Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAATTCTGGATTGTGCCAACTGCCAAGCTAAGTGAAACAGAACCAATAAATGTGACATAACGACGATGGGTCCATTACTCCATTGTCCATAATACCATATGTATAAGTTCTCCCATTACGCAACGTAAGTGTACACCGTTATTACGAATCAAATAAATTCCTAACCACATGCACTAGAAACTAGAAAGTCAATAAGAGAGATAGAGATAGAGATAGTGTTAGGGATATAGATAGAATGGGAGACGACAACAACTCCTGCACGAAACATTTTGTGCTAGTTCATGGGGCATGCCATGGAGCATGGTGTTGGTACAAGGTTAAGCCCCTGATTGAGGCCGCCGGTCATCACGTGACACCGCTCGACATGGCGGCCTCGGGGATCAACCTGAAAAAGATCGATGAAATCCAAACACTTAAAGAATACACAGAGCCGTTGATTCAGTTTTTGACAGCTCTACCTGATGATCAGAAGGTCATACTTGTTGGGCATAGCCTTGGAGGATTCAATATAGCCATGGCTATGGAAATGTTCCCTCTAAAGATTGAAACTGCTGTTTTTCTAACGGCATTTATGCCTGACCATGTCCATACTCCTTCCTTCATCTTTGATCAGGTAATTTACGTTTATTAAAAAATAAAATAGGAATGTATTGAACGCTTGTAGTTAAAAATTGAAAATTTGACATTCTCATTTGCACGTAGTAATACTCATACTTGTTAGTGTTCCGGGTAATATCCCTAAATGTTGCATATAATTTAAGTTTATTTTATTCATTTTTAATTCACTCATAAGTTTCTTTATGCATGCATTTATAAAATGAGTAATTTCTCTCCGCTTTCAACTCCATGTTAAGTTCTCCCAATAAGAAATTGGTTTTCCATTTGGTGTTCATTAACACCAATTCTTGGTTGGTTTCATTATCTCTGTTCATTTCTCTCTTATCTTTCTACCTCTTTTATAATTTTTTATTCACTTCTCTCCCTTGAACACCAAGAAATTGGTGTTTGATAAACATGTTCTTAAAGTATATAGTATATTTTTGAAAATTTCAGAGGTATATATACGAATTAAGTTAAGTTCATGGGTATATGGTGAAAAAACCGTAATAAAATTGAGTAATTTCTTTAATGGTGTAGTTCATTGCAAAAAAGGGTGATGGAGTCAAAGATTTTTGGATGGACACCGAGTTCAAGAGCTCCGGTGATCCAAATGAGACCCCGACGACAATGTTATTCGGTCCACAGTTCATGGCAAAGCTGTATCATTTGTCTCCCCTTGAGGTAATTCTTTTTTTTTTTTTTTAAATGCACCACTTGCTTCTTAATGAGTATTTCTTTTCAAATGCGTCAATTCCACATCTAATAATTTGTAATTTAAACCTACTTAAATTTTGGATAACTTGCAATTTTGCAAATTTATACCTACTGACCAAGTTACATTAGTAATTACATTAACTTAGTATTACCTCCATTTTAAAATGATTTTTACACTTTTTATTTTAATTTGTTTCATAATATTTTTTGCACTATGCTTTATTCTATTTGTGAATATGAATTTTTATTGTCTTACCCTCTTAAACCACAATATTTACAACTTTTCACTCACTTTCTCTTACTTTATTCATTTTTTTTTTACACTCACCCCTTTTTAACCATCTACATACTTTATCCATATTTTATTGTATTCAACCATATTTTTACATAATTTTCCCTATTTTATTTTAATATGTACAAATAGTAACCGTAAAGATCATTTTGAAACGGAATTCTGTAATGCCACTTGATTCTAATTGATGGAATGTTATAAGGATTTGGAGCTAGGTATGACATTGAAAAGGCCATCGTCGATGTTCGTTCATGATACATCGAAGCCAGAGGCGAAGCTTTCAAAGGAGAGATATGGAACGGTAAAAAGTGTTTTTGTGATATGCGAAGAAGATCAAGGGATATCCCAAGCTTTTCAACAATGGATGACTGAAAATAATGGGTTGAAAGAGGTGAAGAAGCTTAAAGGCTCGGATCATATGCCTATGCTTTGTATGCCTAAACAACTTTCTATTTGTCTTCTGGAAATAGCCCACACTTTCCAGGACTGATACTCGCTCAAACCATTGTTAAAAGTGACAACCCGAAGTCATTGTTCGGCAAAAATCACCGAAAGATACTGTCATAATGTTACAAAATAAAAATCACATAATTTCTATTAAACAAAATAAATCGAAAAATAAGAACTAAAAAAAAATCGGAAAATAATTTTGTTTTATAGATATTACGTAATTGTTTATTTTAATAACATTATGGCATTATATTCGAATGATTTTTGCCGGAAAATGATTTCAGGTTAAAATTTAAAATGGATGTATAAGTTTAAATTGTATTTGGCAAAATTAGAACTTTGTGGTTATAATTAGCAAATAAGGAACGTTATTATTAGGTTGTATTTGTCAAATTTACCTTCTCTAAAAGTACCATCGTTGCATATCAAACATTTTATATACCCTATTTACATCAATGTATTTTGCAGTCTTTTTCAGCAAAGAAGTCTACGGATCTGCCGTAGCCGTGAAGATAATTTCTTTATGATTCGATCATTAAATTGTAGTCGAAAAATAACATATTTTTCGATCCCGCATAAATCTTAATTTATCACCGTCTACCCGAGTATGGGCAATGAATCATAGTCCTCAAATTACCAAAAATAGTTGTTGATTTTGTAATATCACAATTAATTGATCCGACAGTAGTCCCACTTGCTTTAATAGCCTACGCACTTACGCACTTACGCACTTTGCACTTAGCAGCATCTCCAGCAGAGTCTGGCAAGTGGCAACCAGTTTAGATTTTAGGGTATGGTCACATTTTCCGAATGCCGACATGTAAATAAGGGGAGACTCTTATCTTG TTAATTCTGGATTGTGCCAACTGCCAAGCTAAGTGAAACAGAACCAATAAATGTGACATAACGACGATGGGTCCATTACTCCATTGTCCATAATACCATATGTATAAGTTCTCCCATTACGCAACGTAAGTGTACACCGTTATTACGAATCAAATAAATTCCTAACCACATGCACTAGAAACTAGAAAGTCAATAAGAGAGATAGAGATAGAGATAGTGTTAGGGATATAGATAGAATGGGAGACGACAACAACTCCTGCACGAAACATTTTGTGCTAGTTCATGGGGCATGCCATGGAGCATGGTGTTGGTACAAGGTTAAGCCCCTGATTGAGGCCGCCGGTCATCACGTGACACCGCTCGACATGGCGGCCTCGGGGATCAACCTGAAAAAGATCGATGAAATCCAAACACTTAAAGAATACACAGAGCCGTTGATTCAGTTTTTGACAGCTCTACCTGATGATCAGAAGGTCATACTTGTTGGGCATAGCCTTGGAGGATTCAATATAGCCATGGCTATGGAAATGTTCCCTCTAAAGATTGAAACTGCTGTTTTTCTAACGGCATTTATGCCTGACCATGTCCATACTCCTTCCTTCATCTTTGATCAGTTCATTGCAAAAAAGGGTGATGGAGTCAAAGATTTTTGGATGGACACCGAGTTCAAGAGCTCCGGTGATCCAAATGAGACCCCGACGACAATGTTATTCGGTCCACAGTTCATGGCAAAGCTGTATCATTTGTCTCCCCTTGAGGATTTGGAGCTAGGTATGACATTGAAAAGGCCATCGTCGATGTTCGTTCATGATACATCGAAGCCAGAGGCGAAGCTTTCAAAGGAGAGATATGGAACGGTAAAAAGTGTTTTTGTGATATGCGAAGAAGATCAAGGGATATCCCAAGCTTTTCAACAATGGATGACTGAAAATAATGGGTTGAAAGAGGTGAAGAAGCTTAAAGGCTCGGATCATATGCCTATGCTTTGTATGCCTAAACAACTTTCTATTTGTCTTCTGGAAATAGCCCACACTTTCCAGGACTGATACTCGCTCAAACCATTGTTAAAAGTGACAACCCGAAGTCATTGTTCGGCAAAAATCACCGAAAGATACTGTCATAATGTTACAAAATAAAAATCACATAATTTCTATTAAACAAAATAAATCGAAAAATAAGAACTAAAAAAAAATCGGAAAATAATTTTGTTTTATAGATATTACGTAATTGTTTATTTTAATAACATTATGGCATTATATTCGAATGATTTTTGCCGGAAAATGATTTCAGGTTAAAATTTAAAATGGATGTATAAGTTTAAATTGTATTTGGCAAAATTAGAACTTTGTGGTTATAATTAGCAAATAAGGAACGTTATTATTAGGTTGTATTTGTCAAATTTACCTTCTCTAAAAGTACCATCGTTGCATATCAAACATTTTATATACCCTATTTACATCAATGTATTTTGCAGTCTTTTTCAGCAAAGAAGTCTACGGATCTGCCGTAGCCGTGAAGATAATTTCTTTATGATTCGATCATTAAATTGTAGTCGAAAAATAACATATTTTTCGATCCCGCATAAATCTTAATTTATCACCGTCTACCCGAGTATGGGCAATGAATCATAGTCCTCAAATTACCAAAAATAGTTGTTGATTTTGTAATATCACAATTAATTGATCCGACAGTAGTCCCACTTGCTTTAATAGCCTACGCACTTACGCACTTACGCACTTTGCACTTAGCAGCATCTCCAGCAGAGTCTGGCAAGTGGCAACCAGTTTAGATTTTAGGGTATGGTCACATTTTCCGAATGCCGACATGTAAATAAGGGGAGACTCTTATCTTG ATGGGAGACGACAACAACTCCTGCACGAAACATTTTGTGCTAGTTCATGGGGCATGCCATGGAGCATGGTGTTGGTACAAGGTTAAGCCCCTGATTGAGGCCGCCGGTCATCACGTGACACCGCTCGACATGGCGGCCTCGGGGATCAACCTGAAAAAGATCGATGAAATCCAAACACTTAAAGAATACACAGAGCCGTTGATTCAGTTTTTGACAGCTCTACCTGATGATCAGAAGGTCATACTTGTTGGGCATAGCCTTGGAGGATTCAATATAGCCATGGCTATGGAAATGTTCCCTCTAAAGATTGAAACTGCTGTTTTTCTAACGGCATTTATGCCTGACCATGTCCATACTCCTTCCTTCATCTTTGATCAGTTCATTGCAAAAAAGGGTGATGGAGTCAAAGATTTTTGGATGGACACCGAGTTCAAGAGCTCCGGTGATCCAAATGAGACCCCGACGACAATGTTATTCGGTCCACAGTTCATGGCAAAGCTGTATCATTTGTCTCCCCTTGAGGATTTGGAGCTAGGTATGACATTGAAAAGGCCATCGTCGATGTTCGTTCATGATACATCGAAGCCAGAGGCGAAGCTTTCAAAGGAGAGATATGGAACGGTAAAAAGTGTTTTTGTGATATGCGAAGAAGATCAAGGGATATCCCAAGCTTTTCAACAATGGATGACTGAAAATAATGGGTTGAAAGAGGTGAAGAAGCTTAAAGGCTCGGATCATATGCCTATGCTTTGTATGCCTAAACAACTTTCTATTTGTCTTCTGGAAATAGCCCACACTTTCCAGGACTGA MGDDNNSCTKHFVLVHGACHGAWCWYKVKPLIEAAGHHVTPLDMAASGINLKKIDEIQTLKEYTEPLIQFLTALPDDQKVILVGHSLGGFNIAMAMEMFPLKIETAVFLTAFMPDHVHTPSFIFDQFIAKKGDGVKDFWMDTEFKSSGDPNETPTTMLFGPQFMAKLYHLSPLEDLELGMTLKRPSSMFVHDTSKPEAKLSKERYGTVKSVFVICEEDQGISQAFQQWMTENNGLKEVKKLKGSDHMPMLCMPKQLSICLLEIAHTFQD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19228.1 vs. NCBI nr
Match: gi|902223053|gb|KNA19362.1| (hypothetical protein SOVF_062120 [Spinacia oleracea]) HSP 1 Score: 410.6 bits (1054), Expect = 2.100e-111 Identity = 189/234 (80.77%), Postives = 211/234 (90.17%), Query Frame = 1
BLAST of Spo19228.1 vs. NCBI nr
Match: gi|731338711|ref|XP_010680459.1| (PREDICTED: salicylic acid-binding protein 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 406.0 bits (1042), Expect = 5.200e-110 Identity = 193/264 (73.11%), Postives = 227/264 (85.98%), Query Frame = 1
BLAST of Spo19228.1 vs. NCBI nr
Match: gi|870855326|gb|KMT07059.1| (hypothetical protein BVRB_6g153880 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 370.5 bits (950), Expect = 2.400e-99 Identity = 172/261 (65.90%), Postives = 214/261 (81.99%), Query Frame = 1
BLAST of Spo19228.1 vs. NCBI nr
Match: gi|731344012|ref|XP_010683183.1| (PREDICTED: salicylic acid-binding protein 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 370.5 bits (950), Expect = 2.400e-99 Identity = 172/261 (65.90%), Postives = 214/261 (81.99%), Query Frame = 1
BLAST of Spo19228.1 vs. NCBI nr
Match: gi|902042979|gb|KNA02788.1| (hypothetical protein SOVF_215370, partial [Spinacia oleracea]) HSP 1 Score: 369.8 bits (948), Expect = 4.100e-99 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Spo19228.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKI8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_062120 PE=4 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 1.500e-111 Identity = 189/234 (80.77%), Postives = 211/234 (90.17%), Query Frame = 1
BLAST of Spo19228.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C6K6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g134710 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 3.600e-110 Identity = 193/264 (73.11%), Postives = 227/264 (85.98%), Query Frame = 1
BLAST of Spo19228.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4D2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153880 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 1.700e-99 Identity = 172/261 (65.90%), Postives = 214/261 (81.99%), Query Frame = 1
BLAST of Spo19228.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7V5_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_215370 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 2.900e-99 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of Spo19228.1 vs. UniProtKB/TrEMBL
Match: D7SSD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0253g00140 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 1.000e-80 Identity = 144/260 (55.38%), Postives = 196/260 (75.38%), Query Frame = 1
BLAST of Spo19228.1 vs. ExPASy Swiss-Prot
Match: SABP2_TOBAC (Salicylic acid-binding protein 2 OS=Nicotiana tabacum GN=SABP2 PE=1 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 6.800e-78 Identity = 140/259 (54.05%), Postives = 188/259 (72.59%), Query Frame = 1
BLAST of Spo19228.1 vs. ExPASy Swiss-Prot
Match: MES1_ARATH (Methylesterase 1 OS=Arabidopsis thaliana GN=MES1 PE=1 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 9.200e-75 Identity = 139/260 (53.46%), Postives = 187/260 (71.92%), Query Frame = 1
BLAST of Spo19228.1 vs. ExPASy Swiss-Prot
Match: MES2_ARATH (Methylesterase 2 OS=Arabidopsis thaliana GN=MES2 PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 6.200e-71 Identity = 132/260 (50.77%), Postives = 186/260 (71.54%), Query Frame = 1
BLAST of Spo19228.1 vs. ExPASy Swiss-Prot
Match: MES3_ARATH (Methylesterase 3 OS=Arabidopsis thaliana GN=MES3 PE=2 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 8.400e-68 Identity = 128/260 (49.23%), Postives = 184/260 (70.77%), Query Frame = 1
BLAST of Spo19228.1 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.600e-66 Identity = 117/256 (45.70%), Postives = 178/256 (69.53%), Query Frame = 1
BLAST of Spo19228.1 vs. TAIR (Arabidopsis)
Match: AT2G23620.1 (methyl esterase 1) HSP 1 Score: 281.6 bits (719), Expect = 5.200e-76 Identity = 139/260 (53.46%), Postives = 187/260 (71.92%), Query Frame = 1
BLAST of Spo19228.1 vs. TAIR (Arabidopsis)
Match: AT2G23600.1 (acetone-cyanohydrin lyase) HSP 1 Score: 268.9 bits (686), Expect = 3.500e-72 Identity = 132/260 (50.77%), Postives = 186/260 (71.54%), Query Frame = 1
BLAST of Spo19228.1 vs. TAIR (Arabidopsis)
Match: AT2G23610.1 (methyl esterase 3) HSP 1 Score: 258.5 bits (659), Expect = 4.700e-69 Identity = 128/260 (49.23%), Postives = 184/260 (70.77%), Query Frame = 1
BLAST of Spo19228.1 vs. TAIR (Arabidopsis)
Match: AT2G23560.1 (methyl esterase 7) HSP 1 Score: 245.4 bits (625), Expect = 4.100e-65 Identity = 125/267 (46.82%), Postives = 177/267 (66.29%), Query Frame = 1
BLAST of Spo19228.1 vs. TAIR (Arabidopsis)
Match: AT4G37150.1 (methyl esterase 9) HSP 1 Score: 245.4 bits (625), Expect = 4.100e-65 Identity = 113/258 (43.80%), Postives = 171/258 (66.28%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19228.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19228.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19228.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19228.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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