Spo19376 (gene) | SpinachBase

Overview


Name	Spo19376
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	DNA excision repair protein ERCC-1
Location	Super_scaffold_133 : 854529 .. 864606 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGCCCTAATTATTTTATTAACGCATTCGTTCAACCCCACCAATTTCTCTCCTTTCCCCCCCAAATTTTCCTACCAAATCCTACTAACACAATCCCAGAAAATCCCATGAAAAATGGAAGAAAACCAAATTGAAAGGAATAAGAAGAGCTCAATAGTGATAGAAATCCCATCATATAAAGAAGTTCTTGAGAACAATCAACAAAAATCAACCCAACCATCTCTCTTCATCCCATCTCAAACCTTCACTCAAACTTTCGCTTCCATAAAAAACTCCGAATTCTATACTCCACCCCCTCCTCCGAACACTTCTAATTCTCATTCTTTCTCCTCTTCAAATGCTGCTTCTTCGTCTTCCGCTGCGCCCTCTTCTTCCGGGTCTGTTAATTTAATCTGGGAATCCTTTTATTTTTGTGGCAATTGTTTGAATTGCGTTTAATTAGTTTGCTATTTGTGGGAATTGTTTGTATCTTGGGGTATTGTCTGAATTGAGTTTTATTTGATTATATTTTTGGTGGGAATTGGTTGATTGAGTTTGATTTGGTTTATTTTAATCTGTGATTTTGTGCTCCTGAGTTTAATTTTGTTGTTCATTTTGTTATTAGGCAAAATGCGGGTTCGACTAATTTTGTTCAGAAGACTAATGCTATCATTGTGAGCCAGAGGCAGGTATTCCTCTCTTTTTTTTCTTTTTTTTCCCCCAGTTTTTAGGATTCAAAATTGATGTATTTTTGCCTTTTTTGGTTTAAGTGTGTTGATAATGCTGTTAGTGTGGATTAGAATGTAATTGAGGTGAAGTATGAGGGACTTTTAGATAATTAAGAACGTGATTAGCTTGTGGCAAGTAGGAAACTTGTTAACCGTATACTCGGCAGAGATAGATAAGTAGTACTCCGTACTGTTATTGGAAAAGTGATGTTCTTTCTGTGTTTCATCGAAATGCTAATCATCACAATTTGTCTGGGGTTGAAGTTGATATAAACTTGGGTTCTGTGATTAGTTGAAATGCTAATAATGTTGAGCTTTCTAGGTTAGGTTTGATAGTGTGGATGGAAGAACTAAAATCAGGCTTTCTCTCTATTAAAAGAAATACTATTCGAGAAAATATAGAGAGCTATACAAACTTATGGCGAAGTTAAGTTGTTCTTACATGATGATTGGCTTTTTTATTTAGTTTTTACTCAAGAAAAGATATGTAGTTTCATGAAGTTTATATCTTATTTCTAATGTTTGTTCGTCATATTACTTCAGTCGTACTGAAGAAACGGGGTTATGTACATGAGAACCTCTTCAAATCAATGGGTAGAAGCAGGTCACTGTGAAGGAAGGAGATTAATGGCTGCACAATTTACTCAGAGAAAAAACTGGAGTGGTGATCGGTTGCGTCAGTGCATAATGTAGTTTGAAGTCATAGTGGGATGAGGAAGGGAAGGGTAAATTTCTGGTTTAGAATTTTTCATACAATAAGGAAGAGTAGCANGGGGGGGGGGGGGGGGGGGGGTAAGAGGAGGGATACTGTTTTTGGTTTTCAACTTAGCATTGTCAAGTCATGCTTNGGGGGGGGGGTAAGAGGAGGGATACTGTTTTTGGTTTTCAACTTAGCATTGTCAAGTCATGCTTTTATGACTCTCATATAATCATATCTGTGTCATCTGTGATTTTTGAACGTCTTTGTCAAAGAAGGGCTTGGGGTGGGGTGGGGGGAGGAGGAGTAATGATTTAAGAAAGTTAACAAGTATATCTCGGGCGATACATCGTTAGATACTCAGTTGACATCTTATAGATTAGTAGAGAAGAAAAGGAAGGTGATTGACTTACTTTTTTCTCTTCTTTCAAACCACATTCTTATGTATAAGCTACTATTATAGGTCTCTAGTATGCTTGGGTTGATATAAACTTACAGTAATTTATTCATTACCTTTGTTTGGCTGGAATGGGCTTCTGACTGATGTTTGCATTGCTTTATTTTTGTTTAACTAATATATTTTGCCTGTGTCCATCATTCCATCATGTTCTGGTCAAGTGTGCTGTTTTCTGAGAATGCTTGCTTAGTTACTGCCTAAGCTAACTGGAGATTTAGTTCTCTGGCTTTTAGTAGAATTACTCTTGCCCTTTATTTGCATTACTGAATTTACTGGGATCTGGGAGTTCACCTGTATTGAAGTGTTATGTGCTGACATCTTTTGAATCTTTGTAGTTTATAGTAGTTACTAAGTGGTTTTCTAGCTTATTGTTGTCATTATTAACTTCACTTATCAATATCCTTTTGCAGAAAGGAAATCCTCTGCTCAAGCACATCAGAAATGTAAGGTGGAATTTCGCAGAAGTTATTCCTGACTATGTTCTGGGGCAGAATTCTTGTGCTCTTTATTTAAGGTTGGTTTAAAACTCTGCTGCCTTATATGCAAATCTTCTCTTGAGAAATACCCTTGGAAAGTCTAAGGTGGTGTTTGGTAGAGTTTAGTGACTAATAAAAGTTGCTTGTAATTGTCGTTGCTTACGAATAATTATTGATTGTTACGGTTTGATTTATATTCTCATTGTTTGTGCAATGAAGTTACCTTCAGGAAAAGAAAGTTGATCTTTAACATTTTCTTGGTTAGTTTGGTACACCGTAATACCTGTTTTCTCAATATTATAATATTGGCAAACGCTTAATGTTTTTTTGGTCGGTAAGTGAAGATATATTTTTCAACTAAAAAATTACAACCTAAGGATCAACAGGAAACAAGCTTCGTTTCAAGATACTCTGTCATCTCCAGCCAAACAGGCTCAAAGAATACAAAGAAAGCAAAGGAATTACACAATCCAGCTAGAGTGCTAAGACAACTAAACAAATACTCCCTCCGTTCCTAAATAAGTGTCAACTTTGAGAGAATTCACGGTAATTAAGAAAACTGAAAAGTGTGTAAGAAAAACAATGATTGAGAGTGGTTTTTTGGGGAAGGCATAAAGTAGATAATTGTTTATTGATAAAGTACAAATAAAAGTGGATGTGGGGATGGAAAAGTGGGAAAAGTGTGAATTTGTAAGAAAAAACAATAATGATTTATGGAAAAGTGGGAAAAGTGTATGTCCAAAAATAGAAAGTGGACACTTATTAGGGAACGCCCAAAATAGAATAGTGGCAGTTGTATAGGAATGGAGGGAGTAACAGATTATCTAGCTATTCCTATCGACCTGAGATACCTTCTTCCATATGATGCATTTAATTCTACTAGTTTGACTGTTCTTAATCTCTGAGATCACATACTGGATAGAATCCACCTTCATGCGCCTTAGTGCTAAATTTCTAGCATTCCATGTCCGGTAACAGTAGCAGCTACTGCAGCCAACTGTACCATTCTTCCTCAATTTGGAATTTCTTGCTCTGTGAATCTATCTAATAAGCACTTATGCATCTGTAGTTCTTGCACCAACTCCCATCCACCTTTTACTCTCCTAAATCCACTGTCTGCTAAATTTATAGATAATGATTGTGAGACATACCAATCTCTGTCAGAAATAGCACAGTTTTCAGTGCCATTAATGTGAAGCTTGAATTACTGTCTTGTTTGCAGCCTTCCTAGCATGAAAGCCATTAGAAAAATCTGTGTTTAGGCATAGGAAAGCAAGCCTATTCCACACAAACTTGGCCCATTACTGCTTTTGTTGAGGACATAGGAGCTTAGTGTACATTCTCGGAATTTTGTATATAGACTCACTCAACCATTGATCATTCTGCATATCCAATCTAATTTCATTTTTAAACCCGGAAAATACACTTCCAAGATTACCTAGCATTACTAATAGCCTTGTACTCTACACAATCTCTGTCTTTAGTATACATAGCATGAACCCATCTAACCCACAGGTTATCAGCTTTCTTAGCATCCCATACTTGCTTCCCATTGCAGCCCTATTCCATAGCTTAATGTTTCTCACTCCCAAAGCTCCACCATTATGCTCACATACTCTATCCCAGGCTGCATAGCCTGGTTTATTGCTATCATATTGTCCTGACCATAAGAAATCCATGCAAACAACATTTATCTTTTTCAGAACAGCCTTGGGCAAAGTAAGTACTTGCCCCCAGTATTCATTGACTCTCATAAGCACTAGATTCACCAATTGTAACCTTCCAGTAAAGGATAAATGCCTTGAGCTCCATGTCTTAATTCTAGCATCATTCTTTCAATCATGTTCACAATCATATCGCTTAGTTAGCTCTTTTGGACTGACAGGAACCCCTGAATGGTAATGAACCCGTTCGAAATCCAGAAATTTTAGCAATCAGGTTGATATCATCCTGCACCATTCCACGGGAATAGAAAGAAGACTTCCCCTTATTTTCACATGATCCAGTTGTAGCAGAAAATAACTTGATTTTCCTGAGCCCAACCAACATCATCTTCACAGAAGTAAGATCACCTTTCCAAAACAAGATCAAATCATCTGTATGATTTTATTTGAGGGGTCTGCATCTGGAGTGATACTTAAAATCCTTTGGCTTCCCAATATATCTCATAATTTCCGGCTAAGTATTCCCTGCAGAGGACAAAGAGCAAGGAGGGCATTGGGTCTCCCTGCCTTGGACCCCTTTTGTAATTAAAGAAGCCAGTTGGTGAGCCATTTAACATAAAGTAAACCTAGGACTTCTCACACACATGATGATCAGATAAGGGGCTGTTTGGTTCTTGGGAAGGGAAAGGAAAGGATTGAGAATGAGAAAGAAAAGGAAATAATTGATTCACCCCTGATTCCCTTACATGTTTGGTTGACCGCACGACCGCCTCTCCCCCACCTCCACAACAATCACATCTCCACTTCTTTCCACCGCCTTTCCACCATGAATAAGAGCTTTGTGGTCGAATTGCACCATTAGAGCCATGAACCACGTTATTAATGTTTAAGTCTGTCTATTTTTCAATAATTGTCTATCTTTCTCAAATTTTCAACAGCGATGATAAATGGCTTGTGGGGTTGGTGGCTAAATGGTTATGGAGTGGTTAGTGTTGGTGGCTAGGGCTAAGACCTAAGGGTGTTAGGGGCTGGTGGTGCTGTAAGATGGTGACCATTGTCATTGTGTGTGTAGAGGTGAACGGGGGAAACCTCAAGTCCCAGGTTAGAGTAGAGAATCAGATTAGAGGGGGTTTGGTGAATTCCAAAATGATAAGGGGGGAAAGGGAAACTAAAAAAACGCGTACCAAACAACTACTAAGGGAAACAGGGATTCTAGTTCCCTTTCTCGATTCCCCTCAACCAAACAACCCCTAAGTCCTATAAGCAATTTCTGAAGGAAACCCCACTCCACTGTGTCATAGTCTTTCTGAACATCAGCTTTTAACGTGCAACATTTAGTCTTCGCTTCTTCTGTACATTTTGACCAAATCTTGACATATTTGAACACTATGAAAAAATGAAGAATACTTCTCTCTATAATGAAAGCTCCATGAGTTTCAGATCCCACCTCATTGAACATTAAACTCAGCTTTCTCATAAGAAAATGGCCTAAAGCCCCCTGCATTATTAGGACCTAATATTATCTTCCGCATACCTGTTCTTCTCAACATAGTATTGGCAGATGTCGCGACTCATGAGTTCCGTCAGCCTTCTTATGTGACAAGGCATATGTTGTTTGTTGTTTGCTGACTAATCTGAAAGGAATTTATGCAAAATATTTGTTTTTTCTATTATCTTTTATCAATTGTATAAATGAAATGCCGCCTTGTATTTGACATCGTGCAGTCTCCGTTATCACTTGCTTCATCCAGACTATCTTTATTTTCGCATAAGAGAAATGCAAAAGAACTTCAGACTTCGTGTGGTACTCTGCCATGTTGATGTGGTGAGCTACTAGATTGACTCGTTAATTCTGTCATTTCTGTAAGGTGGCTCTCCGTGATCAGTACTATAAGGAATATAAAACTTATTTAGCAGTGCCAATATCATATATTACGTTTGCTGTAATATTTGTGTTTTGATTGTGTTTTTCAGGAGGATGTAGTCAAGCCTTTACTTGAAGTCACAAGAACATGTCTGCTTCATGATTGCACTCTTCTCTGTGCTTGGAGGTAAAAATAAACACTTTCTTGAAGCATATTCTTCTAAAATTCTTTAGGGAAGTTATATGACTGATTTTTGGTGTATCATTTTTTCTGGATTCCATTGTTTTGGAGCTGTTTCTTTTTATGGGATGATAAATTTTGAAACCTTGCATGGCTAATGTGTGTCATGACCAGCAAAAGTTCATTTCGCCTTATTAACAAATCGCGGCACCTTTGCATAACCTGTTAAACAAAATCTTCAATATTTGATGTATCTTGATCAACATATGTAGTTTCATACTAATGTTGCTTTATTATTTTCCTGCTGTTTATCTTCATTATGCATTTTAGCTTGGAAGAGTGTGGACGATACCTAGAAACGATTAAAGTCTATGAGAACAAGCCAGCAGATATCATTCAAGGACATATGGACTCTGATTATTTATCAAGGGTATGTACCGTCTAGCACAGGTCTCTCCTCAAATTAGTATTTTATGTTCCATGTATATTATGTGGCGGAGTTAAAAGGCTTTTAGTTGCTGTCTTTTGAACATTGTGTTACTCTTTTTTGAAAGAAAATAATGAAGCGGAGTGATGTTTGTTGCACCCGAATTTTAATGAAGCTTTTGCTGGTTGCAGCTGAATCATGCCCTTACTGCAGTTCGACATGTTAATAAAACTGATGTAGTCACGCTTGGTTCCACATTCGGGGTAGGCAAGATGATTAACTTTGCTTTTGGTAAATTCTTTTGGAAGGTAGTTTCCTAATGGTTTTATGATTTTTATAGTCTCTTTCTCATGTCATGGATGCTTCTATGGAAGATCTAGCTCGTTGTCCTGGCATTGGCGAGCGCAAGGTACTTTCAAGTCTCACCAATAATTTTCATAGTCTTGATCCATTGTAAAATCAGAACAGGCTTTTATCTCCAACTCTCAAATTTCCCCGAATTAGTTTGCAGTTTTATCAACATTTTTCTCGGCATTCATTTTTTTAGTCCGAATCTTGAAGGCACAAACGACAAACTTATCTTGCTGATGAATCAGGTAAAACGTATGTACGACACCTTTCATGAACCCTTCAAACGCGTTACGCCAAACCGCTCTGAAGCTCCTGTGCAGAATGATCCAACTCCAGCCTCCTTTGATGGTGAACCACCAGCTGTTGAAAAGGAAACAGAAGAAACTAGCAAGCGCCAGAAAAAAGACCCAGAAGTGATCTTAAAATCAGCTTTGTCTGTGGCATTTGCAAAATATTCAGACAAACTTAGTAAGAAAAACACTCCATCAGAAAAGGAAAGTGGTGAAGGCTCTATCATCCAAAAAGAATCAGAAGCCGATTTACAAATTTGAAGTCGGAAACTTTTCACGCCCAAAATTTCTCTAGGTGACGGAGCCTTGGAAATCCCCAAGAATGTTTTCATGGTAATTTAAAAACAAATTTTACTTCTGAGAGCATAACCAAATTTGTGTTTTGGATTGTGCAGCAGGTTTCTTTTCTGGACTGATAATAATAGTTCTCGTGTTCTTTTTGTGTTAGTGTTTTAGCTCGGATTATGTTAGTTGATGGAAACATGAGTTATAGGGAAATAGTGCATCTTTCCAAATGTAAATGTAGTCTTAGAGAGTTACACTCCTAGGTACTTTGCTTTAGGTCATTTTAGCAGAAAACAAGCTGCACGATGCATTTAGAGCTCATGACATGATCATAAATTCATAATAGTGGCAAATGGCAATGACATTTTACATGACTCAAATTGTAAATGTAGCATTTTACACAGTATGATTTTTTCTCCCAATGTAAGTTGTGTAATACTCCCTTTGCTGCTAAATAATACAGAATCTCTCGCAATTGGTTTGGGGTGGTTATTTCTAAGGATGTGAATTAAAATTCCATAATTATCCATTTATCTTGTACAGTTTAACATCGTTACCATACAAGTATAGCACCTATAGAGTTTATCCAATGTTGTATTTTAGCTTATTATATCTGTTTTGTTCACTGTAAAATAAACACTAGCTTTAGGCGTATTCGGGAACATTGTGGTGTTCAGTCATAAAAGTCATGAAACAAGATGATTATTTTGAATTGGTTTGCAGGAGATCCAAATGAATAAAGGTTATGACATATTTGCTTGTAACCACAGATATATTCACTTTGTCTTCTCTTTTGGATTACTCACTCCCACTTGTTAGTTGTTACCGACATGTTACCCGGCATTTTGTCATTATCATGGTTGGTTTGGTCAGTTAATTTTTTTATTTTACAGTTTCACTATGATGCTCTCAAGTAAATCCTTGGTAGATATTTCATTTCAGTACCTTAAGGTTATTCCTAGAGGCTTGCTTTATCAGTAGTCATCATACGTGCATGATAATGGTGCATTTTGAAGACAACTACTATAACAAAGCAACACCACGCGTAAAACTCGTGGTTGTCGTTGCTTTGTTACATCGATTGTCTTCAATAGAAAACCGTACCATTTTTATAATGGCGCGTTACAACATTTATCTTAAACACAAAGGTATCTTCTCTGTAAATTGCATTTTCGACACAGAATTTACCGCTTGTACTTCCAAAGTGCCGACAGTTTTTCACAGCAAAAATTACTTCCGGATTCATCTGTGTTTGCAGTCAGTGAATTCCTTTGTTTCTCATTAAAGTCGAATACAGAGACGAACAACCGTGGTTCATTGTTTGTTTTCATTAGACATATTACATGTGTCAGATTGATTGCACTTGTTTGTTATAAGTTTTAGAACCAGCATTGTAGCCTTTTATGTGCTAACTGCCAGTCCTATTTTCCCGCTAAAATTAATAATTGTAGTAAATGAATTGAACTGCTATATACTTACTCCGTACTCTTTCCTTGTCTGCATGTAGGGACTAAAAAACATGGCAAAGCTGTATTTATTCAAGATTCTTCTGGTGAAATTTTTGGTAAGATTGAGATCTGACCATCACAATTTGATATAAGTGACAAATTTTCCCCTGATAATTCATTAAAATGACAAATTTCCCCTGATAATTTGACATAAATGACAAGTATAGGAAAGGATTTTTTTTTCTTTAACTTTTTCTCCATCCCCTAGATCATCTCATTACAGATTTCAGAAATTATTGTGCAAAGAAAAATGTGAATTACGAATTGGAATATTTTCGAGTTATTCTATTTGGTTTCGAGTGTAATTGGGTTCGTTCAGGTCATGTTACATTTTGTGCCAATTCTCAATTATCTTATTATGATTGGTTAATCTACACTAATTGTCTTGTGAGGTCGGTTTTGGTTCAAGTCTGGTTTGTGTAATTGCGGGTACATTTCATATTTAAGTCGGGTAATCAAGTATGAATCATGACGAGTGACCCTCATAGTTAATATATGAATCGTGCAAGCCTATGCACCCATTCCCCTCATTCCCAGTTTCGTGTACGTAGTTAATCGTGTGCTTATTTCATAGATATATTTTACTCCTAAGATATAAGGTCAGAATTATTCGCTCCTCTTATTTGCATCAAAGCCATTAAGAAGTCCTTGCGTTACGTGGTAAATAAAAATTAGGCAACCCTCATTACATTTGTGAATTTGAGATGCAAATAAGATTGTCTTATGCATATTAGTGTTTGCTCCTCTTGCAGGTAAACTAAAACAAATTGCTTTAAGAAACGTAAACTCAGACAACCATAAGTGCTGGAGGTAATCTTCCACGAAATTTTTATTATTCTATAGTGAAACAAAAGCTTATTGAATGATAAACTATAGAAGTATTCTACAATTCATTTAAACAGCATTAGGTTTTCAGATAACACAACTTGTTCTTCTGATAACCTTTTTTTTTTGTTATTCTGATAACTTGATGTTTTGATCTAACTTCTTTCCAAGTACATGGAAACCTATACCGCGAATTATTCCTGAATTTGAAACGCATGTAATGTCATGCTGCTGTTTGATCTGTTTGCTTCTCTTCTTAATTCACTGATGCAATGTGAACCTTTTCAACCAATTTATTTGAAATTGTTCCCTCGTTCATGTCTTTGCATCCCAATTTAAATCCTG

mRNA sequence

TTTTGCCCTAATTATTTTATTAACGCATTCGTTCAACCCCACCAATTTCTCTCCTTTCCCCCCCAAATTTTCCTACCAAATCCTACTAACACAATCCCAGAAAATCCCATGAAAAATGGAAGAAAACCAAATTGAAAGGAATAAGAAGAGCTCAATAGTGATAGAAATCCCATCATATAAAGAAGTTCTTGAGAACAATCAACAAAAATCAACCCAACCATCTCTCTTCATCCCATCTCAAACCTTCACTCAAACTTTCGCTTCCATAAAAAACTCCGAATTCTATACTCCACCCCCTCCTCCGAACACTTCTAATTCTCATTCTTTCTCCTCTTCAAATGCTGCTTCTTCGTCTTCCGCTGCGCCCTCTTCTTCCGGGCAAAATGCGGGTTCGACTAATTTTGTTCAGAAGACTAATGCTATCATTGTGAGCCAGAGGCAGAAAGGAAATCCTCTGCTCAAGCACATCAGAAATGTAAGGTGGAATTTCGCAGAAGTTATTCCTGACTATGTTCTGGGGCAGAATTCTTGTGCTCTTTATTTAAGTCTCCGTTATCACTTGCTTCATCCAGACTATCTTTATTTTCGCATAAGAGAAATGCAAAAGAACTTCAGACTTCGTGTGGTACTCTGCCATGTTGATGTGGAGGATGTAGTCAAGCCTTTACTTGAAGTCACAAGAACATGTCTGCTTCATGATTGCACTCTTCTCTGTGCTTGGAGCTTGGAAGAGTGTGGACGATACCTAGAAACGATTAAAGTCTATGAGAACAAGCCAGCAGATATCATTCAAGGACATATGGACTCTGATTATTTATCAAGGCTGAATCATGCCCTTACTGCAGTTCGACATGTTAATAAAACTGATGTAGTCACGCTTGGTTCCACATTCGGGTCTCTTTCTCATGTCATGGATGCTTCTATGGAAGATCTAGCTCGTTGTCCTGGCATTGGCGAGCGCAAGGTAAAACGTATGTACGACACCTTTCATGAACCCTTCAAACGCGTTACGCCAAACCGCTCTGAAGCTCCTGTGCAGAATGATCCAACTCCAGCCTCCTTTGATGGTGAACCACCAGCTGTTGAAAAGGAAACAGAAGAAACTAGCAAGCGCCAGAAAAAAGACCCAGAAGTGATCTTAAAATCAGCTTTGTCTGTGGCATTTGCAAAATATTCAGACAAACTTAGTAAGAAAAACACTCCATCAGAAAAGGAAAGTGGTGAAGGCTCTATCATCCAAAAAGAATCAGAAGCCGATTTACAAATTTGAAGTCGGAAACTTTTCACGCCCAAAATTTCTCTAGGTGACGGAGCCTTGGAAATCCCCAAGAATGTTTTCATGGGACTAAAAAACATGGCAAAGCTGTATTTATTCAAGATTCTTCTGGTGAAATTTTTGGTAAACTAAAACAAATTGCTTTAAGAAACGTAAACTCAGACAACCATAAGTGCTGGAGGTAATCTTCCACGAAATTTTTATTATTCTATAGTGAAACAAAAGCTTATTGAATGATAAACTATAGAAGTATTCTACAATTCATTTAAACAGCATTAGGTTTTCAGATAACACAACTTGTTCTTCTGATAACCTTTTTTTTTTGTTATTCTGATAACTTGATGTTTTGATCTAACTTCTTTCCAAGTACATGGAAACCTATACCGCGAATTATTCCTGAATTTGAAACGCATGTAATGTCATGCTGCTGTTTGATCTGTTTGCTTCTCTTCTTAATTCACTGATGCAATGTGAACCTTTTCAACCAATTTATTTGAAATTGTTCCCTCGTTCATGTCTTTGCATCCCAATTTAAATCCTG

Coding sequence (CDS)

ATGGAAGAAAACCAAATTGAAAGGAATAAGAAGAGCTCAATAGTGATAGAAATCCCATCATATAAAGAAGTTCTTGAGAACAATCAACAAAAATCAACCCAACCATCTCTCTTCATCCCATCTCAAACCTTCACTCAAACTTTCGCTTCCATAAAAAACTCCGAATTCTATACTCCACCCCCTCCTCCGAACACTTCTAATTCTCATTCTTTCTCCTCTTCAAATGCTGCTTCTTCGTCTTCCGCTGCGCCCTCTTCTTCCGGGCAAAATGCGGGTTCGACTAATTTTGTTCAGAAGACTAATGCTATCATTGTGAGCCAGAGGCAGAAAGGAAATCCTCTGCTCAAGCACATCAGAAATGTAAGGTGGAATTTCGCAGAAGTTATTCCTGACTATGTTCTGGGGCAGAATTCTTGTGCTCTTTATTTAAGTCTCCGTTATCACTTGCTTCATCCAGACTATCTTTATTTTCGCATAAGAGAAATGCAAAAGAACTTCAGACTTCGTGTGGTACTCTGCCATGTTGATGTGGAGGATGTAGTCAAGCCTTTACTTGAAGTCACAAGAACATGTCTGCTTCATGATTGCACTCTTCTCTGTGCTTGGAGCTTGGAAGAGTGTGGACGATACCTAGAAACGATTAAAGTCTATGAGAACAAGCCAGCAGATATCATTCAAGGACATATGGACTCTGATTATTTATCAAGGCTGAATCATGCCCTTACTGCAGTTCGACATGTTAATAAAACTGATGTAGTCACGCTTGGTTCCACATTCGGGTCTCTTTCTCATGTCATGGATGCTTCTATGGAAGATCTAGCTCGTTGTCCTGGCATTGGCGAGCGCAAGGTAAAACGTATGTACGACACCTTTCATGAACCCTTCAAACGCGTTACGCCAAACCGCTCTGAAGCTCCTGTGCAGAATGATCCAACTCCAGCCTCCTTTGATGGTGAACCACCAGCTGTTGAAAAGGAAACAGAAGAAACTAGCAAGCGCCAGAAAAAAGACCCAGAAGTGATCTTAAAATCAGCTTTGTCTGTGGCATTTGCAAAATATTCAGACAAACTTAGTAAGAAAAACACTCCATCAGAAAAGGAAAGTGGTGAAGGCTCTATCATCCAAAAAGAATCAGAAGCCGATTTACAAATTTGA

Protein sequence

MEENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPPPPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKHIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRVTPNRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYSDKLSKKNTPSEKESGEGSIIQKESEADLQI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19376.1	Spo19376.1	mRNA

Homology

[Close]

BLAST of Spo19376.1 vs. NCBI nr
Match: gi|902192315|gb|KNA12015.1| (hypothetical protein SOVF_129660 [Spinacia oleracea])

HSP 1 Score: 744.2 bits (1920), Expect = 1.100e-211
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 1


		  
Query: 1   MEENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPP 60
           MEENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPP
Sbjct: 1   MEENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPP 60

Query: 61  PPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKHIRN 120
           PPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKHIRN
Sbjct: 61  PPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKHIRN 120

Query: 121 VRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDV 180
           VRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDV
Sbjct: 121 VRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDV 180

Query: 181 VKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHA 240
           VKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHA
Sbjct: 181 VKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHA 240

Query: 241 LTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRVTP 300
           LTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRVTP
Sbjct: 241 LTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRVTP 300

Query: 301 NRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYSDKLSKK 360
           NRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYSDKLSKK
Sbjct: 301 NRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYSDKLSKK 360

Query: 361 NTPSEKESGEGSIIQKESEADLQI 385
           NTPSEKESGEGSIIQKESEADLQI
Sbjct: 361 NTPSEKESGEGSIIQKESEADLQI 384

[Close]

BLAST of Spo19376.1 vs. NCBI nr
Match: gi|731366404|ref|XP_010695052.1| (PREDICTED: DNA excision repair protein ERCC-1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 596.3 bits (1536), Expect = 3.900e-167
Identity = 316/390 (81.03%), Postives = 338/390 (86.67%), Query Frame = 1


		  
Query: 1   MEENQIERNK---KSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFY 60
           MEE++ ER K   KSSIVIEIPSYK+VLENNQ KST PSLF PSQTF+Q F+SIK SEFY
Sbjct: 1   MEEDRQERQKETKKSSIVIEIPSYKDVLENNQPKSTAPSLFTPSQTFSQAFSSIKKSEFY 60

Query: 61  TPPPPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKH 120
           +PPP    SNSHS SSSNA        SSS Q   ST  VQK+NAI+VS RQKGNPLLKH
Sbjct: 61  SPPPSLPPSNSHSLSSSNA--------SSSRQIEVSTTPVQKSNAILVSHRQKGNPLLKH 120

Query: 121 IRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDV 180
           IRNVRWNFAEV+PDYVLGQNSCALYLSLRYHLLHPDYLY+RIRE+QKNFRLRVVLCHVDV
Sbjct: 121 IRNVRWNFAEVVPDYVLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFRLRVVLCHVDV 180

Query: 181 EDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRL 240
           +DVVKPLLEVT+TCLLHDCTLLC WS+EECGRYLET+KVYENKPADIIQGHMDSDYLSRL
Sbjct: 181 DDVVKPLLEVTKTCLLHDCTLLCGWSVEECGRYLETVKVYENKPADIIQGHMDSDYLSRL 240

Query: 241 NHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKR 300
           NHALT VRHVNKTDVVTLGSTFGSLSH+MDASMEDLARCPGIGERKVKR+YDTFHEPFKR
Sbjct: 241 NHALTGVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 300

Query: 301 VTPNR---SEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYS 360
           V P+R    EAP+QNDP   S + E PA EKETE+TSKRQKKDPEVILKSALSVAFAKYS
Sbjct: 301 VAPSRPVAPEAPLQNDPCHGSLESEVPAAEKETEDTSKRQKKDPEVILKSALSVAFAKYS 360

Query: 361 DKLSKKNTPSEKESGEGSIIQKESEADLQI 385
           DKL KK + SEKE GE S IQKE EAD QI
Sbjct: 361 DKLGKKKSQSEKEIGESSDIQKELEADSQI 382

[Close]

BLAST of Spo19376.1 vs. NCBI nr
Match: gi|645222268|ref|XP_008246509.1| (PREDICTED: DNA excision repair protein ERCC-1 isoform X2 [Prunus mume])

HSP 1 Score: 489.6 bits (1259), Expect = 5.100e-135
Identity = 261/388 (67.27%), Postives = 313/388 (80.67%), Query Frame = 1


		  
Query: 3   ENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPPPP 62
           E+   +NKK + VI+IPS++EVLE++Q KST  SLF PSQ+F+Q FA +K+SEFY+PPPP
Sbjct: 11  ESDQNKNKKKT-VIKIPSFQEVLESSQSKSTPQSLFTPSQSFSQAFAFVKSSEFYSPPPP 70

Query: 63  PNTSNSHSFSSSNAASSS---SAAPSSSGQN---AGSTNFVQKTNAIIVSQRQKGNPLLK 122
           P TS+    +S    SS    S  PSSS      A S++  Q+ NAIIVS RQKGNPLLK
Sbjct: 71  PATSSQPLQASDTGNSSKTGQSDVPSSSAPTNAVASSSSPAQRRNAIIVSHRQKGNPLLK 130

Query: 123 HIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVD 182
           HIRNVRW FA+++ DY+LGQ+SCALYLSLRYHLLHPDYLY+RIRE+QKNF+LRVVLCH+D
Sbjct: 131 HIRNVRWEFADIVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHID 190

Query: 183 VEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSR 242
           VEDVVKPLLEVT+T LLH+CTLLC WSLEECGRYLETIKVYENKPADIIQG MD+DYLSR
Sbjct: 191 VEDVVKPLLEVTKTALLHECTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSR 250

Query: 243 LNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFK 302
           LNHALT VRHVNKTDVVTLG+TFGSLSH+MD SMEDLARCPGIGERKVKR+YDTFHEPFK
Sbjct: 251 LNHALTTVRHVNKTDVVTLGTTFGSLSHIMDVSMEDLARCPGIGERKVKRLYDTFHEPFK 310

Query: 303 RVTPNRSEAPVQNDPT---PASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKY 362
           RV  +R   P  + P+   P S D E    E ETE+ SKR+KK+PE+ +KSALSVAF+KY
Sbjct: 311 RVVASRPAVPETSAPSNAEPGSVDEEDKEAE-ETEDESKRRKKEPELTVKSALSVAFSKY 370

Query: 363 SDKLSKKNTPSEKESGEGSIIQKESEAD 382
           +DK++KKN+ +++E    +    E+E +
Sbjct: 371 ADKVNKKNSKTQREEKGETSAAMEAETE 396

[Close]

BLAST of Spo19376.1 vs. NCBI nr
Match: gi|702448750|ref|XP_010025163.1| (PREDICTED: DNA excision repair protein ERCC-1 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 486.1 bits (1250), Expect = 5.600e-134
Identity = 258/385 (67.01%), Postives = 311/385 (80.78%), Query Frame = 1


		  
Query: 2   EENQIERN-KKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPP 61
           E++ ++R   ++  VI+IPSY+EVLE++Q KS  PSLF PS +F+Q F+ +K+SEFY+PP
Sbjct: 9   EDDHLQRRPNRTKTVIKIPSYQEVLESSQSKSAPPSLFTPSPSFSQAFSFLKSSEFYSPP 68

Query: 62  PPPN----TSNSHSFSSSNAASSSSAAPSSSGQNAGSTN----FVQKTNAIIVSQRQKGN 121
           PPP     T    + S+++AA+S+ +   +SG  AGS++      Q  NAI+VS RQKGN
Sbjct: 69  PPPPPPPATPPPPAASAASAAASTWSVAGTSGAVAGSSSKSSFAAQSRNAILVSPRQKGN 128

Query: 122 PLLKHIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVL 181
           PLLKHIRNVRW FA+++ DY++GQNSCALYLSLRYHLLHPDYLY+RIRE+QKN++LRVVL
Sbjct: 129 PLLKHIRNVRWAFADIVCDYLIGQNSCALYLSLRYHLLHPDYLYYRIRELQKNYKLRVVL 188

Query: 182 CHVDVEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSD 241
           CHVDVEDVVKPLLEVT+T LLHDCTLLC WSLEECGRYLETIKVYENKPADIIQG MD+D
Sbjct: 189 CHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTD 248

Query: 242 YLSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFH 301
           YLSRL HALT VRHVNKTDVVTLGSTFGSLSH+MDASMEDLARCPGIGERKV+R+YDTFH
Sbjct: 249 YLSRLTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFH 308

Query: 302 EPFKRVTPN----RSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSV 361
           EPFKRV PN      EAPVQ +  P S   +   V+ +  +TSKRQKK+PE+ +KSALS 
Sbjct: 309 EPFKRVVPNVAAAAPEAPVQKNAEPGSISEDQEIVD-DVAQTSKRQKKEPELTVKSALSA 368

Query: 362 AFAKYSDKLSKKNT-PSEKESGEGS 373
           AFAKY+DK+ K+NT P +   GE S
Sbjct: 369 AFAKYADKIGKRNTRPLDGRGGEPS 392

[Close]

BLAST of Spo19376.1 vs. NCBI nr
Match: gi|590643818|ref|XP_007030907.1| (DNA excision repair protein ERCC-1 isoform 1 [Theobroma cacao])

HSP 1 Score: 485.0 bits (1247), Expect = 1.300e-133
Identity = 260/385 (67.53%), Postives = 311/385 (80.78%), Query Frame = 1


		  
Query: 3   ENQIERN---KKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTP 62
           ENQ E +   +K+ IVI IPSYKEV+E++Q KST PSLF PSQ+F+Q F  IK+SEFY+P
Sbjct: 5   ENQREEHQNKRKTPIVIGIPSYKEVIESSQIKSTPPSLFTPSQSFSQAFNFIKSSEFYSP 64

Query: 63  PPPPNTSNSHSFS-----------SSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQR 122
           PP P   +S + S           SS+AA+++++A +S    + S+N  Q  NAI+VS R
Sbjct: 65  PPAPPAPSSAAISTPRPVGEANVPSSSAAAAAASASASPVAASSSSNSSQSRNAILVSHR 124

Query: 123 QKGNPLLKHIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRL 182
           QKGNPLLKHIRNVRW FA+++ DY+LGQNSCALYLSLRYHLLHPDYLY+RIRE+QKNF+L
Sbjct: 125 QKGNPLLKHIRNVRWAFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 184

Query: 183 RVVLCHVDVEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGH 242
           RVVLCHVDVEDVVKPLLEVT+T LLHDCTLLC WSLEECGRYLETIKVYENKPAD+IQG 
Sbjct: 185 RVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQ 244

Query: 243 MDSDYLSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMY 302
           MD+DYLSRLNHALT +RHVNKTDVVTLGSTFG+L+ +MDASMEDLARCPGIGERKVKR+Y
Sbjct: 245 MDTDYLSRLNHALTTIRHVNKTDVVTLGSTFGTLASIMDASMEDLARCPGIGERKVKRLY 304

Query: 303 DTFHEPFKRV---TPNRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSA 362
           DTFHEPFKRV    P   E P+  +  P S   E    EK+TE+TSKR+KK+PE+ +KSA
Sbjct: 305 DTFHEPFKRVISSNPPVPETPILKEAEPCSAS-EATEAEKDTEDTSKRRKKEPEMNVKSA 364

Query: 363 LSVAFAKYSDKLSKKNTPSE-KESG 370
           L+ AFA+Y+ K+SKK+T S+ KE G
Sbjct: 365 LTAAFARYAGKISKKSTKSKGKERG 388

[Close]

BLAST of Spo19376.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_129660 PE=4 SV=1)

HSP 1 Score: 744.2 bits (1920), Expect = 8.000e-212
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 1


		  
Query: 1   MEENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPP 60
           MEENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPP
Sbjct: 1   MEENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPP 60

Query: 61  PPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKHIRN 120
           PPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKHIRN
Sbjct: 61  PPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKHIRN 120

Query: 121 VRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDV 180
           VRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDV
Sbjct: 121 VRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDV 180

Query: 181 VKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHA 240
           VKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHA
Sbjct: 181 VKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHA 240

Query: 241 LTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRVTP 300
           LTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRVTP
Sbjct: 241 LTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRVTP 300

Query: 301 NRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYSDKLSKK 360
           NRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYSDKLSKK
Sbjct: 301 NRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYSDKLSKK 360

Query: 361 NTPSEKESGEGSIIQKESEADLQI 385
           NTPSEKESGEGSIIQKESEADLQI
Sbjct: 361 NTPSEKESGEGSIIQKESEADLQI 384

[Close]

BLAST of Spo19376.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E498_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g097200 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 2.700e-167
Identity = 316/390 (81.03%), Postives = 338/390 (86.67%), Query Frame = 1


		  
Query: 1   MEENQIERNK---KSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFY 60
           MEE++ ER K   KSSIVIEIPSYK+VLENNQ KST PSLF PSQTF+Q F+SIK SEFY
Sbjct: 1   MEEDRQERQKETKKSSIVIEIPSYKDVLENNQPKSTAPSLFTPSQTFSQAFSSIKKSEFY 60

Query: 61  TPPPPPNTSNSHSFSSSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKH 120
           +PPP    SNSHS SSSNA        SSS Q   ST  VQK+NAI+VS RQKGNPLLKH
Sbjct: 61  SPPPSLPPSNSHSLSSSNA--------SSSRQIEVSTTPVQKSNAILVSHRQKGNPLLKH 120

Query: 121 IRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDV 180
           IRNVRWNFAEV+PDYVLGQNSCALYLSLRYHLLHPDYLY+RIRE+QKNFRLRVVLCHVDV
Sbjct: 121 IRNVRWNFAEVVPDYVLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFRLRVVLCHVDV 180

Query: 181 EDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRL 240
           +DVVKPLLEVT+TCLLHDCTLLC WS+EECGRYLET+KVYENKPADIIQGHMDSDYLSRL
Sbjct: 181 DDVVKPLLEVTKTCLLHDCTLLCGWSVEECGRYLETVKVYENKPADIIQGHMDSDYLSRL 240

Query: 241 NHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKR 300
           NHALT VRHVNKTDVVTLGSTFGSLSH+MDASMEDLARCPGIGERKVKR+YDTFHEPFKR
Sbjct: 241 NHALTGVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 300

Query: 301 VTPNR---SEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKYS 360
           V P+R    EAP+QNDP   S + E PA EKETE+TSKRQKKDPEVILKSALSVAFAKYS
Sbjct: 301 VAPSRPVAPEAPLQNDPCHGSLESEVPAAEKETEDTSKRQKKDPEVILKSALSVAFAKYS 360

Query: 361 DKLSKKNTPSEKESGEGSIIQKESEADLQI 385
           DKL KK + SEKE GE S IQKE EAD QI
Sbjct: 361 DKLGKKKSQSEKEIGESSDIQKELEADSQI 382

[Close]

BLAST of Spo19376.1 vs. UniProtKB/TrEMBL
Match: A0A059B7W6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04470 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.900e-134
Identity = 258/385 (67.01%), Postives = 311/385 (80.78%), Query Frame = 1


		  
Query: 2   EENQIERN-KKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPP 61
           E++ ++R   ++  VI+IPSY+EVLE++Q KS  PSLF PS +F+Q F+ +K+SEFY+PP
Sbjct: 9   EDDHLQRRPNRTKTVIKIPSYQEVLESSQSKSAPPSLFTPSPSFSQAFSFLKSSEFYSPP 68

Query: 62  PPPN----TSNSHSFSSSNAASSSSAAPSSSGQNAGSTN----FVQKTNAIIVSQRQKGN 121
           PPP     T    + S+++AA+S+ +   +SG  AGS++      Q  NAI+VS RQKGN
Sbjct: 69  PPPPPPPATPPPPAASAASAAASTWSVAGTSGAVAGSSSKSSFAAQSRNAILVSPRQKGN 128

Query: 122 PLLKHIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVL 181
           PLLKHIRNVRW FA+++ DY++GQNSCALYLSLRYHLLHPDYLY+RIRE+QKN++LRVVL
Sbjct: 129 PLLKHIRNVRWAFADIVCDYLIGQNSCALYLSLRYHLLHPDYLYYRIRELQKNYKLRVVL 188

Query: 182 CHVDVEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSD 241
           CHVDVEDVVKPLLEVT+T LLHDCTLLC WSLEECGRYLETIKVYENKPADIIQG MD+D
Sbjct: 189 CHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTD 248

Query: 242 YLSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFH 301
           YLSRL HALT VRHVNKTDVVTLGSTFGSLSH+MDASMEDLARCPGIGERKV+R+YDTFH
Sbjct: 249 YLSRLTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFH 308

Query: 302 EPFKRVTPN----RSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSALSV 361
           EPFKRV PN      EAPVQ +  P S   +   V+ +  +TSKRQKK+PE+ +KSALS 
Sbjct: 309 EPFKRVVPNVAAAAPEAPVQKNAEPGSISEDQEIVD-DVAQTSKRQKKEPELTVKSALSA 368

Query: 362 AFAKYSDKLSKKNT-PSEKESGEGS 373
           AFAKY+DK+ K+NT P +   GE S
Sbjct: 369 AFAKYADKIGKRNTRPLDGRGGEPS 392

[Close]

BLAST of Spo19376.1 vs. UniProtKB/TrEMBL
Match: A0A061FA79_THECC (DNA excision repair protein ERCC-1 isoform 1 OS=Theobroma cacao GN=TCM_026595 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 8.700e-134
Identity = 260/385 (67.53%), Postives = 311/385 (80.78%), Query Frame = 1


		  
Query: 3   ENQIERN---KKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTP 62
           ENQ E +   +K+ IVI IPSYKEV+E++Q KST PSLF PSQ+F+Q F  IK+SEFY+P
Sbjct: 5   ENQREEHQNKRKTPIVIGIPSYKEVIESSQIKSTPPSLFTPSQSFSQAFNFIKSSEFYSP 64

Query: 63  PPPPNTSNSHSFS-----------SSNAASSSSAAPSSSGQNAGSTNFVQKTNAIIVSQR 122
           PP P   +S + S           SS+AA+++++A +S    + S+N  Q  NAI+VS R
Sbjct: 65  PPAPPAPSSAAISTPRPVGEANVPSSSAAAAAASASASPVAASSSSNSSQSRNAILVSHR 124

Query: 123 QKGNPLLKHIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRL 182
           QKGNPLLKHIRNVRW FA+++ DY+LGQNSCALYLSLRYHLLHPDYLY+RIRE+QKNF+L
Sbjct: 125 QKGNPLLKHIRNVRWAFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKL 184

Query: 183 RVVLCHVDVEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGH 242
           RVVLCHVDVEDVVKPLLEVT+T LLHDCTLLC WSLEECGRYLETIKVYENKPAD+IQG 
Sbjct: 185 RVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQ 244

Query: 243 MDSDYLSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMY 302
           MD+DYLSRLNHALT +RHVNKTDVVTLGSTFG+L+ +MDASMEDLARCPGIGERKVKR+Y
Sbjct: 245 MDTDYLSRLNHALTTIRHVNKTDVVTLGSTFGTLASIMDASMEDLARCPGIGERKVKRLY 304

Query: 303 DTFHEPFKRV---TPNRSEAPVQNDPTPASFDGEPPAVEKETEETSKRQKKDPEVILKSA 362
           DTFHEPFKRV    P   E P+  +  P S   E    EK+TE+TSKR+KK+PE+ +KSA
Sbjct: 305 DTFHEPFKRVISSNPPVPETPILKEAEPCSAS-EATEAEKDTEDTSKRRKKEPEMNVKSA 364

Query: 363 LSVAFAKYSDKLSKKNTPSE-KESG 370
           L+ AFA+Y+ K+SKK+T S+ KE G
Sbjct: 365 LTAAFARYAGKISKKSTKSKGKERG 388

[Close]

BLAST of Spo19376.1 vs. UniProtKB/TrEMBL
Match: M5VZH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006720mg PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.100e-133
Identity = 260/388 (67.01%), Postives = 311/388 (80.15%), Query Frame = 1


		  
Query: 3   ENQIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPPPP 62
           E+   +NKK + VI+IPS++EVLE+ Q KST  SLF PSQ+F+Q FA +K+SEFY+ PPP
Sbjct: 11  ESDQNKNKKKT-VIKIPSFQEVLESAQSKSTPLSLFTPSQSFSQAFAFVKSSEFYSSPPP 70

Query: 63  PNTSNSHSFSSSNAASSS---SAAPSSSGQN---AGSTNFVQKTNAIIVSQRQKGNPLLK 122
           P TS+    +S    SS    S  PSSS      A S++  Q+ NAIIVS RQKGNPLLK
Sbjct: 71  PATSSQPLQASDTGNSSKTGQSDVPSSSAPTNAVASSSSPAQRRNAIIVSHRQKGNPLLK 130

Query: 123 HIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVD 182
           HIRNVRW FA+++ DY+LGQ+SCALYLSLRYHLLHPDYLY+RIRE+QKNF+LRVVLCH+D
Sbjct: 131 HIRNVRWEFADIVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHID 190

Query: 183 VEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSR 242
           VEDVVKPLLEVT+T LLH+CTLLC WSLEECGRYLETIKVYENKPADIIQG MD+DYLSR
Sbjct: 191 VEDVVKPLLEVTKTALLHECTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSR 250

Query: 243 LNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFK 302
           LNHALT VRHVNKTDVVTLG+TFGSLSH+MD SMEDLARCPGIGERKVKR+YDTFHEPFK
Sbjct: 251 LNHALTTVRHVNKTDVVTLGTTFGSLSHIMDVSMEDLARCPGIGERKVKRLYDTFHEPFK 310

Query: 303 RVTPNRSEAPVQNDPT---PASFDGEPPAVEKETEETSKRQKKDPEVILKSALSVAFAKY 362
           RV  +R   P  + P+   P S D E    E ETE+ SKR+KK+PE+ +KSALSVAF+KY
Sbjct: 311 RVVASRPAVPETSAPSNAEPGSVDEEDKEAE-ETEDESKRRKKEPELTVKSALSVAFSKY 370

Query: 363 SDKLSKKNTPSEKESGEGSIIQKESEAD 382
           +DK++KKN+ +++E    +    E+E +
Sbjct: 371 ADKVNKKNSKTQREEKGETSAAMEAETE 396

[Close]

BLAST of Spo19376.1 vs. ExPASy Swiss-Prot
Match: ERCC1_ARATH (DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.400e-129
Identity = 249/393 (63.36%), Postives = 301/393 (76.59%), Query Frame = 1


		  
Query: 5   QIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPPPPPN 64
           QI R  K+ IVI +PSY+EVLE++Q KST PSLF PSQ+F+Q FA +K+S+ Y+PPPP +
Sbjct: 17  QIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSS 76

Query: 65  T--SNSHSFSSSNAASSSSAAPSSSGQNAGST---------NFVQKTNAIIVSQRQKGNP 124
              S+S    +S    SSS    + G ++ ST         N  Q  NAI+VS RQKGNP
Sbjct: 77  AAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNP 136

Query: 125 LLKHIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLC 184
           LLKHIRNV+W F+++IPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRE+QKNF+L VVLC
Sbjct: 137 LLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLC 196

Query: 185 HVDVEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDY 244
           HVDVED VKPLLEVT+T LLHDCTLLCAWS+ EC RYLETIKVYENKPAD+IQG MD+DY
Sbjct: 197 HVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDY 256

Query: 245 LSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHE 304
           LSRLNH+LT++RHVNK+DVVTLGSTFGSL+H++DASMEDLARCPGIGERKVKR+YDTFHE
Sbjct: 257 LSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHE 316

Query: 305 PFKRVT---PNRSEAPVQNDPTPASFDGEPPAVEKE--TEETSKRQKK--DPEVILKSAL 364
           PFKR T   P+  E P+   P     + E P  E E   E++ KR+KK  +PE  +K+AL
Sbjct: 317 PFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKKEPEPEKTVKTAL 376

Query: 365 SVAFAKYSDKLSKKNTPSEKESGEGSIIQKESE 380
           S  FA+YSD+LSKK    EK+  + +    ++E
Sbjct: 377 SAVFARYSDRLSKK---KEKQKEKDTTTASDAE 406

[Close]

BLAST of Spo19376.1 vs. ExPASy Swiss-Prot
Match: ERCC1_MOUSE (DNA excision repair protein ERCC-1 OS=Mus musculus GN=Ercc1 PE=2 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 4.000e-63
Identity = 119/223 (53.36%), Postives = 161/223 (72.20%), Query Frame = 1


		  
Query: 77  ASSSSAAPSSSGQNAGST-NFVQKTNAIIVSQRQKGNPLLKHIRNVRWNFAEVIPDYVLG 136
           A+  + +  ++G+N   T     K+N+IIVS RQ+GNP+LK +RNV W F EVIPDYVLG
Sbjct: 74  ATVPTGSEPAAGENPSQTLKTGAKSNSIIVSPRQRGNPVLKFVRNVPWEFGEVIPDYVLG 133

Query: 137 QNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDVVKPLLEVTRTCLLHD 196
           Q++CAL+LSLRYH LHPDY++ R++ + KNF LRV+L  VDV+D  + L E+ + C+L D
Sbjct: 134 QSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILAD 193

Query: 197 CTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHALTAVRHVNKTDVVTL 256
           CTL+ AWS EE GRYLET K YE KPAD++   ++ ++LSR    LT V+ VNKTD  TL
Sbjct: 194 CTLVLAWSAEEAGRYLETYKAYEQKPADLLMEKLEQNFLSRATECLTTVKSVNKTDSQTL 253

Query: 257 GSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRV 299
            +TFGSL  +  AS EDLA CPG+G +K +R+++  HEPF +V
Sbjct: 254 LATFGSLEQLFTASREDLALCPGLGPQKARRLFEVLHEPFLKV 296

[Close]

BLAST of Spo19376.1 vs. ExPASy Swiss-Prot
Match: ERCC1_HUMAN (DNA excision repair protein ERCC-1 OS=Homo sapiens GN=ERCC1 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.300e-61
Identity = 126/280 (45.00%), Postives = 178/280 (63.57%), Query Frame = 1


		  
Query: 19  PSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPPPPPNTSNSHSFSSSNAAS 78
           P+ K+ +    +    P +  P    TQ+  ++  S    P      + S     + A  
Sbjct: 17  PARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTYAEYAISQPLEGAGATC 76

Query: 79  SSSAAPSSSGQNAGSTNFVQKTNAIIVSQRQKGNPLLKHIRNVRWNFAEVIPDYVLGQNS 138
            + + P +      +     K+N+IIVS RQ+GNP+LK +RNV W F +VIPDYVLGQ++
Sbjct: 77  PTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVPWEFGDVIPDYVLGQST 136

Query: 139 CALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDVVKPLLEVTRTCLLHDCTL 198
           CAL+LSLRYH LHPDY++ R++ + KNF LRV+L  VDV+D  + L E+ + C+L DCTL
Sbjct: 137 CALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTL 196

Query: 199 LCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHALTAVRHVNKTDVVTLGST 258
           + AWS EE GRYLET K YE KPAD++   ++ D++SR+   LT V+ VNKTD  TL +T
Sbjct: 197 ILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTLLTT 256

Query: 259 FGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRV 299
           FGSL  ++ AS EDLA CPG+G +K +R++D  HEPF +V
Sbjct: 257 FGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKV 296

[Close]

BLAST of Spo19376.1 vs. ExPASy Swiss-Prot
Match: ERCC1_BOVIN (DNA excision repair protein ERCC-1 OS=Bos taurus GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.400e-60
Identity = 125/284 (44.01%), Postives = 182/284 (64.08%), Query Frame = 1


		  
Query: 19  PSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPPPPPNTSNSHSFSSSNAAS 78
           P+ K+ L    +    P    P    T++  +++ S    PPP P T   ++ S     +
Sbjct: 13  PTRKKFLIPTDEDVVPPPGAKPLFRSTRSLPTVETS----PPPGPQTYAEYALSGPPGGA 72

Query: 79  SSSAAPSSSGQNAGSTNFVQK----TNAIIVSQRQKGNPLLKHIRNVRWNFAEVIPDYVL 138
            ++           + N   K    +N+IIVS RQ+GNP+L+ +RNV W F +V+PDYVL
Sbjct: 73  EATRPVGPEPLAEETPNQAPKPGAKSNSIIVSPRQRGNPVLRFVRNVPWEFGDVLPDYVL 132

Query: 139 GQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLCHVDVEDVVKPLLEVTRTCLLH 198
           GQ++CAL+LSLRYH LHPDY++ R++ + K++ LRV+L  VDV+D  + L E+ + C+L 
Sbjct: 133 GQSTCALFLSLRYHNLHPDYIHQRLQSLGKSYALRVLLVQVDVKDPQQALKELAKMCILA 192

Query: 199 DCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDYLSRLNHALTAVRHVNKTDVVT 258
           DCTL+ AWS EE GRYLET K YE KPAD++   ++ D++SR+   LT V+ VNKTD  T
Sbjct: 193 DCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQT 252

Query: 259 LGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHEPFKRV 299
           L +TFGSL  ++ AS EDL+ CPG+G +K +R++D FHEPF +V
Sbjct: 253 LLTTFGSLEQLIAASREDLSLCPGLGPQKARRLFDVFHEPFLKV 292

[Close]

BLAST of Spo19376.1 vs. ExPASy Swiss-Prot
Match: SWI10_SCHPO (Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swi10 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.400e-46
Identity = 90/206 (43.69%), Postives = 136/206 (66.02%), Query Frame = 1


		  
Query: 101 NAIIVSQRQKGNPLLKHIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIR 160
           ++I+V+ RQKGNPLL H+RNV W + +++PD+V+G   C+L+LSL+YH LHP+Y+Y RI 
Sbjct: 41  HSILVNPRQKGNPLLPHVRNVPWEYTDIVPDFVMGTGICSLFLSLKYHHLHPEYIYSRIS 100

Query: 161 EMQKNFRLRVVLCHVDVEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENK 220
           ++ K++ LR++L  VDVE+    + E+ +T +++  TL+ AWS EE  RYLET K YEN 
Sbjct: 101 KLGKSYNLRILLILVDVENHQASIQELVKTSIVNQYTLILAWSSEEAARYLETYKAYENM 160

Query: 221 PADIIQGHMDSDYLSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIG 280
              +I     +DYLS++   LT++R +NK+D ++L S FGSL   + AS ++L +  G G
Sbjct: 161 SPALIMEKPSTDYLSQVQSFLTSIRGINKSDSLSLLSKFGSLERALVASRDELEQLEGWG 220

Query: 281 ERKVKRMYDTFHEPF-KRVTPNRSEA 306
             KV R  +   +PF    T  R EA
Sbjct: 221 PTKVNRFLEAVQQPFMSHSTIKRPEA 246

[Close]

BLAST of Spo19376.1 vs. TAIR (Arabidopsis)
Match: AT3G05210.1 (nucleotide repair protein, putative)

HSP 1 Score: 464.2 bits (1193), Expect = 8.100e-131
Identity = 249/393 (63.36%), Postives = 301/393 (76.59%), Query Frame = 1


		  
Query: 5   QIERNKKSSIVIEIPSYKEVLENNQQKSTQPSLFIPSQTFTQTFASIKNSEFYTPPPPPN 64
           QI R  K+ IVI +PSY+EVLE++Q KST PSLF PSQ+F+Q FA +K+S+ Y+PPPP +
Sbjct: 17  QIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSS 76

Query: 65  T--SNSHSFSSSNAASSSSAAPSSSGQNAGST---------NFVQKTNAIIVSQRQKGNP 124
              S+S    +S    SSS    + G ++ ST         N  Q  NAI+VS RQKGNP
Sbjct: 77  AAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNP 136

Query: 125 LLKHIRNVRWNFAEVIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIREMQKNFRLRVVLC 184
           LLKHIRNV+W F+++IPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRE+QKNF+L VVLC
Sbjct: 137 LLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLC 196

Query: 185 HVDVEDVVKPLLEVTRTCLLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGHMDSDY 244
           HVDVED VKPLLEVT+T LLHDCTLLCAWS+ EC RYLETIKVYENKPAD+IQG MD+DY
Sbjct: 197 HVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDY 256

Query: 245 LSRLNHALTAVRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRMYDTFHE 304
           LSRLNH+LT++RHVNK+DVVTLGSTFGSL+H++DASMEDLARCPGIGERKVKR+YDTFHE
Sbjct: 257 LSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHE 316

Query: 305 PFKRVT---PNRSEAPVQNDPTPASFDGEPPAVEKE--TEETSKRQKK--DPEVILKSAL 364
           PFKR T   P+  E P+   P     + E P  E E   E++ KR+KK  +PE  +K+AL
Sbjct: 317 PFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKKEPEPEKTVKTAL 376

Query: 365 SVAFAKYSDKLSKKNTPSEKESGEGSIIQKESE 380
           S  FA+YSD+LSKK    EK+  + +    ++E
Sbjct: 377 SAVFARYSDRLSKK---KEKQKEKDTTTASDAE 406

The following BLAST results are available for this feature:

BLAST of Spo19376.1 vs. NCBI nr
BLAST of Spo19376.1 vs. UniProtKB/TrEMBL
BLAST of Spo19376.1 vs. ExPASy Swiss-Prot
BLAST of Spo19376.1 vs. TAIR (Arabidopsis)

BLAST of Spo19376.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902192315\|gb\|KNA12015.1\|	1.1e-211	100.	hypothetical protein SOVF_1296...	[more]
gi\|731366404\|ref\|XP_010695052.1\|	3.9e-167	81.0	PREDICTED: DNA excision repair...	[more]
gi\|645222268\|ref\|XP_008246509.1\|	5.1e-135	67.2	PREDICTED: DNA excision repair...	[more]
gi\|702448750\|ref\|XP_010025163.1\|	5.6e-134	67.0	PREDICTED: DNA excision repair...	[more]
gi\|590643818\|ref\|XP_007030907.1\|	1.3e-133	67.5	DNA excision repair protein ER...	[more]

BLAST of Spo19376.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QXN3_SPIOL	8.0e-212	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8E498_BETVU	2.7e-167	81.0	Uncharacterized protein OS=Bet...	[more]
A0A059B7W6_EUCGR	3.9e-134	67.0	Uncharacterized protein OS=Euc...	[more]
A0A061FA79_THECC	8.7e-134	67.5	DNA excision repair protein ER...	[more]
M5VZH2_PRUPE	1.1e-133	67.0	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo19376.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ERCC1_ARATH	1.4e-129	63.3	DNA excision repair protein ER...	[more]
ERCC1_MOUSE	4.0e-63	53.3	DNA excision repair protein ER...	[more]
ERCC1_HUMAN	1.3e-61	45.0	DNA excision repair protein ER...	[more]
ERCC1_BOVIN	1.4e-60	44.0	DNA excision repair protein ER...	[more]
SWI10_SCHPO	4.4e-46	43.6	Mating-type switching protein ...	[more]

BLAST of Spo19376.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G05210.1	8.1e-131	63.3	nucleotide repair protein, put...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004579	ERCC1/RAD10/SWI10 family	PRODOM	PD013585		coord: 101..225 score: 3.0
IPR004579	ERCC1/RAD10/SWI10 family	TIGRFAMs	TIGR00597	TIGR00597	coord: 101..212 score: 6.8
IPR010994	RuvA domain 2-like	unknown	SSF47781	RuvA domain 2-like	coord: 224..295 score: 9.85
IPR011335	Restriction endonuclease type II-like	unknown	SSF52980	Restriction endonuclease-like	coord: 101..227 score: 7.51
None	No IPR available	GENE3D	1.10.150.20		coord: 241..293 score: 3.1
None	No IPR available	PANTHER	PTHR12749	EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1	coord: 1..355 score: 8.7E
None	No IPR available	PANTHER	PTHR12749:SF0	DNA EXCISION REPAIR PROTEIN ERCC-1	coord: 1..355 score: 8.7E
None	No IPR available	PFAM	PF03834	Rad10	coord: 103..215 score: 6.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000737	DNA catabolic process, endonucleolytic
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006281	DNA repair
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006189	'de novo' IMP biosynthetic process
biological_process	GO:0044208	'de novo' AMP biosynthetic process
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0010224	response to UV-B
biological_process	GO:0010332	response to gamma radiation
biological_process	GO:0006294	nucleotide-excision repair, preincision complex assembly
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0010213	non-photoreactive DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0017108	5'-flap endonuclease activity
molecular_function	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
molecular_function	GO:0070626	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004639	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
molecular_function	GO:0004519	endonuclease activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10009	0.68	Barchart \| Table
Spo10434	0.66	Barchart \| Table