_007139606.1\|	4.0e-42	62.2	hypothetical protein PHAVU_008...	[more]

BLAST of Spo19588.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QUL5_SPIOL	9.2e-70	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FMS2_BETVU	7.8e-53	78.5	Uncharacterized protein OS=Bet...	[more]
M1QS37_9CARY	1.5e-43	67.4	Thioredoxin H-type 4 (Fragment...	[more]
V7B216_PHAVU	2.8e-42	62.2	Uncharacterized protein OS=Pha...	[more]
A0A068U1P6_COFCA	3.6e-42	66.1	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo19588.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TRXH2_ARATH	1.8e-42	61.0	Thioredoxin H2 OS=Arabidopsis ...	[more]
TRXH_PICMA	1.7e-29	55.1	Thioredoxin H-type OS=Picea ma...	[more]
TRH22_ORYSJ	2.3e-29	48.1	Thioredoxin H2-2 OS=Oryza sati...	[more]
TRXH_FAGES	6.6e-29	50.9	Thioredoxin H-type OS=Fagopyru...	[more]
TRXH2_TOBAC	1.1e-28	52.2	Thioredoxin H-type 2 OS=Nicoti...	[more]

BLAST of Spo19588.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G39950.1	1.0e-43	61.0	thioredoxin 2	[more]
AT3G51030.1	2.0e-28	50.0	thioredoxin H-type 1	[more]
AT1G19730.1	1.3e-27	50.0	Thioredoxin superfamily protei...	[more]
AT1G69880.1	1.3e-27	48.1	thioredoxin H-type 8	[more]
AT1G59730.1	6.6e-27	47.3	thioredoxin H-type 7	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..136 score: 2.3
IPR012336	Thioredoxin-like fold	GENE3D	3.40.30.10		coord: 19..134 score: 1.0
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 36..133 score: 8.25
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 43..131 score: 2.3
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 6..135 score: 14
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 99..110 score: 1.1E-6coord: 60..69 score: 1.1E-6coord: 52..60 score: 1.
None	No IPR available	PANTHER	PTHR10438:SF243	THIOREDOXIN H2	coord: 1..136 score: 2.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009817	defense response to fungus, incompatible interaction
biological_process	GO:0000280	nuclear division
biological_process	GO:0007000	nucleolus organization
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0000103	sulfate assimilation
biological_process	GO:0006635	fatty acid beta-oxidation
cellular_component	GO:0005839	proteasome core complex
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009536	plastid
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004298	threonine-type endopeptidase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0016004	phospholipase activator activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo18842	0.71	Barchart \| Table
Spo09845	0.65	Barchart \| Table