Spo19390 (gene)

Overview
NameSpo19390
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEmbryo defective 1923
LocationSpoScf_02561 : 59200 .. 60371 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCTTTTGGAATGAGAACTCATTTTAATGGAGGAAAAACTAGCTTTACAGGTGCTGTATTCGATGACAGCCACATTGGTATGTCTGTTGTTGCCTCCTTGATTTTAGAGAATTTTTTTGGATAAGTTTTTTCTAGTGTATCGTGGCGGCTAATATGGACATAAAAGATGATTGGAAGATTTATGGTGTCCTATACTTGAATTAGTTTTAGCTGTACTGAACTCTATGGTTCTGCTCAGCTTGTTCCAACCCCTGGCATTTTACTGGTTGGTGATATGTTGTAACTTCACTAACTTGTAAGTCTGTTTACTAATTACTGAAACCAAATGTTTCTTGTCCTTCTTGAAGCTTGCTTCTACTTACTCTGTGCTGGCCTTGCTAGGGTTTACAATACTTCAGTTTTTCAGTGTGGTATTTTTTTAATGTTATCGCCATTTGCTTCATGCTGACTTCGCTTATGATATTTGCAGCGCTGGCATTTCTCATCTATGCATGGAGATCAGTCCTGTGGGAACTTTCTAATTGGCGGAAGCTGTTATTGGGCATTTTTCAGTTTGTTGGATACCTATCAAAACTTGTGTTGGCGTTTATATTCCATTTTATAGGTGACCCAATCACGTACACTGTTCTCTTTGTTGAGTCTACAGTTTATGCCATCCACTCCTTTTACTCCAGTATAGTGACGTCTGCTCCAATACCACAATTAACCTTTATCATTATGCTCGCTTCTACTGTACTGGCGATTGGAGAAGCAGCTTCTCCAGACTCAATAAAGTGTCAACCATATCTTCTTACTGCAGCTGGAATCATTGGTTATGGAGCAGTGAGAGGTTTCATCACTGAACCAGTCTTCTTGTTGATGCTTGTTGGACTCTTCAGCTATTCCCGATTTTTGAAGAAAAGGGACAATGTTTGTTCTGCATTACCTATTGCAACTGTACTGGCCTCTGTCGGTGAGCCGTGGGTTAGAATTATGGCAATCATCTCATTTACAGCATTGGCTATTTATCACCATTCAAAGAATCTTAAACAAGTAAATGAAGTATCTGAAGTCACTTCCTTCAGAGGAAAAGTTCCACTTCCTTTGTTGGGTGTCGCATTAGCCATTGGAATCCGTGTTGCTGCTAAGTGGGCTGGTTATCGCCATTTGACATGGATGATTATATAG

mRNA sequence

ATGAGATCTTTTGGAATGAGAACTCATTTTAATGGAGGAAAAACTAGCTTTACAGGTGCTGTATTCGATGACAGCCACATTGCGCTGGCATTTCTCATCTATGCATGGAGATCAGTCCTGTGGGAACTTTCTAATTGGCGGAAGCTGTTATTGGGCATTTTTCAGTTTGTTGGATACCTATCAAAACTTGTGTTGGCGTTTATATTCCATTTTATAGGTGACCCAATCACGTACACTGTTCTCTTTGTTGAGTCTACAGTTTATGCCATCCACTCCTTTTACTCCAGTATAGTGACGTCTGCTCCAATACCACAATTAACCTTTATCATTATGCTCGCTTCTACTGTACTGGCGATTGGAGAAGCAGCTTCTCCAGACTCAATAAAGTGTCAACCATATCTTCTTACTGCAGCTGGAATCATTGGTTATGGAGCAGTGAGAGGTTTCATCACTGAACCAGTCTTCTTGTTGATGCTTGTTGGACTCTTCAGCTATTCCCGATTTTTGAAGAAAAGGGACAATGTTTGTTCTGCATTACCTATTGCAACTGTACTGGCCTCTGTCGGTGAGCCGTGGGTTAGAATTATGGCAATCATCTCATTTACAGCATTGGCTATTTATCACCATTCAAAGAATCTTAAACAAGTAAATGAAGTATCTGAAGTCACTTCCTTCAGAGGAAAAGTTCCACTTCCTTTGTTGGGTGTCGCATTAGCCATTGGAATCCGTGTTGCTGCTAAGTGGGCTGGTTATCGCCATTTGACATGGATGATTATATAG

Coding sequence (CDS)

ATGAGATCTTTTGGAATGAGAACTCATTTTAATGGAGGAAAAACTAGCTTTACAGGTGCTGTATTCGATGACAGCCACATTGCGCTGGCATTTCTCATCTATGCATGGAGATCAGTCCTGTGGGAACTTTCTAATTGGCGGAAGCTGTTATTGGGCATTTTTCAGTTTGTTGGATACCTATCAAAACTTGTGTTGGCGTTTATATTCCATTTTATAGGTGACCCAATCACGTACACTGTTCTCTTTGTTGAGTCTACAGTTTATGCCATCCACTCCTTTTACTCCAGTATAGTGACGTCTGCTCCAATACCACAATTAACCTTTATCATTATGCTCGCTTCTACTGTACTGGCGATTGGAGAAGCAGCTTCTCCAGACTCAATAAAGTGTCAACCATATCTTCTTACTGCAGCTGGAATCATTGGTTATGGAGCAGTGAGAGGTTTCATCACTGAACCAGTCTTCTTGTTGATGCTTGTTGGACTCTTCAGCTATTCCCGATTTTTGAAGAAAAGGGACAATGTTTGTTCTGCATTACCTATTGCAACTGTACTGGCCTCTGTCGGTGAGCCGTGGGTTAGAATTATGGCAATCATCTCATTTACAGCATTGGCTATTTATCACCATTCAAAGAATCTTAAACAAGTAAATGAAGTATCTGAAGTCACTTCCTTCAGAGGAAAAGTTCCACTTCCTTTGTTGGGTGTCGCATTAGCCATTGGAATCCGTGTTGCTGCTAAGTGGGCTGGTTATCGCCATTTGACATGGATGATTATATAG

Protein sequence

MRSFGMRTHFNGGKTSFTGAVFDDSHIALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVESTVYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAVRGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAIYHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19390.1Spo19390.1mRNA


Homology
[Close]
BLAST of Spo19390.1 vs. NCBI nr
Match: gi|902037826|gb|KNA02683.1| (hypothetical protein SOVF_216360, partial [Spinacia oleracea])

HSP 1 Score: 447.2 bits (1149), Expect = 2.000e-122
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1 

		  

Query: 29  LAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVESTVY 88
           LAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVESTVY
Sbjct: 1   LAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVESTVY 60

Query: 89  AIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAVRG 148
           AIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAVRG
Sbjct: 61  AIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAVRG 120

Query: 149 FITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAIYH 208
           FITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAIYH
Sbjct: 121 FITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAIYH 180

Query: 209 HSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
           HSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII
Sbjct: 181 HSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 231
[Close]
BLAST of Spo19390.1 vs. NCBI nr
Match: gi|731356094|ref|XP_010689490.1| (PREDICTED: uncharacterized protein LOC104903192 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 363.6 bits (932), Expect = 2.800e-97
Identity = 186/233 (79.83%), Postives = 204/233 (87.55%), Query Frame = 1 

		  

Query: 27  IALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVEST 86
           IAL FLIYAWR VLWELSNWR L  GIF FVGY+ KL+LA I+ FIGDPITYTVL+VE+ 
Sbjct: 118 IALPFLIYAWRLVLWELSNWRNLFFGIFPFVGYILKLILALIYRFIGDPITYTVLYVETA 177

Query: 87  VYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAV 146
           V+A  S YSSIVTSAPIP+LTFIIML+ TVLAIGEAASP+SIKCQPYLLTAAG+IGYGAV
Sbjct: 178 VHATRSLYSSIVTSAPIPELTFIIMLSLTVLAIGEAASPNSIKCQPYLLTAAGLIGYGAV 237

Query: 147 RGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAI 206
           RG I EP+F LMLVGLFS+SRF KKRD V SALPIATVLASVGEPWVR++AIISFTALAI
Sbjct: 238 RGVIIEPLFWLMLVGLFSFSRFFKKRDYVSSALPIATVLASVGEPWVRVLAIISFTALAI 297

Query: 207 YHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
           +HHSK L + N   EVTS  G +PLPLLGVALAIGIRVAAKWAGYRHLTWMI+
Sbjct: 298 HHHSKELAEGNAKGEVTSSSGNIPLPLLGVALAIGIRVAAKWAGYRHLTWMIV 350
[Close]
BLAST of Spo19390.1 vs. NCBI nr
Match: gi|645248274|ref|XP_008230221.1| (PREDICTED: uncharacterized protein LOC103329522 [Prunus mume])

HSP 1 Score: 307.4 bits (786), Expect = 2.400e-80
Identity = 151/233 (64.81%), Postives = 190/233 (81.55%), Query Frame = 1 

		  

Query: 27  IALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVEST 86
           +AL FLIYAWR+VL EL+NWRK  L + +FVGYL KL+LA IFHF+GDPIT+ + F+E+T
Sbjct: 95  VALVFLIYAWRAVLLELANWRKAALAVVRFVGYLLKLILALIFHFLGDPITFIIRFIETT 154

Query: 87  VYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAV 146
           +YA+ SFYS IV  APIP+LT +IMLASTVLAI EA  P+SI CQP+LLTA+G++GY AV
Sbjct: 155 IYALRSFYSGIVAYAPIPELTTVIMLASTVLAIAEAVVPNSINCQPFLLTASGVVGYAAV 214

Query: 147 RGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAI 206
            G+I+EP F  +LVGL+ YSRF+KKRD+V SALP A VLA+VGEP++R++ I S+ +LAI
Sbjct: 215 TGYISEPFFWTILVGLYGYSRFVKKRDDVTSALPAAAVLAAVGEPYIRVLVISSYLSLAI 274

Query: 207 YHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
            HHSK L +  E  E+     K+P+PLLGVALAIGIR+AAKWAGYRHLTWMI+
Sbjct: 275 LHHSKKLSERKE--EIVVTNRKLPMPLLGVALAIGIRLAAKWAGYRHLTWMIV 325
[Close]
BLAST of Spo19390.1 vs. NCBI nr
Match: gi|595938078|ref|XP_007215629.1| (hypothetical protein PRUPE_ppa008067mg [Prunus persica])

HSP 1 Score: 303.9 bits (777), Expect = 2.700e-79
Identity = 149/233 (63.95%), Postives = 188/233 (80.69%), Query Frame = 1 

		  

Query: 27  IALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVEST 86
           +AL FLIYAWR+VL EL+NWRK  L + +FVGYL KL+LA IFHF+GDPIT+ + F+E+T
Sbjct: 116 VALVFLIYAWRAVLLELANWRKAALAVVRFVGYLLKLILALIFHFLGDPITFIIRFIETT 175

Query: 87  VYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAV 146
           +Y + SFYS IV  APIP+LT +IMLASTVLAI EA  P+SI CQP+LLTA+G++GY AV
Sbjct: 176 IYTLRSFYSGIVAYAPIPELTTVIMLASTVLAIAEAVVPNSINCQPFLLTASGVVGYAAV 235

Query: 147 RGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAI 206
            G+I+EP F  +L+GL+ YSRF+KKRD+V SALP A VLA+VGEP++R++ I S+ ALAI
Sbjct: 236 TGYISEPFFWTILMGLYGYSRFVKKRDDVTSALPAAAVLAAVGEPYIRVLVISSYLALAI 295

Query: 207 YHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
            HHSK L +  E  E+     K+P+PLLGVALAIGI +AAKWAGYRHLTWMI+
Sbjct: 296 LHHSKKLSERKE--EIVVTNRKLPMPLLGVALAIGIHLAAKWAGYRHLTWMIV 346
[Close]
BLAST of Spo19390.1 vs. NCBI nr
Match: gi|694320265|ref|XP_009350622.1| (PREDICTED: uncharacterized protein LOC103942134 [Pyrus x bretschneideri])

HSP 1 Score: 300.4 bits (768), Expect = 2.900e-78
Identity = 144/233 (61.80%), Postives = 186/233 (79.83%), Query Frame = 1 

		  

Query: 27  IALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVEST 86
           +AL FLIYAWR+VL EL+NWRK   G+ +FVGYL KL+LA IFHFIGDPIT  + F+E+T
Sbjct: 116 VALVFLIYAWRAVLLELANWRKAAEGVVRFVGYLLKLILALIFHFIGDPITSVIRFIETT 175

Query: 87  VYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAV 146
           +YAI SFYS IV  APIP+LT +I+LASTVLAI EA  P+++ CQP+LLTA+G++GY AV
Sbjct: 176 LYAIRSFYSGIVAYAPIPELTTVIILASTVLAIAEAVVPNAVNCQPFLLTASGVVGYAAV 235

Query: 147 RGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAI 206
            G+I+EP+F  +LVG + YSR +KKRD++ SALP A V++++GEPWVR++ I S+ ALAI
Sbjct: 236 AGYISEPLFWTILVGFYGYSRLVKKRDDITSALPAAAVMSAIGEPWVRVLVIASYLALAI 295

Query: 207 YHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
           +HHSK +    E  E+     K+P+PLLG  LAIGIR+AAKWAGYRHLTWMI+
Sbjct: 296 FHHSKKVSDTEE--EIVVANRKLPMPLLGAGLAIGIRLAAKWAGYRHLTWMIV 346
[Close]
BLAST of Spo19390.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7M2_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_216360 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.400e-122
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1 

		  

Query: 29  LAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVESTVY 88
           LAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVESTVY
Sbjct: 1   LAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVESTVY 60

Query: 89  AIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAVRG 148
           AIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAVRG
Sbjct: 61  AIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAVRG 120

Query: 149 FITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAIYH 208
           FITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAIYH
Sbjct: 121 FITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAIYH 180

Query: 209 HSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
           HSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII
Sbjct: 181 HSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 231
[Close]
BLAST of Spo19390.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLS7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g207650 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.000e-97
Identity = 186/233 (79.83%), Postives = 204/233 (87.55%), Query Frame = 1 

		  

Query: 27  IALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVEST 86
           IAL FLIYAWR VLWELSNWR L  GIF FVGY+ KL+LA I+ FIGDPITYTVL+VE+ 
Sbjct: 118 IALPFLIYAWRLVLWELSNWRNLFFGIFPFVGYILKLILALIYRFIGDPITYTVLYVETA 177

Query: 87  VYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAV 146
           V+A  S YSSIVTSAPIP+LTFIIML+ TVLAIGEAASP+SIKCQPYLLTAAG+IGYGAV
Sbjct: 178 VHATRSLYSSIVTSAPIPELTFIIMLSLTVLAIGEAASPNSIKCQPYLLTAAGLIGYGAV 237

Query: 147 RGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAI 206
           RG I EP+F LMLVGLFS+SRF KKRD V SALPIATVLASVGEPWVR++AIISFTALAI
Sbjct: 238 RGVIIEPLFWLMLVGLFSFSRFFKKRDYVSSALPIATVLASVGEPWVRVLAIISFTALAI 297

Query: 207 YHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
           +HHSK L + N   EVTS  G +PLPLLGVALAIGIRVAAKWAGYRHLTWMI+
Sbjct: 298 HHHSKELAEGNAKGEVTSSSGNIPLPLLGVALAIGIRVAAKWAGYRHLTWMIV 350
[Close]
BLAST of Spo19390.1 vs. UniProtKB/TrEMBL
Match: M5X5M3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008067mg PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.900e-79
Identity = 149/233 (63.95%), Postives = 188/233 (80.69%), Query Frame = 1 

		  

Query: 27  IALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVEST 86
           +AL FLIYAWR+VL EL+NWRK  L + +FVGYL KL+LA IFHF+GDPIT+ + F+E+T
Sbjct: 116 VALVFLIYAWRAVLLELANWRKAALAVVRFVGYLLKLILALIFHFLGDPITFIIRFIETT 175

Query: 87  VYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAV 146
           +Y + SFYS IV  APIP+LT +IMLASTVLAI EA  P+SI CQP+LLTA+G++GY AV
Sbjct: 176 IYTLRSFYSGIVAYAPIPELTTVIMLASTVLAIAEAVVPNSINCQPFLLTASGVVGYAAV 235

Query: 147 RGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAI 206
            G+I+EP F  +L+GL+ YSRF+KKRD+V SALP A VLA+VGEP++R++ I S+ ALAI
Sbjct: 236 TGYISEPFFWTILMGLYGYSRFVKKRDDVTSALPAAAVLAAVGEPYIRVLVISSYLALAI 295

Query: 207 YHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
            HHSK L +  E  E+     K+P+PLLGVALAIGI +AAKWAGYRHLTWMI+
Sbjct: 296 LHHSKKLSERKE--EIVVTNRKLPMPLLGVALAIGIHLAAKWAGYRHLTWMIV 346
[Close]
BLAST of Spo19390.1 vs. UniProtKB/TrEMBL
Match: A0A059CDH9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00334 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.600e-76
Identity = 145/233 (62.23%), Postives = 183/233 (78.54%), Query Frame = 1 

		  

Query: 27  IALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVEST 86
           +ALAFL+YAWR+VL+ELSNW+K  L I  FVGYLSKLVLA IFHFIGDPIT T+  +E+ 
Sbjct: 133 VALAFLVYAWRAVLFELSNWKKAALAIVGFVGYLSKLVLALIFHFIGDPITSTIRCIETA 192

Query: 87  VYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAV 146
           +Y++ +FYS IV  AP+P+LT IIMLAS V AIGEA  P+ +  QPY LT AG+IGY AV
Sbjct: 193 IYSVRAFYSGIVAYAPVPELTVIIMLASAVAAIGEAVVPNCVSSQPYSLTVAGLIGYAAV 252

Query: 147 RGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAI 206
           RG+I+EP+   +LVGL+ +SR +KKRD+V S LP A V+A++GEPWVR++ I S+ ALAI
Sbjct: 253 RGYISEPLLWTLLVGLYGFSRIIKKRDDVSSLLPAAAVMAAIGEPWVRLVVIASYLALAI 312

Query: 207 YHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
            HHS+ L +  EV EV + R ++P+PL   ALAIGIRVAAKW GYRHLTWMI+
Sbjct: 313 SHHSRKLSEGKEVEEVVTNR-RLPMPLFVAALAIGIRVAAKWVGYRHLTWMIV 364
[Close]
BLAST of Spo19390.1 vs. UniProtKB/TrEMBL
Match: F6HHK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00300 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.300e-76
Identity = 143/234 (61.11%), Postives = 183/234 (78.21%), Query Frame = 1 

		  

Query: 26  HIALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVES 85
           +IAL FL+YAWR+VLWELSNWRK  L +  F GYL KL LA IFHFIG+P+T  +  VE+
Sbjct: 128 YIALVFLVYAWRTVLWELSNWRKAALAVVYFAGYLLKLALALIFHFIGNPVTSLIRCVET 187

Query: 86  TVYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGA 145
            +Y I +FYSSIVT AP+P+LT II+LAS VLAI EA  PDS+  QPYLLT +G+IG+ A
Sbjct: 188 ALYTIRAFYSSIVTYAPVPELTTIIILASAVLAIAEATVPDSVNSQPYLLTVSGLIGFAA 247

Query: 146 VRGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALA 205
           V+ FI+EP F  +LVGLF++++ +KKRD V SALP+A VLA+VG+PW+R++ I S+TALA
Sbjct: 248 VKDFISEPFFWTLLVGLFAFAQLVKKRDYVSSALPVAAVLAAVGQPWLRVVVIASYTALA 307

Query: 206 IYHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
           I HHSK +    E  EV +   ++P+PLL V+LAIGI +AAKWAGYRHLTWMI+
Sbjct: 308 ISHHSKKISDGKEEGEVAATSRRLPVPLLCVSLAIGIHLAAKWAGYRHLTWMIV 361
[Close]
BLAST of Spo19390.1 vs. TAIR (Arabidopsis)
Match: AT4G28210.1 (embryo defective 1923)

HSP 1 Score: 270.4 bits (690), Expect = 1.200e-72
Identity = 134/233 (57.51%), Postives = 175/233 (75.11%), Query Frame = 1 

		  

Query: 27  IALAFLIYAWRSVLWELSNWRKLLLGIFQFVGYLSKLVLAFIFHFIGDPITYTVLFVEST 86
           +AL FL+YAWR+VL+ELSNWRK    I  FVG LSK  LA +FHFIGDPIT  +  VE+ 
Sbjct: 119 VALGFLVYAWRAVLFELSNWRKAAFAILAFVGDLSKFALALVFHFIGDPITSLISLVETA 178

Query: 87  VYAIHSFYSSIVTSAPIPQLTFIIMLASTVLAIGEAASPDSIKCQPYLLTAAGIIGYGAV 146
           +Y++ +FYS IV   P+ +LT +I+LAS+VLAIGEA +P+SI  QPY++T AG++GY AV
Sbjct: 179 MYSVRAFYSGIVAYTPVRELTTVILLASSVLAIGEAVAPESISKQPYVVTIAGLVGYAAV 238

Query: 147 RGFITEPVFLLMLVGLFSYSRFLKKRDNVCSALPIATVLASVGEPWVRIMAIISFTALAI 206
           + +I+EP F  +L+GL+ YSR +KKRD+V SALP A VLA VGEPWVR++AI  + ALA+
Sbjct: 239 QSYISEPFFWTVLLGLYGYSRLIKKRDDVTSALPSAAVLAGVGEPWVRVVAITGYLALAM 298

Query: 207 YHHSKNLKQVNEVSEVTSFRGKVPLPLLGVALAIGIRVAAKWAGYRHLTWMII 260
           YH+S    + +   E    R   P+PLL  ALAIG+R+AAKWAGYRHLTWMI+
Sbjct: 299 YHNS---TKTSSEEESQILRRAPPMPLLAAALAIGVRLAAKWAGYRHLTWMIV 348
The following BLAST results are available for this feature:
BLAST of Spo19390.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902037826|gb|KNA02683.1|2.0e-122100.hypothetical protein SOVF_2163... [more]
gi|731356094|ref|XP_010689490.1|2.8e-9779.8PREDICTED: uncharacterized pro... [more]
gi|645248274|ref|XP_008230221.1|2.4e-8064.8PREDICTED: uncharacterized pro... [more]
gi|595938078|ref|XP_007215629.1|2.7e-7963.9hypothetical protein PRUPE_ppa... [more]
gi|694320265|ref|XP_009350622.1|2.9e-7861.8PREDICTED: uncharacterized pro... [more]
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BLAST of Spo19390.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9Q7M2_SPIOL1.4e-122100.Uncharacterized protein (Fragm... [more]
A0A0J8BLS7_BETVU2.0e-9779.8Uncharacterized protein OS=Bet... [more]
M5X5M3_PRUPE1.9e-7963.9Uncharacterized protein OS=Pru... [more]
A0A059CDH9_EUCGR5.6e-7662.2Uncharacterized protein OS=Euc... [more]
F6HHK0_VITVI7.3e-7661.1Putative uncharacterized prote... [more]
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BLAST of Spo19390.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19390.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G28210.11.2e-7257.5embryo defective 1923[more]
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0006566 threonine metabolic process
biological_process GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine
biological_process GO:0008152 metabolic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006869 lipid transport
biological_process GO:0046907 intracellular transport
biological_process GO:0016482 cytosolic transport
biological_process GO:0006364 rRNA processing
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006544 glycine metabolic process
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006534 cysteine metabolic process
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0009821 alkaloid biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0016020 membrane
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009343 biotin carboxylase complex
cellular_component GO:0009507 chloroplast
molecular_function GO:0004121 cystathionine beta-lyase activity
molecular_function GO:0044540 L-cystine L-cysteine-lyase (deaminating)
molecular_function GO:0004123 cystathionine gamma-lyase activity
molecular_function GO:0080146 L-cysteine desulfhydrase activity
molecular_function GO:0015171 amino acid transmembrane transporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005488 binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004075 biotin carboxylase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0030750 putrescine N-methyltransferase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0030170 pyridoxal phosphate binding
RNA-Seq Expression